Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93765.t1 | XP_003631094.1 | 81.7 | 682 | 101 | 6 | 1 | 673 | 1 | 667 | 2.90E-241 | 844.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93765.t1 | B0F9L7 | 44.4 | 694 | 338 | 10 | 1 | 673 | 1 | 667 | 5.4e-103 | 376.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93765.t1 | G7LDC1 | 81.7 | 682 | 101 | 6 | 1 | 673 | 1 | 667 | 2.1e-241 | 844.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene93765 | 0.816361 | 5.75E-52 | -1.69E-46 |
| MS.gene049801 | MS.gene93765 | 0.811867 | 5.65E-51 | -1.69E-46 |
| MS.gene050084 | MS.gene93765 | 0.81043 | 1.16E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene93765 | 0.81787 | 2.64E-52 | -1.69E-46 |
| MS.gene050105 | MS.gene93765 | 0.806585 | 7.66E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene93765 | 0.812716 | 3.69E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene93765 | 0.821908 | 3.14E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene93765 | 0.802382 | 5.76E-49 | -1.69E-46 |
| MS.gene051209 | MS.gene93765 | 0.811052 | 8.49E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene93765 | 0.806054 | 9.91E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene93765 | 0.802235 | 6.18E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene93765 | 0.802772 | 4.79E-49 | -1.69E-46 |
| MS.gene052776 | MS.gene93765 | 0.813961 | 1.96E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene93765 | 0.806332 | 8.66E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene93765 | 0.829074 | 6.31E-55 | -1.69E-46 |
| MS.gene055864 | MS.gene93765 | 0.800511 | 1.39E-48 | -1.69E-46 |
| MS.gene055926 | MS.gene93765 | 0.818862 | 1.57E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene93765 | 0.845371 | 4.23E-59 | -1.69E-46 |
| MS.gene056181 | MS.gene93765 | 0.807378 | 5.20E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene93765 | 0.813053 | 3.11E-51 | -1.69E-46 |
| MS.gene057855 | MS.gene93765 | 0.806811 | 6.86E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene93765 | 0.800712 | 1.27E-48 | -1.69E-46 |
| MS.gene058010 | MS.gene93765 | 0.824594 | 7.42E-54 | -1.69E-46 |
| MS.gene058081 | MS.gene93765 | 0.819361 | 1.21E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene93765 | 0.829762 | 4.29E-55 | -1.69E-46 |
| MS.gene059283 | MS.gene93765 | 0.804284 | 2.33E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene93765 | 0.81891 | 1.53E-52 | -1.69E-46 |
| MS.gene060296 | MS.gene93765 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene060850 | MS.gene93765 | 0.811599 | 6.46E-51 | -1.69E-46 |
| MS.gene060851 | MS.gene93765 | 0.804236 | 2.38E-49 | -1.69E-46 |
| MS.gene060852 | MS.gene93765 | 0.801573 | 8.45E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene93765 | 0.833506 | 5.13E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene93765 | 0.823616 | 1.26E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene93765 | 0.825059 | 5.76E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene93765 | 0.820733 | 5.87E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93765.t1 | MTR_8g107060 | 89.766 | 684 | 42 | 9 | 1 | 673 | 1 | 667 | 0.0 | 1103 |
| MS.gene93765.t1 | MTR_8g107060 | 85.443 | 474 | 41 | 9 | 1 | 463 | 1 | 457 | 0.0 | 669 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93765.t1 | AT1G18190 | 45.965 | 694 | 327 | 10 | 1 | 673 | 1 | 667 | 7.83e-164 | 486 |
| MS.gene93765.t1 | AT2G19950 | 25.617 | 324 | 212 | 10 | 341 | 647 | 374 | 685 | 1.88e-14 | 77.4 |
| MS.gene93765.t1 | AT2G19950 | 25.617 | 324 | 212 | 10 | 341 | 647 | 377 | 688 | 2.16e-14 | 77.4 |
Find 153 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTCTCTCCCTCTAATT+TGG | 0.162742 | 4.2:-348576 | None:intergenic |
| AGTAATTCTGGTGAATTTAA+TGG | 0.240169 | 4.2:-348218 | None:intergenic |
| CAGAGGTTAGACTCTCTTAA+AGG | 0.251513 | 4.2:+348014 | MS.gene93765:CDS |
| CAACTGAAAACTGTGATAAA+AGG | 0.253903 | 4.2:+348323 | MS.gene93765:CDS |
| TTTCTTGCCAGAGTGAATTC+TGG | 0.261809 | 4.2:-353070 | None:intergenic |
| GGTATGAGGGTTAGATGATT+TGG | 0.269832 | 4.2:-347829 | None:intergenic |
| TGATAAAGTTGCACAATTAC+AGG | 0.276409 | 4.2:+351805 | MS.gene93765:CDS |
| TCTTACACGTTTAGCTAAAC+TGG | 0.279886 | 4.2:+349057 | MS.gene93765:CDS |
| CGTGAAGCTCCAGTTTGATT+AGG | 0.306354 | 4.2:-351487 | None:intergenic |
| TCCTCTTCCAGCAGTAATTC+TGG | 0.307191 | 4.2:-348230 | None:intergenic |
| TTTGAAAAGGGGTTCTTCTA+TGG | 0.327602 | 4.2:+348391 | MS.gene93765:CDS |
| AGGGACACCACTACCTGATT+TGG | 0.332817 | 4.2:-347694 | None:intergenic |
| ATACCTCAATTCGAAATATA+AGG | 0.334475 | 4.2:-352827 | None:intergenic |
| GTATGAGGGTTAGATGATTT+GGG | 0.334545 | 4.2:-347828 | None:intergenic |
| GCAGGCAGTGTCGAGGTTGC+TGG | 0.336792 | 4.2:+352933 | MS.gene93765:intron |
| ATTGTTATCAGTTGGGAGTT+TGG | 0.342524 | 4.2:-347748 | None:intergenic |
| ACTGATAACAATGATTATAA+TGG | 0.347618 | 4.2:+347759 | MS.gene93765:CDS |
| CCTTGTTTGCCTTCATTTGT+GGG | 0.349044 | 4.2:+353191 | MS.gene93765:CDS |
| CACGTCACAGGCAAGGAAAC+TGG | 0.353827 | 4.2:+352361 | MS.gene93765:intron |
| ACGTGTAAGAATTTCCATTC+TGG | 0.361453 | 4.2:-349044 | None:intergenic |
| CAAATCATTAGATGTTGAAT+TGG | 0.365479 | 4.2:-348372 | None:intergenic |
| GTTCTCGGCGGCTTTAAGTT+TGG | 0.370618 | 4.2:-347476 | None:intergenic |
| CAAATCAAACCATGGCGAAT+TGG | 0.373004 | 4.2:+347446 | None:intergenic |
| GTAATTCTGGTGAATTTAAT+GGG | 0.379706 | 4.2:-348217 | None:intergenic |
| CAACATCTAATGATTTGAAA+AGG | 0.394443 | 4.2:+348378 | MS.gene93765:CDS |
| TCACCGTCTGTAATGGTATG+AGG | 0.401110 | 4.2:-347843 | None:intergenic |
| AACATCTAATGATTTGAAAA+GGG | 0.404734 | 4.2:+348379 | MS.gene93765:CDS |
| CAACGAGAGGCTTCAATTAG+AGG | 0.405870 | 4.2:+347644 | MS.gene93765:CDS |
| ATTGATGCTCCTCCCAAATC+AGG | 0.406561 | 4.2:+347681 | MS.gene93765:CDS |
| GGTGGATTTAGCATCAGTTT+CGG | 0.410217 | 4.2:-348123 | None:intergenic |
| AAAGGAGAAAGAAGAGAGAA+AGG | 0.412621 | 4.2:+348489 | MS.gene93765:CDS |
| ACCTTGTTTGCCTTCATTTG+TGG | 0.413395 | 4.2:+353190 | MS.gene93765:CDS |
| TCATCAAGTGACTTAGAATC+TGG | 0.414826 | 4.2:+353003 | MS.gene93765:CDS |
| AGTTGACTGCCAACATCTAC+AGG | 0.415643 | 4.2:-348305 | None:intergenic |
| GTGAACATGAGAGGGAAGAA+AGG | 0.415835 | 4.2:+348471 | MS.gene93765:CDS |
| GAATATAGTGGCCAAATTAG+AGG | 0.423712 | 4.2:+348565 | MS.gene93765:CDS |
| TATAATCATTGTTATCAGTT+GGG | 0.430994 | 4.2:-347755 | None:intergenic |
| CTTCTTCCGCTTCCACTGAT+AGG | 0.431977 | 4.2:+348084 | MS.gene93765:CDS |
| GCCAACATCTACAGGGAACT+TGG | 0.432798 | 4.2:-348297 | None:intergenic |
| AAGCCTTATATTTCGAATTG+AGG | 0.434217 | 4.2:+352824 | MS.gene93765:CDS |
| GGGACACCACTACCTGATTT+GGG | 0.443877 | 4.2:-347693 | None:intergenic |
| CGCCGAGAACATTCTCCATC+AGG | 0.444439 | 4.2:+347489 | MS.gene93765:CDS |
| ATACCATTACAGACGGTGAT+TGG | 0.448759 | 4.2:+347847 | MS.gene93765:CDS |
| CCTCTGCAAAGAGGTTGAAC+TGG | 0.458367 | 4.2:-347997 | None:intergenic |
| AATCAATGTTATCAAGGAAA+AGG | 0.460558 | 4.2:+348541 | MS.gene93765:CDS |
| AGTTGCACAATTACAGGAAA+AGG | 0.462451 | 4.2:+351811 | MS.gene93765:CDS |
| GGGAGGAGCATCAATACTAC+TGG | 0.462532 | 4.2:-347673 | None:intergenic |
| TGCCTTAAAATACGAGGTGC+AGG | 0.463149 | 4.2:-347909 | None:intergenic |
| AACTGAAAACTGTGATAAAA+GGG | 0.464363 | 4.2:+348324 | MS.gene93765:CDS |
| CCATCGGATGAGGGTAGATC+TGG | 0.471208 | 4.2:+353243 | MS.gene93765:CDS |
| CACTCTGGCAAGAAACAGCT+GGG | 0.475094 | 4.2:+353078 | MS.gene93765:CDS |
| ACATTCTAGCCCATCGGATG+AGG | 0.478457 | 4.2:+353233 | MS.gene93765:CDS |
| AGTGGTAAATCTAGTGATGA+TGG | 0.478641 | 4.2:+348047 | MS.gene93765:CDS |
| TCACTCTGGCAAGAAACAGC+TGG | 0.479710 | 4.2:+353077 | MS.gene93765:CDS |
| TATAAATCACCCACAAATGA+AGG | 0.480480 | 4.2:-353200 | None:intergenic |
| TTGAGGAATCCTAATCAAAC+TGG | 0.483034 | 4.2:+351478 | MS.gene93765:CDS |
| AGCTCAACTTCAACTTCCGT+TGG | 0.487013 | 4.2:-352422 | None:intergenic |
| ACAGAAAGGCAATACCAGTA+AGG | 0.487654 | 4.2:+348252 | MS.gene93765:CDS |
| TTGCCGCTGCTCTCTCAGCT+AGG | 0.488439 | 4.2:-348514 | None:intergenic |
| GTTGAGACCAAGGTAGATCA+TGG | 0.490319 | 4.2:+348191 | MS.gene93765:CDS |
| ATCTGGTGCCGTGATCTCAT+TGG | 0.491967 | 4.2:+353260 | MS.gene93765:CDS |
| TGACTTAGAATCTGGATTGT+GGG | 0.493062 | 4.2:+353011 | MS.gene93765:CDS |
| GACGAGAACATGTCAGTCTC+AGG | 0.493799 | 4.2:+352955 | MS.gene93765:CDS |
| AAAAGCAATCAATGTTATCA+AGG | 0.496877 | 4.2:+348535 | MS.gene93765:CDS |
| GGAACTCAACGGCAAAATTG+TGG | 0.498403 | 4.2:+353157 | MS.gene93765:CDS |
| TTATAATCATTGTTATCAGT+TGG | 0.498482 | 4.2:-347756 | None:intergenic |
| TGCTAAATCCACCAGAGGAC+AGG | 0.500161 | 4.2:+348133 | MS.gene93765:CDS |
| ACTAACAGATTCCTGTCCTC+TGG | 0.501207 | 4.2:-348144 | None:intergenic |
| TGCCTGATGGAGAATGTTCT+CGG | 0.504796 | 4.2:-347491 | None:intergenic |
| GAACTCAACGGCAAAATTGT+GGG | 0.509128 | 4.2:+353158 | MS.gene93765:CDS |
| ATGCTGTAGCTAGCTTCAAA+AGG | 0.509152 | 4.2:+351734 | MS.gene93765:intron |
| AGTCCAATCACCGTCTGTAA+TGG | 0.515861 | 4.2:-347850 | None:intergenic |
| GCAGCTTCAGAGCACTATGA+TGG | 0.516795 | 4.2:+348976 | MS.gene93765:CDS |
| ACATCTAATGATTTGAAAAG+GGG | 0.518633 | 4.2:+348380 | MS.gene93765:CDS |
| AAGTCACTTGATGATGAGGC+AGG | 0.519583 | 4.2:-352994 | None:intergenic |
| TTAAATGATCAGTCATCTGA+TGG | 0.521059 | 4.2:-352457 | None:intergenic |
| ATTCCTCTTGATATCAGAAA+CGG | 0.531281 | 4.2:-347958 | None:intergenic |
| TAGAGCTCAGAAGGAGCTTG+AGG | 0.532289 | 4.2:+351461 | MS.gene93765:intron |
| TCTTGAATTGATCTTTGAGA+GGG | 0.535675 | 4.2:-347713 | None:intergenic |
| ACCAGAATTACTGCTGGAAG+AGG | 0.536737 | 4.2:+348229 | MS.gene93765:CDS |
| AACAATGGAAGCTGTTGAGT+TGG | 0.537487 | 4.2:+349000 | MS.gene93765:CDS |
| AAATTCACCAGAATTACTGC+TGG | 0.539129 | 4.2:+348223 | MS.gene93765:CDS |
| TCTACCTTGGTCTCAACCAC+AGG | 0.540146 | 4.2:-348185 | None:intergenic |
| TCTGATTCAGATACGGACTC+TGG | 0.541807 | 4.2:+348428 | MS.gene93765:CDS |
| CAAGGAAAAGGAGAATATAG+TGG | 0.542419 | 4.2:+348553 | MS.gene93765:CDS |
| AGAAAGGCAATACCAGTAAG+GGG | 0.544933 | 4.2:+348254 | MS.gene93765:CDS |
| GTGACTTAGAATCTGGATTG+TGG | 0.546448 | 4.2:+353010 | MS.gene93765:CDS |
| TGAATCAGAACTTCCATCAC+TGG | 0.547149 | 4.2:-348414 | None:intergenic |
| TGGGTGCCCATGATCTACCT+TGG | 0.548798 | 4.2:-348198 | None:intergenic |
| GAAGGAGATAGAAGAGCCAA+CGG | 0.549566 | 4.2:+352406 | MS.gene93765:CDS |
| CCAGATCTACCCTCATCCGA+TGG | 0.552413 | 4.2:-353243 | None:intergenic |
| CCCACAAATGAAGGCAAACA+AGG | 0.552936 | 4.2:-353191 | None:intergenic |
| CAGAAAGGCAATACCAGTAA+GGG | 0.554124 | 4.2:+348253 | MS.gene93765:CDS |
| TTCTTGAATTGATCTTTGAG+AGG | 0.554314 | 4.2:-347714 | None:intergenic |
| GGACGGACGGACTTGCCTGA+TGG | 0.555391 | 4.2:-347504 | None:intergenic |
| TATCCGTTTCTGATATCAAG+AGG | 0.555425 | 4.2:+347955 | MS.gene93765:CDS |
| TTCTGAAAGTGAACATGAGA+GGG | 0.561577 | 4.2:+348463 | MS.gene93765:CDS |
| GGTTCTTCTATGGCCAGTGA+TGG | 0.561688 | 4.2:+348401 | MS.gene93765:CDS |
| AAAACATAATAATACCAGAA+TGG | 0.563142 | 4.2:+349030 | MS.gene93765:CDS |
| TTCTAAGTCACTTGATGATG+AGG | 0.568130 | 4.2:-352998 | None:intergenic |
| TGATATTGAAATGACAAGGA+AGG | 0.568874 | 4.2:+352388 | MS.gene93765:CDS |
| AGCTAAACAACAAGCACAAG+AGG | 0.569063 | 4.2:+348625 | MS.gene93765:CDS |
| AACAGATTCCTGTCCTCTGG+TGG | 0.570849 | 4.2:-348141 | None:intergenic |
| AATATAGTGGCCAAATTAGA+GGG | 0.570966 | 4.2:+348566 | MS.gene93765:CDS |
| AGACTGCCTATCAGTGGAAG+CGG | 0.571112 | 4.2:-348090 | None:intergenic |
| GCCAAGTTCCCTGTAGATGT+TGG | 0.572119 | 4.2:+348296 | MS.gene93765:CDS |
| CACCGTCTGTAATGGTATGA+GGG | 0.575272 | 4.2:-347842 | None:intergenic |
| GTTCCACTGTACAGCTGCGA+GGG | 0.576044 | 4.2:-349248 | None:intergenic |
| GAGCACTATGATGGAAACAA+TGG | 0.577666 | 4.2:+348985 | MS.gene93765:CDS |
| CAGATCTACCCTCATCCGAT+GGG | 0.578444 | 4.2:-353242 | None:intergenic |
| GCTCCTCCCAAATCAGGTAG+TGG | 0.580464 | 4.2:+347687 | MS.gene93765:CDS |
| TGAATCACTCTCATCTGAGA+AGG | 0.584178 | 4.2:+352800 | MS.gene93765:CDS |
| TACATTAGACTGCCTATCAG+TGG | 0.588488 | 4.2:-348096 | None:intergenic |
| TATGTTCTCCAATGAGATCA+CGG | 0.591089 | 4.2:-353268 | None:intergenic |
| CATTCTAGCCCATCGGATGA+GGG | 0.591091 | 4.2:+353234 | MS.gene93765:CDS |
| TAAACCTGTGGTTGAGACCA+AGG | 0.593088 | 4.2:+348181 | MS.gene93765:CDS |
| TGGAAGTTCTGATTCAGATA+CGG | 0.593981 | 4.2:+348421 | MS.gene93765:CDS |
| TAAATCTAGTGATGATGGCA+AGG | 0.595423 | 4.2:+348052 | MS.gene93765:CDS |
| TTGGAGAACATAAATAACAC+TGG | 0.599980 | 4.2:+353279 | MS.gene93765:CDS |
| TTTAATACAGAAACAAGCTA+AGG | 0.604266 | 4.2:+352475 | MS.gene93765:CDS |
| ATTCTGAAAGTGAACATGAG+AGG | 0.605224 | 4.2:+348462 | MS.gene93765:CDS |
| AAGTCTAGAGAAAATACTTG+AGG | 0.605238 | 4.2:+348598 | MS.gene93765:CDS |
| GATGTCACATTCTAGCCCAT+CGG | 0.605593 | 4.2:+353227 | MS.gene93765:CDS |
| GGAAGAGATCCAATTCGCCA+TGG | 0.607085 | 4.2:-347455 | None:intergenic |
| ACTGCTGGAAGAGGACAGAA+AGG | 0.610482 | 4.2:+348238 | MS.gene93765:CDS |
| CTAAAAGCCAGAATTCACTC+TGG | 0.613940 | 4.2:+353063 | MS.gene93765:CDS |
| TCAAAAGAGTCTGTTCATGA+AGG | 0.614287 | 4.2:+349821 | MS.gene93765:CDS |
| CCAGTTCAACCTCTTTGCAG+AGG | 0.614997 | 4.2:+347997 | MS.gene93765:CDS |
| GATCCCTCGCAGCTGTACAG+TGG | 0.620209 | 4.2:+349245 | MS.gene93765:CDS |
| ACAGTGGAACCTTGAAGTAG+AGG | 0.622799 | 4.2:+349261 | MS.gene93765:CDS |
| AACCCTCATACCATTACAGA+CGG | 0.623290 | 4.2:+347840 | MS.gene93765:CDS |
| GGCACAGCGTTAGAAGCAGA+AGG | 0.628458 | 4.2:-347888 | None:intergenic |
| AGAGTCTAACCTCTGCAAAG+AGG | 0.633980 | 4.2:-348006 | None:intergenic |
| TTGAGACCAAGGTAGATCAT+GGG | 0.643453 | 4.2:+348192 | MS.gene93765:CDS |
| GAAAGGCAATACCAGTAAGG+GGG | 0.650132 | 4.2:+348255 | MS.gene93765:CDS |
| TACACGTTTAGCTAAACTGG+AGG | 0.651008 | 4.2:+349060 | MS.gene93765:CDS |
| TTGAAGTTGAGCTCAAACGT+AGG | 0.651952 | 4.2:+352432 | MS.gene93765:CDS |
| GGTTCCACTGTACAGCTGCG+AGG | 0.655101 | 4.2:-349249 | None:intergenic |
| TAACACTTCTGATAAACCTG+TGG | 0.658996 | 4.2:+348169 | MS.gene93765:CDS |
| CACTTCGTAAGAACAACGAG+AGG | 0.664611 | 4.2:+347631 | MS.gene93765:CDS |
| TGACTCAGCAGGCAGTGTCG+AGG | 0.666460 | 4.2:+352926 | MS.gene93765:intron |
| AAGCTGATATTGAAATGACA+AGG | 0.671405 | 4.2:+352384 | MS.gene93765:CDS |
| AAAGGCAATACCAGTAAGGG+GGG | 0.672770 | 4.2:+348256 | MS.gene93765:CDS |
| TGAAAACTGTGATAAAAGGG+AGG | 0.690336 | 4.2:+348327 | MS.gene93765:CDS |
| TCAGATCGATCAACAAGCGG+CGG | 0.690403 | 4.2:+347605 | MS.gene93765:intron |
| GTTGACTGCCAACATCTACA+GGG | 0.691069 | 4.2:-348304 | None:intergenic |
| GATCCTAGCTGAGAGAGCAG+CGG | 0.698731 | 4.2:+348511 | MS.gene93765:CDS |
| GTTTGAACGAGAAATTCTTG+AGG | 0.701624 | 4.2:+351763 | MS.gene93765:CDS |
| GGTTCAGATCGATCAACAAG+CGG | 0.710542 | 4.2:+347602 | MS.gene93765:intron |
| ACACCACTACCTGATTTGGG+AGG | 0.718685 | 4.2:-347690 | None:intergenic |
| ACTCTGGCAAGAAACAGCTG+GGG | 0.721667 | 4.2:+353079 | MS.gene93765:CDS |
| ACTGATGCTAAATCCACCAG+AGG | 0.728447 | 4.2:+348128 | MS.gene93765:CDS |
| CTGATGGAGAATGTTCTCGG+CGG | 0.777389 | 4.2:-347488 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAAAATCATAATTAAAAA+AGG | - | chr4.2:352163-352182 | None:intergenic | 10.0% |
| !! | TAGAAATTAAATAAGAAAAT+AGG | - | chr4.2:347557-347576 | None:intergenic | 10.0% |
| !! | TTAAAAAGTAAAATAAGAAA+TGG | - | chr4.2:349924-349943 | None:intergenic | 10.0% |
| !!! | AATAAACTTTTTTAACATAA+AGG | - | chr4.2:352767-352786 | None:intergenic | 10.0% |
| !!! | CTTTTTTAATTATGATTTTT+AGG | + | chr4.2:352161-352180 | MS.gene93765:intron | 10.0% |
| !! | AAAGATACATCTTAAAATTT+GGG | - | chr4.2:351359-351378 | None:intergenic | 15.0% |
| !! | ATTAAAAGTGAATACATAAA+AGG | + | chr4.2:350089-350108 | MS.gene93765:intron | 15.0% |
| !! | ATTTAATTATTATGTAGTGT+TGG | + | chr4.2:350857-350876 | MS.gene93765:intron | 15.0% |
| !! | CACAAAAAATGTTTAAAAAA+GGG | - | chr4.2:351643-351662 | None:intergenic | 15.0% |
| !! | CATGTTAAAATCAATTATAA+AGG | + | chr4.2:352102-352121 | MS.gene93765:intron | 15.0% |
| !! | CTACATAATAATTAAATCTT+TGG | - | chr4.2:350854-350873 | None:intergenic | 15.0% |
| !! | TCACAAAAAATGTTTAAAAA+AGG | - | chr4.2:351644-351663 | None:intergenic | 15.0% |
| !! | TGAAACAAATATATAAATCA+TGG | - | chr4.2:350200-350219 | None:intergenic | 15.0% |
| !!! | ACAATTAGATTATATTTTTG+TGG | + | chr4.2:353113-353132 | MS.gene93765:CDS | 15.0% |
| !!! | ATTGTTAATTTTTTTGTTGT+TGG | + | chr4.2:351126-351145 | MS.gene93765:intron | 15.0% |
| !! | AAAACATAATAATACCAGAA+TGG | + | chr4.2:349030-349049 | MS.gene93765:CDS | 20.0% |
| !! | AAAAGTTTATTCTTGTTAAC+AGG | + | chr4.2:352776-352795 | MS.gene93765:intron | 20.0% |
| !! | AACATCTAATGATTTGAAAA+GGG | + | chr4.2:348379-348398 | MS.gene93765:CDS | 20.0% |
| !! | ACTGATAACAATGATTATAA+TGG | + | chr4.2:347759-347778 | MS.gene93765:CDS | 20.0% |
| !! | AGCTCTTAATAACAAAAAAA+AGG | + | chr4.2:350262-350281 | MS.gene93765:intron | 20.0% |
| !! | AGTTTGTAAAAATCTTTCTT+GGG | + | chr4.2:352617-352636 | MS.gene93765:intron | 20.0% |
| !! | ATGGTTGAAATAAAATATAC+TGG | - | chr4.2:350145-350164 | None:intergenic | 20.0% |
| !! | CAAAGATACATCTTAAAATT+TGG | - | chr4.2:351360-351379 | None:intergenic | 20.0% |
| !! | CTTAATAACAAAAAAAAGGT+TGG | + | chr4.2:350266-350285 | MS.gene93765:intron | 20.0% |
| !! | TATAATCATTGTTATCAGTT+GGG | - | chr4.2:347758-347777 | None:intergenic | 20.0% |
| !! | TTAGAATGAGAATCTTATAT+TGG | + | chr4.2:349672-349691 | MS.gene93765:intron | 20.0% |
| !! | TTATAATCATTGTTATCAGT+TGG | - | chr4.2:347759-347778 | None:intergenic | 20.0% |
| !!! | ATTCACTTTTAATTACACAA+CGG | - | chr4.2:350082-350101 | None:intergenic | 20.0% |
| !!! | CTTTACTTTGAAATTAATCA+CGG | + | chr4.2:348867-348886 | MS.gene93765:intron | 20.0% |
| !!! | TTTGTCTAGAAGTATAAAAT+TGG | + | chr4.2:351937-351956 | MS.gene93765:intron | 20.0% |
| ! | AAAAGCAATCAATGTTATCA+AGG | + | chr4.2:348535-348554 | MS.gene93765:CDS | 25.0% |
| ! | AACCACTTATAAGAAATACT+TGG | - | chr4.2:351286-351305 | None:intergenic | 25.0% |
| ! | AACTGAAAACTGTGATAAAA+GGG | + | chr4.2:348324-348343 | MS.gene93765:CDS | 25.0% |
| ! | AAGCTTGAAAATTATCCTTA+TGG | - | chr4.2:350299-350318 | None:intergenic | 25.0% |
| ! | AATCAATGTTATCAAGGAAA+AGG | + | chr4.2:348541-348560 | MS.gene93765:CDS | 25.0% |
| ! | AATGCAAAACTTAATGAAGT+TGG | - | chr4.2:352287-352306 | None:intergenic | 25.0% |
| ! | ACATCTAATGATTTGAAAAG+GGG | + | chr4.2:348380-348399 | MS.gene93765:CDS | 25.0% |
| ! | AGATAAGTTCTTCAGTTAAT+TGG | - | chr4.2:349521-349540 | None:intergenic | 25.0% |
| ! | AGCTTGAAAATTATCCTTAT+GGG | - | chr4.2:350298-350317 | None:intergenic | 25.0% |
| ! | AGTAATTCTGGTGAATTTAA+TGG | - | chr4.2:348221-348240 | None:intergenic | 25.0% |
| ! | ATACATCTTAAAATTTGGGT+TGG | - | chr4.2:351355-351374 | None:intergenic | 25.0% |
| ! | ATACCTCAATTCGAAATATA+AGG | - | chr4.2:352830-352849 | None:intergenic | 25.0% |
| ! | ATAGGAAATTGATTGATTGA+TGG | - | chr4.2:347539-347558 | None:intergenic | 25.0% |
| ! | ATATGCACAACAATTACTTT+AGG | + | chr4.2:350338-350357 | MS.gene93765:intron | 25.0% |
| ! | ATTGATTGATTGATGGAAAA+TGG | - | chr4.2:347532-347551 | None:intergenic | 25.0% |
| ! | CAAACAGAATGAAAACAATA+TGG | - | chr4.2:349958-349977 | None:intergenic | 25.0% |
| ! | CAAATCATTAGATGTTGAAT+TGG | - | chr4.2:348375-348394 | None:intergenic | 25.0% |
| ! | CAACATCTAATGATTTGAAA+AGG | + | chr4.2:348378-348397 | MS.gene93765:CDS | 25.0% |
| ! | CAGTTTGTAAAAATCTTTCT+TGG | + | chr4.2:352616-352635 | MS.gene93765:intron | 25.0% |
| ! | CTATCAAAAGACACAATTAA+TGG | - | chr4.2:350164-350183 | None:intergenic | 25.0% |
| ! | CTTTGCAAATTGGTTATTTA+GGG | + | chr4.2:351375-351394 | MS.gene93765:intron | 25.0% |
| ! | GATAATCTTGTAAATGTTTG+TGG | + | chr4.2:348747-348766 | MS.gene93765:intron | 25.0% |
| ! | GATATTCTCAAACAAAGAAA+GGG | - | chr4.2:350750-350769 | None:intergenic | 25.0% |
| ! | GCAAAAATATTACATCTAAC+TGG | - | chr4.2:352517-352536 | None:intergenic | 25.0% |
| ! | GTAATTCTGGTGAATTTAAT+GGG | - | chr4.2:348220-348239 | None:intergenic | 25.0% |
| ! | TAAATAGTTTCAACCTCTAA+GGG | + | chr4.2:352136-352155 | MS.gene93765:intron | 25.0% |
| ! | TAAGATGTATCTTTGCAAAT+TGG | + | chr4.2:351365-351384 | MS.gene93765:intron | 25.0% |
| ! | TAATTCAACCATTACAAAAC+CGG | - | chr4.2:351023-351042 | None:intergenic | 25.0% |
| ! | TCTTTGCAAATTGGTTATTT+AGG | + | chr4.2:351374-351393 | MS.gene93765:intron | 25.0% |
| ! | TGGAAAATGAATGAACATAA+CGG | - | chr4.2:351860-351879 | None:intergenic | 25.0% |
| ! | TGTTTAAAAAAGGGAATATG+TGG | - | chr4.2:351634-351653 | None:intergenic | 25.0% |
| ! | TTATGATATGTTATTGGATC+AGG | + | chr4.2:349763-349782 | MS.gene93765:intron | 25.0% |
| ! | TTGCAATCACAAAATCTTTA+GGG | - | chr4.2:349634-349653 | None:intergenic | 25.0% |
| ! | TTTAATACAGAAACAAGCTA+AGG | + | chr4.2:352475-352494 | MS.gene93765:CDS | 25.0% |
| ! | TTTGCAATCACAAAATCTTT+AGG | - | chr4.2:349635-349654 | None:intergenic | 25.0% |
| !! | CATTAATTGTGTCTTTTGAT+AGG | + | chr4.2:350162-350181 | MS.gene93765:intron | 25.0% |
| !! | CTTAAAGGAGAAAATTTTAG+TGG | + | chr4.2:348029-348048 | MS.gene93765:CDS | 25.0% |
| !! | GCAACGTATTTCATTATTTT+TGG | + | chr4.2:351903-351922 | MS.gene93765:intron | 25.0% |
| !! | TCATAGAATACAAGATGTTT+TGG | + | chr4.2:349326-349345 | MS.gene93765:intron | 25.0% |
| !! | TGTATTAAATCTTTGAAAGC+AGG | + | chr4.2:350037-350056 | MS.gene93765:intron | 25.0% |
| !! | TGTTGCTTATGATATGTTAT+TGG | + | chr4.2:349757-349776 | MS.gene93765:intron | 25.0% |
| !! | TTTAAGTTCTTGTGTTATAC+TGG | + | chr4.2:348691-348710 | MS.gene93765:intron | 25.0% |
| !!! | AAAATAGACTTGTTACTACT+TGG | + | chr4.2:349384-349403 | MS.gene93765:intron | 25.0% |
| !!! | AACAAAAAAAAGGTTGGTAT+AGG | + | chr4.2:350272-350291 | MS.gene93765:intron | 25.0% |
| !!! | AAGAATCACTGTTTTAATTC+AGG | + | chr4.2:352545-352564 | MS.gene93765:intron | 25.0% |
| !!! | ATGTTGATTCAACGTTTTTA+AGG | + | chr4.2:349084-349103 | MS.gene93765:intron | 25.0% |
| !!! | ATTTGTTCTCTGAAACATTA+GGG | + | chr4.2:349868-349887 | MS.gene93765:intron | 25.0% |
| !!! | TTAGATTATATTTTTGTGGC+TGG | + | chr4.2:353117-353136 | MS.gene93765:CDS | 25.0% |
| !!! | TTTTTTTTCTCGAAGTAATC+AGG | + | chr4.2:350119-350138 | MS.gene93765:intron | 25.0% |
| AAAAATGTCCTAAATACTGC+TGG | + | chr4.2:349567-349586 | MS.gene93765:intron | 30.0% | |
| AAAATGTCCTAAATACTGCT+GGG | + | chr4.2:349568-349587 | MS.gene93765:intron | 30.0% | |
| AAACAGTGAAAACTTGATGA+GGG | - | chr4.2:348824-348843 | None:intergenic | 30.0% | |
| AAATCAATGACTTTGCAAAG+CGG | - | chr4.2:349852-349871 | None:intergenic | 30.0% | |
| AAATTAACAATCAGACCCTA+TGG | - | chr4.2:351117-351136 | None:intergenic | 30.0% | |
| AACTGTTTGAACAAAATACG+CGG | + | chr4.2:350391-350410 | MS.gene93765:intron | 30.0% | |
| AAGCAGGAAACAAATTGAAA+AGG | + | chr4.2:350053-350072 | MS.gene93765:intron | 30.0% | |
| AAGCTGATATTGAAATGACA+AGG | + | chr4.2:352384-352403 | MS.gene93765:CDS | 30.0% | |
| AAGTCTAGAGAAAATACTTG+AGG | + | chr4.2:348598-348617 | MS.gene93765:CDS | 30.0% | |
| AATATAGTGGCCAAATTAGA+GGG | + | chr4.2:348566-348585 | MS.gene93765:CDS | 30.0% | |
| AATTAAAAAAGGTCCCTTAG+AGG | - | chr4.2:352152-352171 | None:intergenic | 30.0% | |
| AATTAACAATCAGACCCTAT+GGG | - | chr4.2:351116-351135 | None:intergenic | 30.0% | |
| AATTCACCCAAACACATAAT+TGG | + | chr4.2:352726-352745 | MS.gene93765:intron | 30.0% | |
| AGCTTGTAGACTAATACTTA+AGG | - | chr4.2:350246-350265 | None:intergenic | 30.0% | |
| ATCAACAAATCAGTCTGATA+TGG | + | chr4.2:352656-352675 | MS.gene93765:intron | 30.0% | |
| ATTCACCCAAACACATAATT+GGG | + | chr4.2:352727-352746 | MS.gene93765:intron | 30.0% | |
| ATTCCTCTTGATATCAGAAA+CGG | - | chr4.2:347961-347980 | None:intergenic | 30.0% | |
| ATTGATTGATGGAAAATGGA+CGG | - | chr4.2:347528-347547 | None:intergenic | 30.0% | |
| CAAAGTAAAGTCATCCTATT+AGG | - | chr4.2:348857-348876 | None:intergenic | 30.0% | |
| CAACTGAAAACTGTGATAAA+AGG | + | chr4.2:348323-348342 | MS.gene93765:CDS | 30.0% | |
| CTAAAAATACCTCTACTTCA+AGG | - | chr4.2:349273-349292 | None:intergenic | 30.0% | |
| GATTCTTTCACATTCAGTTA+AGG | - | chr4.2:352080-352099 | None:intergenic | 30.0% | |
| GCATATCTCATCATTCAAAT+CGG | + | chr4.2:351307-351326 | MS.gene93765:intron | 30.0% | |
| GGATATTCTCAAACAAAGAA+AGG | - | chr4.2:350751-350770 | None:intergenic | 30.0% | |
| GTAAATAGTTTCAACCTCTA+AGG | + | chr4.2:352135-352154 | MS.gene93765:intron | 30.0% | |
| TAACCCAAATTCGAATAATG+TGG | - | chr4.2:350492-350511 | None:intergenic | 30.0% | |
| TACTACAACAAAAGAAACAG+AGG | - | chr4.2:351965-351984 | None:intergenic | 30.0% | |
| TATAAATCACCCACAAATGA+AGG | - | chr4.2:353203-353222 | None:intergenic | 30.0% | |
| TCAAAGTCTATGATTTCTCT+TGG | + | chr4.2:352314-352333 | MS.gene93765:intron | 30.0% | |
| TCACTGATAATTGTATGGAT+TGG | + | chr4.2:349194-349213 | MS.gene93765:intron | 30.0% | |
| TGAAATATCATAGCTCTTCA+TGG | - | chr4.2:351880-351899 | None:intergenic | 30.0% | |
| TGATAAAGTTGCACAATTAC+AGG | + | chr4.2:351805-351824 | MS.gene93765:CDS | 30.0% | |
| TGATATTGAAATGACAAGGA+AGG | + | chr4.2:352388-352407 | MS.gene93765:CDS | 30.0% | |
| TGCCAAGTATTTCTTATAAG+TGG | + | chr4.2:351281-351300 | MS.gene93765:intron | 30.0% | |
| TGGTACTTATCACAAAGATT+TGG | + | chr4.2:349404-349423 | MS.gene93765:intron | 30.0% | |
| TTAAATGATCAGTCATCTGA+TGG | - | chr4.2:352460-352479 | None:intergenic | 30.0% | |
| TTAGTATCCAATTAAAGGAC+AGG | + | chr4.2:350414-350433 | MS.gene93765:intron | 30.0% | |
| TTAGTTACTGAAGAGAACAA+TGG | + | chr4.2:350366-350385 | MS.gene93765:intron | 30.0% | |
| TTCTTGAATTGATCTTTGAG+AGG | - | chr4.2:347717-347736 | None:intergenic | 30.0% | |
| TTGAGATTATGTTGTGATGA+GGG | + | chr4.2:351409-351428 | MS.gene93765:intron | 30.0% | |
| TTGATATTGTAACTTGAGCT+AGG | + | chr4.2:350656-350675 | MS.gene93765:intron | 30.0% | |
| TTGGAGAACATAAATAACAC+TGG | + | chr4.2:353279-353298 | MS.gene93765:CDS | 30.0% | |
| ! | AAATTGGTTATTTAGGGTAC+TGG | + | chr4.2:351381-351400 | MS.gene93765:intron | 30.0% |
| ! | AAGCCTTATATTTCGAATTG+AGG | + | chr4.2:352824-352843 | MS.gene93765:CDS | 30.0% |
| ! | AAGTTTGCTTCAAACCTAAA+TGG | - | chr4.2:350440-350459 | None:intergenic | 30.0% |
| ! | ACATTATTCGAATTTGGGTT+AGG | + | chr4.2:350491-350510 | MS.gene93765:intron | 30.0% |
| ! | AGAGAGCATAAGTTTAAGAA+AGG | - | chr4.2:351672-351691 | None:intergenic | 30.0% |
| ! | CTATTTTGCCTTAAAATACG+AGG | - | chr4.2:347918-347937 | None:intergenic | 30.0% |
| ! | GAGAGCATAAGTTTAAGAAA+GGG | - | chr4.2:351671-351690 | None:intergenic | 30.0% |
| ! | TCTTGAATTGATCTTTGAGA+GGG | - | chr4.2:347716-347735 | None:intergenic | 30.0% |
| ! | TGTGGCATTTTCTTTTTGTT+TGG | + | chr4.2:351608-351627 | MS.gene93765:intron | 30.0% |
| !! | GATTTGTTCTCTGAAACATT+AGG | + | chr4.2:349867-349886 | MS.gene93765:intron | 30.0% |
| !! | GGTTTTGTAATGATTGAGTT+GGG | + | chr4.2:351328-351347 | MS.gene93765:intron | 30.0% |
| !! | GGTTTTGTAATGGTTGAATT+AGG | + | chr4.2:351022-351041 | MS.gene93765:intron | 30.0% |
| !! | GTTTTGTAATGATTGAGTTG+GGG | + | chr4.2:351329-351348 | MS.gene93765:intron | 30.0% |
| !! | TTGAGGTATGCTTTTTACTA+AGG | + | chr4.2:352841-352860 | MS.gene93765:intron | 30.0% |
| !! | TTTTCTGAAAAGGAACTCAA+CGG | + | chr4.2:353146-353165 | MS.gene93765:CDS | 30.0% |
| !!! | AGTTGCAGTAGTAGTTTTAA+GGG | - | chr4.2:347802-347821 | None:intergenic | 30.0% |
| AAACTTGTGTTAGGCTTCTA+TGG | + | chr4.2:350454-350473 | MS.gene93765:intron | 35.0% | |
| AAAGGAGAAAGAAGAGAGAA+AGG | + | chr4.2:348489-348508 | MS.gene93765:CDS | 35.0% | |
| AAATTCACCAGAATTACTGC+TGG | + | chr4.2:348223-348242 | MS.gene93765:CDS | 35.0% | |
| AACTTGTGTTAGGCTTCTAT+GGG | + | chr4.2:350455-350474 | MS.gene93765:intron | 35.0% | |
| AAGCAAAACTACCATAGTTC+AGG | - | chr4.2:350816-350835 | None:intergenic | 35.0% | |
| AATCACTGAGAACATTAAGC+AGG | - | chr4.2:348783-348802 | None:intergenic | 35.0% | |
| AATTAAAGGACAGGCCATTT+AGG | + | chr4.2:350423-350442 | MS.gene93765:intron | 35.0% | |
| ACAGTTACTCAAGTACTTCA+AGG | + | chr4.2:352009-352028 | MS.gene93765:intron | 35.0% | |
| ACCAGTTTCAGCAAAGAATA+GGG | - | chr4.2:351528-351547 | None:intergenic | 35.0% | |
| ACGTGTAAGAATTTCCATTC+TGG | - | chr4.2:349047-349066 | None:intergenic | 35.0% | |
| AGGGTCTTAGAATTTGGATT+GGG | - | chr4.2:351048-351067 | None:intergenic | 35.0% | |
| AGTGGTAAATCTAGTGATGA+TGG | + | chr4.2:348047-348066 | MS.gene93765:CDS | 35.0% | |
| AGTTGCACAATTACAGGAAA+AGG | + | chr4.2:351811-351830 | MS.gene93765:CDS | 35.0% | |
| ATTCTATGAATCGTGAGAAG+TGG | - | chr4.2:349315-349334 | None:intergenic | 35.0% | |
| ATTGTTATCAGTTGGGAGTT+TGG | - | chr4.2:347751-347770 | None:intergenic | 35.0% | |
| CAAACAGTGAAAACTTGATG+AGG | - | chr4.2:348825-348844 | None:intergenic | 35.0% | |
| CAAGGAAAAGGAGAATATAG+TGG | + | chr4.2:348553-348572 | MS.gene93765:CDS | 35.0% | |
| CAAGTCCCAATTATGTGTTT+GGG | - | chr4.2:352735-352754 | None:intergenic | 35.0% | |
| CAGGAAACAAATTGAAAAGG+TGG | + | chr4.2:350056-350075 | MS.gene93765:intron | 35.0% | |
| CAGTTACTCAAGTACTTCAA+GGG | + | chr4.2:352010-352029 | MS.gene93765:intron | 35.0% | |
| CTTTAATTGTGATGCCAGTT+TGG | - | chr4.2:349488-349507 | None:intergenic | 35.0% | |
| GAATATAGTGGCCAAATTAG+AGG | + | chr4.2:348565-348584 | MS.gene93765:CDS | 35.0% | |
| GAGCCACATTATTCGAATTT+GGG | + | chr4.2:350486-350505 | MS.gene93765:intron | 35.0% | |
| GCTTAATGTTCTCAGTGATT+TGG | + | chr4.2:348783-348802 | MS.gene93765:intron | 35.0% | |
| GCTTGTCACTGATAATTGTA+TGG | + | chr4.2:349189-349208 | MS.gene93765:intron | 35.0% | |
| GTATGAGGGTTAGATGATTT+GGG | - | chr4.2:347831-347850 | None:intergenic | 35.0% | |
| GTTGAGATTATGTTGTGATG+AGG | + | chr4.2:351408-351427 | MS.gene93765:intron | 35.0% | |
| GTTTGAACGAGAAATTCTTG+AGG | + | chr4.2:351763-351782 | MS.gene93765:CDS | 35.0% | |
| GTTTGAGAACTTCTCCTAAT+AGG | + | chr4.2:348840-348859 | MS.gene93765:intron | 35.0% | |
| GTTTGAGAATATCCTTGACT+TGG | + | chr4.2:350757-350776 | MS.gene93765:intron | 35.0% | |
| TAAATGGCCTGTCCTTTAAT+TGG | - | chr4.2:350424-350443 | None:intergenic | 35.0% | |
| TAACACTTCTGATAAACCTG+TGG | + | chr4.2:348169-348188 | MS.gene93765:CDS | 35.0% | |
| TACAATATCAAAGCCTGTTC+TGG | - | chr4.2:350647-350666 | None:intergenic | 35.0% | |
| TACCAGTTTCAGCAAAGAAT+AGG | - | chr4.2:351529-351548 | None:intergenic | 35.0% | |
| TAGGATAGGGTCTTAGAATT+TGG | - | chr4.2:351054-351073 | None:intergenic | 35.0% | |
| TAGGGTCTTAGAATTTGGAT+TGG | - | chr4.2:351049-351068 | None:intergenic | 35.0% | |
| TATCCGTTTCTGATATCAAG+AGG | + | chr4.2:347955-347974 | MS.gene93765:CDS | 35.0% | |
| TATGTTCTCCAATGAGATCA+CGG | - | chr4.2:353271-353290 | None:intergenic | 35.0% | |
| TCAAAAGAGTCTGTTCATGA+AGG | + | chr4.2:349821-349840 | MS.gene93765:CDS | 35.0% | |
| TCATCAAGTGACTTAGAATC+TGG | + | chr4.2:353003-353022 | MS.gene93765:CDS | 35.0% | |
| TCTTACACGTTTAGCTAAAC+TGG | + | chr4.2:349057-349076 | MS.gene93765:CDS | 35.0% | |
| TGAAAACTGTGATAAAAGGG+AGG | + | chr4.2:348327-348346 | MS.gene93765:CDS | 35.0% | |
| TGACTTAGAATCTGGATTGT+GGG | + | chr4.2:353011-353030 | MS.gene93765:CDS | 35.0% | |
| TGCAGAACTCAGACAAAAAA+CGG | + | chr4.2:349796-349815 | MS.gene93765:CDS | 35.0% | |
| TGGAAATTTCGCCTTAATTG+CGG | + | chr4.2:350877-350896 | MS.gene93765:intron | 35.0% | |
| TGTATAGCTTAAAGCACACA+TGG | + | chr4.2:349120-349139 | MS.gene93765:intron | 35.0% | |
| TTAGGATATCCTCAACTCTT+GGG | - | chr4.2:350705-350724 | None:intergenic | 35.0% | |
| TTCCTCTTAAAATCTCAGCT+CGG | - | chr4.2:351585-351604 | None:intergenic | 35.0% | |
| TTCTTTCTCTCCCTCTAATT+TGG | - | chr4.2:348579-348598 | None:intergenic | 35.0% | |
| TTGAGGAATCCTAATCAAAC+TGG | + | chr4.2:351478-351497 | MS.gene93765:CDS | 35.0% | |
| TTTGAAAAGGGGTTCTTCTA+TGG | + | chr4.2:348391-348410 | MS.gene93765:CDS | 35.0% | |
| ! | ATTCTGAAAGTGAACATGAG+AGG | + | chr4.2:348462-348481 | MS.gene93765:CDS | 35.0% |
| ! | GAGTAACTGTGTTTTGCATT+TGG | - | chr4.2:351999-352018 | None:intergenic | 35.0% |
| ! | GTTTGAAGCAAACTTGTGTT+AGG | + | chr4.2:350445-350464 | MS.gene93765:intron | 35.0% |
| ! | TAACTTTTGTAGAGCTCAGA+AGG | + | chr4.2:351452-351471 | MS.gene93765:intron | 35.0% |
| ! | TATGGTTTTCAGAATCAAGC+AGG | + | chr4.2:352674-352693 | MS.gene93765:intron | 35.0% |
| ! | TGGAAGTTCTGATTCAGATA+CGG | + | chr4.2:348421-348440 | MS.gene93765:CDS | 35.0% |
| ! | TTCTGAAAGTGAACATGAGA+GGG | + | chr4.2:348463-348482 | MS.gene93765:CDS | 35.0% |
| !! | AAGTGTTGCTTATAAGTGGT+GGG | + | chr4.2:350979-350998 | MS.gene93765:intron | 35.0% |
| !! | AGATTTTAAGAGGAAGTCTG+TGG | + | chr4.2:351590-351609 | MS.gene93765:intron | 35.0% |
| !! | CAGTTGCAGTAGTAGTTTTA+AGG | - | chr4.2:347803-347822 | None:intergenic | 35.0% |
| !! | CCTGTTCTGGATTTGTTATT+GGG | - | chr4.2:350634-350653 | None:intergenic | 35.0% |
| !! | CGGTTTTGTAATGATTGAGT+TGG | + | chr4.2:351327-351346 | MS.gene93765:intron | 35.0% |
| !! | TAAATCTAGTGATGATGGCA+AGG | + | chr4.2:348052-348071 | MS.gene93765:CDS | 35.0% |
| !! | TTCTAAGTCACTTGATGATG+AGG | - | chr4.2:353001-353020 | None:intergenic | 35.0% |
| !!! | GTTGCAGTAGTAGTTTTAAG+GGG | - | chr4.2:347801-347820 | None:intergenic | 35.0% |
| !!! | TGAATTCTGGCTTTTAGCAT+AGG | - | chr4.2:353060-353079 | None:intergenic | 35.0% |
| AACAATGGAAGCTGTTGAGT+TGG | + | chr4.2:349000-349019 | MS.gene93765:CDS | 40.0% | |
| AACCCTCATACCATTACAGA+CGG | + | chr4.2:347840-347859 | MS.gene93765:CDS | 40.0% | |
| ACAACAAAAGCTAGCTCGTA+TGG | + | chr4.2:350522-350541 | MS.gene93765:intron | 40.0% | |
| ACAGAAAGGCAATACCAGTA+AGG | + | chr4.2:348252-348271 | MS.gene93765:CDS | 40.0% | |
| ACCAACACGTCAAAAAGATC+AGG | - | chr4.2:348917-348936 | None:intergenic | 40.0% | |
| ACCCTATTCTTTGCTGAAAC+TGG | + | chr4.2:351524-351543 | MS.gene93765:intron | 40.0% | |
| ACTACTCTTACCCAGATATG+AGG | - | chr4.2:349726-349745 | None:intergenic | 40.0% | |
| AGAAAGGCAATACCAGTAAG+GGG | + | chr4.2:348254-348273 | MS.gene93765:CDS | 40.0% | |
| AGCTAAACAACAAGCACAAG+AGG | + | chr4.2:348625-348644 | MS.gene93765:CDS | 40.0% | |
| AGGATGTTTAGCGTAGGATA+TGG | + | chr4.2:348725-348744 | MS.gene93765:intron | 40.0% | |
| ATACCATTACAGACGGTGAT+TGG | + | chr4.2:347847-347866 | MS.gene93765:CDS | 40.0% | |
| ATCTGTTCGTGCTCATTAAG+GGG | - | chr4.2:350602-350621 | None:intergenic | 40.0% | |
| ATGAGGATGACACAAGAGTT+TGG | - | chr4.2:349709-349728 | None:intergenic | 40.0% | |
| ATTGATGGAAAATGGACGGA+CGG | - | chr4.2:347524-347543 | None:intergenic | 40.0% | |
| CACATTCAGTTAAGGTCAAG+CGG | - | chr4.2:352072-352091 | None:intergenic | 40.0% | |
| CACCACTTATAAGCAACACT+TGG | - | chr4.2:350980-350999 | None:intergenic | 40.0% | |
| CAGAAAGGCAATACCAGTAA+GGG | + | chr4.2:348253-348272 | MS.gene93765:CDS | 40.0% | |
| CAGACTCTGAATCTAATGTC+TGG | + | chr4.2:352196-352215 | MS.gene93765:intron | 40.0% | |
| CAGAGGTTAGACTCTCTTAA+AGG | + | chr4.2:348014-348033 | MS.gene93765:CDS | 40.0% | |
| CATCTGTTCGTGCTCATTAA+GGG | - | chr4.2:350603-350622 | None:intergenic | 40.0% | |
| CCCAATAACAAATCCAGAAC+AGG | + | chr4.2:350631-350650 | MS.gene93765:intron | 40.0% | |
| CCTAAGAACACACATCAACT+AGG | + | chr4.2:350720-350739 | MS.gene93765:intron | 40.0% | |
| CGCGGTTAGTATCCAATTAA+AGG | + | chr4.2:350409-350428 | MS.gene93765:intron | 40.0% | |
| CTAAAAGCCAGAATTCACTC+TGG | + | chr4.2:353063-353082 | MS.gene93765:CDS | 40.0% | |
| CTTAGGATATCCTCAACTCT+TGG | - | chr4.2:350706-350725 | None:intergenic | 40.0% | |
| CTTCTGTAGATCCTGAACTA+TGG | + | chr4.2:350802-350821 | MS.gene93765:intron | 40.0% | |
| CTTGTGTCATCCTCATATCT+GGG | + | chr4.2:349713-349732 | MS.gene93765:intron | 40.0% | |
| GAACTCAACGGCAAAATTGT+GGG | + | chr4.2:353158-353177 | MS.gene93765:CDS | 40.0% | |
| GCAAGTCCCAATTATGTGTT+TGG | - | chr4.2:352736-352755 | None:intergenic | 40.0% | |
| GCGACATAATATGACCAAAC+TGG | + | chr4.2:349471-349490 | MS.gene93765:intron | 40.0% | |
| GGAGCCACATTATTCGAATT+TGG | + | chr4.2:350485-350504 | MS.gene93765:intron | 40.0% | |
| GGTATGAGGGTTAGATGATT+TGG | - | chr4.2:347832-347851 | None:intergenic | 40.0% | |
| GTGACTTAGAATCTGGATTG+TGG | + | chr4.2:353010-353029 | MS.gene93765:CDS | 40.0% | |
| TACACGTTTAGCTAAACTGG+AGG | + | chr4.2:349060-349079 | MS.gene93765:CDS | 40.0% | |
| TACATTAGACTGCCTATCAG+TGG | - | chr4.2:348099-348118 | None:intergenic | 40.0% | |
| TATGAATCGTGAGAAGTGGA+TGG | - | chr4.2:349311-349330 | None:intergenic | 40.0% | |
| TCCTCTTAAAATCTCAGCTC+GGG | - | chr4.2:351584-351603 | None:intergenic | 40.0% | |
| TCTTGTGTCATCCTCATATC+TGG | + | chr4.2:349712-349731 | MS.gene93765:intron | 40.0% | |
| TGAATCACTCTCATCTGAGA+AGG | + | chr4.2:352800-352819 | MS.gene93765:CDS | 40.0% | |
| TGAATCAGAACTTCCATCAC+TGG | - | chr4.2:348417-348436 | None:intergenic | 40.0% | |
| TGGAAATTCCGCCTTAATTG+CGG | + | chr4.2:351146-351165 | MS.gene93765:intron | 40.0% | |
| TTGAAGTTGAGCTCAAACGT+AGG | + | chr4.2:352432-352451 | MS.gene93765:CDS | 40.0% | |
| TTGAGACCAAGGTAGATCAT+GGG | + | chr4.2:348192-348211 | MS.gene93765:CDS | 40.0% | |
| TTTCAGTCCCAGCAGTATTT+AGG | - | chr4.2:349578-349597 | None:intergenic | 40.0% | |
| TTTCTTGCCAGAGTGAATTC+TGG | - | chr4.2:353073-353092 | None:intergenic | 40.0% | |
| ! | ACATAATTGGGACTTGCTTC+AGG | + | chr4.2:352739-352758 | MS.gene93765:intron | 40.0% |
| ! | ACATGGACTACTTTGACCTT+TGG | + | chr4.2:350564-350583 | MS.gene93765:intron | 40.0% |
| ! | ACCTGATCTTTTTGACGTGT+TGG | + | chr4.2:348913-348932 | MS.gene93765:intron | 40.0% |
| ! | ACCTTGTTTGCCTTCATTTG+TGG | + | chr4.2:353190-353209 | MS.gene93765:CDS | 40.0% |
| ! | ACGGTCTAGATCACTGTTTT+GGG | + | chr4.2:348886-348905 | MS.gene93765:intron | 40.0% |
| ! | AGGAATGCTCGAGTTTTACA+TGG | + | chr4.2:350547-350566 | MS.gene93765:intron | 40.0% |
| ! | CATGGACTACTTTGACCTTT+GGG | + | chr4.2:350565-350584 | MS.gene93765:intron | 40.0% |
| ! | CCTAGTTGATGTGTGTTCTT+AGG | - | chr4.2:350723-350742 | None:intergenic | 40.0% |
| ! | CCTTGTTTGCCTTCATTTGT+GGG | + | chr4.2:353191-353210 | MS.gene93765:CDS | 40.0% |
| ! | CTAACTGCAGATCTAGGATA+GGG | - | chr4.2:351067-351086 | None:intergenic | 40.0% |
| ! | GAGCACTATGATGGAAACAA+TGG | + | chr4.2:348985-349004 | MS.gene93765:CDS | 40.0% |
| ! | GGTGGATTTAGCATCAGTTT+CGG | - | chr4.2:348126-348145 | None:intergenic | 40.0% |
| ! | TAGGCTTCTATGGGTTTTTC+AGG | + | chr4.2:350464-350483 | MS.gene93765:intron | 40.0% |
| ! | TTATACTGGTTATGCTCAGC+AGG | + | chr4.2:348705-348724 | MS.gene93765:intron | 40.0% |
| !! | AGAATATCCTTGACTTGGCA+AGG | + | chr4.2:350762-350781 | MS.gene93765:intron | 40.0% |
| !! | ATTTTCACGATTGACTCAGC+AGG | + | chr4.2:352915-352934 | MS.gene93765:intron | 40.0% |
| !! | CAAGTGTTGCTTATAAGTGG+TGG | + | chr4.2:350978-350997 | MS.gene93765:intron | 40.0% |
| !! | CATTACAAAACCGGCTTGTA+AGG | - | chr4.2:351014-351033 | None:intergenic | 40.0% |
| !! | CTGGTGCAGTTTTTCTGAAA+AGG | + | chr4.2:353136-353155 | MS.gene93765:CDS | 40.0% |
| !! | CTTACAAGCCGGTTTTGTAA+TGG | + | chr4.2:351012-351031 | MS.gene93765:intron | 40.0% |
| !! | GCCTGTTCTGGATTTGTTAT+TGG | - | chr4.2:350635-350654 | None:intergenic | 40.0% |
| !!! | AGCTAGCTTTTGTTGTGAGT+TGG | - | chr4.2:350518-350537 | None:intergenic | 40.0% |
| AAAAGCTAGCTCGTATGGTG+AGG | + | chr4.2:350527-350546 | MS.gene93765:intron | 45.0% | |
| AAAGGCAATACCAGTAAGGG+GGG | + | chr4.2:348256-348275 | MS.gene93765:CDS | 45.0% | |
| ACAGTGGAACCTTGAAGTAG+AGG | + | chr4.2:349261-349280 | MS.gene93765:CDS | 45.0% | |
| ACCAGAATTACTGCTGGAAG+AGG | + | chr4.2:348229-348248 | MS.gene93765:CDS | 45.0% | |
| ACTAACAGATTCCTGTCCTC+TGG | - | chr4.2:348147-348166 | None:intergenic | 45.0% | |
| ACTCAAGTACTTCAAGGGTG+AGG | + | chr4.2:352015-352034 | MS.gene93765:intron | 45.0% | |
| ACTGATGCTAAATCCACCAG+AGG | + | chr4.2:348128-348147 | MS.gene93765:CDS | 45.0% | |
| ACTTTATCAACCCCCCTTAC+TGG | - | chr4.2:348269-348288 | None:intergenic | 45.0% | |
| AGAGTCTAACCTCTGCAAAG+AGG | - | chr4.2:348009-348028 | None:intergenic | 45.0% | |
| AGCTCAACTTCAACTTCCGT+TGG | - | chr4.2:352425-352444 | None:intergenic | 45.0% | |
| AGTCCAATCACCGTCTGTAA+TGG | - | chr4.2:347853-347872 | None:intergenic | 45.0% | |
| AGTTGACTGCCAACATCTAC+AGG | - | chr4.2:348308-348327 | None:intergenic | 45.0% | |
| ATAAGCAACACTTGGCGATG+TGG | - | chr4.2:350972-350991 | None:intergenic | 45.0% | |
| ATTGATGCTCCTCCCAAATC+AGG | + | chr4.2:347681-347700 | MS.gene93765:CDS | 45.0% | |
| CAACGAGAGGCTTCAATTAG+AGG | + | chr4.2:347644-347663 | MS.gene93765:CDS | 45.0% | |
| CACCGTCTGTAATGGTATGA+GGG | - | chr4.2:347845-347864 | None:intergenic | 45.0% | |
| CACTTCGTAAGAACAACGAG+AGG | + | chr4.2:347631-347650 | MS.gene93765:CDS | 45.0% | |
| CAGTCCAAATGCCGCAATTA+AGG | - | chr4.2:350891-350910 | None:intergenic | 45.0% | |
| CCCACAAATGAAGGCAAACA+AGG | - | chr4.2:353194-353213 | None:intergenic | 45.0% | |
| CCTATCCTAGATCTGCAGTT+AGG | + | chr4.2:351065-351084 | MS.gene93765:intron | 45.0% | |
| CGTGAAGCTCCAGTTTGATT+AGG | - | chr4.2:351490-351509 | None:intergenic | 45.0% | |
| GAAAGGCAATACCAGTAAGG+GGG | + | chr4.2:348255-348274 | MS.gene93765:CDS | 45.0% | |
| GAAGGAGATAGAAGAGCCAA+CGG | + | chr4.2:352406-352425 | MS.gene93765:CDS | 45.0% | |
| GATGTCACATTCTAGCCCAT+CGG | + | chr4.2:353227-353246 | MS.gene93765:CDS | 45.0% | |
| GCATCTGTTCGTGCTCATTA+AGG | - | chr4.2:350604-350623 | None:intergenic | 45.0% | |
| GGAACTCAACGGCAAAATTG+TGG | + | chr4.2:353157-353176 | MS.gene93765:CDS | 45.0% | |
| GGCAAATCTCTACGCAATGT+GGG | - | chr4.2:351265-351284 | None:intergenic | 45.0% | |
| GGTTCAGATCGATCAACAAG+CGG | + | chr4.2:347602-347621 | MS.gene93765:intron | 45.0% | |
| GTGAACATGAGAGGGAAGAA+AGG | + | chr4.2:348471-348490 | MS.gene93765:CDS | 45.0% | |
| GTTGACTGCCAACATCTACA+GGG | - | chr4.2:348307-348326 | None:intergenic | 45.0% | |
| GTTGAGACCAAGGTAGATCA+TGG | + | chr4.2:348191-348210 | MS.gene93765:CDS | 45.0% | |
| TAAACCTGTGGTTGAGACCA+AGG | + | chr4.2:348181-348200 | MS.gene93765:CDS | 45.0% | |
| TAAGCAACACTTGGCGATGT+GGG | - | chr4.2:350971-350990 | None:intergenic | 45.0% | |
| TAATGAGCACGAACAGATGC+TGG | + | chr4.2:350604-350623 | MS.gene93765:intron | 45.0% | |
| TCACCGTCTGTAATGGTATG+AGG | - | chr4.2:347846-347865 | None:intergenic | 45.0% | |
| TCCAAAACCTTGCCAAGTCA+AGG | - | chr4.2:350772-350791 | None:intergenic | 45.0% | |
| TCCTCTTCCAGCAGTAATTC+TGG | - | chr4.2:348233-348252 | None:intergenic | 45.0% | |
| TCTGATTCAGATACGGACTC+TGG | + | chr4.2:348428-348447 | MS.gene93765:CDS | 45.0% | |
| TGCCTGATGGAGAATGTTCT+CGG | - | chr4.2:347494-347513 | None:intergenic | 45.0% | |
| TGCCTTAAAATACGAGGTGC+AGG | - | chr4.2:347912-347931 | None:intergenic | 45.0% | |
| TGGCAAATCTCTACGCAATG+TGG | - | chr4.2:351266-351285 | None:intergenic | 45.0% | |
| TTAATACAGCTGCACGTCAC+AGG | + | chr4.2:352349-352368 | MS.gene93765:intron | 45.0% | |
| TTCGCCTTAATTGCGGCATT+TGG | + | chr4.2:350884-350903 | MS.gene93765:intron | 45.0% | |
| ! | AAGCGGTTAAGTCTAGAGTG+AGG | - | chr4.2:352055-352074 | None:intergenic | 45.0% |
| ! | CACGGTCTAGATCACTGTTT+TGG | + | chr4.2:348885-348904 | MS.gene93765:intron | 45.0% |
| ! | CCTAACTGCAGATCTAGGAT+AGG | - | chr4.2:351068-351087 | None:intergenic | 45.0% |
| ! | CTAGAGTGAGGTACCATGAT+AGG | - | chr4.2:352043-352062 | None:intergenic | 45.0% |
| ! | TCCCGAGCTGAGATTTTAAG+AGG | + | chr4.2:351580-351599 | MS.gene93765:intron | 45.0% |
| ! | TGCCTGCACCTCGTATTTTA+AGG | + | chr4.2:347907-347926 | MS.gene93765:CDS | 45.0% |
| !! | AAGGTTGGTATAGGCCCATA+AGG | + | chr4.2:350281-350300 | MS.gene93765:intron | 45.0% |
| !! | AAGTCACTTGATGATGAGGC+AGG | - | chr4.2:352997-353016 | None:intergenic | 45.0% |
| !! | CGCCAAGTGTTGCTTATAAG+TGG | + | chr4.2:350975-350994 | MS.gene93765:intron | 45.0% |
| !!! | TCCTTGACTTGGCAAGGTTT+TGG | + | chr4.2:350768-350787 | MS.gene93765:intron | 45.0% |
| !!! | TTTATTTTTTTTGATTTTAA+CGG | + | chr4.2:347581-347600 | MS.gene93765:intron | 5.0% |
| AACAGATTCCTGTCCTCTGG+TGG | - | chr4.2:348144-348163 | None:intergenic | 50.0% | |
| ACATTCTAGCCCATCGGATG+AGG | + | chr4.2:353233-353252 | MS.gene93765:CDS | 50.0% | |
| ACTCTGGCAAGAAACAGCTG+GGG | + | chr4.2:353079-353098 | MS.gene93765:CDS | 50.0% | |
| ACTGCTGGAAGAGGACAGAA+AGG | + | chr4.2:348238-348257 | MS.gene93765:CDS | 50.0% | |
| AGACTGCCTATCAGTGGAAG+CGG | - | chr4.2:348093-348112 | None:intergenic | 50.0% | |
| AGGGACACCACTACCTGATT+TGG | - | chr4.2:347697-347716 | None:intergenic | 50.0% | |
| ATAAGCCAGCCCAAGAGTTG+AGG | + | chr4.2:350693-350712 | MS.gene93765:intron | 50.0% | |
| ATGGAAAATGGACGGACGGA+CGG | - | chr4.2:347520-347539 | None:intergenic | 50.0% | |
| CACTCTGGCAAGAAACAGCT+GGG | + | chr4.2:353078-353097 | MS.gene93765:CDS | 50.0% | |
| CAGATCTACCCTCATCCGAT+GGG | - | chr4.2:353245-353264 | None:intergenic | 50.0% | |
| CATTCTAGCCCATCGGATGA+GGG | + | chr4.2:353234-353253 | MS.gene93765:CDS | 50.0% | |
| CCAGTTCAACCTCTTTGCAG+AGG | + | chr4.2:347997-348016 | MS.gene93765:CDS | 50.0% | |
| CCTCTGCAAAGAGGTTGAAC+TGG | - | chr4.2:348000-348019 | None:intergenic | 50.0% | |
| CTAGGGGCTAACCGCAATTA+AGG | - | chr4.2:351160-351179 | None:intergenic | 50.0% | |
| CTCAGCAGGATGTTTAGCGT+AGG | + | chr4.2:348719-348738 | MS.gene93765:intron | 50.0% | |
| CTGATGGAGAATGTTCTCGG+CGG | - | chr4.2:347491-347510 | None:intergenic | 50.0% | |
| CTTCGTAAGACTGACCAGAC+TGG | - | chr4.2:352580-352599 | None:intergenic | 50.0% | |
| CTTCTTCCGCTTCCACTGAT+AGG | + | chr4.2:348084-348103 | MS.gene93765:CDS | 50.0% | |
| GACGAGAACATGTCAGTCTC+AGG | + | chr4.2:352955-352974 | MS.gene93765:CDS | 50.0% | |
| GATATCCTCAACTCTTGGGC+TGG | - | chr4.2:350701-350720 | None:intergenic | 50.0% | |
| GCCAACATCTACAGGGAACT+TGG | - | chr4.2:348300-348319 | None:intergenic | 50.0% | |
| GCCAAGTTCCCTGTAGATGT+TGG | + | chr4.2:348296-348315 | MS.gene93765:CDS | 50.0% | |
| GGAAGCCTAACTGCAGATCT+AGG | - | chr4.2:351073-351092 | None:intergenic | 50.0% | |
| GGGACACCACTACCTGATTT+GGG | - | chr4.2:347696-347715 | None:intergenic | 50.0% | |
| GGTTCTTCTATGGCCAGTGA+TGG | + | chr4.2:348401-348420 | MS.gene93765:CDS | 50.0% | |
| GTATCTGTCGCCTTACAAGC+CGG | + | chr4.2:351001-351020 | MS.gene93765:intron | 50.0% | |
| TAGAGCTCAGAAGGAGCTTG+AGG | + | chr4.2:351461-351480 | MS.gene93765:intron | 50.0% | |
| TCACTCTGGCAAGAAACAGC+TGG | + | chr4.2:353077-353096 | MS.gene93765:CDS | 50.0% | |
| TCAGATCGATCAACAAGCGG+CGG | + | chr4.2:347605-347624 | MS.gene93765:intron | 50.0% | |
| TCCAACACCTCCGTTATGCT+GGG | + | chr4.2:350925-350944 | MS.gene93765:intron | 50.0% | |
| TCGTCAACTCTGACACTCTC+TGG | + | chr4.2:349544-349563 | MS.gene93765:intron | 50.0% | |
| TCTACCTTGGTCTCAACCAC+AGG | - | chr4.2:348188-348207 | None:intergenic | 50.0% | |
| TGCTAAATCCACCAGAGGAC+AGG | + | chr4.2:348133-348152 | MS.gene93765:CDS | 50.0% | |
| TTCAGCACCTCCGTTGTGTT+GGG | + | chr4.2:351219-351238 | MS.gene93765:intron | 50.0% | |
| ! | GCAGCTTCAGAGCACTATGA+TGG | + | chr4.2:348976-348995 | MS.gene93765:CDS | 50.0% |
| ! | GGTGCTGAAGGCTACAATGA+CGG | - | chr4.2:351208-351227 | None:intergenic | 50.0% |
| !! | AACTCTTGGGCTGGCTTATG+GGG | - | chr4.2:350692-350711 | None:intergenic | 50.0% |
| !! | ACACCACTACCTGATTTGGG+AGG | - | chr4.2:347693-347712 | None:intergenic | 50.0% |
| !! | ATCTGGTGCCGTGATCTCAT+TGG | + | chr4.2:353260-353279 | MS.gene93765:CDS | 50.0% |
| !! | CAACTCTTGGGCTGGCTTAT+GGG | - | chr4.2:350693-350712 | None:intergenic | 50.0% |
| !! | GAGAGTGTCAGAGTTGACGA+TGG | - | chr4.2:349544-349563 | None:intergenic | 50.0% |
| !! | GGGAGGAGCATCAATACTAC+TGG | - | chr4.2:347676-347695 | None:intergenic | 50.0% |
| !! | GTTCTCGGCGGCTTTAAGTT+TGG | - | chr4.2:347479-347498 | None:intergenic | 50.0% |
| !! | TCAACTCTTGGGCTGGCTTA+TGG | - | chr4.2:350694-350713 | None:intergenic | 50.0% |
| ACATGCCGCAGTTAGGTGCT+AGG | - | chr4.2:351178-351197 | None:intergenic | 55.0% | |
| ATGCCGCAGTTAGGTGCTAG+GGG | - | chr4.2:351176-351195 | None:intergenic | 55.0% | |
| CACGTCACAGGCAAGGAAAC+TGG | + | chr4.2:352361-352380 | MS.gene93765:intron | 55.0% | |
| CATGCCGCAGTTAGGTGCTA+GGG | - | chr4.2:351177-351196 | None:intergenic | 55.0% | |
| CCAGATCTACCCTCATCCGA+TGG | - | chr4.2:353246-353265 | None:intergenic | 55.0% | |
| CCATCGGATGAGGGTAGATC+TGG | + | chr4.2:353243-353262 | MS.gene93765:CDS | 55.0% | |
| CCTGAGGGACAGGGAAAAAC+AGG | - | chr4.2:348952-348971 | None:intergenic | 55.0% | |
| CGCCGAGAACATTCTCCATC+AGG | + | chr4.2:347489-347508 | MS.gene93765:CDS | 55.0% | |
| CTCCAACACCTCCGTTATGC+TGG | + | chr4.2:350924-350943 | MS.gene93765:intron | 55.0% | |
| CTCCGTTATGCTGGGTGTGA+GGG | + | chr4.2:350933-350952 | MS.gene93765:intron | 55.0% | |
| CTCCGTTGTGTTGGGTGTGA+GGG | + | chr4.2:351227-351246 | MS.gene93765:intron | 55.0% | |
| CTTCAGCACCTCCGTTGTGT+TGG | + | chr4.2:351218-351237 | MS.gene93765:intron | 55.0% | |
| GATCCTAGCTGAGAGAGCAG+CGG | + | chr4.2:348511-348530 | MS.gene93765:CDS | 55.0% | |
| GCTCCTCCCAAATCAGGTAG+TGG | + | chr4.2:347687-347706 | MS.gene93765:CDS | 55.0% | |
| GGCACAGCGTTAGAAGCAGA+AGG | - | chr4.2:347891-347910 | None:intergenic | 55.0% | |
| GGGGCTAACCGCAATTAAGG+CGG | - | chr4.2:351157-351176 | None:intergenic | 55.0% | |
| GGGGTGTGTTGAGATCCCAA+AGG | - | chr4.2:350583-350602 | None:intergenic | 55.0% | |
| GTAAGACTGACCAGACTGGC+TGG | - | chr4.2:352576-352595 | None:intergenic | 55.0% | |
| GTCCACACTTCAGGCCCATA+GGG | + | chr4.2:351099-351118 | MS.gene93765:intron | 55.0% | |
| GTTCCACTGTACAGCTGCGA+GGG | - | chr4.2:349251-349270 | None:intergenic | 55.0% | |
| TAGCCCCTAGCACCTAACTG+CGG | + | chr4.2:351170-351189 | MS.gene93765:intron | 55.0% | |
| TCCGTTATGCTGGGTGTGAG+GGG | + | chr4.2:350934-350953 | MS.gene93765:intron | 55.0% | |
| TCCGTTGTGTTGGGTGTGAG+GGG | + | chr4.2:351228-351247 | MS.gene93765:intron | 55.0% | |
| TGGGTGCCCATGATCTACCT+TGG | - | chr4.2:348201-348220 | None:intergenic | 55.0% | |
| TGTCCACACTTCAGGCCCAT+AGG | + | chr4.2:351098-351117 | MS.gene93765:intron | 55.0% | |
| ! | ACCCAGCATAACGGAGGTGT+TGG | - | chr4.2:350929-350948 | None:intergenic | 55.0% |
| ! | CAAGGGTGAGGCACCTATCA+TGG | + | chr4.2:352027-352046 | MS.gene93765:intron | 55.0% |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | - | chr4.2:350914-350933 | None:intergenic | 55.0% |
| ! | TCTGAAGCTGCGAAGCCTGA+GGG | - | chr4.2:348967-348986 | None:intergenic | 55.0% |
| !! | CAACACAACGGAGGTGCTGA+AGG | - | chr4.2:351220-351239 | None:intergenic | 55.0% |
| !! | CAGCATAACGGAGGTGTTGG+AGG | - | chr4.2:350926-350945 | None:intergenic | 55.0% |
| !! | CCTGTTTTTCCCTGTCCCTC+AGG | + | chr4.2:348949-348968 | MS.gene93765:intron | 55.0% |
| ACAGCTGCACGTCACAGGCA+AGG | + | chr4.2:352354-352373 | MS.gene93765:intron | 60.0% | |
| CCAGCTCACATGCCGCAGTT+AGG | - | chr4.2:351185-351204 | None:intergenic | 60.0% | |
| CCCCCTCACACCCAACACAA+CGG | - | chr4.2:351232-351251 | None:intergenic | 60.0% | |
| CCCCCTCACACCCAGCATAA+CGG | - | chr4.2:350938-350957 | None:intergenic | 60.0% | |
| CCGTTATGCTGGGTGTGAGG+GGG | + | chr4.2:350935-350954 | MS.gene93765:intron | 60.0% | |
| CCGTTGTGTTGGGTGTGAGG+GGG | + | chr4.2:351229-351248 | MS.gene93765:intron | 60.0% | |
| CCTAACTGCGGCATGTGAGC+TGG | + | chr4.2:351182-351201 | MS.gene93765:intron | 60.0% | |
| CCTCACACCCAACACAACGG+AGG | - | chr4.2:351229-351248 | None:intergenic | 60.0% | |
| CCTCACACCCAGCATAACGG+AGG | - | chr4.2:350935-350954 | None:intergenic | 60.0% | |
| CCTCCGTTATGCTGGGTGTG+AGG | + | chr4.2:350932-350951 | MS.gene93765:intron | 60.0% | |
| CCTCCGTTGTGTTGGGTGTG+AGG | + | chr4.2:351226-351245 | MS.gene93765:intron | 60.0% | |
| GACCCTATGGGCCTGAAGTG+TGG | - | chr4.2:351104-351123 | None:intergenic | 60.0% | |
| GATCCCTCGCAGCTGTACAG+TGG | + | chr4.2:349245-349264 | MS.gene93765:CDS | 60.0% | |
| GCCTGAAGTGTGGACAACGC+GGG | - | chr4.2:351094-351113 | None:intergenic | 60.0% | |
| GGCCTGAAGTGTGGACAACG+CGG | - | chr4.2:351095-351114 | None:intergenic | 60.0% | |
| GGTTCCACTGTACAGCTGCG+AGG | - | chr4.2:349252-349271 | None:intergenic | 60.0% | |
| TCAGGCTTGACCAGCCAGTC+TGG | + | chr4.2:352563-352582 | MS.gene93765:intron | 60.0% | |
| TCCCGCGTTGTCCACACTTC+AGG | + | chr4.2:351090-351109 | MS.gene93765:intron | 60.0% | |
| TGACTCAGCAGGCAGTGTCG+AGG | + | chr4.2:352926-352945 | MS.gene93765:intron | 60.0% | |
| TGTGTTGGGTGTGAGGGGGT+GGG | + | chr4.2:351233-351252 | MS.gene93765:intron | 60.0% | |
| TTGCCGCTGCTCTCTCAGCT+AGG | - | chr4.2:348517-348536 | None:intergenic | 60.0% | |
| TTGTGTTGGGTGTGAGGGGG+TGG | + | chr4.2:351232-351251 | MS.gene93765:intron | 60.0% | |
| !! | CTCTGAAGCTGCGAAGCCTG+AGG | - | chr4.2:348968-348987 | None:intergenic | 60.0% |
| AGCTGCGAAGCCTGAGGGAC+AGG | - | chr4.2:348962-348981 | None:intergenic | 65.0% | |
| GCTGCGAAGCCTGAGGGACA+GGG | - | chr4.2:348961-348980 | None:intergenic | 65.0% | |
| ! | GCAGGCAGTGTCGAGGTTGC+TGG | + | chr4.2:352933-352952 | MS.gene93765:intron | 65.0% |
| ! | GGACGGACGGACTTGCCTGA+TGG | - | chr4.2:347507-347526 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 347457 | 353308 | 347457 | ID=MS.gene93765 |
| chr4.2 | mRNA | 347457 | 353308 | 347457 | ID=MS.gene93765.t1;Parent=MS.gene93765 |
| chr4.2 | exon | 347457 | 347522 | 347457 | ID=MS.gene93765.t1.exon1;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 347457 | 347522 | 347457 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| chr4.2 | exon | 347609 | 348646 | 347609 | ID=MS.gene93765.t1.exon2;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 347609 | 348646 | 347609 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| chr4.2 | exon | 348971 | 349081 | 348971 | ID=MS.gene93765.t1.exon3;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 348971 | 349081 | 348971 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| chr4.2 | exon | 349223 | 349282 | 349223 | ID=MS.gene93765.t1.exon4;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 349223 | 349282 | 349223 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| chr4.2 | exon | 349785 | 349842 | 349785 | ID=MS.gene93765.t1.exon5;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 349785 | 349842 | 349785 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| chr4.2 | exon | 351464 | 351516 | 351464 | ID=MS.gene93765.t1.exon6;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 351464 | 351516 | 351464 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| chr4.2 | exon | 351743 | 351832 | 351743 | ID=MS.gene93765.t1.exon7;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 351743 | 351832 | 351743 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| chr4.2 | exon | 352371 | 352496 | 352371 | ID=MS.gene93765.t1.exon8;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 352371 | 352496 | 352371 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| chr4.2 | exon | 352798 | 352845 | 352798 | ID=MS.gene93765.t1.exon9;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 352798 | 352845 | 352798 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| chr4.2 | exon | 352937 | 353308 | 352937 | ID=MS.gene93765.t1.exon10;Parent=MS.gene93765.t1 |
| chr4.2 | CDS | 352937 | 353308 | 352937 | ID=cds.MS.gene93765.t1;Parent=MS.gene93765.t1 |
| Gene Sequence |
| Protein sequence |
