Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96480.t1 | XP_013443378.1 | 95.7 | 305 | 13 | 0 | 1 | 305 | 1 | 305 | 5.60E-160 | 573.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96480.t1 | Q8N5M1 | 31.6 | 225 | 144 | 5 | 83 | 305 | 47 | 263 | 8.6e-24 | 112.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96480.t1 | A0A072TKN2 | 95.7 | 305 | 13 | 0 | 1 | 305 | 1 | 305 | 4.1e-160 | 573.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27003 | MS.gene96480 | PPI |
| MS.gene24232 | MS.gene96480 | PPI |
| MS.gene36891 | MS.gene96480 | PPI |
| MS.gene053439 | MS.gene96480 | PPI |
| MS.gene073885 | MS.gene96480 | PPI |
| MS.gene39553 | MS.gene96480 | PPI |
| MS.gene063717 | MS.gene96480 | PPI |
| MS.gene26606 | MS.gene96480 | PPI |
| MS.gene63685 | MS.gene96480 | PPI |
| MS.gene90723 | MS.gene96480 | PPI |
| MS.gene061619 | MS.gene96480 | PPI |
| MS.gene47555 | MS.gene96480 | PPI |
| MS.gene26425 | MS.gene96480 | PPI |
| MS.gene27265 | MS.gene96480 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96480.t1 | MTR_0018s0290 | 95.738 | 305 | 13 | 0 | 1 | 305 | 1 | 305 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96480.t1 | AT5G40660 | 67.000 | 300 | 94 | 2 | 7 | 305 | 14 | 309 | 3.78e-139 | 396 |
Find 0 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAAAAATTTGTGA+AGG | - | 51891:22208-22227 | MS.gene96480:intergenic | 10.0% |
| !!! | AAGTTATTTTTTTTTTCATT+AGG | + | 51891:21079-21098 | MS.gene96480:intron | 10.0% |
| !!! | ACTTTATATTCTGTTTTATA+TGG | + | 51891:22320-22339 | MS.gene96480:intron | 15.0% |
| !!! | ACTTTTAACATATCAATTTT+AGG | + | 51891:22744-22763 | MS.gene96480:intron | 15.0% |
| !!! | ATTAATTCATTTTTTCATGT+TGG | + | 51891:23047-23066 | MS.gene96480:intron | 15.0% |
| !! | AAATTATTCTTGATGAATTG+AGG | + | 51891:22233-22252 | MS.gene96480:intron | 20.0% |
| !! | AAGTTATGATCAAATACAAT+CGG | + | 51891:22100-22119 | MS.gene96480:intron | 20.0% |
| !! | ATTTAGAAAAGTGATATTGA+TGG | + | 51891:22800-22819 | MS.gene96480:intron | 20.0% |
| !!! | ATCAAATGCTCAATAATTTT+GGG | - | 51891:22495-22514 | MS.gene96480:intergenic | 20.0% |
| !!! | CTTTTAAATATTTCCAATGA+CGG | - | 51891:22287-22306 | MS.gene96480:intergenic | 20.0% |
| !!! | GATTTTCTATTAGTTTACTT+AGG | + | 51891:22993-23012 | MS.gene96480:intron | 20.0% |
| !!! | TATTCTGTTTTATATGGTTA+TGG | + | 51891:22326-22345 | MS.gene96480:intron | 20.0% |
| !!! | TGTGAAGGTTTTAATAAAAA+TGG | - | 51891:22193-22212 | MS.gene96480:intergenic | 20.0% |
| !!! | TTAACATATCAATTTTAGGA+TGG | + | 51891:22748-22767 | MS.gene96480:intron | 20.0% |
| ! | AGATATAGAGATTAATGAGT+TGG | + | 51891:21539-21558 | MS.gene96480:intron | 25.0% |
| ! | AGGATTGTAAGCTAATATTT+AGG | + | 51891:22253-22272 | MS.gene96480:intron | 25.0% |
| ! | AGGTTAGTGTAAATGAAATT+TGG | + | 51891:21099-21118 | MS.gene96480:intron | 25.0% |
| ! | AGTACATGAATGTGAATTAT+AGG | + | 51891:23668-23687 | MS.gene96480:intron | 25.0% |
| ! | ATATTGACATAGCTGATATT+AGG | + | 51891:24042-24061 | MS.gene96480:CDS | 25.0% |
| ! | CACAAGATAAAATAGTAGTA+AGG | + | 51891:21436-21455 | MS.gene96480:intron | 25.0% |
| ! | CATCAAAAACATTATTGTCT+TGG | + | 51891:22149-22168 | MS.gene96480:intron | 25.0% |
| ! | CGTCATTGGAAATATTTAAA+AGG | + | 51891:22285-22304 | MS.gene96480:intron | 25.0% |
| ! | GTAGATAAGTTAATCAAAAG+AGG | + | 51891:21756-21775 | MS.gene96480:intron | 25.0% |
| ! | TAAAGCTAATTGAAAAGTCA+AGG | + | 51891:22033-22052 | MS.gene96480:intron | 25.0% |
| ! | TAAGGTTTCTAACAGAAAAT+AGG | - | 51891:23822-23841 | MS.gene96480:intergenic | 25.0% |
| ! | TTATCATTGTAGCAAATAGA+TGG | + | 51891:22399-22418 | MS.gene96480:intron | 25.0% |
| !! | AGAGAAGAATTTTATGATGT+GGG | + | 51891:23739-23758 | MS.gene96480:intron | 25.0% |
| !! | CATCAAATGCTCAATAATTT+TGG | - | 51891:22496-22515 | MS.gene96480:intergenic | 25.0% |
| !! | GTTTCTGTTATAGTTTTTCT+AGG | - | 51891:21510-21529 | MS.gene96480:intergenic | 25.0% |
| !! | TAGAGAAGAATTTTATGATG+TGG | + | 51891:23738-23757 | MS.gene96480:intron | 25.0% |
| !! | TCTGTTATCCTAAAAAGTAT+TGG | - | 51891:23210-23229 | MS.gene96480:intergenic | 25.0% |
| !!! | AAAAGTGATATTGATGGTTT+TGG | + | 51891:22806-22825 | MS.gene96480:intron | 25.0% |
| !!! | AAAGTGATATTGATGGTTTT+GGG | + | 51891:22807-22826 | MS.gene96480:intron | 25.0% |
| !!! | AATATTTTAGCTTTACCTAC+TGG | + | 51891:23147-23166 | MS.gene96480:intron | 25.0% |
| !!! | ATTTTTTCATGTTGGCTATA+TGG | + | 51891:23055-23074 | MS.gene96480:intron | 25.0% |
| AAGGATAGTCATATCACTAA+AGG | + | 51891:21474-21493 | MS.gene96480:intron | 30.0% | |
| AATAATTCTATCACTCCAGT+AGG | - | 51891:23165-23184 | MS.gene96480:intergenic | 30.0% | |
| AATGTGAATTATAGGACTCT+TGG | + | 51891:23676-23695 | MS.gene96480:intron | 30.0% | |
| AATTATAGGACTCTTGGTTT+GGG | + | 51891:23682-23701 | MS.gene96480:intron | 30.0% | |
| ATCATCTTTCACATTCTCAT+CGG | + | 51891:20712-20731 | MS.gene96480:CDS | 30.0% | |
| ATCTTCTCTCTATGACAATA+AGG | + | 51891:22921-22940 | MS.gene96480:intron | 30.0% | |
| ATTAACAATTGCCATTGCAT+TGG | + | 51891:23481-23500 | MS.gene96480:CDS | 30.0% | |
| GAAATTGTTAGAATATGCGA+GGG | + | 51891:23761-23780 | MS.gene96480:intron | 30.0% | |
| TAAATAGTTTCCATTGCCAT+AGG | - | 51891:22845-22864 | MS.gene96480:intergenic | 30.0% | |
| TACCATATTAAGCTTAGTTG+CGG | - | 51891:23716-23735 | MS.gene96480:intergenic | 30.0% | |
| TAGACTTGAAGAAGATTTAC+AGG | + | 51891:23544-23563 | MS.gene96480:CDS | 30.0% | |
| TATCAGCTATGTCAATATCA+TGG | - | 51891:24040-24059 | MS.gene96480:intergenic | 30.0% | |
| TATTTGATCATAACTTTCCG+TGG | - | 51891:22096-22115 | MS.gene96480:intergenic | 30.0% | |
| TCTCTCTTCTCTCTTAATTT+GGG | + | 51891:23933-23952 | MS.gene96480:intron | 30.0% | |
| TGAATAATCAGCTAAATTGC+AGG | + | 51891:22964-22983 | MS.gene96480:intron | 30.0% | |
| TGCTTATTATATGAGCTGTT+AGG | + | 51891:21398-21417 | MS.gene96480:intron | 30.0% | |
| TTATATGGTTATGGTTGCAT+AGG | + | 51891:22335-22354 | MS.gene96480:intron | 30.0% | |
| TTCTCTCTTCTCTCTTAATT+TGG | + | 51891:23932-23951 | MS.gene96480:intron | 30.0% | |
| ! | AAGTCTTATGTCACTAAGTA+GGG | - | 51891:21600-21619 | MS.gene96480:intergenic | 30.0% |
| ! | ATGCTTTACCAAAACTTGTT+TGG | - | 51891:21298-21317 | MS.gene96480:intergenic | 30.0% |
| ! | ATGTCTTCATTCTCTTTTTC+AGG | + | 51891:23986-24005 | MS.gene96480:intron | 30.0% |
| ! | TAATGAGTTGGACTGAATTA+TGG | + | 51891:21551-21570 | MS.gene96480:intron | 30.0% |
| !! | AAGTGATATTGATGGTTTTG+GGG | + | 51891:22808-22827 | MS.gene96480:intron | 30.0% |
| !! | CTTGTTGACCAATACTTTTT+AGG | + | 51891:23199-23218 | MS.gene96480:intron | 30.0% |
| AAAAAGCTGGAGTATACAAC+AGG | - | 51891:23353-23372 | None:intergenic | 35.0% | |
| AAAAGAGAAGACTGTCTCTA+AGG | - | 51891:23840-23859 | None:intergenic | 35.0% | |
| AAAATCCTACCACATGATGA+AGG | - | 51891:21806-21825 | None:intergenic | 35.0% | |
| AAATCCTACCACATGATGAA+GGG | - | 51891:21805-21824 | None:intergenic | 35.0% | |
| AAATTGATCCTCTACTACAC+TGG | + | 51891:23303-23322 | MS.gene96480:CDS | 35.0% | |
| AAGGAGAGTAGATTAGATGA+AGG | + | 51891:21455-21474 | MS.gene96480:intron | 35.0% | |
| AATAAATCTAAGTTGCCTCG+AGG | + | 51891:21884-21903 | MS.gene96480:intron | 35.0% | |
| AATATTTCCAATGACGGTCA+AGG | - | 51891:22281-22300 | MS.gene96480:intergenic | 35.0% | |
| ACCATATTAAGCTTAGTTGC+GGG | - | 51891:23715-23734 | MS.gene96480:intergenic | 35.0% | |
| ACTAAGTAGGGTCAGTTATA+TGG | - | 51891:21588-21607 | MS.gene96480:intergenic | 35.0% | |
| AGAGGGTGGATAGAAATTTA+GGG | - | 51891:20634-20653 | MS.gene96480:intergenic | 35.0% | |
| ATAAATCTAAGTTGCCTCGA+GGG | + | 51891:21885-21904 | MS.gene96480:intron | 35.0% | |
| ATATTTCCAATGACGGTCAA+GGG | - | 51891:22280-22299 | MS.gene96480:intergenic | 35.0% | |
| ATTGAGATCAGAGATCTGAA+AGG | - | 51891:22615-22634 | MS.gene96480:intergenic | 35.0% | |
| CAATAACTAACACCATACCA+TGG | - | 51891:22584-22603 | MS.gene96480:intergenic | 35.0% | |
| CACGGCAAAATACTAAATCT+TGG | - | 51891:22530-22549 | MS.gene96480:intergenic | 35.0% | |
| CTACTTAGTGACATAAGACT+TGG | + | 51891:21599-21618 | MS.gene96480:intron | 35.0% | |
| CTGAATGGGATTATCAAGTA+TGG | + | 51891:20978-20997 | MS.gene96480:intron | 35.0% | |
| CTGAGTATACTGAACTTGAA+GGG | + | 51891:22668-22687 | MS.gene96480:intron | 35.0% | |
| GAAAACAGATGACTGTGAAT+TGG | + | 51891:23424-23443 | MS.gene96480:CDS | 35.0% | |
| GAAGAAGATTTACAGGTACT+TGG | + | 51891:23551-23570 | MS.gene96480:intron | 35.0% | |
| GAATTATAGGACTCTTGGTT+TGG | + | 51891:23681-23700 | MS.gene96480:intron | 35.0% | |
| GATCCCGTCATAAAAGAAAT+CGG | - | 51891:20806-20825 | MS.gene96480:intergenic | 35.0% | |
| GCATAGCTCATTTACCTATA+TGG | + | 51891:21314-21333 | MS.gene96480:intron | 35.0% | |
| GGAAATTGTTAGAATATGCG+AGG | + | 51891:23760-23779 | MS.gene96480:intron | 35.0% | |
| GGGAAAATATATGTTGAGTG+AGG | + | 51891:21846-21865 | MS.gene96480:intron | 35.0% | |
| TAATCAAAAGAGGTCCTAAG+TGG | + | 51891:21766-21785 | MS.gene96480:intron | 35.0% | |
| TACTTAGGTCTATATGTCTC+AGG | + | 51891:23008-23027 | MS.gene96480:intron | 35.0% | |
| TAGAATATGCGAGGGAATAT+AGG | + | 51891:23769-23788 | MS.gene96480:intron | 35.0% | |
| TGATTCATCTGTGCTTCATT+GGG | + | 51891:21008-21027 | MS.gene96480:intron | 35.0% | |
| TTGATTCATCTGTGCTTCAT+TGG | + | 51891:21007-21026 | MS.gene96480:intron | 35.0% | |
| ! | ATGATTTTCAGAAAGATGCG+TGG | + | 51891:23237-23256 | MS.gene96480:intron | 35.0% |
| ! | CAAGTCTTATGTCACTAAGT+AGG | - | 51891:21601-21620 | MS.gene96480:intergenic | 35.0% |
| ! | CATAGATGCCAAACAAGTTT+TGG | + | 51891:21287-21306 | MS.gene96480:intron | 35.0% |
| ! | GAGGATCAATTTTCTCAACT+TGG | - | 51891:23295-23314 | MS.gene96480:intergenic | 35.0% |
| !! | ACCTATATGGTGTTGCATTA+AGG | + | 51891:21327-21346 | MS.gene96480:intron | 35.0% |
| !! | CTCATAAGAGGCATTGTAAA+GGG | - | 51891:22432-22451 | MS.gene96480:intergenic | 35.0% |
| !! | TCTCATAAGAGGCATTGTAA+AGG | - | 51891:22433-22452 | MS.gene96480:intergenic | 35.0% |
| !!! | ATGCCGATTTCTTTTATGAC+GGG | + | 51891:20800-20819 | MS.gene96480:CDS | 35.0% |
| !!! | GATGCCGATTTCTTTTATGA+CGG | + | 51891:20799-20818 | MS.gene96480:CDS | 35.0% |
| !!! | GTTGTATACTCCAGCTTTTT+TGG | + | 51891:23353-23372 | MS.gene96480:CDS | 35.0% |
| !!! | TCTTCATTCTCTTTTTCAGG+TGG | + | 51891:23989-24008 | MS.gene96480:intron | 35.0% |
| AATAACAGCTTCCACAGATG+AGG | - | 51891:23122-23141 | MS.gene96480:intergenic | 40.0% | |
| ACTAAAGTCCCTTCATCATG+TGG | + | 51891:21794-21813 | MS.gene96480:intron | 40.0% | |
| AGAAGTGAAGACAAGAGAAG+CGG | + | 51891:20850-20869 | MS.gene96480:CDS | 40.0% | |
| ATCCCAGAGAAAATGCTCAT+CGG | - | 51891:23863-23882 | MS.gene96480:intergenic | 40.0% | |
| ATCTTTCACATTCTCATCGG+AGG | + | 51891:20715-20734 | MS.gene96480:CDS | 40.0% | |
| CCATATTAAGCTTAGTTGCG+GGG | - | 51891:23714-23733 | MS.gene96480:intergenic | 40.0% | |
| CTTCATGTTTACCTCATCTG+TGG | + | 51891:23108-23127 | MS.gene96480:intron | 40.0% | |
| GACTTTAGTACCTACCACTT+AGG | - | 51891:21783-21802 | MS.gene96480:intergenic | 40.0% | |
| GAGAGGGTGGATAGAAATTT+AGG | - | 51891:20635-20654 | MS.gene96480:intergenic | 40.0% | |
| GCATGGGAAATTGCAAATTG+AGG | + | 51891:23505-23524 | MS.gene96480:CDS | 40.0% | |
| GCCTTAATGCAACACCATAT+AGG | - | 51891:21331-21350 | MS.gene96480:intergenic | 40.0% | |
| GCTGAGTATACTGAACTTGA+AGG | + | 51891:22667-22686 | MS.gene96480:intron | 40.0% | |
| GGTGCAGTGATTACTATACA+GGG | + | 51891:22885-22904 | MS.gene96480:intron | 40.0% | |
| GTATAGTAATCACTGCACCA+AGG | - | 51891:22884-22903 | MS.gene96480:intergenic | 40.0% | |
| TAAATCTAAGTTGCCTCGAG+GGG | + | 51891:21886-21905 | MS.gene96480:intron | 40.0% | |
| TAACGCTATTGCTGCTGAAT+GGG | + | 51891:20964-20983 | MS.gene96480:CDS | 40.0% | |
| TACTCAGCATGTATTTCGTC+AGG | - | 51891:22655-22674 | MS.gene96480:intergenic | 40.0% | |
| TGCTGCAATAGCATCAATTG+CGG | - | 51891:23450-23469 | MS.gene96480:intergenic | 40.0% | |
| TGGTGCAGTGATTACTATAC+AGG | + | 51891:22884-22903 | MS.gene96480:intron | 40.0% | |
| TGTATTTCGTCAGGCAATCA+CGG | - | 51891:22646-22665 | MS.gene96480:intergenic | 40.0% | |
| TTAGGTCTATATGTCTCAGG+AGG | + | 51891:23011-23030 | MS.gene96480:intron | 40.0% | |
| TTGTTTGTCCAACTCCAAAC+AGG | - | 51891:21353-21372 | MS.gene96480:intergenic | 40.0% | |
| ! | AAGTTCTACAGTTCTGACCT+TGG | + | 51891:22864-22883 | MS.gene96480:intron | 40.0% |
| ! | ATTTTCCCATACACATAGCC+AGG | - | 51891:21834-21853 | MS.gene96480:intergenic | 40.0% |
| ! | TTATGACGGGATCGATTGTA+GGG | + | 51891:20813-20832 | MS.gene96480:CDS | 40.0% |
| ! | TTCCGATGAGCATTTTCTCT+GGG | + | 51891:23858-23877 | MS.gene96480:intron | 40.0% |
| ! | TTTATGACGGGATCGATTGT+AGG | + | 51891:20812-20831 | MS.gene96480:CDS | 40.0% |
| ! | TTTCCGATGAGCATTTTCTC+TGG | + | 51891:23857-23876 | MS.gene96480:intron | 40.0% |
| ! | TTTTCCCATACACATAGCCA+GGG | - | 51891:21833-21852 | MS.gene96480:intergenic | 40.0% |
| !! | ATAATTTTGGGCCTTGTCAC+AGG | - | 51891:22483-22502 | MS.gene96480:intergenic | 40.0% |
| !! | TCTTGGCATATTTGCTGTTG+CGG | + | 51891:22166-22185 | MS.gene96480:intron | 40.0% |
| !!! | ATTCTCTTTTTCAGGTGGAC+AGG | + | 51891:23994-24013 | MS.gene96480:intron | 40.0% |
| !!! | ATTGATGGTTTTGGGGTCAT+AGG | + | 51891:22815-22834 | MS.gene96480:intron | 40.0% |
| !!! | CATTTTCTCTGGGATTACAC+GGG | + | 51891:23868-23887 | MS.gene96480:intron | 40.0% |
| !!! | GCATTTTCTCTGGGATTACA+CGG | + | 51891:23867-23886 | MS.gene96480:intron | 40.0% |
| !!! | GTATACTCCAGCTTTTTTGG+TGG | + | 51891:23356-23375 | MS.gene96480:CDS | 40.0% |
| AAGACAAGAGAAGCGGATGA+TGG | + | 51891:20857-20876 | MS.gene96480:CDS | 45.0% | |
| AAGTCCCTTCATCATGTGGT+AGG | + | 51891:21798-21817 | MS.gene96480:intron | 45.0% | |
| AATATCCGTGCTTCACGGTT+TGG | - | 51891:21143-21162 | MS.gene96480:intergenic | 45.0% | |
| AGTTGCATGTGGGGATACTT+TGG | + | 51891:21919-21938 | MS.gene96480:intron | 45.0% | |
| CAAAAGAGGTCCTAAGTGGT+AGG | + | 51891:21770-21789 | MS.gene96480:intron | 45.0% | |
| CCCCGCAACTAAGCTTAATA+TGG | + | 51891:23711-23730 | MS.gene96480:intron | 45.0% | |
| CTAACGCTATTGCTGCTGAA+TGG | + | 51891:20963-20982 | MS.gene96480:CDS | 45.0% | |
| CTATCCCTGGCTATGTGTAT+GGG | + | 51891:21826-21845 | MS.gene96480:intron | 45.0% | |
| CTGCTTTCCACCAAAAAAGC+TGG | - | 51891:23366-23385 | MS.gene96480:intergenic | 45.0% | |
| GCAACAGTAGGAAGCTTAAG+CGG | - | 51891:20938-20957 | MS.gene96480:intergenic | 45.0% | |
| GCATTGAAACCTCACTACCA+CGG | + | 51891:22076-22095 | MS.gene96480:intron | 45.0% | |
| GTGCAAGCAAGTCTCATAAG+AGG | - | 51891:22444-22463 | MS.gene96480:intergenic | 45.0% | |
| GTGTCAATATCCGTGCTTCA+CGG | - | 51891:21148-21167 | MS.gene96480:intergenic | 45.0% | |
| GTGTTGCATTAAGGCCTGTT+TGG | + | 51891:21336-21355 | MS.gene96480:intron | 45.0% | |
| TATCATGGCCACCTTCAACA+AGG | - | 51891:24025-24044 | MS.gene96480:intergenic | 45.0% | |
| TCTATCCCTGGCTATGTGTA+TGG | + | 51891:21825-21844 | MS.gene96480:intron | 45.0% | |
| TGAAGCACGGATATTGACAC+CGG | + | 51891:21148-21167 | MS.gene96480:intron | 45.0% | |
| TGATCCTCTACTACACTGGT+TGG | + | 51891:23307-23326 | MS.gene96480:CDS | 45.0% | |
| TTTCCCATGCACCAATGCAA+TGG | - | 51891:23495-23514 | MS.gene96480:intergenic | 45.0% | |
| TTTGGTGGAAAGCAGGAAGA+TGG | + | 51891:23371-23390 | MS.gene96480:CDS | 45.0% | |
| ! | AGAGAAGCGGATGATGGTAA+TGG | + | 51891:20863-20882 | MS.gene96480:CDS | 45.0% |
| ! | ATACTGAACTTGAAGGGTGC+TGG | + | 51891:22674-22693 | MS.gene96480:intron | 45.0% |
| ! | ATTGCCATTGCATTGGTGCA+TGG | + | 51891:23488-23507 | MS.gene96480:CDS | 45.0% |
| ! | CACTGGTTGGAGTCAGAATT+TGG | + | 51891:23320-23339 | MS.gene96480:CDS | 45.0% |
| ! | CATAACTTTCCGTGGTAGTG+AGG | - | 51891:22088-22107 | MS.gene96480:intergenic | 45.0% |
| ! | CATTAAGGCCTGTTTGGAGT+TGG | + | 51891:21342-21361 | MS.gene96480:intron | 45.0% |
| ! | GTGGTAGGATTTTCTATCCC+TGG | + | 51891:21813-21832 | MS.gene96480:intron | 45.0% |
| ! | TTGCCATTGCATTGGTGCAT+GGG | + | 51891:23489-23508 | MS.gene96480:CDS | 45.0% |
| !! | AAGCGGATGATGGTAATGGT+TGG | + | 51891:20867-20886 | MS.gene96480:CDS | 45.0% |
| !! | TACTGAACTTGAAGGGTGCT+GGG | + | 51891:22675-22694 | MS.gene96480:intron | 45.0% |
| !!! | CAGCTTTTTTGGTGGAAAGC+AGG | + | 51891:23364-23383 | MS.gene96480:CDS | 45.0% |
| !!! | TCTTTTTCAGGTGGACAGGT+GGG | + | 51891:23998-24017 | MS.gene96480:intron | 45.0% |
| !! | AAAAAATGAATTAATATTTA+TGG | - | 51891:23042-23061 | MS.gene96480:intergenic | 5.0% |
| AGATGATGACTGCTCCTCGT+CGG | - | 51891:20699-20718 | MS.gene96480:intergenic | 50.0% | |
| AGCTTAAGCGGTCTCTTAGC+AGG | - | 51891:20926-20945 | MS.gene96480:intergenic | 50.0% | |
| ATAGGAGCAGAGAGGAGAGT+GGG | + | 51891:23787-23806 | MS.gene96480:intron | 50.0% | |
| CATAGGCTTGCCTATGGCAA+TGG | + | 51891:22832-22851 | MS.gene96480:intron | 50.0% | |
| CGGGATCGATTGTAGGGAAA+AGG | + | 51891:20819-20838 | MS.gene96480:CDS | 50.0% | |
| CTTGCGAGTTCACTGTCATC+AGG | - | 51891:22555-22574 | MS.gene96480:intergenic | 50.0% | |
| GAATGCCAAACCGTGAAGCA+CGG | + | 51891:21135-21154 | MS.gene96480:intron | 50.0% | |
| GACTCCAACCAGTGTAGTAG+AGG | - | 51891:23314-23333 | MS.gene96480:intergenic | 50.0% | |
| GAGGGAATATAGGAGCAGAG+AGG | + | 51891:23779-23798 | MS.gene96480:intron | 50.0% | |
| GCACAGACACTCCTCGAATT+AGG | - | 51891:21265-21284 | MS.gene96480:intergenic | 50.0% | |
| GCGTTAGCAAGAGCAACAGT+AGG | - | 51891:20950-20969 | MS.gene96480:intergenic | 50.0% | |
| GTTCACTGTCATCAGGAGCA+CGG | - | 51891:22548-22567 | MS.gene96480:intergenic | 50.0% | |
| TAAGCTTAGTTGCGGGGCTT+AGG | - | 51891:23708-23727 | MS.gene96480:intergenic | 50.0% | |
| TATAGGAGCAGAGAGGAGAG+TGG | + | 51891:23786-23805 | MS.gene96480:intron | 50.0% | |
| TCTCAACTTGGCGTTCTGCA+AGG | - | 51891:23283-23302 | MS.gene96480:intergenic | 50.0% | |
| TGACAGTGAACTCGCAAGCA+TGG | + | 51891:22557-22576 | MS.gene96480:CDS | 50.0% | |
| TGCTTGCACTGCCTTGGAAA+GGG | + | 51891:22455-22474 | MS.gene96480:CDS | 50.0% | |
| TGGAAAGGGTTCCTGTGACA+AGG | + | 51891:22469-22488 | MS.gene96480:CDS | 50.0% | |
| TGTCACAGGAACCCTTTCCA+AGG | - | 51891:22469-22488 | MS.gene96480:intergenic | 50.0% | |
| TTAGGTCCCTTGACCGTCAT+TGG | + | 51891:22271-22290 | MS.gene96480:intron | 50.0% | |
| TTGCTTGCACTGCCTTGGAA+AGG | + | 51891:22454-22473 | MS.gene96480:CDS | 50.0% | |
| ! | AATCGGTTCAGCTGCAGTTG+GGG | + | 51891:22117-22136 | MS.gene96480:intron | 50.0% |
| ! | ACAATCGGTTCAGCTGCAGT+TGG | + | 51891:22115-22134 | MS.gene96480:intron | 50.0% |
| ! | CAATCGGTTCAGCTGCAGTT+GGG | + | 51891:22116-22135 | MS.gene96480:intron | 50.0% |
| !! | ACTGAACTTGAAGGGTGCTG+GGG | + | 51891:22676-22695 | MS.gene96480:intron | 50.0% |
| !! | GCAGGAAGATGGTCTTGTGA+TGG | + | 51891:23382-23401 | MS.gene96480:CDS | 50.0% |
| !!! | CTCTTTTTCAGGTGGACAGG+TGG | + | 51891:23997-24016 | MS.gene96480:intron | 50.0% |
| !!! | CTTTTTCAGGTGGACAGGTG+GGG | + | 51891:23999-24018 | MS.gene96480:intron | 50.0% |
| AAGTGTCACGTGTCCGACAC+GGG | + | 51891:21233-21252 | MS.gene96480:intron | 55.0% | |
| AATTAGGCGTGTCCCCGTGT+CGG | - | 51891:21249-21268 | MS.gene96480:intergenic | 55.0% | |
| CAAGTGTCACGTGTCCGACA+CGG | + | 51891:21232-21251 | MS.gene96480:intron | 55.0% | |
| CGCAAGCATGGTCCATGGTA+TGG | + | 51891:22569-22588 | MS.gene96480:intron | 55.0% | |
| CGGATATTGACACCGGACAC+TGG | + | 51891:21155-21174 | MS.gene96480:intron | 55.0% | |
| CTAGCGTCGCAGTTGCATGT+GGG | + | 51891:21909-21928 | MS.gene96480:intron | 55.0% | |
| GAACTCGCAAGCATGGTCCA+TGG | + | 51891:22564-22583 | MS.gene96480:CDS | 55.0% | |
| GAGGCGTAAACTGTCGTCGT+CGG | + | 51891:20772-20791 | MS.gene96480:CDS | 55.0% | |
| TAGCGTCGCAGTTGCATGTG+GGG | + | 51891:21910-21929 | MS.gene96480:intron | 55.0% | |
| TAGGAGCAGAGAGGAGAGTG+GGG | + | 51891:23788-23807 | MS.gene96480:intron | 55.0% | |
| TATCCACCCTCTCAGCTCAC+CGG | + | 51891:20642-20661 | MS.gene96480:CDS | 55.0% | |
| TGGGGTCATAGGCTTGCCTA+TGG | + | 51891:22826-22845 | MS.gene96480:intron | 55.0% | |
| TGTGTCAGCATGCCAGTGTC+CGG | - | 51891:21170-21189 | MS.gene96480:intergenic | 55.0% | |
| ! | CCACCTGAAATCACCGACTG+CGG | + | 51891:20748-20767 | MS.gene96480:CDS | 55.0% |
| ! | GAGACTTGCTTGCACTGCCT+TGG | + | 51891:22449-22468 | MS.gene96480:CDS | 55.0% |
| ACGGGGACACGCCTAATTCG+AGG | + | 51891:21251-21270 | MS.gene96480:intron | 60.0% | |
| AGCCAAAACGCCGGACACTC+CGG | - | 51891:20664-20683 | MS.gene96480:intergenic | 60.0% | |
| AGCTGCAGTTGGGGTCGCAA+AGG | + | 51891:22126-22145 | MS.gene96480:intron | 60.0% | |
| AGGAGCAGAGAGGAGAGTGG+GGG | + | 51891:23789-23808 | MS.gene96480:intron | 60.0% | |
| AGTGTCACGTGTCCGACACG+GGG | + | 51891:21234-21253 | MS.gene96480:intron | 60.0% | |
| AGTTTACGCCTCGCCGCAGT+CGG | - | 51891:20764-20783 | MS.gene96480:intergenic | 60.0% | |
| CCGCAGTCGGTGATTTCAGG+TGG | - | 51891:20751-20770 | MS.gene96480:intergenic | 60.0% | |
| GACACTCCGGTGAGCTGAGA+GGG | - | 51891:20651-20670 | MS.gene96480:intergenic | 60.0% | |
| GCTAGCGTCGCAGTTGCATG+TGG | + | 51891:21908-21927 | MS.gene96480:intron | 60.0% | |
| TCGCCGCAGTCGGTGATTTC+AGG | - | 51891:20754-20773 | MS.gene96480:intergenic | 60.0% | |
| ! | TCTCAGCTCACCGGAGTGTC+CGG | + | 51891:20651-20670 | MS.gene96480:CDS | 60.0% |
| ! | TGAAATCACCGACTGCGGCG+AGG | + | 51891:20753-20772 | MS.gene96480:CDS | 60.0% |
| !! | AGGTGGGGCCTTGTTGAAGG+TGG | + | 51891:24014-24033 | MS.gene96480:CDS | 60.0% |
| !! | GACAGGTGGGGCCTTGTTGA+AGG | + | 51891:24011-24030 | MS.gene96480:CDS | 60.0% |
| ACTCCGGTGAGCTGAGAGGG+TGG | - | 51891:20648-20667 | MS.gene96480:intergenic | 65.0% | |
| GGACACTCCGGTGAGCTGAG+AGG | - | 51891:20652-20671 | MS.gene96480:intergenic | 65.0% | |
| !! | CACCGGAGTGTCCGGCGTTT+TGG | + | 51891:20659-20678 | MS.gene96480:CDS | 65.0% |
| !!! | TGTCCGGCGTTTTGGCTCCG+CGG | + | 51891:20667-20686 | MS.gene96480:CDS | 65.0% |
| ACTGCGACGCTAGCCCCTCG+AGG | - | 51891:21902-21921 | MS.gene96480:intergenic | 70.0% | |
| CCGCCGCGGAGCCAAAACGC+CGG | - | 51891:20673-20692 | MS.gene96480:intergenic | 75.0% | |
| !!! | CCGGCGTTTTGGCTCCGCGG+CGG | + | 51891:20670-20689 | MS.gene96480:CDS | 75.0% |
| !!! | GCGTTTTGGCTCCGCGGCGG+CGG | + | 51891:20673-20692 | MS.gene96480:CDS | 75.0% |
| ! | CTCCTCGTCGGCCGCCGCCG+CGG | - | 51891:20687-20706 | MS.gene96480:intergenic | 85.0% |
| ! | CTCCGCGGCGGCGGCCGACG+AGG | + | 51891:20682-20701 | MS.gene96480:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51891 | gene | 20590 | 24064 | 20590 | ID=MS.gene96480 |
| 51891 | mRNA | 20590 | 24064 | 20590 | ID=MS.gene96480.t1;Parent=MS.gene96480 |
| 51891 | exon | 20590 | 20994 | 20590 | ID=MS.gene96480.t1.exon1;Parent=MS.gene96480.t1 |
| 51891 | CDS | 20590 | 20994 | 20590 | ID=cds.MS.gene96480.t1;Parent=MS.gene96480.t1 |
| 51891 | exon | 22411 | 22585 | 22411 | ID=MS.gene96480.t1.exon2;Parent=MS.gene96480.t1 |
| 51891 | CDS | 22411 | 22585 | 22411 | ID=cds.MS.gene96480.t1;Parent=MS.gene96480.t1 |
| 51891 | exon | 23288 | 23565 | 23288 | ID=MS.gene96480.t1.exon3;Parent=MS.gene96480.t1 |
| 51891 | CDS | 23288 | 23565 | 23288 | ID=cds.MS.gene96480.t1;Parent=MS.gene96480.t1 |
| 51891 | exon | 24008 | 24064 | 24008 | ID=MS.gene96480.t1.exon4;Parent=MS.gene96480.t1 |
| 51891 | CDS | 24008 | 24064 | 24008 | ID=cds.MS.gene96480.t1;Parent=MS.gene96480.t1 |
| Gene Sequence |
| Protein sequence |
