Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95903.t1 | RHN78267.1 | 96.7 | 369 | 12 | 0 | 1 | 369 | 16 | 384 | 7.00E-205 | 723 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95903.t1 | P93324 | 51.9 | 372 | 164 | 6 | 1 | 369 | 13 | 372 | 2.8e-101 | 370.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95903.t1 | A0A396JUB6 | 96.7 | 369 | 12 | 0 | 1 | 369 | 16 | 384 | 5.0e-205 | 723.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050381 | MS.gene95903 | 0.873355 | 1.57E-67 | -1.69E-46 |
| MS.gene050883 | MS.gene95903 | 0.844719 | 6.35E-59 | -1.69E-46 |
| MS.gene051044 | MS.gene95903 | 0.817816 | 2.71E-52 | -1.69E-46 |
| MS.gene051127 | MS.gene95903 | 0.828816 | 7.29E-55 | -1.69E-46 |
| MS.gene053069 | MS.gene95903 | 0.833477 | 5.22E-56 | -1.69E-46 |
| MS.gene053420 | MS.gene95903 | 0.824404 | 8.22E-54 | -1.69E-46 |
| MS.gene054056 | MS.gene95903 | 0.831367 | 1.74E-55 | -1.69E-46 |
| MS.gene054706 | MS.gene95903 | 0.814115 | 1.82E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene95903 | 0.83471 | 2.56E-56 | -1.69E-46 |
| MS.gene055124 | MS.gene95903 | 0.844617 | 6.77E-59 | -1.69E-46 |
| MS.gene055154 | MS.gene95903 | 0.803743 | 3.01E-49 | -1.69E-46 |
| MS.gene055959 | MS.gene95903 | 0.811345 | 7.33E-51 | -1.69E-46 |
| MS.gene056310 | MS.gene95903 | 0.835869 | 1.31E-56 | -1.69E-46 |
| MS.gene056311 | MS.gene95903 | 0.822727 | 2.03E-53 | -1.69E-46 |
| MS.gene056313 | MS.gene95903 | 0.841832 | 3.74E-58 | -1.69E-46 |
| MS.gene057473 | MS.gene95903 | 0.816147 | 6.42E-52 | -1.69E-46 |
| MS.gene058093 | MS.gene95903 | 0.843127 | 1.70E-58 | -1.69E-46 |
| MS.gene058099 | MS.gene95903 | 0.87329 | 1.65E-67 | -1.69E-46 |
| MS.gene058108 | MS.gene95903 | 0.811748 | 5.99E-51 | -1.69E-46 |
| MS.gene058109 | MS.gene95903 | 0.843989 | 9.98E-59 | -1.69E-46 |
| MS.gene058111 | MS.gene95903 | 0.800675 | 1.29E-48 | -1.69E-46 |
| MS.gene058171 | MS.gene95903 | 0.846548 | 2.03E-59 | -1.69E-46 |
| MS.gene058173 | MS.gene95903 | 0.836802 | 7.56E-57 | -1.69E-46 |
| MS.gene058175 | MS.gene95903 | 0.846841 | 1.69E-59 | -1.69E-46 |
| MS.gene058268 | MS.gene95903 | 0.833758 | 4.44E-56 | -1.69E-46 |
| MS.gene058269 | MS.gene95903 | 0.817414 | 3.34E-52 | -1.69E-46 |
| MS.gene059037 | MS.gene95903 | 0.813514 | 2.46E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene95903 | 0.852327 | 4.96E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene95903 | -0.802601 | 5.19E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95903.t1 | MTR_1g036510 | 96.477 | 369 | 13 | 0 | 1 | 369 | 16 | 384 | 0.0 | 739 |
| MS.gene95903.t1 | MTR_1g036490 | 82.432 | 370 | 64 | 1 | 1 | 369 | 1 | 370 | 0.0 | 636 |
| MS.gene95903.t1 | MTR_1g036460 | 80.000 | 370 | 73 | 1 | 1 | 369 | 1 | 370 | 0.0 | 622 |
| MS.gene95903.t1 | MTR_1g050220 | 82.175 | 331 | 11 | 2 | 21 | 351 | 5 | 287 | 0.0 | 539 |
| MS.gene95903.t1 | MTR_1g036510 | 95.941 | 271 | 11 | 0 | 1 | 271 | 16 | 286 | 0.0 | 511 |
| MS.gene95903.t1 | MTR_1g036510 | 96.386 | 249 | 9 | 0 | 1 | 249 | 16 | 264 | 3.02e-177 | 493 |
| MS.gene95903.t1 | MTR_7g011900 | 53.591 | 362 | 159 | 6 | 10 | 369 | 16 | 370 | 6.82e-132 | 382 |
| MS.gene95903.t1 | MTR_1g096310 | 51.344 | 372 | 166 | 6 | 1 | 369 | 13 | 372 | 1.48e-131 | 381 |
| MS.gene95903.t1 | MTR_7g012040 | 52.222 | 360 | 164 | 5 | 11 | 369 | 16 | 368 | 1.91e-129 | 375 |
| MS.gene95903.t1 | MTR_2g055940 | 53.143 | 350 | 156 | 5 | 22 | 369 | 20 | 363 | 1.51e-127 | 370 |
| MS.gene95903.t1 | MTR_7g012070 | 53.297 | 364 | 162 | 6 | 10 | 369 | 16 | 375 | 2.57e-127 | 370 |
| MS.gene95903.t1 | MTR_3g021440 | 52.646 | 359 | 162 | 6 | 13 | 369 | 18 | 370 | 3.96e-127 | 370 |
| MS.gene95903.t1 | MTR_7g012090 | 53.760 | 359 | 159 | 6 | 16 | 369 | 19 | 375 | 6.71e-127 | 369 |
| MS.gene95903.t1 | MTR_7g012020 | 50.970 | 361 | 168 | 6 | 11 | 369 | 16 | 369 | 6.37e-126 | 367 |
| MS.gene95903.t1 | MTR_7g011990 | 50.829 | 362 | 164 | 6 | 11 | 369 | 17 | 367 | 1.37e-124 | 363 |
| MS.gene95903.t1 | MTR_3g021430 | 50.139 | 359 | 169 | 7 | 14 | 369 | 6 | 357 | 8.93e-117 | 343 |
| MS.gene95903.t1 | MTR_3g092900 | 42.818 | 369 | 200 | 6 | 4 | 369 | 3 | 363 | 3.71e-109 | 324 |
| MS.gene95903.t1 | MTR_7g118300 | 45.304 | 362 | 183 | 8 | 13 | 369 | 24 | 375 | 3.36e-97 | 294 |
| MS.gene95903.t1 | MTR_5g098170 | 40.771 | 363 | 201 | 8 | 13 | 369 | 9 | 363 | 3.38e-93 | 283 |
| MS.gene95903.t1 | MTR_7g012020 | 52.399 | 271 | 120 | 6 | 11 | 278 | 16 | 280 | 4.06e-90 | 273 |
| MS.gene95903.t1 | MTR_8g068690 | 41.011 | 356 | 199 | 6 | 18 | 369 | 28 | 376 | 7.24e-90 | 275 |
| MS.gene95903.t1 | MTR_7g118320 | 41.292 | 356 | 198 | 6 | 18 | 369 | 14 | 362 | 2.47e-89 | 273 |
| MS.gene95903.t1 | MTR_0591s0010 | 41.573 | 356 | 197 | 6 | 18 | 369 | 29 | 377 | 4.26e-89 | 273 |
| MS.gene95903.t1 | MTR_8g068870 | 39.335 | 361 | 208 | 6 | 13 | 369 | 10 | 363 | 1.05e-87 | 269 |
| MS.gene95903.t1 | MTR_8g068750 | 39.607 | 356 | 204 | 6 | 18 | 369 | 29 | 377 | 3.83e-87 | 268 |
| MS.gene95903.t1 | MTR_7g012020 | 51.440 | 243 | 110 | 5 | 11 | 251 | 16 | 252 | 8.23e-78 | 240 |
| MS.gene95903.t1 | MTR_8g024160 | 37.265 | 373 | 178 | 7 | 2 | 369 | 7 | 328 | 2.07e-77 | 241 |
| MS.gene95903.t1 | MTR_6g078850 | 39.496 | 357 | 203 | 7 | 18 | 368 | 33 | 382 | 6.13e-77 | 246 |
| MS.gene95903.t1 | MTR_8g068570 | 38.629 | 321 | 163 | 5 | 18 | 335 | 29 | 318 | 2.31e-71 | 226 |
| MS.gene95903.t1 | MTR_8g068730 | 36.236 | 356 | 184 | 7 | 18 | 369 | 29 | 345 | 3.04e-68 | 218 |
| MS.gene95903.t1 | MTR_3g096050 | 35.833 | 360 | 217 | 7 | 14 | 369 | 9 | 358 | 9.78e-63 | 204 |
| MS.gene95903.t1 | MTR_8g068690 | 40.625 | 256 | 144 | 4 | 18 | 270 | 28 | 278 | 2.05e-62 | 201 |
| MS.gene95903.t1 | MTR_2g072790 | 35.813 | 363 | 212 | 8 | 14 | 369 | 6 | 354 | 3.80e-62 | 203 |
| MS.gene95903.t1 | MTR_0017s0100 | 34.320 | 338 | 202 | 11 | 37 | 368 | 44 | 367 | 6.87e-55 | 184 |
| MS.gene95903.t1 | MTR_3g096070 | 34.540 | 359 | 200 | 9 | 14 | 369 | 9 | 335 | 1.48e-53 | 180 |
| MS.gene95903.t1 | MTR_8g068600 | 39.044 | 251 | 137 | 5 | 43 | 282 | 28 | 273 | 1.37e-52 | 176 |
| MS.gene95903.t1 | MTR_0079s0070 | 33.628 | 339 | 203 | 12 | 37 | 368 | 10 | 333 | 4.99e-52 | 176 |
| MS.gene95903.t1 | MTR_4g038440 | 33.628 | 339 | 203 | 12 | 37 | 368 | 44 | 367 | 1.01e-51 | 176 |
| MS.gene95903.t1 | MTR_8g068740 | 34.495 | 287 | 147 | 6 | 1 | 284 | 13 | 261 | 1.02e-47 | 163 |
| MS.gene95903.t1 | MTR_3g083620 | 38.571 | 210 | 124 | 4 | 143 | 348 | 134 | 342 | 1.06e-44 | 157 |
| MS.gene95903.t1 | MTR_5g074600 | 28.219 | 365 | 240 | 10 | 14 | 368 | 6 | 358 | 3.97e-41 | 148 |
| MS.gene95903.t1 | MTR_7g024500 | 30.769 | 260 | 162 | 3 | 108 | 353 | 81 | 336 | 4.37e-41 | 148 |
| MS.gene95903.t1 | MTR_3g096050 | 36.398 | 261 | 154 | 7 | 14 | 271 | 9 | 260 | 7.96e-41 | 145 |
| MS.gene95903.t1 | MTR_7g024520 | 31.538 | 260 | 160 | 3 | 108 | 353 | 81 | 336 | 6.17e-40 | 145 |
| MS.gene95903.t1 | MTR_7g014570 | 29.752 | 363 | 214 | 11 | 22 | 368 | 14 | 351 | 2.91e-39 | 143 |
| MS.gene95903.t1 | MTR_4g088200 | 30.994 | 342 | 212 | 9 | 37 | 368 | 33 | 360 | 5.22e-39 | 142 |
| MS.gene95903.t1 | MTR_4g079160 | 30.792 | 341 | 217 | 6 | 22 | 354 | 13 | 342 | 7.27e-39 | 142 |
| MS.gene95903.t1 | MTR_5g074680 | 29.480 | 346 | 226 | 9 | 29 | 368 | 26 | 359 | 1.57e-38 | 141 |
| MS.gene95903.t1 | MTR_4g088345 | 29.787 | 329 | 206 | 7 | 34 | 353 | 30 | 342 | 2.28e-38 | 140 |
| MS.gene95903.t1 | MTR_4g088340 | 37.037 | 189 | 116 | 1 | 168 | 353 | 131 | 319 | 3.75e-38 | 139 |
| MS.gene95903.t1 | MTR_5g074580 | 29.189 | 370 | 236 | 10 | 13 | 368 | 2 | 359 | 3.94e-38 | 140 |
| MS.gene95903.t1 | MTR_4g033015 | 30.548 | 347 | 225 | 8 | 29 | 368 | 25 | 362 | 4.32e-38 | 140 |
| MS.gene95903.t1 | MTR_1g076940 | 29.201 | 363 | 231 | 10 | 1 | 353 | 1 | 347 | 4.46e-38 | 140 |
| MS.gene95903.t1 | MTR_5g074540 | 33.878 | 245 | 150 | 5 | 129 | 368 | 103 | 340 | 1.08e-36 | 136 |
| MS.gene95903.t1 | MTR_4g033200 | 29.971 | 347 | 227 | 8 | 29 | 368 | 25 | 362 | 1.17e-36 | 136 |
| MS.gene95903.t1 | MTR_4g033150 | 29.204 | 339 | 224 | 8 | 37 | 368 | 33 | 362 | 1.88e-36 | 135 |
| MS.gene95903.t1 | MTR_7g014510 | 27.987 | 318 | 188 | 6 | 69 | 368 | 62 | 356 | 1.46e-35 | 133 |
| MS.gene95903.t1 | MTR_5g074610 | 39.645 | 169 | 97 | 2 | 203 | 368 | 159 | 325 | 6.20e-35 | 130 |
| MS.gene95903.t1 | MTR_8g068620 | 51.376 | 109 | 53 | 0 | 162 | 270 | 2 | 110 | 2.76e-34 | 123 |
| MS.gene95903.t1 | MTR_4g088190 | 30.435 | 345 | 213 | 8 | 37 | 368 | 33 | 363 | 8.08e-31 | 120 |
| MS.gene95903.t1 | MTR_4g033170 | 29.191 | 346 | 225 | 8 | 29 | 368 | 25 | 356 | 2.18e-29 | 116 |
| MS.gene95903.t1 | MTR_6g060290 | 39.655 | 174 | 83 | 5 | 11 | 182 | 17 | 170 | 8.33e-29 | 110 |
| MS.gene95903.t1 | MTR_4g038440 | 31.513 | 238 | 150 | 6 | 37 | 271 | 44 | 271 | 4.40e-28 | 111 |
| MS.gene95903.t1 | MTR_1g037040 | 75.385 | 65 | 16 | 0 | 298 | 362 | 20 | 84 | 4.41e-27 | 103 |
| MS.gene95903.t1 | MTR_4g033085 | 29.191 | 346 | 225 | 8 | 29 | 368 | 25 | 356 | 1.28e-25 | 106 |
| MS.gene95903.t1 | MTR_1g037140 | 69.231 | 65 | 20 | 0 | 292 | 356 | 48 | 112 | 2.43e-23 | 94.4 |
| MS.gene95903.t1 | MTR_8g068760 | 41.584 | 101 | 56 | 2 | 270 | 369 | 135 | 233 | 3.12e-19 | 85.9 |
| MS.gene95903.t1 | MTR_8g068760 | 36.154 | 130 | 75 | 4 | 20 | 145 | 18 | 143 | 1.92e-17 | 80.9 |
| MS.gene95903.t1 | MTR_8g068590 | 33.333 | 126 | 79 | 2 | 13 | 136 | 3 | 125 | 2.77e-17 | 78.2 |
| MS.gene95903.t1 | MTR_1g076930 | 25.498 | 251 | 165 | 9 | 29 | 271 | 2 | 238 | 5.22e-16 | 77.0 |
| MS.gene95903.t1 | MTR_6g060280 | 58.333 | 60 | 19 | 2 | 222 | 276 | 1 | 59 | 8.20e-15 | 69.3 |
| MS.gene95903.t1 | MTR_8g068580 | 45.161 | 93 | 48 | 2 | 278 | 369 | 43 | 133 | 4.66e-14 | 68.9 |
| MS.gene95903.t1 | MTR_0794s0020 | 25.446 | 224 | 156 | 6 | 37 | 256 | 33 | 249 | 6.24e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95903.t1 | AT5G54160 | 45.070 | 355 | 184 | 5 | 4 | 355 | 3 | 349 | 2.79e-107 | 319 |
| MS.gene95903.t1 | AT1G77520 | 40.323 | 372 | 203 | 10 | 10 | 369 | 17 | 381 | 3.56e-93 | 284 |
| MS.gene95903.t1 | AT1G51990 | 39.222 | 334 | 197 | 5 | 18 | 348 | 13 | 343 | 5.89e-82 | 254 |
| MS.gene95903.t1 | AT1G51990 | 38.623 | 334 | 199 | 5 | 18 | 348 | 13 | 343 | 9.83e-80 | 249 |
| MS.gene95903.t1 | AT1G77530 | 40.323 | 372 | 203 | 9 | 10 | 369 | 17 | 381 | 9.61e-77 | 241 |
| MS.gene95903.t1 | AT1G33030 | 38.636 | 352 | 199 | 9 | 24 | 369 | 10 | 350 | 1.28e-76 | 240 |
| MS.gene95903.t1 | AT1G63140 | 40.164 | 366 | 194 | 10 | 18 | 369 | 47 | 401 | 1.13e-74 | 237 |
| MS.gene95903.t1 | AT1G63140 | 40.164 | 366 | 194 | 10 | 18 | 369 | 27 | 381 | 1.51e-74 | 236 |
| MS.gene95903.t1 | AT1G21130 | 40.437 | 366 | 194 | 13 | 1 | 355 | 9 | 361 | 3.13e-68 | 219 |
| MS.gene95903.t1 | AT1G21100 | 40.164 | 366 | 195 | 13 | 1 | 355 | 9 | 361 | 4.71e-67 | 216 |
| MS.gene95903.t1 | AT1G21110 | 39.510 | 367 | 196 | 13 | 1 | 355 | 9 | 361 | 2.98e-66 | 214 |
| MS.gene95903.t1 | AT5G53810 | 38.040 | 347 | 197 | 10 | 34 | 369 | 39 | 378 | 1.85e-65 | 212 |
| MS.gene95903.t1 | AT1G21120 | 39.237 | 367 | 197 | 13 | 1 | 355 | 9 | 361 | 1.47e-64 | 210 |
| MS.gene95903.t1 | AT1G76790 | 39.769 | 347 | 188 | 10 | 22 | 356 | 17 | 354 | 8.55e-64 | 207 |
| MS.gene95903.t1 | AT1G21120 | 38.904 | 365 | 201 | 12 | 1 | 355 | 57 | 409 | 1.09e-63 | 209 |
| MS.gene95903.t1 | AT3G53140 | 36.023 | 347 | 204 | 9 | 15 | 352 | 7 | 344 | 6.54e-60 | 197 |
| MS.gene95903.t1 | AT5G37170 | 37.421 | 318 | 157 | 10 | 61 | 369 | 50 | 334 | 2.28e-55 | 185 |
| MS.gene95903.t1 | AT1G62900 | 44.390 | 205 | 110 | 3 | 167 | 369 | 3 | 205 | 1.16e-54 | 179 |
| MS.gene95903.t1 | AT5G37170 | 42.791 | 215 | 116 | 5 | 158 | 369 | 24 | 234 | 5.96e-52 | 173 |
| MS.gene95903.t1 | AT1G33030 | 39.216 | 255 | 141 | 7 | 24 | 273 | 10 | 255 | 1.81e-51 | 173 |
| MS.gene95903.t1 | AT1G33030 | 39.130 | 253 | 140 | 7 | 24 | 271 | 10 | 253 | 2.45e-50 | 169 |
| MS.gene95903.t1 | AT5G37170 | 45.213 | 188 | 98 | 4 | 185 | 369 | 1 | 186 | 1.19e-48 | 162 |
| MS.gene95903.t1 | AT1G63140 | 40.226 | 266 | 138 | 7 | 18 | 271 | 47 | 303 | 6.20e-48 | 164 |
| MS.gene95903.t1 | AT4G35150 | 36.946 | 203 | 118 | 4 | 161 | 353 | 108 | 310 | 1.13e-42 | 151 |
| MS.gene95903.t1 | AT1G21130 | 40.000 | 280 | 146 | 11 | 1 | 271 | 9 | 275 | 1.31e-41 | 148 |
| MS.gene95903.t1 | AT4G35160 | 32.700 | 263 | 157 | 8 | 123 | 369 | 123 | 381 | 2.25e-38 | 141 |
| MS.gene95903.t1 | AT1G77530 | 38.800 | 250 | 138 | 7 | 10 | 249 | 17 | 261 | 2.92e-37 | 135 |
| MS.gene95903.t1 | AT1G63140 | 38.247 | 251 | 134 | 7 | 18 | 256 | 47 | 288 | 8.78e-37 | 135 |
Find 63 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGCAAGCAATATGAAATT+TGG | 0.211032 | 1.3:+20667230 | None:intergenic |
| ATCCATGAACTTTATGAAAA+TGG | 0.232199 | 1.3:+20668863 | None:intergenic |
| ATCACCGGCTTATAAATATT+TGG | 0.239790 | 1.3:-20668842 | MS.gene95903:CDS |
| ACAATCACCTTTCCATGTTT+TGG | 0.241056 | 1.3:+20667399 | None:intergenic |
| TCTGAATATCCTTCAATAAA+AGG | 0.244422 | 1.3:-20668661 | MS.gene95903:CDS |
| TCAAGCCTCTCAGCCAATTC+AGG | 0.269845 | 1.3:+20669440 | None:intergenic |
| ACATGGAAAGGTGATTGTTT+TGG | 0.270336 | 1.3:-20667394 | MS.gene95903:CDS |
| TGAAAATGGTCATTGTTGTT+AGG | 0.282307 | 1.3:+20668877 | None:intergenic |
| GGATAAAGATGGAGGCTCTT+TGG | 0.282636 | 1.3:-20669300 | MS.gene95903:CDS |
| GCCAATTCAGGGTGTTGATT+TGG | 0.300679 | 1.3:+20669452 | None:intergenic |
| TTTAGCTTGTATGTCACAAT+TGG | 0.318038 | 1.3:-20667470 | MS.gene95903:intron |
| TTCTTTCTTACCATCTTCAT+TGG | 0.332460 | 1.3:+20669364 | None:intergenic |
| GATAAAGATGGAGGCTCTTT+GGG | 0.338071 | 1.3:-20669299 | MS.gene95903:CDS |
| AGGATTCTTACACTATATAA+AGG | 0.342110 | 1.3:-20668751 | MS.gene95903:CDS |
| AGGGGTAAACTGAGTTTGTT+TGG | 0.350859 | 1.3:+20669649 | None:intergenic |
| GAAAATGGTCATTGTTGTTA+GGG | 0.378056 | 1.3:+20668878 | None:intergenic |
| ATAGCAGCATTTAGTATTGC+AGG | 0.379466 | 1.3:+20669563 | None:intergenic |
| TCCAAATCAACACCCTGAAT+TGG | 0.385842 | 1.3:-20669453 | MS.gene95903:CDS |
| GCAAGTGAGAAGAGAGTAAC+TGG | 0.394161 | 1.3:+20669397 | None:intergenic |
| AACAAAGCAATGGCTCAATC+TGG | 0.399952 | 1.3:-20668790 | MS.gene95903:CDS |
| TTGCTTGGGTTTGGGACCTC+AGG | 0.403803 | 1.3:+20667360 | None:intergenic |
| TACACTATATAAAGGATTTG+AGG | 0.415995 | 1.3:-20668743 | MS.gene95903:CDS |
| CTCAGCTATGTCTGGAGTAA+TGG | 0.435264 | 1.3:-20667202 | MS.gene95903:CDS |
| ATCGTGGATATCATGATGTT+TGG | 0.437952 | 1.3:-20669256 | MS.gene95903:intron |
| TTCTCCAAATATTTATAAGC+CGG | 0.439608 | 1.3:+20668838 | None:intergenic |
| GTTTATGCTCTCTCATCAAT+TGG | 0.442550 | 1.3:-20669338 | MS.gene95903:CDS |
| CAAAACTTATGCATGAGCTC+TGG | 0.450322 | 1.3:-20667258 | MS.gene95903:CDS |
| TACTTTGCATTGGATAAAGA+TGG | 0.457504 | 1.3:-20669311 | MS.gene95903:CDS |
| CACAAAGCTTTGCCAAAACA+TGG | 0.460437 | 1.3:-20667411 | MS.gene95903:CDS |
| ACACTATATAAAGGATTTGA+GGG | 0.464404 | 1.3:-20668742 | MS.gene95903:CDS |
| CTGGTCCATTAGAAATGAAA+AGG | 0.467725 | 1.3:-20668771 | MS.gene95903:CDS |
| AATTGGTCAATACTTTGCAT+TGG | 0.471367 | 1.3:-20669321 | MS.gene95903:CDS |
| CTCACTAACCTTTAGTAAGA+TGG | 0.473210 | 1.3:+20668304 | None:intergenic |
| GTTGATGTAGGTGGTGGAGT+AGG | 0.476718 | 1.3:-20668706 | MS.gene95903:CDS |
| TTGATGTAGGTGGTGGAGTA+GGG | 0.487539 | 1.3:-20668705 | MS.gene95903:CDS |
| ACCATCTTCATTGGTACGAA+TGG | 0.502294 | 1.3:+20669373 | None:intergenic |
| TGGTGCATCTTGAACCACTT+GGG | 0.504233 | 1.3:+20668621 | None:intergenic |
| CAAGATGCACCAACTCATCC+AGG | 0.511168 | 1.3:-20668610 | MS.gene95903:intron |
| AGTGATATCTCAGCTATGTC+TGG | 0.511397 | 1.3:-20667210 | MS.gene95903:CDS |
| AAACTGAGTTTGTTTGGTGT+TGG | 0.514201 | 1.3:+20669655 | None:intergenic |
| TTAGCTTGTATGTCACAATT+GGG | 0.515973 | 1.3:-20667469 | MS.gene95903:intron |
| TCATAAAGTTCATGGATCAC+CGG | 0.521104 | 1.3:-20668857 | MS.gene95903:CDS |
| TGGTGATGCCATCTTACTAA+AGG | 0.525689 | 1.3:-20668312 | MS.gene95903:intron |
| CAAGCCTCTCAGCCAATTCA+GGG | 0.537180 | 1.3:+20669441 | None:intergenic |
| TCCATTCGTACCAATGAAGA+TGG | 0.540221 | 1.3:-20669374 | MS.gene95903:CDS |
| TTGGTGCATCTTGAACCACT+TGG | 0.550736 | 1.3:+20668620 | None:intergenic |
| GCAGGGATAGAGCATGTTGA+AGG | 0.553467 | 1.3:-20668359 | MS.gene95903:intron |
| ACACTAGTTGATGTAGGTGG+TGG | 0.561944 | 1.3:-20668712 | MS.gene95903:CDS |
| AGTAAGATGGCATCACCACT+TGG | 0.563966 | 1.3:+20668317 | None:intergenic |
| TATATATTACCTGGATGAGT+TGG | 0.568273 | 1.3:+20668601 | None:intergenic |
| AGCTTTGCCAAAACATGGAA+AGG | 0.583092 | 1.3:-20667406 | MS.gene95903:CDS |
| TGAACGTATGTTGACTGTGT+TGG | 0.597359 | 1.3:-20669420 | MS.gene95903:CDS |
| CGATGGATTAATGCTGAGAG+TGG | 0.600634 | 1.3:+20669275 | None:intergenic |
| GGTGCATCTTGAACCACTTG+GGG | 0.609131 | 1.3:+20668622 | None:intergenic |
| GTCTCAACACTAGTTGATGT+AGG | 0.620089 | 1.3:-20668718 | MS.gene95903:CDS |
| TTTGGATTATATAATTCCTG+AGG | 0.621007 | 1.3:-20667376 | MS.gene95903:CDS |
| AACACCCTGAATTGGCTGAG+AGG | 0.629156 | 1.3:-20669445 | MS.gene95903:CDS |
| TTTGCATTGGATAAAGATGG+AGG | 0.638338 | 1.3:-20669308 | MS.gene95903:CDS |
| CTCTCAGCATTAATCCATCG+TGG | 0.651626 | 1.3:-20669272 | MS.gene95903:CDS |
| AAACATCATGATATCCACGA+TGG | 0.677658 | 1.3:+20669258 | None:intergenic |
| TCAACACTAGTTGATGTAGG+TGG | 0.684114 | 1.3:-20668715 | MS.gene95903:CDS |
| ACAAACTCAGTTTACCCCTG+AGG | 0.728893 | 1.3:-20669645 | MS.gene95903:CDS |
| ATGTTTGAAAGTGTTCCAAG+TGG | 0.742592 | 1.3:-20668332 | MS.gene95903:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTCTAATTATTAATTT+TGG | + | chr1.3:20668454-20668473 | None:intergenic | 10.0% |
| !! | CAATAAATTGATCTTTAAAT+TGG | - | chr1.3:20668796-20668815 | MS.gene95903:CDS | 15.0% |
| !! | TATGAATGAATTGAATAATT+AGG | - | chr1.3:20668396-20668415 | MS.gene95903:intron | 15.0% |
| !! | TCAAAATTATGAATAAAGAT+TGG | + | chr1.3:20669186-20669205 | None:intergenic | 15.0% |
| !!! | AATAAATACTACTTTTTTGA+AGG | + | chr1.3:20667791-20667810 | None:intergenic | 15.0% |
| !!! | AATCTTTATTCATAATTTTG+AGG | - | chr1.3:20669185-20669204 | MS.gene95903:intron | 15.0% |
| !!! | ATTTTCTTTTTTTGTTTTGT+TGG | - | chr1.3:20667670-20667689 | MS.gene95903:intron | 15.0% |
| !!! | TAAGTTTTGAAATTCATTTT+CGG | + | chr1.3:20669581-20669600 | None:intergenic | 15.0% |
| !!! | TATTTAAAAACCACATTTTT+TGG | - | chr1.3:20668621-20668640 | MS.gene95903:CDS | 15.0% |
| !!! | TGACTATTTTTACTTTATTA+TGG | - | chr1.3:20667818-20667837 | MS.gene95903:intron | 15.0% |
| !! | AAAATAGAATAAATGTGGTT+AGG | + | chr1.3:20669349-20669368 | None:intergenic | 20.0% |
| !! | AACTAATTTAGAGATCAATA+TGG | - | chr1.3:20668837-20668856 | MS.gene95903:CDS | 20.0% |
| !! | AATAAATTGTGGAAAAATAG+TGG | + | chr1.3:20668991-20669010 | None:intergenic | 20.0% |
| !! | AATTTATTTGGTTAACTAAG+TGG | - | chr1.3:20669003-20669022 | MS.gene95903:intron | 20.0% |
| !! | ACTTATGTATATATATTACC+TGG | + | chr1.3:20668261-20668280 | None:intergenic | 20.0% |
| !! | AGAGAAAAATAGAATAAATG+TGG | + | chr1.3:20669354-20669373 | None:intergenic | 20.0% |
| !! | TTAGTTAACCAAATAAATTG+TGG | + | chr1.3:20669002-20669021 | None:intergenic | 20.0% |
| !!! | AAATAAGATTTCTTTTCACA+TGG | + | chr1.3:20668606-20668625 | None:intergenic | 20.0% |
| !!! | AAATTAATGCCTTTTATTGA+AGG | + | chr1.3:20668201-20668220 | None:intergenic | 20.0% |
| !!! | AATAATTTTACAGCAATGAT+TGG | - | chr1.3:20668868-20668887 | MS.gene95903:CDS | 20.0% |
| !!! | AATCTCATGTTTTTAATACA+TGG | - | chr1.3:20669541-20669560 | MS.gene95903:CDS | 20.0% |
| !!! | ATATTCTTCTCTTTTTATAG+TGG | - | chr1.3:20668361-20668380 | MS.gene95903:intron | 20.0% |
| !!! | ATTATGTTGTTTCTTTTTTC+AGG | - | chr1.3:20667923-20667942 | MS.gene95903:intron | 20.0% |
| !!! | CTATTTTTCCACAATTTATT+TGG | - | chr1.3:20668991-20669010 | MS.gene95903:intron | 20.0% |
| !!! | TCAAATTTTTAACAAAGCAA+TGG | - | chr1.3:20668050-20668069 | MS.gene95903:intron | 20.0% |
| ! | AACTAATAATCCAGTTAATG+TGG | - | chr1.3:20669311-20669330 | MS.gene95903:CDS | 25.0% |
| ! | AATGATATTCCATTCTTTCT+AGG | + | chr1.3:20668425-20668444 | None:intergenic | 25.0% |
| ! | ACACTATATAAAGGATTTGA+GGG | - | chr1.3:20668108-20668127 | MS.gene95903:intron | 25.0% |
| ! | AGGATTCTTACACTATATAA+AGG | - | chr1.3:20668099-20668118 | MS.gene95903:intron | 25.0% |
| ! | ATCCATGAACTTTATGAAAA+TGG | + | chr1.3:20667990-20668009 | None:intergenic | 25.0% |
| ! | TACACTATATAAAGGATTTG+AGG | - | chr1.3:20668107-20668126 | MS.gene95903:intron | 25.0% |
| ! | TATTTAGAAGCTGAAAAATG+TGG | + | chr1.3:20669062-20669081 | None:intergenic | 25.0% |
| ! | TCTGAATATCCTTCAATAAA+AGG | - | chr1.3:20668189-20668208 | MS.gene95903:intron | 25.0% |
| ! | TTAACTAAGTGGAAAAATAG+TGG | - | chr1.3:20669014-20669033 | MS.gene95903:intron | 25.0% |
| ! | TTCTCCAAATATTTATAAGC+CGG | + | chr1.3:20668015-20668034 | None:intergenic | 25.0% |
| ! | TTTAGAGATCAATATGGATT+TGG | - | chr1.3:20668843-20668862 | MS.gene95903:CDS | 25.0% |
| ! | TTTGGATTATATAATTCCTG+AGG | - | chr1.3:20669474-20669493 | MS.gene95903:CDS | 25.0% |
| ! | TTTGTCAATAAGTAGTTTAG+TGG | - | chr1.3:20668666-20668685 | MS.gene95903:CDS | 25.0% |
| !! | AGAATCCTTTTCATTTCTAA+TGG | + | chr1.3:20668087-20668106 | None:intergenic | 25.0% |
| !! | ATATTTTATGCCACATTAAC+TGG | + | chr1.3:20669324-20669343 | None:intergenic | 25.0% |
| !! | CGATCGAATTTAAAATTACT+AGG | + | chr1.3:20667876-20667895 | None:intergenic | 25.0% |
| !! | TAATTTTAAATTCGATCGCT+GGG | - | chr1.3:20667878-20667897 | MS.gene95903:intron | 25.0% |
| !! | TTATTATGGTGTTAACATTC+CGG | - | chr1.3:20667832-20667851 | MS.gene95903:intron | 25.0% |
| !! | TTATTCAAACTGTTTCTTCA+AGG | - | chr1.3:20667631-20667650 | MS.gene95903:intron | 25.0% |
| !!! | ATTTTTCAGCTTCTAAATAG+TGG | - | chr1.3:20669063-20669082 | MS.gene95903:intron | 25.0% |
| !!! | CGTTGTTATTATGTTTTAGT+AGG | - | chr1.3:20667258-20667277 | MS.gene95903:CDS | 25.0% |
| !!! | TTAACTGAAATTTTTCAGAG+TGG | + | chr1.3:20668925-20668944 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTCGCTAATAAAT+TGG | - | chr1.3:20668636-20668655 | MS.gene95903:CDS | 25.0% |
| AATTGGTCAATACTTTGCAT+TGG | - | chr1.3:20667529-20667548 | MS.gene95903:intron | 30.0% | |
| ACTGCAAGCAATATGAAATT+TGG | + | chr1.3:20669623-20669642 | None:intergenic | 30.0% | |
| ATTAGGAATCCTAGAAAGAA+TGG | - | chr1.3:20668413-20668432 | MS.gene95903:intron | 30.0% | |
| TACTTTGCATTGGATAAAGA+TGG | - | chr1.3:20667539-20667558 | MS.gene95903:intron | 30.0% | |
| TATATATTACCTGGATGAGT+TGG | + | chr1.3:20668252-20668271 | None:intergenic | 30.0% | |
| TTATTAGCGACCAAAAAATG+TGG | + | chr1.3:20668634-20668653 | None:intergenic | 30.0% | |
| TTCTGTAAGTGTAACTCAAT+TGG | + | chr1.3:20668776-20668795 | None:intergenic | 30.0% | |
| TTCTTTCTTACCATCTTCAT+TGG | + | chr1.3:20667489-20667508 | None:intergenic | 30.0% | |
| ! | ACAAAAGAGTGTACACATTA+AGG | - | chr1.3:20669153-20669172 | MS.gene95903:intron | 30.0% |
| ! | AGAGTGTTTCTAATAGTCTT+GGG | - | chr1.3:20669276-20669295 | MS.gene95903:CDS | 30.0% |
| ! | CAAAAGAGTGTACACATTAA+GGG | - | chr1.3:20669154-20669173 | MS.gene95903:intron | 30.0% |
| ! | GAAAATGGTCATTGTTGTTA+GGG | + | chr1.3:20667975-20667994 | None:intergenic | 30.0% |
| ! | GACCATTTTCATAAAGTTCA+TGG | - | chr1.3:20667985-20668004 | MS.gene95903:intron | 30.0% |
| ! | GTAATTTTAAATTCGATCGC+TGG | - | chr1.3:20667877-20667896 | MS.gene95903:intron | 30.0% |
| ! | TAGAGTGTTTCTAATAGTCT+TGG | - | chr1.3:20669275-20669294 | MS.gene95903:CDS | 30.0% |
| ! | TGAAAATGGTCATTGTTGTT+AGG | + | chr1.3:20667976-20667995 | None:intergenic | 30.0% |
| !! | AATCGTTTTGAGCAATACTT+AGG | + | chr1.3:20667906-20667925 | None:intergenic | 30.0% |
| !! | AATTTTTCAGAGTGGTACAA+AGG | + | chr1.3:20668917-20668936 | None:intergenic | 30.0% |
| !! | ATCACCGGCTTATAAATATT+TGG | - | chr1.3:20668008-20668027 | MS.gene95903:intron | 30.0% |
| !! | ATTTTTCAGAGTGGTACAAA+GGG | + | chr1.3:20668916-20668935 | None:intergenic | 30.0% |
| !! | CTCATGTTTTTAATACATGG+TGG | - | chr1.3:20669544-20669563 | MS.gene95903:CDS | 30.0% |
| !! | GTTTTTAATACATGGTGGAA+AGG | - | chr1.3:20669549-20669568 | MS.gene95903:CDS | 30.0% |
| !! | TTAGCTTGTATGTCACAATT+GGG | - | chr1.3:20669381-20669400 | MS.gene95903:CDS | 30.0% |
| !! | TTTAGCTTGTATGTCACAAT+TGG | - | chr1.3:20669380-20669399 | MS.gene95903:CDS | 30.0% |
| !!! | TAATTTTGATTTACCCCAAG+TGG | - | chr1.3:20668215-20668234 | MS.gene95903:intron | 30.0% |
| AAACATCATGATATCCACGA+TGG | + | chr1.3:20667595-20667614 | None:intergenic | 35.0% | |
| ACATAATGTGTGGAAAAGTG+CGG | - | chr1.3:20668701-20668720 | MS.gene95903:CDS | 35.0% | |
| ACCAGAGAAATTATGTGCAA+GGG | + | chr1.3:20668748-20668767 | None:intergenic | 35.0% | |
| AGATTCACACACATAATGTG+TGG | - | chr1.3:20668691-20668710 | MS.gene95903:CDS | 35.0% | |
| ATAGCAGCATTTAGTATTGC+AGG | + | chr1.3:20667290-20667309 | None:intergenic | 35.0% | |
| ATCGTGGATATCATGATGTT+TGG | - | chr1.3:20667594-20667613 | MS.gene95903:intron | 35.0% | |
| CACATTAATCTTTGCTTGCA+GGG | - | chr1.3:20668474-20668493 | MS.gene95903:intron | 35.0% | |
| CTCACTAACCTTTAGTAAGA+TGG | + | chr1.3:20668549-20668568 | None:intergenic | 35.0% | |
| CTGGTCCATTAGAAATGAAA+AGG | - | chr1.3:20668079-20668098 | MS.gene95903:intron | 35.0% | |
| GGTCACACAGATCATATATT+TGG | + | chr1.3:20668948-20668967 | None:intergenic | 35.0% | |
| GGTCACACATAACATACATT+TGG | - | chr1.3:20669106-20669125 | MS.gene95903:intron | 35.0% | |
| GTCACGAAACTGAAAAAATG+TGG | - | chr1.3:20669085-20669104 | MS.gene95903:intron | 35.0% | |
| GTCACGCAACTAAAAAAATG+TGG | + | chr1.3:20668969-20668988 | None:intergenic | 35.0% | |
| GTTTATGCTCTCTCATCAAT+TGG | - | chr1.3:20667512-20667531 | MS.gene95903:intron | 35.0% | |
| TACCAGAGAAATTATGTGCA+AGG | + | chr1.3:20668749-20668768 | None:intergenic | 35.0% | |
| TCATAAAGTTCATGGATCAC+CGG | - | chr1.3:20667993-20668012 | MS.gene95903:intron | 35.0% | |
| TTTGCATTGGATAAAGATGG+AGG | - | chr1.3:20667542-20667561 | MS.gene95903:intron | 35.0% | |
| ! | ACAATCACCTTTCCATGTTT+TGG | + | chr1.3:20669454-20669473 | None:intergenic | 35.0% |
| ! | ACATGGAAAGGTGATTGTTT+TGG | - | chr1.3:20669456-20669475 | MS.gene95903:CDS | 35.0% |
| ! | CATGCTTAGAGATTTTGCTT+GGG | + | chr1.3:20669507-20669526 | None:intergenic | 35.0% |
| ! | GTTAACATTCCGGCTTTTAA+CGG | - | chr1.3:20667842-20667861 | MS.gene95903:intron | 35.0% |
| ! | TACACTCTTTTGTATCACTC+TGG | + | chr1.3:20669146-20669165 | None:intergenic | 35.0% |
| ! | TAGAGATTTTGCTTGGGTTT+GGG | + | chr1.3:20669501-20669520 | None:intergenic | 35.0% |
| ! | TGTTTCTAATAGTCTTGGGT+TGG | - | chr1.3:20669280-20669299 | MS.gene95903:CDS | 35.0% |
| ! | TTAGAGATTTTGCTTGGGTT+TGG | + | chr1.3:20669502-20669521 | None:intergenic | 35.0% |
| !! | AAACTGAGTTTGTTTGGTGT+TGG | + | chr1.3:20667198-20667217 | None:intergenic | 35.0% |
| !! | ATGTTTGAAAGTGTTCCAAG+TGG | - | chr1.3:20668518-20668537 | MS.gene95903:intron | 35.0% |
| !! | TTTTTCAGAGTGGTACAAAG+GGG | + | chr1.3:20668915-20668934 | None:intergenic | 35.0% |
| !!! | ATCAACTTTTTCAACCTCAG+GGG | + | chr1.3:20667222-20667241 | None:intergenic | 35.0% |
| !!! | CATCAACTTTTTCAACCTCA+GGG | + | chr1.3:20667223-20667242 | None:intergenic | 35.0% |
| !!! | TCATCAACTTTTTCAACCTC+AGG | + | chr1.3:20667224-20667243 | None:intergenic | 35.0% |
| AACAAAGCAATGGCTCAATC+TGG | - | chr1.3:20668060-20668079 | MS.gene95903:intron | 40.0% | |
| AAGGTTAGTGAGTACATGAG+AGG | - | chr1.3:20668557-20668576 | MS.gene95903:intron | 40.0% | |
| ACCATCTTCATTGGTACGAA+TGG | + | chr1.3:20667480-20667499 | None:intergenic | 40.0% | |
| AGCTTTGCCAAAACATGGAA+AGG | - | chr1.3:20669444-20669463 | MS.gene95903:CDS | 40.0% | |
| AGGTTAGTGAGTACATGAGA+GGG | - | chr1.3:20668558-20668577 | MS.gene95903:intron | 40.0% | |
| AGTGATATCTCAGCTATGTC+TGG | - | chr1.3:20669640-20669659 | MS.gene95903:CDS | 40.0% | |
| CAAAACTTATGCATGAGCTC+TGG | - | chr1.3:20669592-20669611 | MS.gene95903:CDS | 40.0% | |
| CACAAAGCTTTGCCAAAACA+TGG | - | chr1.3:20669439-20669458 | MS.gene95903:CDS | 40.0% | |
| GATAAAGATGGAGGCTCTTT+GGG | - | chr1.3:20667551-20667570 | MS.gene95903:intron | 40.0% | |
| GATCTTCTTCCGTTAAAAGC+CGG | + | chr1.3:20667854-20667873 | None:intergenic | 40.0% | |
| GCACATTAATCTTTGCTTGC+AGG | - | chr1.3:20668473-20668492 | MS.gene95903:intron | 40.0% | |
| TCCAAATCAACACCCTGAAT+TGG | - | chr1.3:20667397-20667416 | MS.gene95903:CDS | 40.0% | |
| TCCATTCGTACCAATGAAGA+TGG | - | chr1.3:20667476-20667495 | MS.gene95903:intron | 40.0% | |
| ! | ACAAAGGGGTGTACACATTA+AGG | + | chr1.3:20668901-20668920 | None:intergenic | 40.0% |
| ! | AGGGGTAAACTGAGTTTGTT+TGG | + | chr1.3:20667204-20667223 | None:intergenic | 40.0% |
| ! | CAAAGGGGTGTACACATTAA+GGG | + | chr1.3:20668900-20668919 | None:intergenic | 40.0% |
| ! | GCATGCTTAGAGATTTTGCT+TGG | + | chr1.3:20669508-20669527 | None:intergenic | 40.0% |
| ! | GTCTCAACACTAGTTGATGT+AGG | - | chr1.3:20668132-20668151 | MS.gene95903:intron | 40.0% |
| ! | TCAACACTAGTTGATGTAGG+TGG | - | chr1.3:20668135-20668154 | MS.gene95903:intron | 40.0% |
| ! | TGAACGTATGTTGACTGTGT+TGG | - | chr1.3:20667430-20667449 | MS.gene95903:CDS | 40.0% |
| ! | TGGTGATGCCATCTTACTAA+AGG | - | chr1.3:20668538-20668557 | MS.gene95903:intron | 40.0% |
| ACAAACTCAGTTTACCCCTG+AGG | - | chr1.3:20667205-20667224 | MS.gene95903:CDS | 45.0% | |
| AGTAAGATGGCATCACCACT+TGG | + | chr1.3:20668536-20668555 | None:intergenic | 45.0% | |
| CTCTCAGCATTAATCCATCG+TGG | - | chr1.3:20667578-20667597 | MS.gene95903:intron | 45.0% | |
| GAGAAATTATGTGCAAGGGC+CGG | + | chr1.3:20668744-20668763 | None:intergenic | 45.0% | |
| GCAAGTGAGAAGAGAGTAAC+TGG | + | chr1.3:20667456-20667475 | None:intergenic | 45.0% | |
| GCCCTTGCACATAATTTCTC+TGG | - | chr1.3:20668744-20668763 | MS.gene95903:CDS | 45.0% | |
| GGATAAAGATGGAGGCTCTT+TGG | - | chr1.3:20667550-20667569 | MS.gene95903:intron | 45.0% | |
| TGGTGCATCTTGAACCACTT+GGG | + | chr1.3:20668232-20668251 | None:intergenic | 45.0% | |
| TTGGTGCATCTTGAACCACT+TGG | + | chr1.3:20668233-20668252 | None:intergenic | 45.0% | |
| ! | ACACTAGTTGATGTAGGTGG+TGG | - | chr1.3:20668138-20668157 | MS.gene95903:intron | 45.0% |
| ! | CTCAGCTATGTCTGGAGTAA+TGG | - | chr1.3:20669648-20669667 | MS.gene95903:CDS | 45.0% |
| !! | CGATGGATTAATGCTGAGAG+TGG | + | chr1.3:20667578-20667597 | None:intergenic | 45.0% |
| !! | GCCAATTCAGGGTGTTGATT+TGG | + | chr1.3:20667401-20667420 | None:intergenic | 45.0% |
| !! | TTGATGTAGGTGGTGGAGTA+GGG | - | chr1.3:20668145-20668164 | MS.gene95903:intron | 45.0% |
| AACACCCTGAATTGGCTGAG+AGG | - | chr1.3:20667405-20667424 | MS.gene95903:CDS | 50.0% | |
| CAAGATGCACCAACTCATCC+AGG | - | chr1.3:20668240-20668259 | MS.gene95903:intron | 50.0% | |
| CAAGCCTCTCAGCCAATTCA+GGG | + | chr1.3:20667412-20667431 | None:intergenic | 50.0% | |
| GCAGGGATAGAGCATGTTGA+AGG | - | chr1.3:20668491-20668510 | MS.gene95903:intron | 50.0% | |
| GGTGCATCTTGAACCACTTG+GGG | + | chr1.3:20668231-20668250 | None:intergenic | 50.0% | |
| TCAAGCCTCTCAGCCAATTC+AGG | + | chr1.3:20667413-20667432 | None:intergenic | 50.0% | |
| ! | GTGTGGAAAAGTGCGGAATC+CGG | - | chr1.3:20668708-20668727 | MS.gene95903:CDS | 50.0% |
| ! | TGTGGAAAAGTGCGGAATCC+GGG | - | chr1.3:20668709-20668728 | MS.gene95903:CDS | 50.0% |
| !! | GTTGATGTAGGTGGTGGAGT+AGG | - | chr1.3:20668144-20668163 | MS.gene95903:intron | 50.0% |
| GGAATCCGGGGTTCAAACTC+CGG | - | chr1.3:20668722-20668741 | MS.gene95903:CDS | 55.0% | |
| ! | GTGGAAAAGTGCGGAATCCG+GGG | - | chr1.3:20668710-20668729 | MS.gene95903:CDS | 55.0% |
| ! | TTGCTTGGGTTTGGGACCTC+AGG | + | chr1.3:20669493-20669512 | None:intergenic | 55.0% |
| AAGGGCCGGAGTTTGAACCC+CGG | + | chr1.3:20668730-20668749 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 20667188 | 20669684 | 20667188 | ID=MS.gene95903 |
| chr1.3 | mRNA | 20667188 | 20669684 | 20667188 | ID=MS.gene95903.t1;Parent=MS.gene95903 |
| chr1.3 | exon | 20669257 | 20669684 | 20669257 | ID=MS.gene95903.t1.exon1;Parent=MS.gene95903.t1 |
| chr1.3 | CDS | 20669257 | 20669684 | 20669257 | ID=cds.MS.gene95903.t1;Parent=MS.gene95903.t1 |
| chr1.3 | exon | 20668611 | 20668927 | 20668611 | ID=MS.gene95903.t1.exon2;Parent=MS.gene95903.t1 |
| chr1.3 | CDS | 20668611 | 20668927 | 20668611 | ID=cds.MS.gene95903.t1;Parent=MS.gene95903.t1 |
| chr1.3 | exon | 20668313 | 20668377 | 20668313 | ID=MS.gene95903.t1.exon3;Parent=MS.gene95903.t1 |
| chr1.3 | CDS | 20668313 | 20668377 | 20668313 | ID=cds.MS.gene95903.t1;Parent=MS.gene95903.t1 |
| chr1.3 | exon | 20667188 | 20667487 | 20667188 | ID=MS.gene95903.t1.exon4;Parent=MS.gene95903.t1 |
| chr1.3 | CDS | 20667188 | 20667487 | 20667188 | ID=cds.MS.gene95903.t1;Parent=MS.gene95903.t1 |
| Gene Sequence |
| Protein sequence |
