AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93688


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93688.t1 MTR_7g067330 91.011 356 29 1 1 356 82 434 0.0 664
MS.gene93688.t1 MTR_7g067120 85.674 356 48 1 1 356 82 434 0.0 625
MS.gene93688.t1 MTR_4g123553 39.578 379 193 8 2 350 88 460 1.42e-83 261
MS.gene93688.t1 MTR_2g008220 39.037 374 196 6 1 344 87 458 2.66e-83 261
MS.gene93688.t1 MTR_2g008226 39.119 386 197 8 1 350 86 469 3.01e-83 261
MS.gene93688.t1 MTR_2g046620 38.564 376 203 6 1 350 88 461 5.31e-83 260
MS.gene93688.t1 MTR_2g008225 38.503 374 198 6 1 344 88 459 1.30e-82 259
MS.gene93688.t1 MTR_8g068330 37.696 382 201 7 2 348 82 461 4.88e-82 257
MS.gene93688.t1 MTR_6g036650 39.362 376 194 6 1 344 91 464 5.86e-82 257
MS.gene93688.t1 MTR_4g077960 37.701 374 195 6 2 344 65 431 5.41e-81 254
MS.gene93688.t1 MTR_8g068340 37.468 387 197 7 2 349 86 466 4.74e-80 252
MS.gene93688.t1 MTR_8g068360 36.649 382 202 7 2 347 86 463 2.68e-79 250
MS.gene93688.t1 MTR_6g042310 38.275 371 197 8 2 344 91 457 1.30e-74 238
MS.gene93688.t1 MTR_3g435310 36.782 348 190 6 2 344 91 413 2.54e-68 221
MS.gene93688.t1 MTR_8g007565 35.659 387 205 8 1 348 82 463 1.70e-63 209
MS.gene93688.t1 MTR_8g007650 35.659 387 205 8 1 348 82 463 3.25e-63 209
MS.gene93688.t1 MTR_5g066410 35.809 377 203 8 1 348 73 439 7.17e-63 207
MS.gene93688.t1 MTR_1g090270 31.026 390 209 12 2 344 82 458 4.81e-50 174
MS.gene93688.t1 MTR_4g079250 31.169 385 217 13 2 348 81 455 2.67e-46 164
MS.gene93688.t1 MTR_4g079270 31.481 378 217 13 2 344 81 451 1.77e-45 162
MS.gene93688.t1 MTR_2g014900 29.716 387 219 14 2 348 80 453 2.94e-44 158
MS.gene93688.t1 MTR_4g485630 29.500 400 212 11 4 348 87 471 2.19e-41 151
MS.gene93688.t1 MTR_1g029540 32.661 248 148 5 119 347 212 459 1.13e-39 146
MS.gene93688.t1 MTR_0536s0020 30.352 369 207 13 11 336 99 460 1.95e-39 146
MS.gene93688.t1 MTR_2g083430 30.233 387 218 12 2 348 81 455 6.08e-39 144
MS.gene93688.t1 MTR_4g008630 33.065 248 146 6 119 347 216 462 1.56e-38 143
MS.gene93688.t1 MTR_6g488280 35.102 245 132 5 102 327 204 440 4.61e-38 142
MS.gene93688.t1 MTR_0428s0010 35.102 245 132 5 102 327 204 440 4.61e-38 142
MS.gene93688.t1 MTR_6g023665 33.591 259 145 6 89 327 196 447 5.20e-38 142
MS.gene93688.t1 MTR_4g117960 29.640 361 203 11 18 333 104 458 7.92e-37 139
MS.gene93688.t1 MTR_4g117890 29.444 360 206 14 18 336 103 455 1.03e-36 138
MS.gene93688.t1 MTR_8g009055 37.705 244 126 7 105 326 202 441 1.07e-36 138
MS.gene93688.t1 MTR_7g070860 32.081 346 188 11 18 326 102 437 2.44e-36 137
MS.gene93688.t1 MTR_8g066610 31.436 369 200 12 8 328 94 457 4.91e-36 137
MS.gene93688.t1 MTR_8g009050 36.626 243 124 8 108 326 205 441 1.01e-35 135
MS.gene93688.t1 MTR_0078s0060 32.411 253 149 5 89 322 186 435 1.18e-35 135
MS.gene93688.t1 MTR_8g008990 37.295 244 123 8 108 326 205 443 1.88e-35 135
MS.gene93688.t1 MTR_4g059370 31.939 263 151 8 100 344 133 385 1.94e-35 133
MS.gene93688.t1 MTR_4g485620 31.165 369 208 11 3 329 68 432 1.94e-35 134
MS.gene93688.t1 MTR_0184s0040 34.894 235 128 6 109 322 221 451 2.35e-35 135
MS.gene93688.t1 MTR_0078s0190 34.894 235 128 6 109 322 221 451 2.35e-35 135
MS.gene93688.t1 MTR_5g019580 33.835 266 139 8 101 335 202 461 2.63e-35 135
MS.gene93688.t1 MTR_2g083480 30.423 378 221 13 2 344 81 451 3.84e-35 134
MS.gene93688.t1 MTR_5g019580 33.835 266 139 8 101 335 226 485 3.86e-35 134
MS.gene93688.t1 MTR_8g012745 37.264 212 111 5 138 329 237 446 4.50e-35 134
MS.gene93688.t1 MTR_2g083490 30.390 385 220 14 2 348 81 455 9.56e-35 132
MS.gene93688.t1 MTR_7g070800 33.121 314 165 9 18 290 101 410 9.67e-35 133
MS.gene93688.t1 MTR_4g117980 28.889 360 208 12 18 333 104 459 1.14e-34 133
MS.gene93688.t1 MTR_2g035020 30.055 366 202 13 18 336 104 462 1.40e-34 133
MS.gene93688.t1 MTR_4g117950 29.661 354 207 12 18 332 93 443 1.62e-34 132
MS.gene93688.t1 MTR_7g047030 34.959 246 130 8 100 322 198 436 3.33e-34 131
MS.gene93688.t1 MTR_7g047270 34.959 246 130 8 100 322 198 436 3.33e-34 131
MS.gene93688.t1 MTR_1g019510 33.871 248 136 9 100 326 198 438 1.25e-33 130
MS.gene93688.t1 MTR_0078s0010 33.473 239 134 6 105 322 202 436 1.59e-33 129
MS.gene93688.t1 MTR_8g009063 34.524 252 133 7 103 329 207 451 1.79e-33 129
MS.gene93688.t1 MTR_7g046490 35.968 253 129 9 94 322 191 434 3.02e-33 129
MS.gene93688.t1 MTR_8g009067 33.051 236 138 4 109 326 88 321 3.43e-33 126
MS.gene93688.t1 MTR_2g083380 30.130 385 221 12 2 348 98 472 3.80e-33 128
MS.gene93688.t1 MTR_8g006730 32.319 263 150 7 86 327 187 442 4.36e-33 128
MS.gene93688.t1 MTR_6g005600 32.210 267 152 5 88 332 186 445 4.93e-33 128
MS.gene93688.t1 MTR_8g090095 31.076 251 150 5 119 347 230 479 5.89e-33 128
MS.gene93688.t1 MTR_8g009067 33.051 236 138 4 109 326 206 439 8.17e-33 127
MS.gene93688.t1 MTR_2g083390 27.493 371 217 11 2 344 81 427 8.74e-33 127
MS.gene93688.t1 MTR_1g019520 39.037 187 91 4 160 326 4 187 1.32e-32 121
MS.gene93688.t1 MTR_6g013990 41.808 177 87 5 160 328 286 454 1.42e-32 127
MS.gene93688.t1 MTR_6g014270 40.909 176 90 4 160 328 287 455 1.48e-32 127
MS.gene93688.t1 MTR_8g012635 35.498 231 117 6 121 326 223 446 1.51e-32 127
MS.gene93688.t1 MTR_3g008010 37.264 212 106 6 135 328 252 454 1.66e-32 127
MS.gene93688.t1 MTR_8g009073 36.788 193 102 4 152 326 120 310 3.18e-32 124
MS.gene93688.t1 MTR_8g077590 37.629 194 98 4 152 326 252 441 3.23e-32 126
MS.gene93688.t1 MTR_6g014190 38.068 176 95 4 160 328 95 263 5.38e-32 122
MS.gene93688.t1 MTR_8g008970 33.191 235 137 4 109 325 206 438 6.04e-32 127
MS.gene93688.t1 MTR_8g008970 30.921 304 175 11 50 329 474 766 1.89e-26 111
MS.gene93688.t1 MTR_2g034990 29.477 363 202 13 18 333 104 459 6.94e-32 125
MS.gene93688.t1 MTR_8g009073 36.041 197 106 4 148 326 245 439 7.30e-32 125
MS.gene93688.t1 MTR_4g031800 33.216 283 152 10 100 347 192 472 8.19e-32 125
MS.gene93688.t1 MTR_0184s0030 34.167 240 132 5 108 326 208 442 1.00e-31 124
MS.gene93688.t1 MTR_8g012630 38.095 189 93 5 160 326 204 390 1.16e-31 124
MS.gene93688.t1 MTR_8g027885 34.661 251 132 7 108 334 215 457 1.17e-31 124
MS.gene93688.t1 MTR_4g118000 28.406 345 207 14 18 327 103 442 1.29e-31 124
MS.gene93688.t1 MTR_7g117170 32.130 277 152 9 97 344 203 472 1.50e-31 124
MS.gene93688.t1 MTR_6g011340 40.341 176 91 4 160 328 288 456 1.58e-31 124
MS.gene93688.t1 MTR_6g014050 38.636 176 94 4 160 328 289 457 1.68e-31 124
MS.gene93688.t1 MTR_6g013920 40.625 192 97 5 144 328 274 455 1.76e-31 124
MS.gene93688.t1 MTR_8g027870 34.568 243 128 6 119 334 219 457 2.66e-31 123
MS.gene93688.t1 MTR_7g070610 28.796 382 201 12 5 328 95 463 2.77e-31 124
MS.gene93688.t1 MTR_5g058320 40.909 176 90 4 160 328 273 441 3.22e-31 123
MS.gene93688.t1 MTR_6g014220 39.205 176 93 4 160 328 286 454 3.28e-31 123
MS.gene93688.t1 MTR_6g014310 39.062 192 100 6 144 328 276 457 3.74e-31 123
MS.gene93688.t1 MTR_6g014200 41.477 176 89 5 160 328 285 453 3.88e-31 123
MS.gene93688.t1 MTR_0288s0020 40.341 176 91 5 160 328 269 437 4.28e-31 122
MS.gene93688.t1 MTR_5g045960 30.495 364 204 13 14 329 100 462 5.72e-31 122
MS.gene93688.t1 MTR_8g006710 32.900 231 127 6 118 327 218 441 5.85e-31 122
MS.gene93688.t1 MTR_6g013440 38.636 176 94 5 160 328 289 457 5.96e-31 122
MS.gene93688.t1 MTR_7g080935 26.685 371 236 11 10 347 82 449 6.44e-31 122
MS.gene93688.t1 MTR_7g055710 28.492 358 202 10 18 326 106 458 7.10e-31 122
MS.gene93688.t1 MTR_5g040030 30.343 379 205 15 2 328 93 464 7.96e-31 122
MS.gene93688.t1 MTR_5g045970 28.418 373 216 11 14 337 107 477 8.97e-31 122
MS.gene93688.t1 MTR_6g038230 27.401 354 210 13 10 325 84 428 9.49e-31 122
MS.gene93688.t1 MTR_8g007585 38.983 177 94 4 159 328 199 368 1.06e-30 120
MS.gene93688.t1 MTR_8g071070 28.042 378 226 13 13 348 96 469 1.18e-30 122
MS.gene93688.t1 MTR_6g038200 27.647 340 200 13 28 332 107 435 1.32e-30 121
MS.gene93688.t1 MTR_6g038220 28.363 342 204 12 19 325 92 427 1.57e-30 121
MS.gene93688.t1 MTR_5g087620 25.686 401 241 10 3 347 94 493 1.58e-30 121
MS.gene93688.t1 MTR_6g014020 39.773 176 92 4 160 328 288 456 1.99e-30 121
MS.gene93688.t1 MTR_1g107360 36.548 197 115 4 158 347 268 461 2.31e-30 120
MS.gene93688.t1 MTR_6g035185 27.809 356 212 11 18 328 104 459 2.32e-30 121
MS.gene93688.t1 MTR_6g014187 39.205 176 93 4 160 328 288 456 2.42e-30 121
MS.gene93688.t1 MTR_8g012730 34.653 202 104 5 149 326 86 283 2.47e-30 118
MS.gene93688.t1 MTR_1g107285 33.071 254 139 9 118 350 223 466 2.47e-30 120
MS.gene93688.t1 MTR_1g107350 36.275 204 106 5 159 344 268 465 3.17e-30 120
MS.gene93688.t1 MTR_6g013450 39.205 176 93 4 160 328 289 457 3.63e-30 120
MS.gene93688.t1 MTR_2g035040 28.490 351 193 12 32 333 23 364 3.69e-30 119
MS.gene93688.t1 MTR_7g012120 27.401 354 212 11 18 328 109 460 3.95e-30 120
MS.gene93688.t1 MTR_7g070740 28.650 363 191 12 11 318 99 448 5.04e-30 120
MS.gene93688.t1 MTR_8g012650 34.199 231 120 7 121 326 223 446 6.02e-30 119
MS.gene93688.t1 MTR_8g028755 34.661 251 124 10 73 323 23 233 6.14e-30 115
MS.gene93688.t1 MTR_8g059425 39.205 176 93 4 160 328 286 454 6.44e-30 119
MS.gene93688.t1 MTR_4g094220 36.788 193 104 6 144 328 273 455 6.58e-30 119
MS.gene93688.t1 MTR_7g070660 28.571 364 198 13 18 332 106 456 6.85e-30 119
MS.gene93688.t1 MTR_4g128690 35.747 221 122 7 135 349 245 451 7.12e-30 119
MS.gene93688.t1 MTR_7g117405 28.691 359 210 11 14 329 103 458 7.85e-30 119
MS.gene93688.t1 MTR_8g465670 28.857 350 190 12 6 311 92 426 8.02e-30 119
MS.gene93688.t1 MTR_1g062380 27.763 389 222 12 14 349 107 489 8.79e-30 119
MS.gene93688.t1 MTR_8g006270 36.453 203 101 6 108 288 202 398 9.68e-30 119
MS.gene93688.t1 MTR_5g067170 28.371 356 210 10 18 328 101 456 9.71e-30 119
MS.gene93688.t1 MTR_7g102550 29.016 386 212 17 9 342 95 470 1.04e-29 119
MS.gene93688.t1 MTR_3g049970 35.196 179 106 3 159 328 269 446 1.08e-29 119
MS.gene93688.t1 MTR_5g039900 31.565 377 200 17 2 328 92 460 1.08e-29 119
MS.gene93688.t1 MTR_6g014170 31.900 279 149 10 79 328 172 438 1.37e-29 119
MS.gene93688.t1 MTR_7g011470 36.932 176 97 5 160 328 274 442 1.55e-29 118
MS.gene93688.t1 MTR_7g011470 36.932 176 97 5 160 328 270 438 1.62e-29 118
MS.gene93688.t1 MTR_6g014250 37.288 177 97 4 160 329 286 455 1.63e-29 118
MS.gene93688.t1 MTR_7g070940 31.356 354 189 14 18 326 103 447 1.94e-29 118
MS.gene93688.t1 MTR_6g013900 38.636 176 94 5 160 328 287 455 2.58e-29 118
MS.gene93688.t1 MTR_3g009510 30.403 273 160 7 88 332 187 457 2.97e-29 117
MS.gene93688.t1 MTR_7g070910 29.867 375 195 14 5 326 100 459 3.00e-29 118
MS.gene93688.t1 MTR_1g107365 33.495 206 126 5 150 350 295 494 3.07e-29 118
MS.gene93688.t1 MTR_1g107380 32.051 234 132 10 135 347 245 472 3.18e-29 117
MS.gene93688.t1 MTR_6g014240 37.356 174 95 4 160 326 255 421 3.61e-29 117
MS.gene93688.t1 MTR_6g035295 30.270 370 195 15 13 327 99 460 4.87e-29 117
MS.gene93688.t1 MTR_8g083280 34.454 238 142 8 119 345 229 463 5.07e-29 117
MS.gene93688.t1 MTR_6g014150 37.895 190 101 5 144 326 272 451 6.19e-29 117
MS.gene93688.t1 MTR_7g102560 27.913 369 215 11 10 329 95 461 6.72e-29 117
MS.gene93688.t1 MTR_5g027210 29.520 271 149 8 115 348 217 482 6.95e-29 117
MS.gene93688.t1 MTR_2g083420 26.685 371 220 12 2 344 81 427 8.13e-29 116
MS.gene93688.t1 MTR_6g035265 32.883 222 115 8 137 328 233 450 9.43e-29 116
MS.gene93688.t1 MTR_4g485590 31.765 255 156 6 30 272 116 364 9.98e-29 115
MS.gene93688.t1 MTR_8g074550 33.755 237 121 7 136 337 238 473 1.28e-28 116
MS.gene93688.t1 MTR_5g035560 32.946 258 149 10 108 347 200 451 1.46e-28 116
MS.gene93688.t1 MTR_8g043470 38.506 174 93 5 160 326 186 352 1.70e-28 114
MS.gene93688.t1 MTR_7g070810 30.330 333 190 9 23 315 108 438 1.87e-28 115
MS.gene93688.t1 MTR_8g032950 27.424 361 216 9 18 336 105 461 2.21e-28 115
MS.gene93688.t1 MTR_6g014290 35.238 210 113 7 135 328 252 454 2.49e-28 115
MS.gene93688.t1 MTR_6g038240 30.672 238 140 7 108 329 204 432 2.51e-28 115
MS.gene93688.t1 MTR_2g008210 36.872 179 98 5 160 329 282 454 2.86e-28 115
MS.gene93688.t1 MTR_7g070930 31.023 303 146 11 25 275 116 407 3.30e-28 115
MS.gene93688.t1 MTR_4g485640 27.586 348 206 12 18 322 293 637 4.18e-28 115
MS.gene93688.t1 MTR_8g006260 31.765 255 134 8 103 328 203 446 5.07e-28 114
MS.gene93688.t1 MTR_6g013960 36.946 203 110 7 138 329 262 457 6.00e-28 114
MS.gene93688.t1 MTR_7g080940 26.389 360 228 9 20 344 92 449 6.39e-28 114
MS.gene93688.t1 MTR_6g014040 38.636 176 94 4 160 328 289 457 7.64e-28 114
MS.gene93688.t1 MTR_3g069710 36.872 179 95 5 158 326 256 426 7.91e-28 113
MS.gene93688.t1 MTR_7g071040 29.670 364 195 13 18 328 112 467 7.94e-28 114
MS.gene93688.t1 MTR_5g035580 36.548 197 111 7 160 347 262 453 8.13e-28 113
MS.gene93688.t1 MTR_0536s0010 27.119 354 209 13 18 329 108 454 1.07e-27 113
MS.gene93688.t1 MTR_6g033660 35.676 185 103 4 153 326 259 438 1.13e-27 113
MS.gene93688.t1 MTR_8g006220 28.492 358 189 12 6 311 91 433 1.15e-27 113
MS.gene93688.t1 MTR_7g102490 41.333 150 77 6 148 288 268 415 1.39e-27 113
MS.gene93688.t1 MTR_6g038300 26.016 369 231 13 17 349 95 457 1.77e-27 112
MS.gene93688.t1 MTR_8g088560 33.043 230 135 8 108 323 205 429 1.97e-27 112
MS.gene93688.t1 MTR_7g102520 36.126 191 103 6 152 323 270 460 1.99e-27 113
MS.gene93688.t1 MTR_4g064987 28.732 355 204 17 13 331 84 425 2.21e-27 112
MS.gene93688.t1 MTR_5g016660 28.871 381 208 15 1 327 88 459 2.21e-27 112
MS.gene93688.t1 MTR_8g044140 28.297 364 204 13 2 315 55 411 2.66e-27 112
MS.gene93688.t1 MTR_5g070040 33.178 214 122 6 133 328 236 446 2.95e-27 112
MS.gene93688.t1 MTR_0477s0010 37.143 175 98 4 160 328 125 293 3.85e-27 109
MS.gene93688.t1 MTR_1g107375 33.178 214 122 7 147 350 254 456 3.92e-27 111
MS.gene93688.t1 MTR_3g084520 26.596 376 215 14 2 323 76 444 4.22e-27 112
MS.gene93688.t1 MTR_6g033675 30.702 228 129 8 119 326 221 439 4.40e-27 111
MS.gene93688.t1 MTR_5g464810 36.667 180 93 5 160 329 286 454 4.91e-27 111
MS.gene93688.t1 MTR_5g064240 36.667 180 93 5 160 329 286 454 4.91e-27 111
MS.gene93688.t1 MTR_7g102450 29.023 348 189 11 33 329 109 449 5.04e-27 111
MS.gene93688.t1 MTR_3g069690 34.831 178 97 6 160 326 255 424 5.46e-27 111
MS.gene93688.t1 MTR_8g064880 34.239 184 103 4 157 325 269 449 6.25e-27 111
MS.gene93688.t1 MTR_6g033615 26.852 324 203 8 30 326 109 425 6.58e-27 111
MS.gene93688.t1 MTR_4g108250 28.493 365 202 13 18 332 109 464 1.06e-26 110
MS.gene93688.t1 MTR_6g033625 31.250 240 152 5 97 326 203 439 1.22e-26 110
MS.gene93688.t1 MTR_0891s0010 33.898 177 102 4 160 328 97 266 1.23e-26 107
MS.gene93688.t1 MTR_6g033725 30.165 242 151 6 98 326 200 436 1.41e-26 110
MS.gene93688.t1 MTR_7g039550 35.417 240 126 9 115 328 2 238 1.74e-26 106
MS.gene93688.t1 MTR_8g083290 31.579 304 165 11 71 347 176 463 1.84e-26 109
MS.gene93688.t1 MTR_5g029800 26.891 357 213 11 18 328 100 454 1.92e-26 110
MS.gene93688.t1 MTR_7g013180 31.364 220 140 6 134 348 232 445 2.80e-26 109
MS.gene93688.t1 MTR_1g032490 36.686 169 97 3 158 317 269 436 3.07e-26 109
MS.gene93688.t1 MTR_3g479520 26.316 380 211 15 7 328 91 459 3.60e-26 109
MS.gene93688.t1 MTR_5g075440 27.577 359 212 15 10 329 84 433 3.86e-26 108
MS.gene93688.t1 MTR_4g064987 28.065 367 197 17 13 331 84 431 4.75e-26 108
MS.gene93688.t1 MTR_7g070870 38.764 178 92 5 113 275 225 400 4.78e-26 108
MS.gene93688.t1 MTR_7g470610 31.429 280 150 8 42 289 5 274 5.11e-26 105
MS.gene93688.t1 MTR_7g070583 31.429 280 150 8 42 289 5 274 5.11e-26 105
MS.gene93688.t1 MTR_0036s0220 35.556 180 95 5 160 329 286 454 5.42e-26 108
MS.gene93688.t1 MTR_0009s0240 30.455 220 135 7 119 325 220 434 6.24e-26 108
MS.gene93688.t1 MTR_7g070780 35.870 184 101 5 160 326 275 458 6.25e-26 108
MS.gene93688.t1 MTR_5g070090 34.434 212 119 7 133 325 236 446 7.84e-26 108
MS.gene93688.t1 MTR_1g040310 34.322 236 126 9 118 327 227 459 9.81e-26 108
MS.gene93688.t1 MTR_7g080950 31.217 189 117 5 151 329 240 425 1.07e-25 107
MS.gene93688.t1 MTR_1g107315 36.257 171 95 4 158 317 267 434 1.40e-25 107
MS.gene93688.t1 MTR_5g072860 31.739 230 144 8 108 329 219 443 1.41e-25 107
MS.gene93688.t1 MTR_3g084540 33.636 220 119 8 129 323 228 445 1.47e-25 107
MS.gene93688.t1 MTR_5g031840 37.297 185 94 6 158 321 270 453 1.60e-25 107
MS.gene93688.t1 MTR_5g464760 36.464 181 98 5 160 332 288 459 1.87e-25 107
MS.gene93688.t1 MTR_7g080900 25.333 375 235 12 10 345 85 453 2.38e-25 106
MS.gene93688.t1 MTR_4g024020 29.102 323 165 16 18 288 105 415 3.38e-25 106
MS.gene93688.t1 MTR_5g072830 25.806 248 169 7 108 344 202 445 3.91e-25 105
MS.gene93688.t1 MTR_5g016480 31.100 209 125 6 157 350 270 474 3.93e-25 106
MS.gene93688.t1 MTR_5g090660 29.412 272 161 7 105 347 203 472 4.18e-25 106
MS.gene93688.t1 MTR_4g128720 34.884 172 99 4 160 326 267 430 4.51e-25 105
MS.gene93688.t1 MTR_7g013240 35.106 188 109 8 134 315 225 405 4.80e-25 105
MS.gene93688.t1 MTR_8g064870 29.630 216 128 4 134 328 238 450 5.97e-25 105
MS.gene93688.t1 MTR_3g084530 32.432 222 122 8 129 325 228 446 6.18e-25 105
MS.gene93688.t1 MTR_5g072810 26.104 249 167 7 108 344 207 450 7.65e-25 105
MS.gene93688.t1 MTR_7g013260 35.106 188 109 8 134 315 226 406 7.95e-25 105
MS.gene93688.t1 MTR_3g479490 34.857 175 101 4 161 328 282 450 8.09e-25 105
MS.gene93688.t1 MTR_7g071050 28.916 332 182 11 18 323 108 411 8.59e-25 104
MS.gene93688.t1 MTR_4g082820 31.818 198 116 4 145 326 244 438 1.01e-24 105
MS.gene93688.t1 MTR_4g082810 35.294 170 97 2 133 289 236 405 1.54e-24 103
MS.gene93688.t1 MTR_5g090700 27.635 351 188 13 57 347 132 476 2.04e-24 104
MS.gene93688.t1 MTR_3g031400 28.261 230 150 7 105 326 202 424 2.77e-24 103
MS.gene93688.t1 MTR_3g479610 32.418 182 105 5 151 324 114 285 2.92e-24 101
MS.gene93688.t1 MTR_5g090600 30.837 227 135 8 135 347 235 453 3.29e-24 103
MS.gene93688.t1 MTR_3g031450 28.571 217 138 6 105 311 200 409 3.46e-24 103
MS.gene93688.t1 MTR_3g079480 32.418 182 105 5 151 324 290 461 4.83e-24 103
MS.gene93688.t1 MTR_5g090630 29.960 247 139 8 130 347 224 465 5.33e-24 102
MS.gene93688.t1 MTR_5g031860 36.216 185 96 6 158 321 278 461 5.40e-24 102
MS.gene93688.t1 MTR_5g090580 29.856 278 156 9 103 347 203 474 7.11e-24 102
MS.gene93688.t1 MTR_7g102460 39.024 123 67 3 160 274 276 398 1.92e-23 101
MS.gene93688.t1 MTR_2g059240 28.344 314 182 10 14 288 100 409 2.66e-23 100
MS.gene93688.t1 MTR_5g072840 25.806 248 169 7 108 344 202 445 2.77e-23 100
MS.gene93688.t1 MTR_5g031830 36.216 185 96 6 158 321 279 462 3.45e-23 100
MS.gene93688.t1 MTR_5g098930 29.464 224 126 6 157 351 251 471 5.13e-23 100
MS.gene93688.t1 MTR_5g072820 26.407 231 159 6 108 331 202 428 7.10e-23 99.4
MS.gene93688.t1 MTR_5g090620 31.472 197 108 4 157 328 258 452 7.14e-23 99.8
MS.gene93688.t1 MTR_3g479470 36.986 146 84 3 158 296 286 430 7.23e-23 99.8
MS.gene93688.t1 MTR_6g078320 28.761 226 136 6 125 329 236 457 1.43e-22 99.0
MS.gene93688.t1 MTR_2g098430 33.526 173 97 4 161 318 268 437 2.49e-22 98.2
MS.gene93688.t1 MTR_7g013220 34.043 141 86 3 158 293 259 397 2.55e-22 97.8
MS.gene93688.t1 MTR_7g013200 36.986 146 79 4 134 272 225 364 5.01e-22 97.1
MS.gene93688.t1 MTR_5g090670 29.464 224 126 6 153 347 256 476 7.21e-22 96.7
MS.gene93688.t1 MTR_5g004940 29.524 210 113 4 153 348 190 378 1.13e-21 95.5
MS.gene93688.t1 MTR_3g009490 32.941 170 88 5 186 332 3 169 1.48e-21 91.3
MS.gene93688.t1 MTR_2g046820 34.395 157 82 4 150 289 247 399 1.53e-21 95.9
MS.gene93688.t1 MTR_8g466240 30.894 246 152 7 115 344 207 450 1.61e-21 95.5
MS.gene93688.t1 MTR_2g040530 33.758 157 83 4 150 289 249 401 2.07e-21 95.5
MS.gene93688.t1 MTR_2g046750 32.178 202 105 7 100 279 202 393 2.23e-21 95.1
MS.gene93688.t1 MTR_2086s0010 33.758 157 85 5 182 328 1 148 3.15e-21 90.1
MS.gene93688.t1 MTR_1996s0010 33.758 157 85 5 182 328 1 148 3.15e-21 90.1
MS.gene93688.t1 MTR_7g080960 29.851 201 102 4 141 330 299 471 3.35e-21 94.7
MS.gene93688.t1 MTR_6g014185 33.333 180 90 6 156 334 176 326 4.03e-21 93.6
MS.gene93688.t1 MTR_5g090610 27.857 280 163 10 105 351 191 464 1.36e-20 92.8
MS.gene93688.t1 MTR_1g090280 31.720 186 102 6 182 348 133 312 1.85e-20 90.9
MS.gene93688.t1 MTR_4g094920 27.426 237 148 8 109 326 223 454 3.75e-20 92.0
MS.gene93688.t1 MTR_7g070760 39.669 121 50 2 160 275 90 192 4.98e-20 87.4
MS.gene93688.t1 MTR_6g014300 33.117 154 89 5 180 326 294 440 5.17e-20 91.3
MS.gene93688.t1 MTR_5g098960 31.441 229 138 9 127 345 225 444 5.35e-20 91.3
MS.gene93688.t1 MTR_5g066390 37.255 153 79 6 183 328 49 191 5.50e-20 87.8
MS.gene93688.t1 MTR_4g095008 26.848 257 158 9 105 342 204 449 1.03e-19 90.5
MS.gene93688.t1 MTR_5g072850 31.461 178 107 5 108 279 157 325 1.34e-19 89.4
MS.gene93688.t1 MTR_6g014000 39.655 116 62 3 214 328 24 132 4.74e-19 88.6
MS.gene93688.t1 MTR_2g083360 24.784 347 176 11 2 344 102 367 6.55e-19 87.4
MS.gene93688.t1 MTR_8g009840 33.951 162 81 5 177 315 333 491 2.53e-18 86.7
MS.gene93688.t1 MTR_6g013680 32.934 167 62 3 160 326 235 351 1.64e-17 83.2
MS.gene93688.t1 MTR_8g056740 27.184 309 182 8 24 317 46 326 3.49e-17 82.4
MS.gene93688.t1 MTR_6g014160 38.596 114 45 3 159 272 269 357 3.30e-16 79.7
MS.gene93688.t1 MTR_7g070995 38.710 124 62 5 218 332 3 121 8.43e-16 74.3
MS.gene93688.t1 MTR_5g090690 27.193 228 138 7 49 257 87 305 2.45e-15 77.0
MS.gene93688.t1 MTR_0536s0030 35.484 124 67 4 219 333 210 329 9.14e-15 75.1
MS.gene93688.t1 MTR_7g007870 60.000 55 21 1 257 311 2 55 1.78e-13 65.1
MS.gene93688.t1 MTR_1g107325 30.693 101 69 1 229 328 229 329 5.74e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93688.t1 AT5G65550 38.845 381 197 8 2 348 82 460 1.73e-88 274
MS.gene93688.t1 AT2G22590 38.845 381 193 7 2 347 91 466 4.38e-85 265
MS.gene93688.t1 AT5G49690 39.037 374 198 8 1 348 83 452 4.21e-82 257
MS.gene93688.t1 AT5G54010 31.200 375 221 10 2 348 79 444 1.17e-46 165
MS.gene93688.t1 AT5G53990 28.267 375 226 11 2 348 79 438 1.70e-43 156
MS.gene93688.t1 AT1G64910 29.600 375 221 11 2 348 79 438 1.94e-43 156
MS.gene93688.t1 AT3G29630 30.933 375 225 12 2 351 79 444 1.05e-42 154
MS.gene93688.t1 AT1G64920 30.027 373 226 13 2 348 79 442 2.39e-42 153
MS.gene93688.t1 AT1G50580 29.223 373 232 11 2 351 79 442 1.26e-41 151
MS.gene93688.t1 AT4G27570 28.010 382 239 9 2 356 80 452 5.18e-41 149
MS.gene93688.t1 AT2G22930 28.418 373 228 11 2 348 79 438 3.04e-40 147
MS.gene93688.t1 AT4G27560 27.749 382 240 11 2 356 80 452 6.27e-39 144
MS.gene93688.t1 AT4G09500 29.730 370 227 12 2 348 79 438 5.31e-38 141
MS.gene93688.t1 AT4G34131 28.693 352 205 11 18 329 113 458 3.63e-37 140
MS.gene93688.t1 AT2G18560 34.733 262 149 7 85 326 92 351 1.97e-36 135
MS.gene93688.t1 AT3G29630 29.223 373 208 11 2 351 79 418 2.94e-36 136
MS.gene93688.t1 AT4G34138 29.023 348 213 9 14 328 112 458 1.34e-35 135
MS.gene93688.t1 AT2G18570 34.711 242 130 7 108 326 205 441 4.72e-35 134
MS.gene93688.t1 AT5G54060 28.684 380 226 11 2 343 86 458 5.03e-35 134
MS.gene93688.t1 AT2G15490 29.462 353 204 10 18 329 110 458 1.08e-34 133
MS.gene93688.t1 AT2G15490 28.857 350 207 9 18 329 110 455 4.01e-34 131
MS.gene93688.t1 AT5G26310 31.271 291 158 8 83 338 176 459 2.69e-33 129
MS.gene93688.t1 AT2G15480 28.571 350 209 11 18 328 113 460 9.99e-33 127
MS.gene93688.t1 AT1G01420 32.692 260 145 6 108 342 210 464 1.01e-32 127
MS.gene93688.t1 AT1G01420 32.692 260 145 6 108 342 207 461 1.06e-32 127
MS.gene93688.t1 AT3G46680 30.882 340 192 14 16 324 95 422 1.31e-32 127
MS.gene93688.t1 AT2G31790 31.579 266 159 8 98 344 192 453 4.83e-32 125
MS.gene93688.t1 AT4G01070 34.855 241 130 6 108 326 207 442 5.41e-32 125
MS.gene93688.t1 AT4G34135 29.091 330 200 9 18 313 114 443 6.49e-32 125
MS.gene93688.t1 AT3G50740 33.937 221 117 7 125 322 229 443 6.98e-32 125
MS.gene93688.t1 AT2G16890 34.646 254 146 9 89 329 198 444 7.14e-32 125
MS.gene93688.t1 AT5G66690 31.203 266 148 5 85 322 178 436 7.75e-32 125
MS.gene93688.t1 AT2G15480 27.654 358 211 11 18 329 113 468 1.06e-31 125
MS.gene93688.t1 AT4G09500 27.838 370 209 12 2 348 79 413 3.57e-31 122
MS.gene93688.t1 AT5G05880 39.429 175 90 5 157 322 252 419 5.00e-31 122
MS.gene93688.t1 AT1G05680 28.056 360 201 14 10 323 77 424 9.22e-31 122
MS.gene93688.t1 AT5G05890 36.098 205 109 7 157 347 256 452 1.75e-30 121
MS.gene93688.t1 AT3G46650 28.955 335 185 11 33 336 110 422 2.49e-30 120
MS.gene93688.t1 AT3G46670 26.781 351 211 10 33 347 108 448 3.42e-30 120
MS.gene93688.t1 AT2G43840 31.466 232 136 9 108 323 194 418 5.90e-30 119
MS.gene93688.t1 AT1G73880 28.205 390 223 14 2 347 90 466 9.74e-30 119
MS.gene93688.t1 AT2G43840 31.466 232 136 9 108 323 194 418 1.14e-29 119
MS.gene93688.t1 AT3G16520 31.163 215 127 5 126 323 228 438 1.37e-29 118
MS.gene93688.t1 AT3G16520 31.163 215 127 5 126 323 228 438 1.60e-29 118
MS.gene93688.t1 AT3G16520 31.163 215 127 5 126 323 228 438 1.98e-29 118
MS.gene93688.t1 AT2G29740 37.245 196 102 6 135 315 251 440 1.98e-29 118
MS.gene93688.t1 AT5G14860 35.149 202 118 6 135 329 257 452 2.08e-29 118
MS.gene93688.t1 AT3G53150 30.259 347 191 11 14 311 114 458 3.22e-29 118
MS.gene93688.t1 AT2G29730 33.679 193 115 5 146 329 252 440 5.01e-29 117
MS.gene93688.t1 AT3G55700 33.898 236 129 9 129 347 225 450 5.53e-29 117
MS.gene93688.t1 AT3G53160 37.173 191 102 6 157 329 270 460 5.56e-29 117
MS.gene93688.t1 AT4G36770 35.938 192 97 4 159 328 253 440 6.87e-29 116
MS.gene93688.t1 AT2G23260 30.081 246 154 7 98 329 190 431 1.33e-28 115
MS.gene93688.t1 AT2G23250 28.125 352 216 13 4 326 67 410 1.38e-28 115
MS.gene93688.t1 AT5G05900 37.056 197 111 5 157 347 258 447 1.38e-28 115
MS.gene93688.t1 AT1G51210 27.859 341 214 12 9 326 101 432 1.48e-28 115
MS.gene93688.t1 AT2G31750 27.865 384 229 18 10 353 85 460 1.78e-28 115
MS.gene93688.t1 AT2G31750 28.000 375 222 18 10 344 85 451 1.95e-28 115
MS.gene93688.t1 AT5G59590 27.473 364 201 15 27 345 102 447 2.65e-28 115
MS.gene93688.t1 AT2G36800 27.968 379 215 12 1 327 91 463 3.27e-28 115
MS.gene93688.t1 AT5G38040 33.005 203 118 5 153 344 251 446 4.55e-28 114
MS.gene93688.t1 AT1G01390 34.199 231 123 5 132 338 233 458 6.63e-28 114
MS.gene93688.t1 AT3G11340 35.955 178 98 5 158 326 249 419 6.95e-28 114
MS.gene93688.t1 AT1G01390 34.199 231 123 5 132 338 250 475 7.60e-28 114
MS.gene93688.t1 AT5G17050 34.343 198 113 6 137 329 249 434 1.00e-27 113
MS.gene93688.t1 AT1G22400 34.637 179 99 4 160 329 289 458 1.19e-27 113
MS.gene93688.t1 AT1G05675 33.188 229 133 8 109 323 202 424 1.35e-27 113
MS.gene93688.t1 AT1G07260 30.769 247 144 8 101 328 210 448 1.35e-27 113
MS.gene93688.t1 AT2G36780 28.296 311 180 10 1 272 93 399 1.79e-27 113
MS.gene93688.t1 AT1G07250 33.051 236 136 8 108 327 219 448 1.80e-27 112
MS.gene93688.t1 AT2G43820 30.153 262 154 11 108 348 194 447 1.83e-27 112
MS.gene93688.t1 AT1G78270 35.556 180 97 5 160 329 287 457 1.86e-27 113
MS.gene93688.t1 AT2G30140 31.330 233 147 7 103 329 203 428 2.52e-27 112
MS.gene93688.t1 AT2G30140 31.330 233 147 7 103 329 204 429 2.75e-27 112
MS.gene93688.t1 AT5G38010 27.492 331 188 10 33 326 113 428 4.04e-27 111
MS.gene93688.t1 AT4G15480 34.637 179 106 3 157 325 275 452 6.68e-27 111
MS.gene93688.t1 AT2G16890 34.934 229 129 9 89 304 198 419 9.07e-27 110
MS.gene93688.t1 AT2G36760 27.759 299 174 9 13 272 104 399 9.69e-27 110
MS.gene93688.t1 AT5G59580 27.679 336 180 14 33 326 108 422 9.85e-27 110
MS.gene93688.t1 AT3G46690 28.615 325 192 11 33 326 109 424 1.19e-26 110
MS.gene93688.t1 AT5G05860 28.818 347 206 10 16 333 91 425 1.46e-26 110
MS.gene93688.t1 AT2G29710 34.254 181 109 5 157 329 262 440 1.48e-26 110
MS.gene93688.t1 AT4G15260 29.412 272 149 9 111 347 95 358 1.72e-26 108
MS.gene93688.t1 AT3G46720 33.636 220 132 7 135 348 230 441 2.38e-26 109
MS.gene93688.t1 AT3G55710 34.146 205 113 7 157 347 258 454 2.53e-26 109
MS.gene93688.t1 AT3G46700 35.227 176 98 5 158 324 249 417 2.71e-26 109
MS.gene93688.t1 AT2G36750 27.704 379 201 12 13 321 100 475 2.85e-26 109
MS.gene93688.t1 AT2G36770 28.852 305 174 11 7 272 99 399 3.21e-26 109
MS.gene93688.t1 AT1G22380 33.520 179 101 4 160 329 288 457 5.49e-26 108
MS.gene93688.t1 AT4G15490 33.180 217 132 7 118 323 224 438 5.73e-26 108
MS.gene93688.t1 AT4G15280 33.032 221 114 8 134 328 238 450 6.77e-26 108
MS.gene93688.t1 AT1G07240 32.143 252 145 9 98 329 208 453 6.81e-26 108
MS.gene93688.t1 AT4G15280 33.032 221 114 8 134 328 270 482 7.58e-26 108
MS.gene93688.t1 AT1G10400 35.577 208 115 9 149 345 261 460 1.09e-25 107
MS.gene93688.t1 AT1G05530 26.124 356 208 12 32 344 108 451 1.40e-25 107
MS.gene93688.t1 AT5G03490 26.331 338 214 13 18 328 109 438 1.54e-25 107
MS.gene93688.t1 AT5G05870 33.173 208 117 6 158 351 259 458 1.62e-25 107
MS.gene93688.t1 AT2G29750 32.474 194 110 6 135 313 251 438 1.75e-25 107
MS.gene93688.t1 AT3G21800 32.579 221 118 6 134 328 237 452 2.48e-25 107
MS.gene93688.t1 AT3G46660 31.500 200 122 5 135 326 238 430 2.54e-25 106
MS.gene93688.t1 AT1G22360 32.796 186 109 4 160 337 285 462 7.08e-25 105
MS.gene93688.t1 AT5G12890 26.684 386 228 12 3 344 92 466 2.41e-24 103
MS.gene93688.t1 AT4G14090 32.000 200 125 6 132 323 231 427 3.31e-24 103
MS.gene93688.t1 AT5G17030 31.313 198 121 6 137 329 246 433 4.06e-24 103
MS.gene93688.t1 AT1G05560 26.346 353 208 12 33 345 109 449 4.31e-24 103
MS.gene93688.t1 AT2G30150 29.694 229 152 6 105 329 191 414 4.35e-24 102
MS.gene93688.t1 AT1G30530 32.353 204 116 6 145 343 247 433 4.58e-24 103
MS.gene93688.t1 AT2G30150 29.694 229 152 6 105 329 207 430 5.62e-24 102
MS.gene93688.t1 AT2G26480 34.300 207 106 8 135 324 225 418 7.51e-24 102
MS.gene93688.t1 AT1G05560 26.346 353 208 12 33 345 159 499 8.13e-24 102
MS.gene93688.t1 AT1G22340 33.333 180 101 4 160 329 288 458 8.63e-24 102
MS.gene93688.t1 AT2G36970 24.198 343 201 12 33 332 125 451 1.34e-23 102
MS.gene93688.t1 AT2G28080 26.695 236 145 9 98 317 217 440 1.35e-23 102
MS.gene93688.t1 AT5G17040 32.828 198 118 7 137 329 128 315 1.74e-23 99.8
MS.gene93688.t1 AT3G21760 33.166 199 109 6 152 328 261 457 3.68e-23 100
MS.gene93688.t1 AT3G21750 30.734 218 117 5 137 326 232 443 4.66e-23 100
MS.gene93688.t1 AT5G17040 34.225 187 104 7 160 341 251 423 5.07e-23 99.8
MS.gene93688.t1 AT1G22370 33.168 202 109 6 160 344 113 305 6.67e-23 97.8
MS.gene93688.t1 AT3G21560 32.778 180 108 4 154 328 271 442 7.92e-23 99.8
MS.gene93688.t1 AT2G36790 28.571 301 169 8 13 272 103 398 1.75e-22 98.6
MS.gene93688.t1 AT1G22370 33.168 202 109 6 160 344 283 475 3.00e-22 97.8
MS.gene93688.t1 AT1G24100 33.136 169 104 4 160 323 266 430 3.08e-22 97.8
MS.gene93688.t1 AT1G22360 31.383 188 97 4 160 337 285 450 5.22e-22 97.1
MS.gene93688.t1 AT4G15550 30.769 208 120 7 134 325 248 447 7.47e-22 96.7
MS.gene93688.t1 AT4G15500 31.000 200 122 6 160 345 267 464 1.36e-21 95.9
MS.gene93688.t1 AT3G21790 29.098 244 142 5 111 328 217 455 1.42e-21 95.9
MS.gene93688.t1 AT3G21780 30.303 231 135 5 95 306 196 419 1.74e-21 95.9
MS.gene93688.t1 AT3G02100 23.677 359 215 13 33 351 124 463 1.31e-20 93.2
MS.gene93688.t1 AT5G37950 26.667 270 153 9 33 266 85 345 4.73e-17 81.6
MS.gene93688.t1 AT5G37950 32.544 169 92 6 111 266 180 339 7.01e-17 81.3
MS.gene93688.t1 AT1G06000 25.538 372 220 13 3 344 86 430 1.92e-16 80.5
MS.gene93688.t1 AT3G22250 28.571 175 112 5 158 324 272 441 5.32e-16 79.3

Find 69 sgRNAs with CRISPR-Local

Find 82 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGATTGATTTGGAGTAAT+TGG 0.116836 7.1:-34272854 MS.gene93688:CDS
TATATGACTTTGCACCTTAT+TGG 0.154659 7.1:-34273415 MS.gene93688:CDS
CAACTAAACTTTGCTCATTA+TGG 0.154667 7.1:+34272715 None:intergenic
CATGTTTATCCAACCATTTA+AGG 0.216218 7.1:+34273042 None:intergenic
CTGGAGTTACAGATATGTTT+AGG 0.236963 7.1:-34273241 MS.gene93688:CDS
GTAGAGATGAGCAAGATATT+TGG 0.247799 7.1:-34272549 MS.gene93688:CDS
ATTGGGATACAATCCTTAAA+TGG 0.254930 7.1:-34273055 MS.gene93688:CDS
ATGCCAAACTTTGGTAATAT+TGG 0.265902 7.1:+34273386 None:intergenic
CAATAAAATCAGCACCAAAA+AGG 0.272032 7.1:+34273207 None:intergenic
AGTGCAATTGGTATGTCTTA+TGG 0.289244 7.1:-34273338 MS.gene93688:CDS
TCAAAAGCTTTCTTGAGATA+TGG 0.297596 7.1:+34273494 None:intergenic
CAAATAAGAAAGGATTGATT+TGG 0.317626 7.1:-34272863 MS.gene93688:CDS
CCACCAATATTACCAAAGTT+TGG 0.327906 7.1:-34273389 MS.gene93688:CDS
AATATTGGTGGTAACCAATA+AGG 0.329461 7.1:+34273401 None:intergenic
AATGCTTAGGAGCAGGGATA+TGG 0.332507 7.1:+34272472 None:intergenic
TCAATCCTTTCTTATTTGAT+TGG 0.336796 7.1:+34272868 None:intergenic
TGGAGTTACAGATATGTTTA+GGG 0.384962 7.1:-34273240 MS.gene93688:CDS
TACTTAGAACAAAATGAATC+TGG 0.396165 7.1:-34273260 MS.gene93688:CDS
AGGATTGATTTGGAGTAATT+GGG 0.399508 7.1:-34272853 MS.gene93688:CDS
TCAGTGGTTTATGTTGCATT+TGG 0.407277 7.1:-34273011 MS.gene93688:CDS
TATGGAGTGGAATTCTTAGT+TGG 0.407714 7.1:-34273320 MS.gene93688:CDS
CAAGCCAACCATCTTTAACT+TGG 0.417504 7.1:+34272898 None:intergenic
TCAGTGATGGTAGGGGAGGA+AGG 0.418828 7.1:-34272594 MS.gene93688:CDS
AAGTCATATATAATACAATC+AGG 0.420016 7.1:+34273428 None:intergenic
AAGTTTAGTTGCTAGACATA+TGG 0.428353 7.1:-34272703 MS.gene93688:CDS
GTTCTTCAGAATCCAAAGAA+AGG 0.434864 7.1:+34272920 None:intergenic
ATCTTAGCACATGAGTCTAT+TGG 0.465321 7.1:-34272816 MS.gene93688:CDS
ATGCTTAAGATGCCAAACTT+TGG 0.473748 7.1:+34273377 None:intergenic
GGATACAATCCTTAAATGGT+TGG 0.475669 7.1:-34273051 MS.gene93688:CDS
CTGAAGAACCAAGTTAAAGA+TGG 0.475867 7.1:-34272906 MS.gene93688:CDS
CCAAACTTTGGTAATATTGG+TGG 0.477237 7.1:+34273389 None:intergenic
AAGTGCTAATGCTTAGGAGC+AGG 0.488421 7.1:+34272465 None:intergenic
TACATTAAGTGCTAATGCTT+AGG 0.492369 7.1:+34272459 None:intergenic
GACGGTGGCAATAATCCAAC+TGG 0.492590 7.1:+34273110 None:intergenic
TTCTTCAGAATCCAAAGAAA+GGG 0.497554 7.1:+34272921 None:intergenic
CACAAGGGATTCAGTGGCTA+AGG 0.500722 7.1:-34272625 MS.gene93688:CDS
AGATGACTTTGTTGATTATG+TGG 0.502096 7.1:-34272499 MS.gene93688:CDS
TAGACATATGGAAGAAAGAA+TGG 0.505666 7.1:-34272691 MS.gene93688:CDS
CATTGAGATCAGTGATGGTA+GGG 0.513307 7.1:-34272602 MS.gene93688:CDS
GAGAACCAATCAAATAAGAA+AGG 0.521190 7.1:-34272873 MS.gene93688:CDS
TTAGCACATGAGTCTATTGG+TGG 0.525065 7.1:-34272813 MS.gene93688:CDS
TATTGCTGCAAGAAGTTGCA+TGG 0.530937 7.1:-34273189 MS.gene93688:CDS
GCATTGAGATCAGTGATGGT+AGG 0.534840 7.1:-34272603 MS.gene93688:CDS
AGAACCAAGTTAAAGATGGT+TGG 0.535882 7.1:-34272902 MS.gene93688:CDS
AGAAGTTGCATGGAGGTTGA+AGG 0.543895 7.1:-34273179 MS.gene93688:CDS
GAATTCACTGAGATAGCTAA+AGG 0.544334 7.1:-34272963 MS.gene93688:CDS
GTGATAGAGAGTCTTCAAGT+TGG 0.549562 7.1:-34272762 MS.gene93688:CDS
AAACTTTGCTCATTATGGAA+AGG 0.549754 7.1:+34272720 None:intergenic
CATATGGAAGAAAGAATGGT+GGG 0.550250 7.1:-34272687 MS.gene93688:CDS
TATGGAAGAAAGAATGGTGG+GGG 0.575838 7.1:-34272685 MS.gene93688:CDS
AGTGCTAATGCTTAGGAGCA+GGG 0.583906 7.1:+34272466 None:intergenic
AGATATGGAACAACGTGTGT+TGG 0.595243 7.1:+34273509 None:intergenic
TGGAAAGGTAACATAATGAG+TGG 0.614104 7.1:+34272735 None:intergenic
GAGCAAGATATTTGGAGACA+AGG 0.623410 7.1:-34272541 MS.gene93688:CDS
AGTCATATATAATACAATCA+GGG 0.627292 7.1:+34273429 None:intergenic
GAAATTCACAAGGGATTCAG+TGG 0.627722 7.1:-34272631 MS.gene93688:CDS
TAAGGCATTGAGATCAGTGA+TGG 0.629226 7.1:-34272607 MS.gene93688:CDS
AGTTGGAAAGTCAAATGATG+AGG 0.632196 7.1:-34273303 MS.gene93688:CDS
GAGATCAGTGATGGTAGGGG+AGG 0.636457 7.1:-34272598 MS.gene93688:CDS
ATATGGAAGAAAGAATGGTG+GGG 0.636792 7.1:-34272686 MS.gene93688:CDS
TCATTGAATTGTAGCGACGG+TGG 0.640610 7.1:+34273095 None:intergenic
TCTTCATTGAATTGTAGCGA+CGG 0.640770 7.1:+34273092 None:intergenic
ATTGAGATCAGTGATGGTAG+GGG 0.646864 7.1:-34272601 MS.gene93688:CDS
ACATATGGAAGAAAGAATGG+TGG 0.650644 7.1:-34272688 MS.gene93688:CDS
AAAATGATGAGAAATTCACA+AGG 0.668308 7.1:-34272641 MS.gene93688:CDS
AATTGGTATGTCTTATGGAG+TGG 0.685913 7.1:-34273333 MS.gene93688:CDS
TGTGCTAAGATTCTCAACTG+TGG 0.722050 7.1:+34272828 None:intergenic
AAATGATGAGAAATTCACAA+GGG 0.736798 7.1:-34272640 MS.gene93688:CDS
TGCTGCAAGAAGTTGCATGG+AGG 0.751081 7.1:-34273186 MS.gene93688:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAAATGATGAAAAT+TGG - chr7.1:34272915-34272934 MS.gene93688:CDS 15.0%
!! AGAAAAAAATGATGAAAATT+GGG - chr7.1:34272916-34272935 MS.gene93688:CDS 15.0%
!! AAGTCATATATAATACAATC+AGG + chr7.1:34272563-34272582 None:intergenic 20.0%
!! AGTCATATATAATACAATCA+GGG + chr7.1:34272562-34272581 None:intergenic 20.0%
!!! CAAAGTCATCTAAATATTTT+TGG + chr7.1:34273480-34273499 None:intergenic 20.0%
!!! TTTTCCAAAAATTCAATCAA+AGG + chr7.1:34272533-34272552 None:intergenic 20.0%
! AAAATGATGAGAAATTCACA+AGG - chr7.1:34273347-34273366 MS.gene93688:CDS 25.0%
! AAATGATGAGAAATTCACAA+GGG - chr7.1:34273348-34273367 MS.gene93688:CDS 25.0%
! AATAAAATCAGCACCAAAAA+GGG + chr7.1:34272783-34272802 None:intergenic 25.0%
! CAAATAAGAAAGGATTGATT+TGG - chr7.1:34273125-34273144 MS.gene93688:CDS 25.0%
! TACTTAGAACAAAATGAATC+TGG - chr7.1:34272728-34272747 MS.gene93688:CDS 25.0%
!! ACAACCTTTGATTGAATTTT+TGG - chr7.1:34272526-34272545 MS.gene93688:CDS 25.0%
!! TCAATCCTTTCTTATTTGAT+TGG + chr7.1:34273123-34273142 None:intergenic 25.0%
!!! TTCTCAATTTTTAGTGCAAT+TGG - chr7.1:34272638-34272657 MS.gene93688:CDS 25.0%
AAACTTTGCTCATTATGGAA+AGG + chr7.1:34273271-34273290 None:intergenic 30.0%
AAGAAAAAAGTGATTCCAGT+TGG - chr7.1:34272863-34272882 MS.gene93688:CDS 30.0%
AAGTTTAGTTGCTAGACATA+TGG - chr7.1:34273285-34273304 MS.gene93688:CDS 30.0%
ATTGGGATACAATCCTTAAA+TGG - chr7.1:34272933-34272952 MS.gene93688:CDS 30.0%
CAACTAAACTTTGCTCATTA+TGG + chr7.1:34273276-34273295 None:intergenic 30.0%
CAATAAAATCAGCACCAAAA+AGG + chr7.1:34272784-34272803 None:intergenic 30.0%
CATGTTTATCCAACCATTTA+AGG + chr7.1:34272949-34272968 None:intergenic 30.0%
GAGAACCAATCAAATAAGAA+AGG - chr7.1:34273115-34273134 MS.gene93688:CDS 30.0%
GGTTGGATAAACATGAAAAA+AGG - chr7.1:34272954-34272973 MS.gene93688:CDS 30.0%
TAAACATGAAAAAAGGTCAG+TGG - chr7.1:34272961-34272980 MS.gene93688:CDS 30.0%
TAGACATATGGAAGAAAGAA+TGG - chr7.1:34273297-34273316 MS.gene93688:CDS 30.0%
TATATGACTTTGCACCTTAT+TGG - chr7.1:34272573-34272592 MS.gene93688:CDS 30.0%
TCAAAAGCTTTCTTGAGATA+TGG + chr7.1:34272497-34272516 None:intergenic 30.0%
TGGAGTTACAGATATGTTTA+GGG - chr7.1:34272748-34272767 MS.gene93688:CDS 30.0%
TTCTTCAGAATCCAAAGAAA+GGG + chr7.1:34273070-34273089 None:intergenic 30.0%
! AATATTGGTGGTAACCAATA+AGG + chr7.1:34272590-34272609 None:intergenic 30.0%
! AGATGACTTTGTTGATTATG+TGG - chr7.1:34273489-34273508 MS.gene93688:CDS 30.0%
! ATGCCAAACTTTGGTAATAT+TGG + chr7.1:34272605-34272624 None:intergenic 30.0%
! TATCTCAAGAAAGCTTTTGA+TGG - chr7.1:34272497-34272516 MS.gene93688:CDS 30.0%
!! AAGGATTGATTTGGAGTAAT+TGG - chr7.1:34273134-34273153 MS.gene93688:CDS 30.0%
!! AGGATTGATTTGGAGTAATT+GGG - chr7.1:34273135-34273154 MS.gene93688:CDS 30.0%
!!! TATCTAGTTTTCCCTTTCTT+TGG - chr7.1:34273056-34273075 MS.gene93688:CDS 30.0%
AATTGGTATGTCTTATGGAG+TGG - chr7.1:34272655-34272674 MS.gene93688:CDS 35.0%
ACATATGGAAGAAAGAATGG+TGG - chr7.1:34273300-34273319 MS.gene93688:CDS 35.0%
AGAACCAAGTTAAAGATGGT+TGG - chr7.1:34273086-34273105 MS.gene93688:CDS 35.0%
AGTGCAATTGGTATGTCTTA+TGG - chr7.1:34272650-34272669 MS.gene93688:CDS 35.0%
AGTTGGAAAGTCAAATGATG+AGG - chr7.1:34272685-34272704 MS.gene93688:CDS 35.0%
ATATGGAAGAAAGAATGGTG+GGG - chr7.1:34273302-34273321 MS.gene93688:CDS 35.0%
ATCTTAGCACATGAGTCTAT+TGG - chr7.1:34273172-34273191 MS.gene93688:CDS 35.0%
ATGCTTAAGATGCCAAACTT+TGG + chr7.1:34272614-34272633 None:intergenic 35.0%
CATATGGAAGAAAGAATGGT+GGG - chr7.1:34273301-34273320 MS.gene93688:CDS 35.0%
CCACCAATATTACCAAAGTT+TGG - chr7.1:34272599-34272618 MS.gene93688:CDS 35.0%
CTGAAGAACCAAGTTAAAGA+TGG - chr7.1:34273082-34273101 MS.gene93688:CDS 35.0%
CTGGAGTTACAGATATGTTT+AGG - chr7.1:34272747-34272766 MS.gene93688:CDS 35.0%
GAATTCACTGAGATAGCTAA+AGG - chr7.1:34273025-34273044 MS.gene93688:CDS 35.0%
GGATACAATCCTTAAATGGT+TGG - chr7.1:34272937-34272956 MS.gene93688:CDS 35.0%
GTAGAGATGAGCAAGATATT+TGG - chr7.1:34273439-34273458 MS.gene93688:CDS 35.0%
GTTCTTCAGAATCCAAAGAA+AGG + chr7.1:34273071-34273090 None:intergenic 35.0%
TATGGAGTGGAATTCTTAGT+TGG - chr7.1:34272668-34272687 MS.gene93688:CDS 35.0%
TCAGTGGTTTATGTTGCATT+TGG - chr7.1:34272977-34272996 MS.gene93688:CDS 35.0%
TCTTCATTGAATTGTAGCGA+CGG + chr7.1:34272899-34272918 None:intergenic 35.0%
TGGAAAGGTAACATAATGAG+TGG + chr7.1:34273256-34273275 None:intergenic 35.0%
! CCAAACTTTGGTAATATTGG+TGG + chr7.1:34272602-34272621 None:intergenic 35.0%
AGATATGGAACAACGTGTGT+TGG + chr7.1:34272482-34272501 None:intergenic 40.0%
ATTGAGATCAGTGATGGTAG+GGG - chr7.1:34273387-34273406 MS.gene93688:CDS 40.0%
CAAGCCAACCATCTTTAACT+TGG + chr7.1:34273093-34273112 None:intergenic 40.0%
CATTGAGATCAGTGATGGTA+GGG - chr7.1:34273386-34273405 MS.gene93688:CDS 40.0%
GAAATTCACAAGGGATTCAG+TGG - chr7.1:34273357-34273376 MS.gene93688:CDS 40.0%
GAGCAAGATATTTGGAGACA+AGG - chr7.1:34273447-34273466 MS.gene93688:CDS 40.0%
GTGATAGAGAGTCTTCAAGT+TGG - chr7.1:34273226-34273245 MS.gene93688:CDS 40.0%
TATGGAAGAAAGAATGGTGG+GGG - chr7.1:34273303-34273322 MS.gene93688:CDS 40.0%
TATTGCTGCAAGAAGTTGCA+TGG - chr7.1:34272799-34272818 MS.gene93688:CDS 40.0%
TGTGCTAAGATTCTCAACTG+TGG + chr7.1:34273163-34273182 None:intergenic 40.0%
TTAGCACATGAGTCTATTGG+TGG - chr7.1:34273175-34273194 MS.gene93688:CDS 40.0%
! AGGGTCAAAGAAACCCTTTT+TGG - chr7.1:34272767-34272786 MS.gene93688:CDS 40.0%
!! TAAGGCATTGAGATCAGTGA+TGG - chr7.1:34273381-34273400 MS.gene93688:CDS 40.0%
!!! GTTTTTTGACACACTGTGGT+TGG - chr7.1:34273197-34273216 MS.gene93688:CDS 40.0%
AATGCTTAGGAGCAGGGATA+TGG + chr7.1:34273519-34273538 None:intergenic 45.0%
AGAAGTTGCATGGAGGTTGA+AGG - chr7.1:34272809-34272828 MS.gene93688:CDS 45.0%
GCATTGAGATCAGTGATGGT+AGG - chr7.1:34273385-34273404 MS.gene93688:CDS 45.0%
TCATTGAATTGTAGCGACGG+TGG + chr7.1:34272896-34272915 None:intergenic 45.0%
! AGAAAGAATGGTGGGGGTAA+AGG - chr7.1:34273309-34273328 MS.gene93688:CDS 45.0%
!!! GGTGGTTTTTTGACACACTG+TGG - chr7.1:34273193-34273212 MS.gene93688:CDS 45.0%
CACAAGGGATTCAGTGGCTA+AGG - chr7.1:34273363-34273382 MS.gene93688:CDS 50.0%
GACGGTGGCAATAATCCAAC+TGG + chr7.1:34272881-34272900 None:intergenic 50.0%
TGCTGCAAGAAGTTGCATGG+AGG - chr7.1:34272802-34272821 MS.gene93688:CDS 50.0%
GAGATCAGTGATGGTAGGGG+AGG - chr7.1:34273390-34273409 MS.gene93688:CDS 55.0%
TCAGTGATGGTAGGGGAGGA+AGG - chr7.1:34273394-34273413 MS.gene93688:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 34272470 34273540 34272470 ID=MS.gene93688
chr7.1 mRNA 34272470 34273540 34272470 ID=MS.gene93688.t1;Parent=MS.gene93688
chr7.1 exon 34272470 34273540 34272470 ID=MS.gene93688.t1.exon1;Parent=MS.gene93688.t1
chr7.1 CDS 34272470 34273540 34272470 ID=cds.MS.gene93688.t1;Parent=MS.gene93688.t1
Gene Sequence

>MS.gene93688

ATGGACATTCCAACACACGTTGTTCCATATCTCAAGAAAGCTTTTGATGGTCTTCAACAACCTTTGATTGAATTTTTGGAAAAATTCAACCCTGATTGTATTATATATGACTTTGCACCTTATTGGTTACCACCAATATTACCAAAGTTTGGCATCTTAAGCATTTATTTCTCAATTTTTAGTGCAATTGGTATGTCTTATGGAGTGGAATTCTTAGTTGGAAAGTCAAATGATGAGGAGAATATTATTTCTAATGTCTACTTAGAACAAAATGAATCTGGAGTTACAGATATGTTTAGGGTCAAAGAAACCCTTTTTGGTGCTGATTTTATTGCTGCAAGAAGTTGCATGGAGGTTGAAGGTAAATATCTAGAAATAATTGAAAATCTATGCAAGAAAAAAGTGATTCCAGTTGGATTATTGCCACCGTCGCTACAATTCAATGAAGAAAAAAATGATGAAAATTGGGATACAATCCTTAAATGGTTGGATAAACATGAAAAAAGGTCAGTGGTTTATGTTGCATTTGGAAGTGAAGTTACACTAAGTGATGAAGAATTCACTGAGATAGCTAAAGGATTAGAATTATCTAGTTTTCCCTTTCTTTGGATTCTGAAGAACCAAGTTAAAGATGGTTGGCTTGTTGAGAACCAATCAAATAAGAAAGGATTGATTTGGAGTAATTGGGCACCACAGTTGAGAATCTTAGCACATGAGTCTATTGGTGGTTTTTTGACACACTGTGGTTGGAGTTCAGTGATAGAGAGTCTTCAAGTTGGATGTCCACTCATTATGTTACCTTTCCATAATGAGCAAAGTTTAGTTGCTAGACATATGGAAGAAAGAATGGTGGGGGTAAAGGTACAAAGAAATGATGAAAATGATGAGAAATTCACAAGGGATTCAGTGGCTAAGGCATTGAGATCAGTGATGGTAGGGGAGGAAGGAGAGAGTTATAGAAATAAAGCTGTAGAGATGAGCAAGATATTTGGAGACAAGGAGCTGCACCAAAAATATTTAGATGACTTTGTTGATTATGTGGAGCTCCATATCCCTGCTCCTAAGCATTAG

Protein sequence

>MS.gene93688.t1

MDIPTHVVPYLKKAFDGLQQPLIEFLEKFNPDCIIYDFAPYWLPPILPKFGILSIYFSIFSAIGMSYGVEFLVGKSNDEENIISNVYLEQNESGVTDMFRVKETLFGADFIAARSCMEVEGKYLEIIENLCKKKVIPVGLLPPSLQFNEEKNDENWDTILKWLDKHEKRSVVYVAFGSEVTLSDEEFTEIAKGLELSSFPFLWILKNQVKDGWLVENQSNKKGLIWSNWAPQLRILAHESIGGFLTHCGWSSVIESLQVGCPLIMLPFHNEQSLVARHMEERMVGVKVQRNDENDEKFTRDSVAKALRSVMVGEEGESYRNKAVEMSKIFGDKELHQKYLDDFVDYVELHIPAPKH