Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36891.t1 | TEY55217.1 | 69.2 | 351 | 40 | 3 | 1 | 351 | 138 | 420 | 1.90E-114 | 422.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36891.t1 | Q9FJA6 | 89.4 | 216 | 23 | 0 | 1 | 216 | 11 | 226 | 4.4e-104 | 379.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36891.t1 | A0A4D9A6X3 | 69.2 | 351 | 40 | 3 | 1 | 351 | 138 | 420 | 1.3e-114 | 422.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36891 | MS.gene24232 | PPI |
| MS.gene36891 | MS.gene33653 | PPI |
| MS.gene36891 | MS.gene073885 | PPI |
| MS.gene63685 | MS.gene36891 | PPI |
| MS.gene36891 | MS.gene96480 | PPI |
| MS.gene36891 | MS.gene026677 | PPI |
| MS.gene36891 | MS.gene27265 | PPI |
| MS.gene36891 | MS.gene41083 | PPI |
| MS.gene41081 | MS.gene36891 | PPI |
| MS.gene36891 | MS.gene061619 | PPI |
| MS.gene034801 | MS.gene36891 | PPI |
| MS.gene36891 | MS.gene93153 | PPI |
| MS.gene36891 | MS.gene98228 | PPI |
| MS.gene20081 | MS.gene36891 | PPI |
| MS.gene36891 | MS.gene27003 | PPI |
| MS.gene36891 | MS.gene08126 | PPI |
| MS.gene055644 | MS.gene36891 | PPI |
| MS.gene36891 | MS.gene90723 | PPI |
| MS.gene36891 | MS.gene053439 | PPI |
| MS.gene36891 | MS.gene31853 | PPI |
| MS.gene36891 | MS.gene98229 | PPI |
| MS.gene36891 | MS.gene055646 | PPI |
| MS.gene073885 | MS.gene36891 | PPI |
| MS.gene36891 | MS.gene063717 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36891.t1 | MTR_1g044660 | 98.643 | 221 | 3 | 0 | 1 | 221 | 11 | 231 | 9.06e-160 | 447 |
| MS.gene36891.t1 | MTR_1g044660 | 66.667 | 63 | 19 | 1 | 291 | 353 | 16 | 76 | 1.60e-16 | 78.6 |
| MS.gene36891.t1 | MTR_1g023000 | 98.190 | 221 | 4 | 0 | 1 | 221 | 11 | 231 | 2.45e-159 | 446 |
| MS.gene36891.t1 | MTR_1g023000 | 66.667 | 63 | 19 | 1 | 291 | 353 | 16 | 76 | 1.35e-16 | 78.6 |
| MS.gene36891.t1 | MTR_6g052140 | 95.853 | 217 | 9 | 0 | 1 | 217 | 11 | 227 | 1.76e-152 | 428 |
| MS.gene36891.t1 | MTR_6g052140 | 65.079 | 63 | 20 | 1 | 291 | 353 | 16 | 76 | 3.24e-16 | 77.4 |
| MS.gene36891.t1 | MTR_6g052220 | 95.853 | 217 | 9 | 0 | 1 | 217 | 11 | 227 | 1.76e-152 | 428 |
| MS.gene36891.t1 | MTR_6g052220 | 65.079 | 63 | 20 | 1 | 291 | 353 | 16 | 76 | 3.24e-16 | 77.4 |
| MS.gene36891.t1 | MTR_1g111450 | 86.512 | 215 | 29 | 0 | 2 | 216 | 12 | 226 | 7.91e-136 | 386 |
| MS.gene36891.t1 | MTR_1g111450 | 57.627 | 59 | 23 | 1 | 296 | 352 | 17 | 75 | 4.54e-11 | 62.8 |
| MS.gene36891.t1 | MTR_5g088060 | 86.207 | 58 | 8 | 0 | 221 | 278 | 222 | 279 | 6.84e-26 | 108 |
| MS.gene36891.t1 | MTR_5g488160 | 86.207 | 58 | 8 | 0 | 221 | 278 | 222 | 279 | 6.84e-26 | 108 |
| MS.gene36891.t1 | MTR_5g088010 | 80.952 | 63 | 7 | 2 | 221 | 278 | 5 | 67 | 7.00e-25 | 101 |
| MS.gene36891.t1 | MTR_5g027570 | 51.471 | 68 | 23 | 2 | 221 | 278 | 32 | 99 | 2.06e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36891.t1 | AT5G35530 | 88.532 | 218 | 25 | 0 | 1 | 218 | 11 | 228 | 4.24e-142 | 402 |
| MS.gene36891.t1 | AT5G35530 | 58.824 | 68 | 26 | 1 | 286 | 353 | 11 | 76 | 3.43e-15 | 74.7 |
| MS.gene36891.t1 | AT2G31610 | 87.558 | 217 | 27 | 0 | 1 | 217 | 11 | 227 | 1.78e-138 | 394 |
| MS.gene36891.t1 | AT2G31610 | 58.824 | 68 | 26 | 1 | 286 | 353 | 11 | 76 | 3.06e-15 | 75.1 |
| MS.gene36891.t1 | AT3G53870 | 91.304 | 207 | 18 | 0 | 1 | 207 | 11 | 217 | 2.63e-138 | 393 |
| MS.gene36891.t1 | AT3G53870 | 63.492 | 63 | 21 | 1 | 291 | 353 | 16 | 76 | 4.61e-15 | 74.3 |
Find 0 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTAATTAATAACAACA+AGG | + | 57520:24074-24093 | MS.gene36891:intergenic | 10.0% |
| !! | CTCAAAATAAATAAAAAAAT+TGG | + | 57520:24833-24852 | MS.gene36891:intergenic | 10.0% |
| !!! | ATTTATTTTTGTTTCATTTT+GGG | - | 57520:24745-24764 | MS.gene36891:intron | 10.0% |
| !!! | ATTTATTTTTTGACTTATTA+AGG | - | 57520:23951-23970 | MS.gene36891:intron | 10.0% |
| !!! | TATTTATTTTTGTTTCATTT+TGG | - | 57520:24744-24763 | MS.gene36891:intron | 10.0% |
| !!! | TATTTTTATTAATTGATTGA+AGG | - | 57520:23739-23758 | MS.gene36891:intron | 10.0% |
| !! | AAATATTTCAAAAGAATTTG+TGG | - | 57520:23116-23135 | MS.gene36891:intron | 15.0% |
| !! | ACAAAATTGAAAAATAACTA+CGG | + | 57520:23604-23623 | MS.gene36891:intergenic | 15.0% |
| !! | TGATTTATGAATTTATGATT+AGG | - | 57520:21383-21402 | MS.gene36891:intron | 15.0% |
| !!! | AATTATTTTGTGTTGTATTT+TGG | - | 57520:24874-24893 | MS.gene36891:CDS | 15.0% |
| !!! | AATTCTTATAGTTGTATTTT+TGG | - | 57520:22509-22528 | MS.gene36891:intron | 15.0% |
| !!! | ATTATTTTGTGTTGTATTTT+GGG | - | 57520:24875-24894 | MS.gene36891:CDS | 15.0% |
| !!! | TGATTTTTGTAACTTTTATT+TGG | - | 57520:23358-23377 | MS.gene36891:CDS | 15.0% |
| !!! | TGTATTTTATTTGGTATTTT+TGG | - | 57520:23394-23413 | MS.gene36891:CDS | 15.0% |
| !! | AAACAAACAAGGTAAAATTA+AGG | + | 57520:23879-23898 | MS.gene36891:intergenic | 20.0% |
| !! | AAATCAATGAAATTTAAGGA+CGG | - | 57520:21668-21687 | MS.gene36891:intron | 20.0% |
| !! | AATATTACACAAAATAACCA+CGG | + | 57520:23723-23742 | MS.gene36891:intergenic | 20.0% |
| !! | ACATTTAGTAAAAACAAACA+AGG | + | 57520:23890-23909 | MS.gene36891:intergenic | 20.0% |
| !! | ACTCATTTAAATCAATTTGA+AGG | + | 57520:22577-22596 | MS.gene36891:intergenic | 20.0% |
| !! | AGCTAAATCAATGAAATTTA+AGG | - | 57520:21664-21683 | MS.gene36891:intron | 20.0% |
| !! | ATCACTATACTAAAAAGTAA+AGG | + | 57520:24488-24507 | MS.gene36891:intergenic | 20.0% |
| !! | ATTATGATATCTTCTTGTTA+TGG | - | 57520:22269-22288 | MS.gene36891:intron | 20.0% |
| !! | ATTTAAATCAATTTGAAGGA+GGG | + | 57520:22573-22592 | MS.gene36891:intergenic | 20.0% |
| !! | CATTTGTTTAGTTATGAATA+TGG | - | 57520:22976-22995 | MS.gene36891:intron | 20.0% |
| !! | CTAAATATCTATAATCCATT+TGG | - | 57520:24372-24391 | MS.gene36891:intron | 20.0% |
| !! | GTATTATGATTTACTTATGT+TGG | - | 57520:24295-24314 | MS.gene36891:intron | 20.0% |
| !! | TAAAAATAACTCTCAAACAT+AGG | + | 57520:22848-22867 | MS.gene36891:intergenic | 20.0% |
| !! | TAAAGAAAATGAGTTGTTAT+AGG | - | 57520:23981-24000 | MS.gene36891:intron | 20.0% |
| !! | TAAATCATAATACCCAATAT+AGG | + | 57520:24288-24307 | MS.gene36891:intergenic | 20.0% |
| !! | TAATTCAAATTGGATGAAAT+TGG | - | 57520:22481-22500 | MS.gene36891:intron | 20.0% |
| !! | TCACTATACTAAAAAGTAAA+GGG | + | 57520:24487-24506 | MS.gene36891:intergenic | 20.0% |
| !! | TGAAAGTTAAGAAAATTACT+TGG | + | 57520:22320-22339 | MS.gene36891:intergenic | 20.0% |
| !! | TTCAAAAAATATTATGCATG+TGG | - | 57520:22455-22474 | MS.gene36891:intron | 20.0% |
| !!! | AGGCATAATTGATTTAATTA+AGG | - | 57520:22363-22382 | MS.gene36891:intron | 20.0% |
| !!! | ATATATAGGTTGTTTTTGAA+GGG | - | 57520:23063-23082 | MS.gene36891:intron | 20.0% |
| !!! | ATGTTTTTCTTTCCTATATT+GGG | - | 57520:24273-24292 | MS.gene36891:intron | 20.0% |
| !!! | ATTATGTCATTTATGTTGTA+GGG | - | 57520:21835-21854 | MS.gene36891:intron | 20.0% |
| !!! | CATGCATAATATTTTTTGAA+TGG | + | 57520:22455-22474 | MS.gene36891:intergenic | 20.0% |
| !!! | GAAGTGTTATATGATTTATA+TGG | - | 57520:24148-24167 | MS.gene36891:CDS | 20.0% |
| !!! | GTTCACTAATGTATTTTATT+TGG | - | 57520:23385-23404 | MS.gene36891:CDS | 20.0% |
| !!! | TATATATAGGTTGTTTTTGA+AGG | - | 57520:23062-23081 | MS.gene36891:intron | 20.0% |
| !!! | TCAAATTGATTTAAATGAGT+CGG | - | 57520:22577-22596 | MS.gene36891:intron | 20.0% |
| !!! | TTGTTTTTACTAAATGTGAA+TGG | - | 57520:23893-23912 | MS.gene36891:intron | 20.0% |
| !!! | TTTTTGACTTATTAAGGAAA+TGG | - | 57520:23957-23976 | MS.gene36891:intron | 20.0% |
| ! | AATCAATGAAATTTAAGGAC+GGG | - | 57520:21669-21688 | MS.gene36891:intron | 25.0% |
| ! | ACAGATAGATATCTATTCAA+TGG | + | 57520:23672-23691 | MS.gene36891:intergenic | 25.0% |
| ! | AGAATCTTTACTAAAAGTGA+TGG | - | 57520:23558-23577 | MS.gene36891:intron | 25.0% |
| ! | ATCATATAAAAGACAAGATC+AGG | + | 57520:22156-22175 | MS.gene36891:intergenic | 25.0% |
| ! | CACATTCATTCTCTATATAT+AGG | - | 57520:23049-23068 | MS.gene36891:intron | 25.0% |
| ! | CATGTGGATATAATTCAAAT+TGG | - | 57520:22471-22490 | MS.gene36891:intron | 25.0% |
| ! | CATTTAAATCAATTTGAAGG+AGG | + | 57520:22574-22593 | MS.gene36891:intergenic | 25.0% |
| ! | TATTGTCAGTGTAAAATTGA+GGG | - | 57520:21634-21653 | MS.gene36891:intron | 25.0% |
| ! | TTATTGTCAGTGTAAAATTG+AGG | - | 57520:21633-21652 | MS.gene36891:intron | 25.0% |
| !! | ATTAGAGTTTAGAATTGCAA+CGG | + | 57520:22684-22703 | MS.gene36891:intergenic | 25.0% |
| !! | CATGTTTTTCTTTCCTATAT+TGG | - | 57520:24272-24291 | MS.gene36891:CDS | 25.0% |
| !! | GATTATGTCATTTATGTTGT+AGG | - | 57520:21834-21853 | MS.gene36891:intron | 25.0% |
| !! | TATAATCCATTTGGTCATTT+TGG | - | 57520:24381-24400 | MS.gene36891:intron | 25.0% |
| !! | TTTCCATATCTTTCACATTT+TGG | + | 57520:23194-23213 | MS.gene36891:intergenic | 25.0% |
| !!! | CTTTGAATTTTAACTATCGT+TGG | - | 57520:24695-24714 | MS.gene36891:CDS | 25.0% |
| !!! | TATATAGGTTGTTTTTGAAG+GGG | - | 57520:23064-23083 | MS.gene36891:intron | 25.0% |
| !!! | TATTTTTGGTATAGAAAGCA+TGG | - | 57520:22523-22542 | MS.gene36891:intron | 25.0% |
| !!! | TTGGTGGTTAAAGTATTTTT+GGG | + | 57520:23175-23194 | MS.gene36891:intergenic | 25.0% |
| !!! | TTTGGTGGTTAAAGTATTTT+TGG | + | 57520:23176-23195 | MS.gene36891:intergenic | 25.0% |
| AAGTTTCCAAAATGACCAAA+TGG | + | 57520:24390-24409 | MS.gene36891:intergenic | 30.0% | |
| AATGGTAACAATATCAGGTA+GGG | + | 57520:21929-21948 | MS.gene36891:intergenic | 30.0% | |
| ACTTCTTCTGTTAATGATGT+TGG | + | 57520:24133-24152 | MS.gene36891:intergenic | 30.0% | |
| ATACCTACAATGAGTACAAT+AGG | + | 57520:24102-24121 | MS.gene36891:intergenic | 30.0% | |
| ATTGCATCAACTAACTAAGT+AGG | + | 57520:23487-23506 | MS.gene36891:intergenic | 30.0% | |
| CAAAACATTCTCAAACAACA+GGG | + | 57520:22029-22048 | MS.gene36891:intergenic | 30.0% | |
| CAAACGTCAAATTCTCAAAT+TGG | + | 57520:24186-24205 | MS.gene36891:intergenic | 30.0% | |
| CAATGTAGAGTTGAAATTGT+TGG | + | 57520:23295-23314 | MS.gene36891:intergenic | 30.0% | |
| CTTAAACAAGAATGACACAT+TGG | - | 57520:23251-23270 | MS.gene36891:intron | 30.0% | |
| GAATAGATATCTATCTGTGT+TGG | - | 57520:23674-23693 | MS.gene36891:intron | 30.0% | |
| TAACCTATTGTACTCATTGT+AGG | - | 57520:24096-24115 | MS.gene36891:intron | 30.0% | |
| TATGATTAGGTGAAAAGAGT+AGG | - | 57520:21396-21415 | MS.gene36891:intron | 30.0% | |
| TCAAAACATTCTCAAACAAC+AGG | + | 57520:22030-22049 | MS.gene36891:intergenic | 30.0% | |
| TGTGAAAGATATGGAAAAGA+AGG | - | 57520:23197-23216 | MS.gene36891:intron | 30.0% | |
| TTACTTTGATACCATTGAAG+TGG | - | 57520:22200-22219 | MS.gene36891:intron | 30.0% | |
| TTATGATCCAACAACCTTAT+TGG | - | 57520:21770-21789 | MS.gene36891:intron | 30.0% | |
| TTTCTTCACTGAATTGAATC+TGG | - | 57520:24540-24559 | MS.gene36891:CDS | 30.0% | |
| ! | CAATGTGTCATTCTTGTTTA+AGG | + | 57520:23253-23272 | MS.gene36891:intergenic | 30.0% |
| ! | CAGGAAACTTAAATCTTTTC+TGG | + | 57520:21448-21467 | MS.gene36891:intergenic | 30.0% |
| ! | TCTTGTTATGGTTCTGTAAT+TGG | - | 57520:22281-22300 | MS.gene36891:intron | 30.0% |
| ! | TTATTCTGGTGTTGAGTTTA+TGG | - | 57520:24597-24616 | MS.gene36891:CDS | 30.0% |
| ! | TTGTCTAGTTCATCTGATTA+AGG | - | 57520:22343-22362 | MS.gene36891:intron | 30.0% |
| ! | TTGTCTGACTTTGTAGTTTT+CGG | - | 57520:22087-22106 | MS.gene36891:intron | 30.0% |
| !! | ATTTGGTCATTTTGGAAACT+TGG | - | 57520:24389-24408 | MS.gene36891:CDS | 30.0% |
| !! | CTGTAATTGGTTTGAGTAAT+TGG | - | 57520:22294-22313 | MS.gene36891:intron | 30.0% |
| !! | TTAAGGTTTGTTATGGAAAG+TGG | - | 57520:21593-21612 | MS.gene36891:CDS | 30.0% |
| !! | TTCGTTCATATGGTTTGTTA+TGG | - | 57520:21796-21815 | MS.gene36891:intron | 30.0% |
| !! | TTTGGGTTTTTGTGATGTAT+AGG | - | 57520:24892-24911 | MS.gene36891:CDS | 30.0% |
| !!! | CATCATTTTTTGAGTAAACC+GGG | - | 57520:22386-22405 | MS.gene36891:intron | 30.0% |
| !!! | GCATCATTTTTTGAGTAAAC+CGG | - | 57520:22385-22404 | MS.gene36891:intron | 30.0% |
| !!! | TGAATTTTAACTATCGTTGG+TGG | - | 57520:24698-24717 | MS.gene36891:CDS | 30.0% |
| !!! | TGTTAGTCATTGACTTTTTC+CGG | - | 57520:23621-23640 | MS.gene36891:intron | 30.0% |
| AAAAGTGATGGTAGTAGTTC+TGG | - | 57520:23570-23589 | MS.gene36891:intron | 35.0% | |
| AAAATCTCACTAACTCACTC+AGG | - | 57520:23847-23866 | MS.gene36891:intron | 35.0% | |
| AGGTAAAGATTATGCTTGAC+TGG | - | 57520:21872-21891 | MS.gene36891:intron | 35.0% | |
| ATATGAACGAACGACCAATA+AGG | + | 57520:21787-21806 | MS.gene36891:intergenic | 35.0% | |
| ATGGTAACAATATCAGGTAG+GGG | + | 57520:21928-21947 | MS.gene36891:intergenic | 35.0% | |
| ATGTTCAATTGTCCTTCTCT+TGG | + | 57520:24432-24451 | MS.gene36891:intergenic | 35.0% | |
| CCACCAAAATGTGAAAGATA+TGG | - | 57520:23188-23207 | MS.gene36891:intron | 35.0% | |
| GAATGGTAACAATATCAGGT+AGG | + | 57520:21930-21949 | MS.gene36891:intergenic | 35.0% | |
| GAGTCAATGTAATCCTTAAC+AGG | + | 57520:21716-21735 | MS.gene36891:intergenic | 35.0% | |
| GCAACTAAAATCCACTTCAA+TGG | + | 57520:22214-22233 | MS.gene36891:intergenic | 35.0% | |
| GGGATGAAAAAACATGGAAA+GGG | - | 57520:23084-23103 | MS.gene36891:intron | 35.0% | |
| GGTAAAGATTATGCTTGACT+GGG | - | 57520:21873-21892 | MS.gene36891:intron | 35.0% | |
| GTGTGAATGGTAACAATATC+AGG | + | 57520:21934-21953 | MS.gene36891:intergenic | 35.0% | |
| TACTTAATGCCTAGTGGTTT+GGG | - | 57520:24243-24262 | MS.gene36891:CDS | 35.0% | |
| TAGACATGTTCTTCTTAGAC+AGG | - | 57520:21742-21761 | MS.gene36891:intron | 35.0% | |
| TATCTCATAAAGCCAAGAGA+AGG | - | 57520:24417-24436 | MS.gene36891:CDS | 35.0% | |
| TCATGATTTCAGTGTGCATT+CGG | + | 57520:24627-24646 | MS.gene36891:intergenic | 35.0% | |
| TCTCTTCTTTACAAGCTTCT+CGG | - | 57520:21536-21555 | MS.gene36891:CDS | 35.0% | |
| TGTTGAAATATACAAGTCCG+TGG | - | 57520:23703-23722 | MS.gene36891:intron | 35.0% | |
| TGTTGTTGCAAATGATATCG+AGG | - | 57520:21990-22009 | MS.gene36891:intron | 35.0% | |
| TTATTGGTCGTTCGTTCATA+TGG | - | 57520:21786-21805 | MS.gene36891:intron | 35.0% | |
| TTGAAGGGGATGAAAAAACA+TGG | - | 57520:23078-23097 | MS.gene36891:intron | 35.0% | |
| TTGTGATGTATAGGTGTGAT+GGG | - | 57520:24901-24920 | MS.gene36891:CDS | 35.0% | |
| TTTCAACTCTACATTGTTGC+TGG | - | 57520:23299-23318 | MS.gene36891:intron | 35.0% | |
| TTTCTTCGCTGAATTGAATG+AGG | - | 57520:21195-21214 | MS.gene36891:CDS | 35.0% | |
| TTTGTGATGTATAGGTGTGA+TGG | - | 57520:24900-24919 | MS.gene36891:CDS | 35.0% | |
| ! | AAATCTTTTCTGGACTACTG+AGG | + | 57520:21438-21457 | MS.gene36891:intergenic | 35.0% |
| ! | ATGCAATACTTTTGCAAGCA+TGG | - | 57520:23500-23519 | MS.gene36891:intron | 35.0% |
| ! | CCATATCTTTCACATTTTGG+TGG | + | 57520:23191-23210 | MS.gene36891:intergenic | 35.0% |
| ! | TTTATGTTGTAGGGTGTTCT+TGG | - | 57520:21844-21863 | MS.gene36891:intron | 35.0% |
| ! | TTTGGTATAGAAAGCATGGA+AGG | - | 57520:22527-22546 | MS.gene36891:intron | 35.0% |
| !!! | GGTTAAAGTATTTTTGGGCA+TGG | + | 57520:23170-23189 | MS.gene36891:intergenic | 35.0% |
| AAACCTTAAGACACCGTAAC+AGG | + | 57520:21582-21601 | MS.gene36891:intergenic | 40.0% | |
| AACACCAGAATAACCATCCT+CGG | + | 57520:24590-24609 | MS.gene36891:intergenic | 40.0% | |
| AAGATCAAGTGACCGATTGA+GGG | + | 57520:23798-23817 | MS.gene36891:intergenic | 40.0% | |
| AGTGAGATTGAGAGAGAGTT+CGG | + | 57520:23821-23840 | MS.gene36891:intergenic | 40.0% | |
| ATCACTTACCAAGAGCAACT+TGG | + | 57520:24666-24685 | MS.gene36891:intergenic | 40.0% | |
| ATGAATACACCCAAACCACT+AGG | + | 57520:24255-24274 | MS.gene36891:intergenic | 40.0% | |
| ATGATGATTTCAGTGCGCAT+GGG | + | 57520:21277-21296 | MS.gene36891:intergenic | 40.0% | |
| ATGCCGAGAAAGTTAACAAC+AGG | - | 57520:21486-21505 | MS.gene36891:CDS | 40.0% | |
| ATTCTCAAACAACAGGGACT+AGG | + | 57520:22023-22042 | MS.gene36891:intergenic | 40.0% | |
| CATGATTTCAGTGTGCATTC+GGG | + | 57520:24626-24645 | MS.gene36891:intergenic | 40.0% | |
| CATGGCGAAGAATATTGTTG+TGG | - | 57520:23518-23537 | MS.gene36891:intron | 40.0% | |
| CTACTTAATGCCTAGTGGTT+TGG | - | 57520:24242-24261 | MS.gene36891:CDS | 40.0% | |
| CTTGCTGAAGATGGATATTC+CGG | - | 57520:21232-21251 | MS.gene36891:intron | 40.0% | |
| GAACAACAACAGGAGAAAAC+TGG | - | 57520:22632-22651 | MS.gene36891:intron | 40.0% | |
| GATACTGTGTACCACTAACA+CGG | + | 57520:23650-23669 | MS.gene36891:intergenic | 40.0% | |
| GATTAGGTGAAAAGAGTAGG+AGG | - | 57520:21399-21418 | MS.gene36891:intron | 40.0% | |
| GCACACTGAAATCATGATCA+AGG | - | 57520:24630-24649 | MS.gene36891:CDS | 40.0% | |
| GGAAGATGTTATGCTAGAGA+AGG | + | 57520:24466-24485 | MS.gene36891:intergenic | 40.0% | |
| GGGGATGAAAAAACATGGAA+AGG | - | 57520:23083-23102 | MS.gene36891:intron | 40.0% | |
| GTAATCCTTAACAGGTTGTC+CGG | + | 57520:21708-21727 | MS.gene36891:intergenic | 40.0% | |
| GTTCAATGTTTAAGTCCCTG+TGG | - | 57520:22109-22128 | MS.gene36891:intron | 40.0% | |
| TACAGTTCAACACTGTTCTC+AGG | + | 57520:21467-21486 | MS.gene36891:intergenic | 40.0% | |
| TCACTTACCAAGAGCAACTT+GGG | + | 57520:24665-24684 | MS.gene36891:intergenic | 40.0% | |
| TCCCCTGTTGTTAACTTTCT+CGG | + | 57520:21492-21511 | MS.gene36891:intergenic | 40.0% | |
| TGCCGAGAAAGTTAACAACA+GGG | - | 57520:21487-21506 | MS.gene36891:CDS | 40.0% | |
| TGGCACAGATATCATTGAGT+CGG | - | 57520:22652-22671 | MS.gene36891:intron | 40.0% | |
| TGTTACCATTCACACTCCAA+AGG | - | 57520:21939-21958 | MS.gene36891:intron | 40.0% | |
| TGTTCCATGCTATGCTTAGA+GGG | + | 57520:22617-22636 | MS.gene36891:intergenic | 40.0% | |
| TTAGGACCTTGCTTTCCTTT+AGG | + | 57520:21901-21920 | MS.gene36891:intergenic | 40.0% | |
| TTGTTCCATGCTATGCTTAG+AGG | + | 57520:22618-22637 | MS.gene36891:intergenic | 40.0% | |
| ! | ATATCAGGTAGGGGAGTTTT+AGG | + | 57520:21919-21938 | MS.gene36891:intergenic | 40.0% |
| ! | ATATTCCGGTGTTGAGGTTA+GGG | - | 57520:21246-21265 | MS.gene36891:intron | 40.0% |
| ! | CACTGAATTGAATCTGGAGT+TGG | - | 57520:24546-24565 | MS.gene36891:CDS | 40.0% |
| ! | GTAGGGTGTTCTTGGTATTA+AGG | - | 57520:21852-21871 | MS.gene36891:intron | 40.0% |
| ! | GTTATGGAAAGTGGTGCTAA+GGG | - | 57520:21602-21621 | MS.gene36891:CDS | 40.0% |
| ! | GTTTGCTACTTAATGCCTAG+TGG | - | 57520:24237-24256 | MS.gene36891:CDS | 40.0% |
| ! | TGTTATGGAAAGTGGTGCTA+AGG | - | 57520:21601-21620 | MS.gene36891:CDS | 40.0% |
| ! | TTGATTGAAGGTTGATCTCC+CGG | - | 57520:23751-23770 | MS.gene36891:intron | 40.0% |
| !! | AATACCCAAAAAAGCACCAC+AGG | + | 57520:22128-22147 | MS.gene36891:intergenic | 40.0% |
| !! | ATACCCAAAAAAGCACCACA+GGG | + | 57520:22127-22146 | MS.gene36891:intergenic | 40.0% |
| !! | CGGTGTCTTAAGGTTTGTTA+TGG | - | 57520:21586-21605 | MS.gene36891:CDS | 40.0% |
| !!! | TTTTTTGAGTAAACCGGGTG+AGG | - | 57520:22391-22410 | MS.gene36891:intron | 40.0% |
| AAAAACATGGAAAGGGACGC+TGG | - | 57520:23091-23110 | MS.gene36891:intron | 45.0% | |
| AAACAACAGGGACTAGGACA+GGG | + | 57520:22017-22036 | MS.gene36891:intergenic | 45.0% | |
| AAAGTCATGCCCCAAGGAAA+GGG | - | 57520:22771-22790 | MS.gene36891:intron | 45.0% | |
| AAGAGACTCAGCTTGTGCAA+TGG | + | 57520:21522-21541 | MS.gene36891:intergenic | 45.0% | |
| ACAGATATCATTGAGTCGGG+TGG | - | 57520:22656-22675 | MS.gene36891:intron | 45.0% | |
| AGATCCCTCTAAGCATAGCA+TGG | - | 57520:22610-22629 | MS.gene36891:intron | 45.0% | |
| AGTAACCCTAACCTCAACAC+CGG | + | 57520:21254-21273 | MS.gene36891:intergenic | 45.0% | |
| ATCGATGCAGCTATTGAGTC+CGG | + | 57520:23773-23792 | MS.gene36891:intergenic | 45.0% | |
| ATGCTTGACTGGGATCCTAA+AGG | - | 57520:21883-21902 | MS.gene36891:intron | 45.0% | |
| ATGTACTCTTCCTCCTCCTT+TGG | + | 57520:21958-21977 | MS.gene36891:intergenic | 45.0% | |
| CGAACGACCAATAAGGTTGT+TGG | + | 57520:21780-21799 | MS.gene36891:intergenic | 45.0% | |
| CTTCTTTACAAGCTTCTCGG+TGG | - | 57520:21539-21558 | MS.gene36891:CDS | 45.0% | |
| GAAGATCAAGTGACCGATTG+AGG | + | 57520:23799-23818 | MS.gene36891:intergenic | 45.0% | |
| GATGATGATTTCAGTGCGCA+TGG | + | 57520:21278-21297 | MS.gene36891:intergenic | 45.0% | |
| GCATAGCATGGAACAACAAC+AGG | - | 57520:22622-22641 | MS.gene36891:intron | 45.0% | |
| GCCGAGAAAGTTAACAACAG+GGG | - | 57520:21488-21507 | MS.gene36891:CDS | 45.0% | |
| GGCACAGATATCATTGAGTC+GGG | - | 57520:22653-22672 | MS.gene36891:intron | 45.0% | |
| TACCATTCACACTCCAAAGG+AGG | - | 57520:21942-21961 | MS.gene36891:intron | 45.0% | |
| TCATTTGCAACAACAGCAGC+AGG | + | 57520:21985-22004 | MS.gene36891:intergenic | 45.0% | |
| TGCTATGCTTAGAGGGATCT+TGG | + | 57520:22610-22629 | MS.gene36891:intergenic | 45.0% | |
| TGGGATCCTAAAGGAAAGCA+AGG | - | 57520:21892-21911 | MS.gene36891:intron | 45.0% | |
| TGTACCACTAACACGGTAAC+CGG | + | 57520:23643-23662 | MS.gene36891:intergenic | 45.0% | |
| ! | AGATGGATATTCCGGTGTTG+AGG | - | 57520:21240-21259 | MS.gene36891:intron | 45.0% |
| ! | GATATTCCGGTGTTGAGGTT+AGG | - | 57520:21245-21264 | MS.gene36891:intron | 45.0% |
| ! | GTATAGGTGTGATGGGAAGA+AGG | - | 57520:24908-24927 | MS.gene36891:CDS | 45.0% |
| ! | TTTTACAAGAGAGCTTGCCG+AGG | - | 57520:24570-24589 | MS.gene36891:CDS | 45.0% |
| ! | TTTTCCGGTTACCGTGTTAG+TGG | - | 57520:23636-23655 | MS.gene36891:intron | 45.0% |
| !! | GATGGTAGTAGTTCTGGTGT+TGG | - | 57520:23576-23595 | MS.gene36891:intron | 45.0% |
| !!! | AAGTCCCTGTGGTGCTTTTT+TGG | - | 57520:22120-22139 | MS.gene36891:intron | 45.0% |
| !!! | AGTCCCTGTGGTGCTTTTTT+GGG | - | 57520:22121-22140 | MS.gene36891:intron | 45.0% |
| !!! | ATATATGAATTTTTTTTATA+TGG | - | 57520:24782-24801 | MS.gene36891:intron | 5.0% |
| !!! | TATTTTTAATTTGATTTAAA+TGG | - | 57520:21353-21372 | MS.gene36891:intron | 5.0% |
| ACCACTAACCGAGAACAGCT+TGG | + | 57520:21315-21334 | MS.gene36891:intergenic | 50.0% | |
| ACTCGTACCCAAGCTGTTCT+CGG | - | 57520:21304-21323 | MS.gene36891:intron | 50.0% | |
| CAAACAACAGGGACTAGGAC+AGG | + | 57520:22018-22037 | MS.gene36891:intergenic | 50.0% | |
| CAGAAGAAAGTCATGCCCCA+AGG | - | 57520:22765-22784 | MS.gene36891:intron | 50.0% | |
| CATTCACACTCCAAAGGAGG+AGG | - | 57520:21945-21964 | MS.gene36891:intron | 50.0% | |
| CCACTAACCGAGAACAGCTT+GGG | + | 57520:21314-21333 | MS.gene36891:intergenic | 50.0% | |
| CTGTCCAATGCCCTTTCCTT+GGG | + | 57520:22784-22803 | MS.gene36891:intergenic | 50.0% | |
| CTTGCCGAGGATGGTTATTC+TGG | - | 57520:24583-24602 | MS.gene36891:CDS | 50.0% | |
| CTTGGGGCATGACTTTCTTC+TGG | + | 57520:22767-22786 | MS.gene36891:intergenic | 50.0% | |
| GAAAGTCATGCCCCAAGGAA+AGG | - | 57520:22770-22789 | MS.gene36891:intron | 50.0% | |
| GACGGGTATATGATCTCGTC+CGG | - | 57520:21686-21705 | MS.gene36891:intron | 50.0% | |
| GAGCCTGTTACGGTGTCTTA+AGG | - | 57520:21576-21595 | MS.gene36891:CDS | 50.0% | |
| GAGTAAACCGGGTGAGGATA+GGG | - | 57520:22397-22416 | MS.gene36891:intron | 50.0% | |
| GCATGGCTAGCAACTTGAGT+TGG | + | 57520:23153-23172 | MS.gene36891:intergenic | 50.0% | |
| TCCATCTTCAGCAAGCTCTC+TGG | + | 57520:21227-21246 | MS.gene36891:intergenic | 50.0% | |
| TCGATGCAGCTATTGAGTCC+GGG | + | 57520:23772-23791 | MS.gene36891:intergenic | 50.0% | |
| TCTGTCCAATGCCCTTTCCT+TGG | + | 57520:22785-22804 | MS.gene36891:intergenic | 50.0% | |
| TCTTAGTCCCTATCCTCACC+CGG | + | 57520:22407-22426 | MS.gene36891:intergenic | 50.0% | |
| TGAGTAAACCGGGTGAGGAT+AGG | - | 57520:22396-22415 | MS.gene36891:intron | 50.0% | |
| TGTCCAATGCCCTTTCCTTG+GGG | + | 57520:22783-22802 | MS.gene36891:intergenic | 50.0% | |
| ! | AGGAGGAGGAAGAGTACATC+AGG | - | 57520:21959-21978 | MS.gene36891:intron | 50.0% |
| ! | CTGCATCGATCTCCCTCAAT+CGG | - | 57520:23783-23802 | MS.gene36891:intron | 50.0% |
| !! | AAGGAAAGGGCATTGGACAG+AGG | - | 57520:22784-22803 | MS.gene36891:intron | 50.0% |
| !! | ACCAGAGAGCTTGCTGAAGA+TGG | - | 57520:21223-21242 | MS.gene36891:intron | 50.0% |
| !! | CTCCTCCTTTGGAGTGTGAA+TGG | + | 57520:21947-21966 | MS.gene36891:intergenic | 50.0% |
| ACAAGAGAGCTTGCCGAGGA+TGG | - | 57520:24574-24593 | MS.gene36891:CDS | 55.0% | |
| ACTCGCACCCAAGTTGCTCT+TGG | - | 57520:24655-24674 | MS.gene36891:CDS | 55.0% | |
| CCCAAGCTGTTCTCGGTTAG+TGG | - | 57520:21311-21330 | MS.gene36891:intron | 55.0% | |
| CTCGTCCGGACAACCTGTTA+AGG | - | 57520:21700-21719 | MS.gene36891:intron | 55.0% | |
| GCAGTTCGCAGAGCCTGTTA+CGG | - | 57520:21566-21585 | MS.gene36891:CDS | 55.0% | |
| ! | AAGTGGTGCTAAGGGCTGTG+AGG | - | 57520:21610-21629 | MS.gene36891:CDS | 55.0% |
| ! | ATGCCCCAAGGAAAGGGCAT+TGG | - | 57520:22777-22796 | MS.gene36891:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57520 | gene | 21178 | 24969 | 21178 | ID=MS.gene36891 |
| 57520 | mRNA | 21178 | 24969 | 21178 | ID=MS.gene36891.t1;Parent=MS.gene36891 |
| 57520 | exon | 24822 | 24969 | 24822 | ID=MS.gene36891.t1.exon1;Parent=MS.gene36891.t1 |
| 57520 | CDS | 24822 | 24969 | 24822 | ID=cds.MS.gene36891.t1;Parent=MS.gene36891.t1 |
| 57520 | exon | 24384 | 24742 | 24384 | ID=MS.gene36891.t1.exon2;Parent=MS.gene36891.t1 |
| 57520 | CDS | 24384 | 24742 | 24384 | ID=cds.MS.gene36891.t1;Parent=MS.gene36891.t1 |
| 57520 | exon | 24136 | 24291 | 24136 | ID=MS.gene36891.t1.exon3;Parent=MS.gene36891.t1 |
| 57520 | CDS | 24136 | 24291 | 24136 | ID=cds.MS.gene36891.t1;Parent=MS.gene36891.t1 |
| 57520 | exon | 23331 | 23503 | 23331 | ID=MS.gene36891.t1.exon4;Parent=MS.gene36891.t1 |
| 57520 | CDS | 23331 | 23503 | 23331 | ID=cds.MS.gene36891.t1;Parent=MS.gene36891.t1 |
| 57520 | exon | 21471 | 21643 | 21471 | ID=MS.gene36891.t1.exon5;Parent=MS.gene36891.t1 |
| 57520 | CDS | 21471 | 21643 | 21471 | ID=cds.MS.gene36891.t1;Parent=MS.gene36891.t1 |
| 57520 | exon | 21178 | 21233 | 21178 | ID=MS.gene36891.t1.exon6;Parent=MS.gene36891.t1 |
| 57520 | CDS | 21178 | 21233 | 21178 | ID=cds.MS.gene36891.t1;Parent=MS.gene36891.t1 |
| Gene Sequence |
| Protein sequence |
