Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90723.t1 | XP_003590123.1 | 100 | 239 | 0 | 0 | 1 | 239 | 1 | 239 | 1.40E-126 | 462.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90723.t1 | Q9FJA6 | 88.8 | 233 | 26 | 0 | 1 | 233 | 1 | 233 | 1.3e-112 | 407.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90723.t1 | B7FH64 | 100.0 | 239 | 0 | 0 | 1 | 239 | 1 | 239 | 1.0e-126 | 462.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050252 | MS.gene90723 | 0.820804 | 5.65E-53 | -1.69E-46 |
| MS.gene050290 | MS.gene90723 | 0.805238 | 1.47E-49 | -1.69E-46 |
| MS.gene051904 | MS.gene90723 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene054937 | MS.gene90723 | 0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene056917 | MS.gene90723 | 0.812661 | 3.79E-51 | -1.69E-46 |
| MS.gene057052 | MS.gene90723 | 0.80801 | 3.82E-50 | -1.69E-46 |
| MS.gene057092 | MS.gene90723 | 0.812627 | 3.86E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90723 | MS.gene98229 | PPI |
| MS.gene061619 | MS.gene90723 | PPI |
| MS.gene90723 | MS.gene98228 | PPI |
| MS.gene63685 | MS.gene90723 | PPI |
| MS.gene90723 | MS.gene08126 | PPI |
| MS.gene90723 | MS.gene053439 | PPI |
| MS.gene90723 | MS.gene31853 | PPI |
| MS.gene90723 | MS.gene055646 | PPI |
| MS.gene90723 | MS.gene063717 | PPI |
| MS.gene41083 | MS.gene90723 | PPI |
| MS.gene27003 | MS.gene90723 | PPI |
| MS.gene93153 | MS.gene90723 | PPI |
| MS.gene90723 | MS.gene33653 | PPI |
| MS.gene41081 | MS.gene90723 | PPI |
| MS.gene90723 | MS.gene96480 | PPI |
| MS.gene034801 | MS.gene90723 | PPI |
| MS.gene20081 | MS.gene90723 | PPI |
| MS.gene055644 | MS.gene90723 | PPI |
| MS.gene90723 | MS.gene27265 | PPI |
| MS.gene24232 | MS.gene90723 | PPI |
| MS.gene36891 | MS.gene90723 | PPI |
| MS.gene073885 | MS.gene90723 | PPI |
| MS.gene026677 | MS.gene90723 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90723.t1 | MTR_1g044660 | 100.000 | 239 | 0 | 0 | 1 | 239 | 1 | 239 | 3.63e-177 | 486 |
| MS.gene90723.t1 | MTR_1g023000 | 99.163 | 239 | 2 | 0 | 1 | 239 | 1 | 239 | 2.37e-176 | 484 |
| MS.gene90723.t1 | MTR_6g052140 | 94.538 | 238 | 8 | 1 | 1 | 238 | 1 | 233 | 6.51e-166 | 457 |
| MS.gene90723.t1 | MTR_6g052220 | 94.538 | 238 | 8 | 1 | 1 | 238 | 1 | 233 | 6.51e-166 | 457 |
| MS.gene90723.t1 | MTR_1g111450 | 86.383 | 235 | 31 | 1 | 1 | 234 | 1 | 235 | 5.09e-150 | 417 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90723.t1 | AT5G35530 | 88.841 | 233 | 26 | 0 | 1 | 233 | 1 | 233 | 2.03e-153 | 426 |
| MS.gene90723.t1 | AT2G31610 | 88.987 | 227 | 25 | 0 | 1 | 227 | 1 | 227 | 4.40e-149 | 416 |
| MS.gene90723.t1 | AT3G53870 | 92.166 | 217 | 17 | 0 | 1 | 217 | 1 | 217 | 1.47e-148 | 414 |
Find 66 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGGGTGTTCTTGGTATTA+AGG | 0.259759 | 1.4:+1593738 | MS.gene90723:intron |
| TTAGGACCTTGCTTTCCTTT+AGG | 0.279269 | 1.4:-1593784 | None:intergenic |
| GCTATTCCGGTGTTGAGGTT+AGG | 0.315077 | 1.4:+1593113 | MS.gene90723:CDS |
| CTTGCTGAAGATGGCTATTC+CGG | 0.326131 | 1.4:+1593100 | MS.gene90723:CDS |
| TCCCCTGTTGTTAACCTTCT+CGG | 0.326817 | 1.4:-1593375 | None:intergenic |
| CGGTGTGTTGAGGTTTGTTA+TGG | 0.332791 | 1.4:+1593472 | MS.gene90723:CDS |
| AAACCTCAACACACCGTAAC+AGG | 0.355716 | 1.4:-1593465 | None:intergenic |
| CTCATCTGGCCAACCTGTTA+AGG | 0.357556 | 1.4:+1593586 | MS.gene90723:CDS |
| ATGTACTCTTCCTCCTCCTT+TGG | 0.368666 | 1.4:-1593841 | None:intergenic |
| GTAGCCATCCTTGAACTTCA+TGG | 0.370346 | 1.4:-1593558 | None:intergenic |
| CTATTCCGGTGTTGAGGTTA+GGG | 0.371348 | 1.4:+1593114 | MS.gene90723:CDS |
| GGATGTGAGGTTATTGTTAG+TGG | 0.386156 | 1.4:+1593509 | MS.gene90723:CDS |
| GAGTCAATGTAATCCTTAAC+AGG | 0.402767 | 1.4:-1593599 | None:intergenic |
| CTCCTCCTTTGGAGTGTGAA+TGG | 0.408543 | 1.4:-1593830 | None:intergenic |
| ATCCTTGAACTTCATGGACT+TGG | 0.424680 | 1.4:-1593552 | None:intergenic |
| GTGTGAATGGTAACAATATC+AGG | 0.428011 | 1.4:-1593817 | None:intergenic |
| AGGTGAAGATTATGCTTGAC+TGG | 0.432560 | 1.4:+1593758 | MS.gene90723:CDS |
| ACCAGAGAGCTTGCTGAAGA+TGG | 0.438488 | 1.4:+1593091 | MS.gene90723:CDS |
| ACTCGTACCCAAGCTGTTCT+CGG | 0.438888 | 1.4:+1593172 | MS.gene90723:CDS |
| TCTCTTCGTTACAAGCTTCT+CGG | 0.453319 | 1.4:+1593422 | MS.gene90723:CDS |
| ATGCCGAGAAGGTTAACAAC+AGG | 0.456910 | 1.4:+1593372 | MS.gene90723:CDS |
| CAAACAACAGGGACTGGGAC+AGG | 0.457728 | 1.4:-1593901 | None:intergenic |
| AGGAGGAGGAAGAGTACATC+AGG | 0.461009 | 1.4:+1593845 | MS.gene90723:CDS |
| GATGGCTACATGATCTCATC+TGG | 0.466529 | 1.4:+1593572 | MS.gene90723:CDS |
| TTGAGGTTTGTTATGGAAAG+TGG | 0.475116 | 1.4:+1593479 | MS.gene90723:CDS |
| GATTAGGTGAGAAGGGAAGG+AGG | 0.484267 | 1.4:+1593285 | MS.gene90723:intron |
| TATAGTTCAACACTGTTCTC+AGG | 0.488325 | 1.4:-1593350 | None:intergenic |
| GCCATCTTCAGCAAGCTCTC+TGG | 0.491889 | 1.4:-1593092 | None:intergenic |
| AGCCAAGTCCATGAAGTTCA+AGG | 0.492737 | 1.4:+1593550 | MS.gene90723:CDS |
| AATTAATGATTAGGTGAGAA+GGG | 0.493314 | 1.4:+1593278 | MS.gene90723:intron |
| TGTTATGGAAAGTGGTGCTA+AGG | 0.499768 | 1.4:+1593487 | MS.gene90723:CDS |
| TAGACATGTTCTTCTCAGAC+AGG | 0.500852 | 1.4:+1593628 | MS.gene90723:CDS |
| TTGTTGCAGTTCGTCGCTGA+CGG | 0.501712 | 1.4:+1593037 | MS.gene90723:intron |
| AATGATTAGGTGAGAAGGGA+AGG | 0.513264 | 1.4:+1593282 | MS.gene90723:intron |
| TGACCTCAGTAGTCCAGAAA+AGG | 0.517945 | 1.4:+1593318 | MS.gene90723:CDS |
| CTACGAACCGAGAACAGCTT+GGG | 0.520711 | 1.4:-1593179 | None:intergenic |
| GATGATGATCTCAGTGCGCA+TGG | 0.527229 | 1.4:-1593143 | None:intergenic |
| TCATTTGCAACAACAGCAGC+AGG | 0.528096 | 1.4:-1593868 | None:intergenic |
| TTTCTTCGCTGAATTGAATG+AGG | 0.530015 | 1.4:+1593063 | MS.gene90723:CDS |
| AATGGTAACAATATCAGGTA+GGG | 0.532486 | 1.4:-1593812 | None:intergenic |
| ACTACGAACCGAGAACAGCT+TGG | 0.552773 | 1.4:-1593180 | None:intergenic |
| GAGCCTGTTACGGTGTGTTG+AGG | 0.556363 | 1.4:+1593462 | MS.gene90723:CDS |
| ATGCTTGACTGGGATCCTAA+AGG | 0.556783 | 1.4:+1593769 | MS.gene90723:CDS |
| TGTTGTTGCAAATGATATTG+AGG | 0.562213 | 1.4:+1593876 | MS.gene90723:CDS |
| TTTCTCAAACAACAGGGACT+GGG | 0.568525 | 1.4:-1593906 | None:intergenic |
| GTTATGGAAAGTGGTGCTAA+GGG | 0.582081 | 1.4:+1593488 | MS.gene90723:CDS |
| GAATGGTAACAATATCAGGT+AGG | 0.585408 | 1.4:-1593813 | None:intergenic |
| AGATGGCTATTCCGGTGTTG+AGG | 0.587442 | 1.4:+1593108 | MS.gene90723:CDS |
| GAATTAATGATTAGGTGAGA+AGG | 0.589593 | 1.4:+1593277 | MS.gene90723:intron |
| GCTGTACGCAGAGCCTGTTA+CGG | 0.590235 | 1.4:+1593452 | MS.gene90723:CDS |
| CAATGTAATCCTTAACAGGT+TGG | 0.596885 | 1.4:-1593595 | None:intergenic |
| TGGGATCCTAAAGGAAAGCA+AGG | 0.601952 | 1.4:+1593778 | MS.gene90723:CDS |
| GGTGAAGATTATGCTTGACT+GGG | 0.603451 | 1.4:+1593759 | MS.gene90723:CDS |
| AAACAACAGGGACTGGGACA+GGG | 0.607283 | 1.4:-1593900 | None:intergenic |
| TGTTGAACTATATGCCGAGA+AGG | 0.615665 | 1.4:+1593361 | MS.gene90723:CDS |
| TACCATTCACACTCCAAAGG+AGG | 0.618529 | 1.4:+1593828 | MS.gene90723:CDS |
| CATTCACACTCCAAAGGAGG+AGG | 0.623248 | 1.4:+1593831 | MS.gene90723:CDS |
| ATGGTAACAATATCAGGTAG+GGG | 0.623679 | 1.4:-1593811 | None:intergenic |
| TGTTACCATTCACACTCCAA+AGG | 0.627045 | 1.4:+1593825 | MS.gene90723:CDS |
| AAGTCCATGAAGTTCAAGGA+TGG | 0.640546 | 1.4:+1593554 | MS.gene90723:CDS |
| ATGATGATCTCAGTGCGCAT+GGG | 0.667262 | 1.4:-1593142 | None:intergenic |
| AAGTGGTGCTAAGGGATGTG+AGG | 0.670962 | 1.4:+1593496 | MS.gene90723:CDS |
| CTTCGTTACAAGCTTCTCGG+AGG | 0.671532 | 1.4:+1593425 | MS.gene90723:CDS |
| TGCCGAGAAGGTTAACAACA+GGG | 0.674234 | 1.4:+1593373 | MS.gene90723:CDS |
| AGTAACCCTAACCTCAACAC+CGG | 0.681090 | 1.4:-1593119 | None:intergenic |
| GCCGAGAAGGTTAACAACAG+GGG | 0.682645 | 1.4:+1593374 | MS.gene90723:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTATATGAATTTAAA+TGG | + | chr1.4:1593239-1593258 | MS.gene90723:intron | 10.0% |
| !! | TGATTTATGAATTAATGATT+AGG | + | chr1.4:1593269-1593288 | MS.gene90723:intron | 15.0% |
| !!! | ATTATTACCTTTATTTTGTA+GGG | + | chr1.4:1593721-1593740 | MS.gene90723:intron | 15.0% |
| !!! | GATTATTACCTTTATTTTGT+AGG | + | chr1.4:1593720-1593739 | MS.gene90723:intron | 20.0% |
| ! | AATTAATGATTAGGTGAGAA+GGG | + | chr1.4:1593278-1593297 | MS.gene90723:intron | 25.0% |
| AAACCAACAAGGTTGTTATA+GGG | - | chr1.4:1593666-1593685 | None:intergenic | 30.0% | |
| AAGAACACCCTACAAAATAA+AGG | - | chr1.4:1593731-1593750 | None:intergenic | 30.0% | |
| AATAACAAACCAAACCAACA+AGG | - | chr1.4:1593677-1593696 | None:intergenic | 30.0% | |
| AATGGTAACAATATCAGGTA+GGG | - | chr1.4:1593815-1593834 | None:intergenic | 30.0% | |
| CACTACTAATAGAGATGAAT+TGG | - | chr1.4:1592976-1592995 | None:intergenic | 30.0% | |
| GAATTAATGATTAGGTGAGA+AGG | + | chr1.4:1593277-1593296 | MS.gene90723:intron | 30.0% | |
| TGTTGTTGCAAATGATATTG+AGG | + | chr1.4:1593876-1593895 | MS.gene90723:CDS | 30.0% | |
| !!! | TTTATTTTGTAGGGTGTTCT+TGG | + | chr1.4:1593730-1593749 | MS.gene90723:intron | 30.0% |
| ATGGTAACAATATCAGGTAG+GGG | - | chr1.4:1593814-1593833 | None:intergenic | 35.0% | |
| CAAACCAACAAGGTTGTTAT+AGG | - | chr1.4:1593667-1593686 | None:intergenic | 35.0% | |
| CAATGTAATCCTTAACAGGT+TGG | - | chr1.4:1593598-1593617 | None:intergenic | 35.0% | |
| GAATGGTAACAATATCAGGT+AGG | - | chr1.4:1593816-1593835 | None:intergenic | 35.0% | |
| GAGTCAATGTAATCCTTAAC+AGG | - | chr1.4:1593602-1593621 | None:intergenic | 35.0% | |
| GTGTGAATGGTAACAATATC+AGG | - | chr1.4:1593820-1593839 | None:intergenic | 35.0% | |
| TATAGTTCAACACTGTTCTC+AGG | - | chr1.4:1593353-1593372 | None:intergenic | 35.0% | |
| TTACCCTATAACAACCTTGT+TGG | + | chr1.4:1593660-1593679 | MS.gene90723:intron | 35.0% | |
| TTTCTTCGCTGAATTGAATG+AGG | + | chr1.4:1593063-1593082 | MS.gene90723:CDS | 35.0% | |
| ! | CAGGAAACTTAAACCTTTTC+TGG | - | chr1.4:1593334-1593353 | None:intergenic | 35.0% |
| ! | CTATAACAACCTTGTTGGTT+TGG | + | chr1.4:1593665-1593684 | MS.gene90723:intron | 35.0% |
| !! | TTGAGGTTTGTTATGGAAAG+TGG | + | chr1.4:1593479-1593498 | MS.gene90723:CDS | 35.0% |
| !!! | CTTTCGCTTTTTGCTCATTT+GGG | - | chr1.4:1592925-1592944 | None:intergenic | 35.0% |
| AAGTCCATGAAGTTCAAGGA+TGG | + | chr1.4:1593554-1593573 | MS.gene90723:CDS | 40.0% | |
| AATGATTAGGTGAGAAGGGA+AGG | + | chr1.4:1593282-1593301 | MS.gene90723:intron | 40.0% | |
| AGGTGAAGATTATGCTTGAC+TGG | + | chr1.4:1593758-1593777 | MS.gene90723:CDS | 40.0% | |
| ATCCTTGAACTTCATGGACT+TGG | - | chr1.4:1593555-1593574 | None:intergenic | 40.0% | |
| CCAAATGAGCAAAAAGCGAA+AGG | + | chr1.4:1592923-1592942 | MS.gene90723:CDS | 40.0% | |
| GGATGTGAGGTTATTGTTAG+TGG | + | chr1.4:1593509-1593528 | MS.gene90723:CDS | 40.0% | |
| GGTGAAGATTATGCTTGACT+GGG | + | chr1.4:1593759-1593778 | MS.gene90723:CDS | 40.0% | |
| TAGACATGTTCTTCTCAGAC+AGG | + | chr1.4:1593628-1593647 | MS.gene90723:CDS | 40.0% | |
| TCTCTTCGTTACAAGCTTCT+CGG | + | chr1.4:1593422-1593441 | MS.gene90723:CDS | 40.0% | |
| TGTTACCATTCACACTCCAA+AGG | + | chr1.4:1593825-1593844 | MS.gene90723:CDS | 40.0% | |
| TGTTGAACTATATGCCGAGA+AGG | + | chr1.4:1593361-1593380 | MS.gene90723:CDS | 40.0% | |
| TTAGGACCTTGCTTTCCTTT+AGG | - | chr1.4:1593787-1593806 | None:intergenic | 40.0% | |
| ! | AAACCTTTTCTGGACTACTG+AGG | - | chr1.4:1593324-1593343 | None:intergenic | 40.0% |
| ! | ATATCAGGTAGGGGAGTTTT+AGG | - | chr1.4:1593805-1593824 | None:intergenic | 40.0% |
| ! | GTAGGGTGTTCTTGGTATTA+AGG | + | chr1.4:1593738-1593757 | MS.gene90723:intron | 40.0% |
| ! | GTTATGGAAAGTGGTGCTAA+GGG | + | chr1.4:1593488-1593507 | MS.gene90723:CDS | 40.0% |
| ! | TGTTATGGAAAGTGGTGCTA+AGG | + | chr1.4:1593487-1593506 | MS.gene90723:CDS | 40.0% |
| !!! | CCTTTCGCTTTTTGCTCATT+TGG | - | chr1.4:1592926-1592945 | None:intergenic | 40.0% |
| AAACCTCAACACACCGTAAC+AGG | - | chr1.4:1593468-1593487 | None:intergenic | 45.0% | |
| AGCCAAGTCCATGAAGTTCA+AGG | + | chr1.4:1593550-1593569 | MS.gene90723:CDS | 45.0% | |
| AGTAACCCTAACCTCAACAC+CGG | - | chr1.4:1593122-1593141 | None:intergenic | 45.0% | |
| ATGATGATCTCAGTGCGCAT+GGG | - | chr1.4:1593145-1593164 | None:intergenic | 45.0% | |
| ATGCCGAGAAGGTTAACAAC+AGG | + | chr1.4:1593372-1593391 | MS.gene90723:CDS | 45.0% | |
| ATGCTTGACTGGGATCCTAA+AGG | + | chr1.4:1593769-1593788 | MS.gene90723:CDS | 45.0% | |
| ATGTACTCTTCCTCCTCCTT+TGG | - | chr1.4:1593844-1593863 | None:intergenic | 45.0% | |
| CTTGCTGAAGATGGCTATTC+CGG | + | chr1.4:1593100-1593119 | MS.gene90723:CDS | 45.0% | |
| GATGGCTACATGATCTCATC+TGG | + | chr1.4:1593572-1593591 | MS.gene90723:CDS | 45.0% | |
| GTAGCCATCCTTGAACTTCA+TGG | - | chr1.4:1593561-1593580 | None:intergenic | 45.0% | |
| TACCATTCACACTCCAAAGG+AGG | + | chr1.4:1593828-1593847 | MS.gene90723:CDS | 45.0% | |
| TCATTTGCAACAACAGCAGC+AGG | - | chr1.4:1593871-1593890 | None:intergenic | 45.0% | |
| TCCCCTGTTGTTAACCTTCT+CGG | - | chr1.4:1593378-1593397 | None:intergenic | 45.0% | |
| TGACCTCAGTAGTCCAGAAA+AGG | + | chr1.4:1593318-1593337 | MS.gene90723:CDS | 45.0% | |
| TGCCGAGAAGGTTAACAACA+GGG | + | chr1.4:1593373-1593392 | MS.gene90723:CDS | 45.0% | |
| TGGGATCCTAAAGGAAAGCA+AGG | + | chr1.4:1593778-1593797 | MS.gene90723:CDS | 45.0% | |
| ! | CTATTCCGGTGTTGAGGTTA+GGG | + | chr1.4:1593114-1593133 | MS.gene90723:CDS | 45.0% |
| !! | CGGTGTGTTGAGGTTTGTTA+TGG | + | chr1.4:1593472-1593491 | MS.gene90723:CDS | 45.0% |
| AAACAACAGGGACTGGGACA+GGG | - | chr1.4:1593903-1593922 | None:intergenic | 50.0% | |
| ACTACGAACCGAGAACAGCT+TGG | - | chr1.4:1593183-1593202 | None:intergenic | 50.0% | |
| ACTCGTACCCAAGCTGTTCT+CGG | + | chr1.4:1593172-1593191 | MS.gene90723:CDS | 50.0% | |
| CATTCACACTCCAAAGGAGG+AGG | + | chr1.4:1593831-1593850 | MS.gene90723:CDS | 50.0% | |
| CTACGAACCGAGAACAGCTT+GGG | - | chr1.4:1593182-1593201 | None:intergenic | 50.0% | |
| CTCATCTGGCCAACCTGTTA+AGG | + | chr1.4:1593586-1593605 | MS.gene90723:CDS | 50.0% | |
| CTTCGTTACAAGCTTCTCGG+AGG | + | chr1.4:1593425-1593444 | MS.gene90723:CDS | 50.0% | |
| GATGATGATCTCAGTGCGCA+TGG | - | chr1.4:1593146-1593165 | None:intergenic | 50.0% | |
| GATTAGGTGAGAAGGGAAGG+AGG | + | chr1.4:1593285-1593304 | MS.gene90723:intron | 50.0% | |
| GCCGAGAAGGTTAACAACAG+GGG | + | chr1.4:1593374-1593393 | MS.gene90723:CDS | 50.0% | |
| TTGTTGCAGTTCGTCGCTGA+CGG | + | chr1.4:1593037-1593056 | MS.gene90723:intron | 50.0% | |
| ! | AAGTGGTGCTAAGGGATGTG+AGG | + | chr1.4:1593496-1593515 | MS.gene90723:CDS | 50.0% |
| ! | AGATGGCTATTCCGGTGTTG+AGG | + | chr1.4:1593108-1593127 | MS.gene90723:CDS | 50.0% |
| ! | AGGAGGAGGAAGAGTACATC+AGG | + | chr1.4:1593845-1593864 | MS.gene90723:CDS | 50.0% |
| ! | GCTATTCCGGTGTTGAGGTT+AGG | + | chr1.4:1593113-1593132 | MS.gene90723:CDS | 50.0% |
| !! | ACCAGAGAGCTTGCTGAAGA+TGG | + | chr1.4:1593091-1593110 | MS.gene90723:CDS | 50.0% |
| !! | CTCCTCCTTTGGAGTGTGAA+TGG | - | chr1.4:1593833-1593852 | None:intergenic | 50.0% |
| CAAACAACAGGGACTGGGAC+AGG | - | chr1.4:1593904-1593923 | None:intergenic | 55.0% | |
| GAGCCTGTTACGGTGTGTTG+AGG | + | chr1.4:1593462-1593481 | MS.gene90723:CDS | 55.0% | |
| GCCATCTTCAGCAAGCTCTC+TGG | - | chr1.4:1593095-1593114 | None:intergenic | 55.0% | |
| GCTGTACGCAGAGCCTGTTA+CGG | + | chr1.4:1593452-1593471 | MS.gene90723:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 1592915 | 1593924 | 1592915 | ID=MS.gene90723 |
| chr1.4 | mRNA | 1592915 | 1593924 | 1592915 | ID=MS.gene90723.t1;Parent=MS.gene90723 |
| chr1.4 | exon | 1592915 | 1592944 | 1592915 | ID=MS.gene90723.t1.exon1;Parent=MS.gene90723.t1 |
| chr1.4 | CDS | 1592915 | 1592944 | 1592915 | ID=cds.MS.gene90723.t1;Parent=MS.gene90723.t1 |
| chr1.4 | exon | 1593046 | 1593193 | 1593046 | ID=MS.gene90723.t1.exon2;Parent=MS.gene90723.t1 |
| chr1.4 | CDS | 1593046 | 1593193 | 1593046 | ID=cds.MS.gene90723.t1;Parent=MS.gene90723.t1 |
| chr1.4 | exon | 1593291 | 1593649 | 1593291 | ID=MS.gene90723.t1.exon3;Parent=MS.gene90723.t1 |
| chr1.4 | CDS | 1593291 | 1593649 | 1593291 | ID=cds.MS.gene90723.t1;Parent=MS.gene90723.t1 |
| chr1.4 | exon | 1593742 | 1593924 | 1593742 | ID=MS.gene90723.t1.exon4;Parent=MS.gene90723.t1 |
| chr1.4 | CDS | 1593742 | 1593924 | 1593742 | ID=cds.MS.gene90723.t1;Parent=MS.gene90723.t1 |
| Gene Sequence |
| Protein sequence |
