Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98326.t1 | XP_003605677.3 | 97.3 | 330 | 9 | 0 | 1 | 330 | 1 | 330 | 4.10E-180 | 640.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98326.t1 | Q9SV68 | 74.2 | 330 | 84 | 1 | 1 | 330 | 1 | 329 | 2.3e-139 | 496.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98326.t1 | A0A396I9R6 | 97.3 | 330 | 9 | 0 | 1 | 330 | 1 | 330 | 2.9e-180 | 640.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050750 | MS.gene98326 | 0.825888 | 3.67E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene98326 | 0.819826 | 9.47E-53 | -1.69E-46 |
| MS.gene051368 | MS.gene98326 | 0.801273 | 9.73E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene98326 | -0.800021 | 1.75E-48 | -1.69E-46 |
| MS.gene052176 | MS.gene98326 | 0.837958 | 3.82E-57 | -1.69E-46 |
| MS.gene052190 | MS.gene98326 | 0.809165 | 2.17E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene98326 | 0.812226 | 4.72E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene98326 | 0.806599 | 7.61E-50 | -1.69E-46 |
| MS.gene053006 | MS.gene98326 | 0.8104 | 1.17E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene98326 | 0.837779 | 4.25E-57 | -1.69E-46 |
| MS.gene054236 | MS.gene98326 | 0.804683 | 1.92E-49 | -1.69E-46 |
| MS.gene054405 | MS.gene98326 | 0.816351 | 5.78E-52 | -1.69E-46 |
| MS.gene054559 | MS.gene98326 | 0.823246 | 1.54E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene98326 | 0.801554 | 8.52E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene98326 | 0.812934 | 3.30E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene98326 | 0.801524 | 8.65E-49 | -1.69E-46 |
| MS.gene056498 | MS.gene98326 | 0.808517 | 2.98E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene98326 | 0.851844 | 6.81E-61 | -1.69E-46 |
| MS.gene057026 | MS.gene98326 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene98326 | 0.804775 | 1.84E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene98326 | 0.800361 | 1.49E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene98326 | 0.816028 | 6.83E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene98326 | 0.812163 | 4.87E-51 | -1.69E-46 |
| MS.gene059306 | MS.gene98326 | 0.802309 | 5.97E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene98326 | 0.837608 | 4.70E-57 | -1.69E-46 |
| MS.gene061040 | MS.gene98326 | -0.824778 | 6.71E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98326.t1 | MTR_4g036310 | 82.675 | 329 | 56 | 1 | 1 | 329 | 1 | 328 | 0.0 | 556 |
| MS.gene98326.t1 | MTR_4g033205 | 80.303 | 330 | 64 | 1 | 1 | 330 | 1 | 329 | 0.0 | 541 |
| MS.gene98326.t1 | MTR_4g032995 | 80.303 | 330 | 64 | 1 | 1 | 330 | 1 | 329 | 0.0 | 540 |
| MS.gene98326.t1 | MTR_4g036260 | 97.417 | 271 | 7 | 0 | 60 | 330 | 38 | 308 | 0.0 | 538 |
| MS.gene98326.t1 | MTR_4g036170 | 74.468 | 329 | 58 | 4 | 1 | 329 | 1 | 303 | 1.93e-169 | 473 |
| MS.gene98326.t1 | MTR_7g055743 | 67.638 | 309 | 99 | 1 | 21 | 329 | 61 | 368 | 1.16e-149 | 426 |
| MS.gene98326.t1 | MTR_8g064610 | 35.673 | 342 | 168 | 11 | 6 | 330 | 76 | 382 | 4.32e-43 | 153 |
| MS.gene98326.t1 | MTR_4g036150 | 80.282 | 71 | 14 | 0 | 1 | 71 | 1 | 71 | 2.24e-38 | 131 |
| MS.gene98326.t1 | MTR_8g035630 | 32.738 | 336 | 185 | 10 | 4 | 328 | 2 | 307 | 6.84e-34 | 127 |
| MS.gene98326.t1 | MTR_8g035880 | 32.738 | 336 | 185 | 10 | 4 | 328 | 2 | 307 | 1.43e-33 | 126 |
| MS.gene98326.t1 | MTR_6g012170 | 33.433 | 335 | 184 | 9 | 7 | 330 | 12 | 318 | 8.39e-33 | 124 |
| MS.gene98326.t1 | MTR_7g034395 | 34.203 | 345 | 182 | 13 | 1 | 330 | 1 | 315 | 3.71e-31 | 119 |
| MS.gene98326.t1 | MTR_2g078520 | 29.446 | 343 | 212 | 9 | 7 | 329 | 27 | 359 | 1.13e-27 | 111 |
| MS.gene98326.t1 | MTR_6g012160 | 31.613 | 310 | 175 | 7 | 7 | 307 | 12 | 293 | 5.47e-26 | 105 |
| MS.gene98326.t1 | MTR_4g050760 | 27.744 | 328 | 208 | 11 | 16 | 328 | 10 | 323 | 2.97e-21 | 92.8 |
| MS.gene98326.t1 | MTR_2g012380 | 27.744 | 328 | 208 | 11 | 16 | 328 | 10 | 323 | 2.97e-21 | 92.8 |
| MS.gene98326.t1 | MTR_2g012420 | 27.245 | 323 | 206 | 10 | 21 | 328 | 15 | 323 | 7.62e-20 | 89.0 |
| MS.gene98326.t1 | MTR_2g012380 | 30.876 | 217 | 136 | 6 | 16 | 229 | 10 | 215 | 4.37e-19 | 85.9 |
| MS.gene98326.t1 | MTR_4g086400 | 30.793 | 328 | 191 | 13 | 24 | 328 | 166 | 480 | 4.02e-17 | 82.4 |
| MS.gene98326.t1 | MTR_4g086410 | 30.211 | 331 | 189 | 13 | 24 | 328 | 306 | 620 | 4.03e-17 | 82.4 |
| MS.gene98326.t1 | MTR_4g086400 | 30.793 | 328 | 191 | 13 | 24 | 328 | 306 | 620 | 5.17e-17 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98326.t1 | AT4G13010 | 74.242 | 330 | 84 | 1 | 1 | 330 | 1 | 329 | 1.41e-176 | 492 |
| MS.gene98326.t1 | AT1G23740 | 35.294 | 340 | 176 | 11 | 4 | 330 | 76 | 384 | 1.01e-41 | 149 |
| MS.gene98326.t1 | AT3G15090 | 30.650 | 323 | 196 | 6 | 26 | 329 | 52 | 365 | 2.49e-29 | 115 |
| MS.gene98326.t1 | AT1G49670 | 31.737 | 334 | 186 | 16 | 19 | 328 | 301 | 616 | 1.52e-18 | 87.0 |
| MS.gene98326.t1 | AT1G49670 | 30.398 | 352 | 190 | 17 | 19 | 328 | 301 | 639 | 1.15e-15 | 78.2 |
| MS.gene98326.t1 | AT4G21580 | 27.019 | 322 | 210 | 13 | 21 | 329 | 15 | 324 | 2.33e-15 | 76.3 |
| MS.gene98326.t1 | AT4G21580 | 27.103 | 321 | 205 | 13 | 21 | 329 | 15 | 318 | 7.42e-15 | 74.7 |
| MS.gene98326.t1 | AT5G61510 | 25.460 | 326 | 220 | 8 | 16 | 330 | 93 | 406 | 2.65e-12 | 67.8 |
Find 76 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCCTAATTTGAGTGAAAA+AGG | 0.192233 | 4.1:+66716887 | MS.gene98326:CDS |
| CGTGACGCCCTCACAGAAAT+TGG | 0.273115 | 4.1:+66716590 | MS.gene98326:CDS |
| AGTAAAACTTCATTGGTCTT+TGG | 0.287529 | 4.1:-66712555 | None:intergenic |
| GACTGAATCTTCCAATCAAC+TGG | 0.313131 | 4.1:-66712603 | None:intergenic |
| CACGTGGTTGTTCCCTAGTT+TGG | 0.331494 | 4.1:-66716702 | None:intergenic |
| AGATTCAGTCTGGTGCTCTA+AGG | 0.338199 | 4.1:+66712616 | MS.gene98326:CDS |
| TCCTATGGCGGAGGAGTCTC+TGG | 0.355413 | 4.1:+66712386 | MS.gene98326:CDS |
| CAATTTGAGTAAAACTTCAT+TGG | 0.361551 | 4.1:-66712562 | None:intergenic |
| CCTTCAGCAGCTGAGACTTC+AGG | 0.372713 | 4.1:-66716536 | None:intergenic |
| AACTGTTAAGCGTGAGGGCT+TGG | 0.380438 | 4.1:+66717006 | MS.gene98326:CDS |
| TGGCGAGCAGAAGAATGTTT+TGG | 0.398444 | 4.1:+66716634 | MS.gene98326:CDS |
| ATTGGAGGAATTAAGCTTGA+TGG | 0.403108 | 4.1:+66716608 | MS.gene98326:CDS |
| AGCTGAGACTTCAGGTGGTC+TGG | 0.404146 | 4.1:-66716528 | None:intergenic |
| AGTATTGATGGCCATGCTAC+TGG | 0.420478 | 4.1:+66717121 | MS.gene98326:CDS |
| GCTGTTCAACTTGCCAAACT+AGG | 0.421441 | 4.1:+66716689 | MS.gene98326:CDS |
| GCAGGAGAGGTGGTAGAGAT+TGG | 0.428775 | 4.1:+66713724 | MS.gene98326:CDS |
| TGAGCAAAGCTGAAGATGCT+TGG | 0.430166 | 4.1:+66717092 | MS.gene98326:CDS |
| CTCTTCAGTGATGTTCCCTC+TGG | 0.430862 | 4.1:-66716800 | None:intergenic |
| GGTGCAAGTTTACCTATTGC+CGG | 0.431610 | 4.1:+66716557 | MS.gene98326:CDS |
| ATTGACTTCGTTAAGAGCTT+AGG | 0.432964 | 4.1:+66716749 | MS.gene98326:CDS |
| TTGGTCTTTGGAGTTGGTAC+AGG | 0.448329 | 4.1:-66712543 | None:intergenic |
| GAGCAAAGCTGAAGATGCTT+GGG | 0.448420 | 4.1:+66717093 | MS.gene98326:CDS |
| CGGAGGAGTCTCTGGATTGA+AGG | 0.450051 | 4.1:+66712394 | MS.gene98326:CDS |
| GCAAAAGTCAACATTGAACT+TGG | 0.454364 | 4.1:-66716935 | None:intergenic |
| GCTTGGGCTAAGAGTATTGA+TGG | 0.455624 | 4.1:+66717109 | MS.gene98326:CDS |
| CTAGCATCAACCCAGTTGAT+TGG | 0.458227 | 4.1:+66712592 | MS.gene98326:CDS |
| CGAGCTGTGAGACCGGCAAT+AGG | 0.465576 | 4.1:-66716569 | None:intergenic |
| GGAATTAAGCTTGATGGGAC+TGG | 0.474637 | 4.1:+66716614 | MS.gene98326:CDS |
| GCATCTTCAGCTTTGCTCAA+AGG | 0.476004 | 4.1:-66717088 | None:intergenic |
| ACTTCATTGGTCTTTGGAGT+TGG | 0.486575 | 4.1:-66712549 | None:intergenic |
| GTCAACATTGAACTTGGGCC+AGG | 0.489320 | 4.1:-66716929 | None:intergenic |
| TTGGAGGAATTAAGCTTGAT+GGG | 0.490626 | 4.1:+66716609 | MS.gene98326:CDS |
| ACTGCTGCTTCAGGTGGTGT+AGG | 0.492958 | 4.1:+66716659 | MS.gene98326:CDS |
| GGCGTCACGAGCTGTGAGAC+CGG | 0.493743 | 4.1:-66716576 | None:intergenic |
| GATTCAGGCACTGATGTAGC+AGG | 0.496812 | 4.1:+66713706 | MS.gene98326:intron |
| ACATCACTGAAGAGTCCATC+TGG | 0.503456 | 4.1:+66716809 | MS.gene98326:CDS |
| CTGTTCAACTTGCCAAACTA+GGG | 0.504458 | 4.1:+66716690 | MS.gene98326:CDS |
| GCAGTAATACATTGCACCAC+TGG | 0.505627 | 4.1:+66716845 | MS.gene98326:CDS |
| CGCTTAACAGTTACAACGAA+TGG | 0.512764 | 4.1:-66716995 | None:intergenic |
| GCTCTTCAGTACAGTTCCTA+TGG | 0.513825 | 4.1:+66712371 | MS.gene98326:CDS |
| GTTGTCGTGGATTTAACACC+TGG | 0.523492 | 4.1:+66716911 | MS.gene98326:CDS |
| AATTCCTCCAATTTCTGTGA+GGG | 0.528728 | 4.1:-66716597 | None:intergenic |
| AGAGATTGGACCACAAGTAA+AGG | 0.530015 | 4.1:+66713738 | MS.gene98326:CDS |
| GCTTTAAAATCCTTTACTTG+TGG | 0.532691 | 4.1:-66713748 | None:intergenic |
| GTTGATTGGAAGATTCAGTC+TGG | 0.533264 | 4.1:+66712606 | MS.gene98326:CDS |
| GATTCAGTCTGGTGCTCTAA+GGG | 0.542295 | 4.1:+66712617 | MS.gene98326:CDS |
| TTGGTAACTGCTGCTTCAGG+TGG | 0.558002 | 4.1:+66716653 | MS.gene98326:CDS |
| CTCGCTCAACTAGTGAAGGA+TGG | 0.564162 | 4.1:+66717034 | MS.gene98326:CDS |
| CACTGATGTAGCAGGAGAGG+TGG | 0.568543 | 4.1:+66713714 | MS.gene98326:CDS |
| GTTGTAACTGTTAAGCGTGA+GGG | 0.570258 | 4.1:+66717001 | MS.gene98326:CDS |
| TCCAGAGACTCCTCCGCCAT+AGG | 0.573666 | 4.1:-66712387 | None:intergenic |
| CAGTACAGTTCCTATGGCGG+AGG | 0.575427 | 4.1:+66712377 | MS.gene98326:CDS |
| CCTGAAGTCTCAGCTGCTGA+AGG | 0.576984 | 4.1:+66716536 | MS.gene98326:CDS |
| CGTTGTAACTGTTAAGCGTG+AGG | 0.578759 | 4.1:+66717000 | MS.gene98326:CDS |
| ACATCTCGCTCAACTAGTGA+AGG | 0.592170 | 4.1:+66717030 | MS.gene98326:CDS |
| TGTGAATGACAGTATGGAGG+TGG | 0.601090 | 4.1:+66716464 | MS.gene98326:intron |
| CAAAAGTCAACATTGAACTT+GGG | 0.607885 | 4.1:-66716934 | None:intergenic |
| GACGCCCTCACAGAAATTGG+AGG | 0.616536 | 4.1:+66716593 | MS.gene98326:CDS |
| TAAGAGCTTAGGTGCTGACG+AGG | 0.617355 | 4.1:+66716760 | MS.gene98326:CDS |
| AATGTTACGAGCACCACAAG+TGG | 0.621983 | 4.1:-66716729 | None:intergenic |
| AGGCACTGATGTAGCAGGAG+AGG | 0.623043 | 4.1:+66713711 | MS.gene98326:intron |
| CACCACAAGTGGCTGTCACG+TGG | 0.628418 | 4.1:-66716718 | None:intergenic |
| TGTTAAGCTCTCGCTAGCCA+CGG | 0.646494 | 4.1:-66716501 | None:intergenic |
| TGGACTAGCTGAGTTTGCCG+TGG | 0.647341 | 4.1:+66716484 | MS.gene98326:CDS |
| AACCACGTGACAGCCACTTG+TGG | 0.652023 | 4.1:+66716716 | MS.gene98326:CDS |
| TAATTCCTCCAATTTCTGTG+AGG | 0.652507 | 4.1:-66716598 | None:intergenic |
| CTTGACTACAAAACTCCAGA+GGG | 0.654718 | 4.1:+66716785 | MS.gene98326:CDS |
| TCAGCAGCTGAGACTTCAGG+TGG | 0.657763 | 4.1:-66716533 | None:intergenic |
| CTTCAGTACAGTTCCTATGG+CGG | 0.668012 | 4.1:+66712374 | MS.gene98326:CDS |
| TTATGTGAATGACAGTATGG+AGG | 0.672015 | 4.1:+66716461 | MS.gene98326:intron |
| ACTGAATCTTCCAATCAACT+GGG | 0.677961 | 4.1:-66712602 | None:intergenic |
| TCTTGACTACAAAACTCCAG+AGG | 0.691725 | 4.1:+66716784 | MS.gene98326:CDS |
| TGTGTCATACAAGGTATGTG+AGG | 0.694115 | 4.1:-66712663 | None:intergenic |
| AGTTGACCACGGTATTCCAG+TGG | 0.695051 | 4.1:-66716861 | None:intergenic |
| TTAGGATCAAAAGTTGACCA+CGG | 0.710883 | 4.1:-66716872 | None:intergenic |
| ATTGCACCACTGGAATACCG+TGG | 0.745198 | 4.1:+66716855 | MS.gene98326:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGAAATTAAAATATTGTT+TGG | - | chr4.1:66715186-66715205 | None:intergenic | 10.0% |
| !! | ATATGAAATAAAAAAAACGT+TGG | - | chr4.1:66716393-66716412 | None:intergenic | 15.0% |
| !! | ATTCAATTCAATTCAATTAT+TGG | + | chr4.1:66712497-66712516 | MS.gene98326:intron | 15.0% |
| !! | CAATCAAAGAAAAAAAATAT+AGG | - | chr4.1:66713541-66713560 | None:intergenic | 15.0% |
| !! | CATTTATATATTAATTACAC+TGG | + | chr4.1:66716414-66716433 | MS.gene98326:intron | 15.0% |
| !!! | AATTATAAATATAGGTTGAA+AGG | - | chr4.1:66714638-66714657 | None:intergenic | 15.0% |
| !!! | ATTATAAATATAGGTTGAAA+GGG | - | chr4.1:66714637-66714656 | None:intergenic | 15.0% |
| !! | AAATAAAAAAAACGTTGGAT+TGG | - | chr4.1:66716388-66716407 | None:intergenic | 20.0% |
| !! | AACCAAAATAAATTCTTCTT+TGG | + | chr4.1:66715097-66715116 | MS.gene98326:intron | 20.0% |
| !! | AATTAACAGTATAAATCATG+TGG | - | chr4.1:66716253-66716272 | None:intergenic | 20.0% |
| !! | ACCAAAATAAATTCTTCTTT+GGG | + | chr4.1:66715098-66715117 | MS.gene98326:intron | 20.0% |
| !! | ATTACTGTGTAATTAATAGA+AGG | - | chr4.1:66716103-66716122 | None:intergenic | 20.0% |
| !! | CTAGAAAACTGAAATATTAT+TGG | + | chr4.1:66712916-66712935 | MS.gene98326:intron | 20.0% |
| !! | GTACAAGTAAATCAAATTAT+AGG | - | chr4.1:66712718-66712737 | None:intergenic | 20.0% |
| !! | GTAGTCTGAATTATAAATAT+AGG | - | chr4.1:66714646-66714665 | None:intergenic | 20.0% |
| !! | GTATAATAATTATTAGTCAC+AGG | - | chr4.1:66714413-66714432 | None:intergenic | 20.0% |
| !! | TTTAAAAACTCGTTTATTTC+TGG | - | chr4.1:66715501-66715520 | None:intergenic | 20.0% |
| !! | TTTCATATCTCCATAATTTA+GGG | - | chr4.1:66715453-66715472 | None:intergenic | 20.0% |
| !! | TTTGTAATAAAATTGCATGA+TGG | - | chr4.1:66714356-66714375 | None:intergenic | 20.0% |
| !!! | ACTCATTTTTGCTTATAAAT+AGG | - | chr4.1:66714890-66714909 | None:intergenic | 20.0% |
| !!! | ATCAATATTTTGATATGTGA+TGG | - | chr4.1:66714051-66714070 | None:intergenic | 20.0% |
| !!! | GAATTTTAAACTCAAACAAA+TGG | - | chr4.1:66714529-66714548 | None:intergenic | 20.0% |
| !!! | TTTTAAGAATTAGATGGAAA+TGG | + | chr4.1:66715932-66715951 | MS.gene98326:intron | 20.0% |
| !!! | TTTTCATATCTCCATAATTT+AGG | - | chr4.1:66715454-66715473 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATAAATAGGAA+TGG | - | chr4.1:66714885-66714904 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTATAGATAGGAA+CGG | + | chr4.1:66714972-66714991 | MS.gene98326:intron | 20.0% |
| ! | AAATTGAAATGCAATCATCT+TGG | + | chr4.1:66715144-66715163 | MS.gene98326:intron | 25.0% |
| ! | AACTAAAAATAACTCAGAGA+TGG | - | chr4.1:66713031-66713050 | None:intergenic | 25.0% |
| ! | AAGATGATTGCATTTCAATT+TGG | - | chr4.1:66715145-66715164 | None:intergenic | 25.0% |
| ! | AATAACCTTCTCTTTAGTAA+AGG | + | chr4.1:66716178-66716197 | MS.gene98326:intron | 25.0% |
| ! | AATTAAGATTCCTTTGATCT+TGG | + | chr4.1:66713677-66713696 | MS.gene98326:intron | 25.0% |
| ! | AATTATTAGTCACAGGAATA+AGG | - | chr4.1:66714406-66714425 | None:intergenic | 25.0% |
| ! | ACTAAAAATAACTCAGAGAT+GGG | - | chr4.1:66713030-66713049 | None:intergenic | 25.0% |
| ! | ACTTGAATTAACACAGATAA+TGG | - | chr4.1:66713848-66713867 | None:intergenic | 25.0% |
| ! | ATCACTAGAAATAGAATCTA+GGG | + | chr4.1:66715052-66715071 | MS.gene98326:intron | 25.0% |
| ! | ATCCTAATTTGAGTGAAAAA+GGG | + | chr4.1:66716888-66716907 | MS.gene98326:CDS | 25.0% |
| ! | ATTAAGATTCCTTTGATCTT+GGG | + | chr4.1:66713678-66713697 | MS.gene98326:intron | 25.0% |
| ! | CAATTTGAGTAAAACTTCAT+TGG | - | chr4.1:66712565-66712584 | None:intergenic | 25.0% |
| ! | CACTTAACACATGAAATTAA+CGG | + | chr4.1:66715639-66715658 | MS.gene98326:intron | 25.0% |
| ! | CACTTATCAACAAATCTAAA+AGG | + | chr4.1:66715269-66715288 | MS.gene98326:intron | 25.0% |
| ! | GAAATATTATTGGATGTTTC+TGG | + | chr4.1:66712926-66712945 | MS.gene98326:intron | 25.0% |
| ! | GATGTATTTGCTTAAAAATG+TGG | - | chr4.1:66714936-66714955 | None:intergenic | 25.0% |
| ! | GGAGATATGAAAATTTCTTA+AGG | + | chr4.1:66715461-66715480 | MS.gene98326:intron | 25.0% |
| ! | TAAATCACTAATCTATAGCT+TGG | + | chr4.1:66714275-66714294 | MS.gene98326:intron | 25.0% |
| ! | TAAGCAGTTTATTAGTAATG+TGG | - | chr4.1:66714833-66714852 | None:intergenic | 25.0% |
| ! | TAATCAAATCATACCTTTCT+AGG | - | chr4.1:66715991-66716010 | None:intergenic | 25.0% |
| ! | TATAAGAAAAAACGAGTCAA+AGG | - | chr4.1:66714964-66714983 | None:intergenic | 25.0% |
| ! | TATCACTAGAAATAGAATCT+AGG | + | chr4.1:66715051-66715070 | MS.gene98326:intron | 25.0% |
| ! | TCATTCACATAACACAAAAT+TGG | - | chr4.1:66716453-66716472 | None:intergenic | 25.0% |
| ! | TGTGTAATTAATAGAAGGTA+AGG | - | chr4.1:66716098-66716117 | None:intergenic | 25.0% |
| ! | TTATCTATAAGTACCCAATT+TGG | - | chr4.1:66715732-66715751 | None:intergenic | 25.0% |
| ! | TTGCAATATCAATAAAACGA+GGG | - | chr4.1:66714022-66714041 | None:intergenic | 25.0% |
| ! | TTTGCAATATCAATAAAACG+AGG | - | chr4.1:66714023-66714042 | None:intergenic | 25.0% |
| !! | ACCCAAAGAAGAATTTATTT+TGG | - | chr4.1:66715102-66715121 | None:intergenic | 25.0% |
| !! | CAATGAAGTTTTACTCAAAT+TGG | + | chr4.1:66712563-66712582 | MS.gene98326:CDS | 25.0% |
| !! | CATGCAATTTTATTACAAAC+CGG | + | chr4.1:66714357-66714376 | MS.gene98326:intron | 25.0% |
| !! | GATTTAGTTTCTTTACATAC+TGG | - | chr4.1:66714261-66714280 | None:intergenic | 25.0% |
| !! | TATCGATAGATTACTACTTT+TGG | + | chr4.1:66715759-66715778 | MS.gene98326:intron | 25.0% |
| !! | TGTTTCTCCAACAAATTTTT+GGG | + | chr4.1:66715245-66715264 | MS.gene98326:intron | 25.0% |
| !! | TTGTTGATTGATTTACCAAT+TGG | - | chr4.1:66715785-66715804 | None:intergenic | 25.0% |
| !! | TTTAAAATTCCTTTAGCAAG+AGG | + | chr4.1:66714539-66714558 | MS.gene98326:intron | 25.0% |
| !!! | ACTCGTTTTTTCTTATAGAT+AGG | + | chr4.1:66714967-66714986 | MS.gene98326:intron | 25.0% |
| !!! | CTAAGGTTTTAAGAATTAGA+TGG | + | chr4.1:66715926-66715945 | MS.gene98326:intron | 25.0% |
| !!! | CTTTTAGATTTGTTGATAAG+TGG | - | chr4.1:66715271-66715290 | None:intergenic | 25.0% |
| !!! | GACAATATTTTGATAAGTCA+GGG | + | chr4.1:66715674-66715693 | MS.gene98326:intron | 25.0% |
| !!! | TGACAATATTTTGATAAGTC+AGG | + | chr4.1:66715673-66715692 | MS.gene98326:intron | 25.0% |
| !!! | TTAACACAGATAATGGAAAA+CGG | - | chr4.1:66713841-66713860 | None:intergenic | 25.0% |
| !!! | TTCATTTTTCAAAACCGAAT+TGG | + | chr4.1:66712987-66713006 | MS.gene98326:intron | 25.0% |
| !!! | TTTTGAAAGAGATGAGAAAT+GGG | - | chr4.1:66712436-66712455 | None:intergenic | 25.0% |
| AAAAGATAAACTCAAAACCG+TGG | + | chr4.1:66714459-66714478 | MS.gene98326:intron | 30.0% | |
| AAATCATACCTTTCTAGGTA+AGG | - | chr4.1:66715986-66716005 | None:intergenic | 30.0% | |
| AAGCAAAAATGAGTCAAAGA+AGG | + | chr4.1:66714896-66714915 | MS.gene98326:intron | 30.0% | |
| AATAAAGTTTACTGCCATGA+TGG | + | chr4.1:66714380-66714399 | MS.gene98326:intron | 30.0% | |
| AATGGTAAAACCATGGTAAA+TGG | - | chr4.1:66714511-66714530 | None:intergenic | 30.0% | |
| AGACAACTGGAAATAGATAT+TGG | - | chr4.1:66714215-66714234 | None:intergenic | 30.0% | |
| AGGTAAGGCTAATCAAAATA+AGG | - | chr4.1:66715971-66715990 | None:intergenic | 30.0% | |
| ATACACCTTTACTAAAGAGA+AGG | - | chr4.1:66716186-66716205 | None:intergenic | 30.0% | |
| ATGTCATAAGCTATTCCTTT+AGG | - | chr4.1:66713408-66713427 | None:intergenic | 30.0% | |
| ATGTTAGACAGACAACAAAT+TGG | - | chr4.1:66715856-66715875 | None:intergenic | 30.0% | |
| CAAAAGTCAACATTGAACTT+GGG | - | chr4.1:66716937-66716956 | None:intergenic | 30.0% | |
| CAAATACTGTAATACTACGA+TGG | - | chr4.1:66714324-66714343 | None:intergenic | 30.0% | |
| CGTTAATTTCATGTGTTAAG+TGG | - | chr4.1:66715641-66715660 | None:intergenic | 30.0% | |
| CTAAAAATAACTCAGAGATG+GGG | - | chr4.1:66713029-66713048 | None:intergenic | 30.0% | |
| CTAAAGTAGTACATCCAAAT+TGG | - | chr4.1:66712843-66712862 | None:intergenic | 30.0% | |
| GATCCTAATTTGAGTGAAAA+AGG | + | chr4.1:66716887-66716906 | MS.gene98326:CDS | 30.0% | |
| GATTAAATCGATAAAACGCT+AGG | + | chr4.1:66714172-66714191 | MS.gene98326:intron | 30.0% | |
| GCAGTCTGAATTATAAATAC+AGG | - | chr4.1:66714590-66714609 | None:intergenic | 30.0% | |
| GCTTATGACATATCTAAGAA+TGG | + | chr4.1:66713417-66713436 | MS.gene98326:intron | 30.0% | |
| GGCAGAAAAAGTAAAAAAGA+AGG | - | chr4.1:66712697-66712716 | None:intergenic | 30.0% | |
| GTGATACTAAGTTTCTGTTT+GGG | + | chr4.1:66713177-66713196 | MS.gene98326:intron | 30.0% | |
| TAAAAATAACTCAGAGATGG+GGG | - | chr4.1:66713028-66713047 | None:intergenic | 30.0% | |
| TAACACATGAAATTAACGGA+GGG | + | chr4.1:66715643-66715662 | MS.gene98326:intron | 30.0% | |
| TAATAACACATACCCTTTCA+CGG | + | chr4.1:66713927-66713946 | MS.gene98326:intron | 30.0% | |
| TACTTTAATCCTCTTGCTAA+AGG | - | chr4.1:66714551-66714570 | None:intergenic | 30.0% | |
| TAGTACACGTAAGAAAAAGT+CGG | - | chr4.1:66715555-66715574 | None:intergenic | 30.0% | |
| TATTGCAAGTAAAAGTGAGT+AGG | - | chr4.1:66713656-66713675 | None:intergenic | 30.0% | |
| TCAAACAAATGGTAAAACCA+TGG | - | chr4.1:66714518-66714537 | None:intergenic | 30.0% | |
| TCCTAATTTGAGTGAAAAAG+GGG | + | chr4.1:66716889-66716908 | MS.gene98326:CDS | 30.0% | |
| TGGTAAATCAATCAACAACA+TGG | + | chr4.1:66715787-66715806 | MS.gene98326:intron | 30.0% | |
| TGTCATAAGCTATTCCTTTA+GGG | - | chr4.1:66713407-66713426 | None:intergenic | 30.0% | |
| TGTGATACTAAGTTTCTGTT+TGG | + | chr4.1:66713176-66713195 | MS.gene98326:intron | 30.0% | |
| TTAACACATGAAATTAACGG+AGG | + | chr4.1:66715642-66715661 | MS.gene98326:intron | 30.0% | |
| TTAATAGAAGGTAAGGTTAG+AGG | - | chr4.1:66716091-66716110 | None:intergenic | 30.0% | |
| TTCAACAGGTATAATAACCA+CGG | - | chr4.1:66714479-66714498 | None:intergenic | 30.0% | |
| TTTGGATGTAGTGTTTATGA+GGG | - | chr4.1:66713380-66713399 | None:intergenic | 30.0% | |
| ! | AATATAGGTTGAAAGGGAAA+AGG | - | chr4.1:66714631-66714650 | None:intergenic | 30.0% |
| ! | ATATAGGTTGAAAGGGAAAA+GGG | - | chr4.1:66714630-66714649 | None:intergenic | 30.0% |
| ! | GTGTTTCTCCAACAAATTTT+TGG | + | chr4.1:66715244-66715263 | MS.gene98326:intron | 30.0% |
| ! | TGTACTACTTTAGTTTCTTC+AGG | + | chr4.1:66712850-66712869 | MS.gene98326:intron | 30.0% |
| !! | AAAATTTGTTGGAGAAACAC+AGG | - | chr4.1:66715244-66715263 | None:intergenic | 30.0% |
| !! | AGTAAAACTTCATTGGTCTT+TGG | - | chr4.1:66712558-66712577 | None:intergenic | 30.0% |
| !! | CTTTTGAAAGAGATGAGAAA+TGG | - | chr4.1:66712437-66712456 | None:intergenic | 30.0% |
| !! | GCTTTAAAATCCTTTACTTG+TGG | - | chr4.1:66713751-66713770 | None:intergenic | 30.0% |
| !! | GTGCTTAAGCTTTAAAATCT+AGG | - | chr4.1:66715220-66715239 | None:intergenic | 30.0% |
| !! | TTTTTCAAAACCGAATTGGT+CGG | + | chr4.1:66712991-66713010 | MS.gene98326:intron | 30.0% |
| !!! | AACTTACTTTTTCGAAGAAG+CGG | + | chr4.1:66716966-66716985 | MS.gene98326:CDS | 30.0% |
| !!! | CAAGTAAAGGATTTTAAAGC+TGG | + | chr4.1:66713751-66713770 | MS.gene98326:CDS | 30.0% |
| AAAAGACAAAGACTTGACTC+AGG | + | chr4.1:66715358-66715377 | MS.gene98326:intron | 35.0% | |
| AACATGTTGTCCATATGCAT+CGG | + | chr4.1:66716315-66716334 | MS.gene98326:intron | 35.0% | |
| AATCAAAGTCCCAAGATCAA+AGG | - | chr4.1:66713690-66713709 | None:intergenic | 35.0% | |
| AATCAATCAACAACATGGAG+TGG | + | chr4.1:66715792-66715811 | MS.gene98326:intron | 35.0% | |
| AATTCCTCCAATTTCTGTGA+GGG | - | chr4.1:66716600-66716619 | None:intergenic | 35.0% | |
| ACAAACTACATCTCCAAACA+AGG | - | chr4.1:66716023-66716042 | None:intergenic | 35.0% | |
| ACTGAATCTTCCAATCAACT+GGG | - | chr4.1:66712605-66712624 | None:intergenic | 35.0% | |
| AGACAACAAATTGGAATGGT+TGG | - | chr4.1:66715847-66715866 | None:intergenic | 35.0% | |
| AGACAGACAACAAATTGGAA+TGG | - | chr4.1:66715851-66715870 | None:intergenic | 35.0% | |
| AGTACACGTAAGAAAAAGTC+GGG | - | chr4.1:66715554-66715573 | None:intergenic | 35.0% | |
| ATACTAAGTTTCTGTTTGGG+AGG | + | chr4.1:66713180-66713199 | MS.gene98326:intron | 35.0% | |
| ATACTACGATGGTACATTTC+TGG | - | chr4.1:66714313-66714332 | None:intergenic | 35.0% | |
| ATATCTCGTGATCAATCATG+TGG | - | chr4.1:66716055-66716074 | None:intergenic | 35.0% | |
| ATGCATATGGACAACATGTT+GGG | - | chr4.1:66716315-66716334 | None:intergenic | 35.0% | |
| ATTGGAGGAATTAAGCTTGA+TGG | + | chr4.1:66716608-66716627 | MS.gene98326:CDS | 35.0% | |
| CATGGCAGTAAACTTTATTC+CGG | - | chr4.1:66714379-66714398 | None:intergenic | 35.0% | |
| CTGTTAGCATAGACATTGTA+TGG | - | chr4.1:66715023-66715042 | None:intergenic | 35.0% | |
| GCAAAAGTCAACATTGAACT+TGG | - | chr4.1:66716938-66716957 | None:intergenic | 35.0% | |
| GGTTATTATACCTGTTGAAC+AGG | + | chr4.1:66714480-66714499 | MS.gene98326:intron | 35.0% | |
| GTCGAAACTTAAGATATGTG+TGG | + | chr4.1:66712756-66712775 | MS.gene98326:intron | 35.0% | |
| GTGTTATGTGAATGACAGTA+TGG | + | chr4.1:66716458-66716477 | MS.gene98326:intron | 35.0% | |
| GTTTGGATGTAGTGTTTATG+AGG | - | chr4.1:66713381-66713400 | None:intergenic | 35.0% | |
| TAAAAGAGGAAGAAGACAAC+TGG | - | chr4.1:66714228-66714247 | None:intergenic | 35.0% | |
| TAAGTGGCCCAAAAATTTGT+TGG | - | chr4.1:66715255-66715274 | None:intergenic | 35.0% | |
| TAATGGAAAACGGTAACCTA+AGG | - | chr4.1:66713831-66713850 | None:intergenic | 35.0% | |
| TAATTCCTCCAATTTCTGTG+AGG | - | chr4.1:66716601-66716620 | None:intergenic | 35.0% | |
| TACATCCAAACATACCCTAA+AGG | + | chr4.1:66713390-66713409 | MS.gene98326:intron | 35.0% | |
| TACTAAGTTTCTGTTTGGGA+GGG | + | chr4.1:66713181-66713200 | MS.gene98326:intron | 35.0% | |
| TAGTACACGTAAGCAAAAGT+CGG | + | chr4.1:66714148-66714167 | MS.gene98326:intron | 35.0% | |
| TAGTACATCCAAATTGGCAT+CGG | - | chr4.1:66712837-66712856 | None:intergenic | 35.0% | |
| TAGTGAAAAACCACATGAAC+TGG | + | chr4.1:66712957-66712976 | MS.gene98326:intron | 35.0% | |
| TCTCTTTCTTTCACTTCCTT+AGG | + | chr4.1:66713812-66713831 | MS.gene98326:intron | 35.0% | |
| TGTCACGTTAAGTGATATTC+TGG | + | chr4.1:66714114-66714133 | MS.gene98326:intron | 35.0% | |
| TTAGGATCAAAAGTTGACCA+CGG | - | chr4.1:66716875-66716894 | None:intergenic | 35.0% | |
| TTATGTGAATGACAGTATGG+AGG | + | chr4.1:66716461-66716480 | MS.gene98326:intron | 35.0% | |
| TTCAATGTTACCGATGCATA+TGG | - | chr4.1:66716328-66716347 | None:intergenic | 35.0% | |
| TTCTTATAGATAGGAACGGA+GGG | + | chr4.1:66714976-66714995 | MS.gene98326:intron | 35.0% | |
| TTGGAGGAATTAAGCTTGAT+GGG | + | chr4.1:66716609-66716628 | MS.gene98326:CDS | 35.0% | |
| TTTCTTATAGATAGGAACGG+AGG | + | chr4.1:66714975-66714994 | MS.gene98326:intron | 35.0% | |
| ! | AAAAACGTTGGATTGGAGAT+AGG | - | chr4.1:66716381-66716400 | None:intergenic | 35.0% |
| ! | ATTGACTTCGTTAAGAGCTT+AGG | + | chr4.1:66716749-66716768 | MS.gene98326:CDS | 35.0% |
| ! | CAATGATTTTTCCAGTAGCA+TGG | - | chr4.1:66717135-66717154 | None:intergenic | 35.0% |
| ! | GTTAGTTTCAGTCGGTTAAA+TGG | + | chr4.1:66714086-66714105 | MS.gene98326:intron | 35.0% |
| ! | TCTTTTACCCACAAATGAGT+TGG | - | chr4.1:66714445-66714464 | None:intergenic | 35.0% |
| !! | ACCCCTTTTTCACTCAAATT+AGG | - | chr4.1:66716893-66716912 | None:intergenic | 35.0% |
| !! | CTATTCCTTTAGGGTATGTT+TGG | - | chr4.1:66713398-66713417 | None:intergenic | 35.0% |
| !! | GATTACTACTTTTGGCCAAT+TGG | + | chr4.1:66715767-66715786 | MS.gene98326:intron | 35.0% |
| !! | TTGATTAGCCTTACCTAGAA+AGG | + | chr4.1:66715975-66715994 | MS.gene98326:intron | 35.0% |
| !!! | GCATCGTATTTTTTACCAGA+TGG | - | chr4.1:66716827-66716846 | None:intergenic | 35.0% |
| AAACCACATGAACTGGATTC+AGG | + | chr4.1:66712964-66712983 | MS.gene98326:intron | 40.0% | |
| AACCGACTGAAACTAACAGA+AGG | - | chr4.1:66714083-66714102 | None:intergenic | 40.0% | |
| AACTACATCTCCAAACAAGG+AGG | - | chr4.1:66716020-66716039 | None:intergenic | 40.0% | |
| AATGGAGTATATCCGTACCA+TGG | - | chr4.1:66714867-66714886 | None:intergenic | 40.0% | |
| ACTAAGTTTCTGTTTGGGAG+GGG | + | chr4.1:66713182-66713201 | MS.gene98326:intron | 40.0% | |
| AGAGATTGGACCACAAGTAA+AGG | + | chr4.1:66713738-66713757 | MS.gene98326:CDS | 40.0% | |
| AGTACACGTAAGCAAAAGTC+GGG | + | chr4.1:66714149-66714168 | MS.gene98326:intron | 40.0% | |
| AGTACATCCAAATTGGCATC+GGG | - | chr4.1:66712836-66712855 | None:intergenic | 40.0% | |
| ATGTAGTGTTTATGAGGGCA+AGG | - | chr4.1:66713375-66713394 | None:intergenic | 40.0% | |
| ATGTCTGGTAGGGTCAAATA+AGG | - | chr4.1:66715879-66715898 | None:intergenic | 40.0% | |
| ATTAACCTTGCCTCCTTGTT+TGG | + | chr4.1:66716007-66716026 | MS.gene98326:intron | 40.0% | |
| CGCTTAACAGTTACAACGAA+TGG | - | chr4.1:66716998-66717017 | None:intergenic | 40.0% | |
| CTACCTACAGCAATTACAAG+CGG | + | chr4.1:66714662-66714681 | MS.gene98326:intron | 40.0% | |
| CTCCATAATTTAGGGACCAT+GGG | - | chr4.1:66715445-66715464 | None:intergenic | 40.0% | |
| CTGAACTTTCACAACCATGA+GGG | - | chr4.1:66716139-66716158 | None:intergenic | 40.0% | |
| CTGGTTTCAGCGAATAAAAG+AGG | - | chr4.1:66714242-66714261 | None:intergenic | 40.0% | |
| CTGTTCAACTTGCCAAACTA+GGG | + | chr4.1:66716690-66716709 | MS.gene98326:CDS | 40.0% | |
| CTTACCACCAACTCATTTGT+GGG | + | chr4.1:66714435-66714454 | MS.gene98326:intron | 40.0% | |
| CTTGACTACAAAACTCCAGA+GGG | + | chr4.1:66716785-66716804 | MS.gene98326:CDS | 40.0% | |
| GACTGAATCTTCCAATCAAC+TGG | - | chr4.1:66712606-66712625 | None:intergenic | 40.0% | |
| GAGAGAGAATGAGTCAAAGA+AGG | + | chr4.1:66714793-66714812 | MS.gene98326:intron | 40.0% | |
| GATGCATATGGACAACATGT+TGG | - | chr4.1:66716316-66716335 | None:intergenic | 40.0% | |
| GTACACGTAAGAAAAAGTCG+GGG | - | chr4.1:66715553-66715572 | None:intergenic | 40.0% | |
| GTTGATTGGAAGATTCAGTC+TGG | + | chr4.1:66712606-66712625 | MS.gene98326:CDS | 40.0% | |
| GTTGTAACTGTTAAGCGTGA+GGG | + | chr4.1:66717001-66717020 | MS.gene98326:CDS | 40.0% | |
| TAACCGCTTGTAATTGCTGT+AGG | - | chr4.1:66714668-66714687 | None:intergenic | 40.0% | |
| TAGGATCAGTCATAGAGTAG+TGG | - | chr4.1:66716362-66716381 | None:intergenic | 40.0% | |
| TATTTGACCCTACCAGACAT+GGG | + | chr4.1:66715879-66715898 | MS.gene98326:intron | 40.0% | |
| TCTCCATAATTTAGGGACCA+TGG | - | chr4.1:66715446-66715465 | None:intergenic | 40.0% | |
| TCTGAACTTTCACAACCATG+AGG | - | chr4.1:66716140-66716159 | None:intergenic | 40.0% | |
| TCTTGACTACAAAACTCCAG+AGG | + | chr4.1:66716784-66716803 | MS.gene98326:CDS | 40.0% | |
| TGAACTTTCACAACCATGAG+GGG | - | chr4.1:66716138-66716157 | None:intergenic | 40.0% | |
| TGATCTTGGGACTTTGATTC+AGG | + | chr4.1:66713691-66713710 | MS.gene98326:intron | 40.0% | |
| TGCATATGGACAACATGTTG+GGG | - | chr4.1:66716314-66716333 | None:intergenic | 40.0% | |
| TGTAGTGTTTATGAGGGCAA+GGG | - | chr4.1:66713374-66713393 | None:intergenic | 40.0% | |
| TGTGTCATACAAGGTATGTG+AGG | - | chr4.1:66712666-66712685 | None:intergenic | 40.0% | |
| TTATTTGACCCTACCAGACA+TGG | + | chr4.1:66715878-66715897 | MS.gene98326:intron | 40.0% | |
| ! | ACCATGGGAGTGTAAAGAAT+GGG | - | chr4.1:66715430-66715449 | None:intergenic | 40.0% |
| ! | GGTATGTGAGGAAATTTTCG+AGG | - | chr4.1:66712654-66712673 | None:intergenic | 40.0% |
| ! | GTCCTTCTGTTAGTTTCAGT+CGG | + | chr4.1:66714078-66714097 | MS.gene98326:intron | 40.0% |
| ! | GTTGATGAGTGTGTCATACA+AGG | - | chr4.1:66712675-66712694 | None:intergenic | 40.0% |
| ! | GTTTGGAGATGTAGTTTGTG+CGG | + | chr4.1:66716024-66716043 | MS.gene98326:intron | 40.0% |
| ! | TTTACCCACAAATGAGTTGG+TGG | - | chr4.1:66714442-66714461 | None:intergenic | 40.0% |
| !! | ACTTCATTGGTCTTTGGAGT+TGG | - | chr4.1:66712552-66712571 | None:intergenic | 40.0% |
| !! | CAGTCATAGAGTAGTGGATT+GGG | - | chr4.1:66716356-66716375 | None:intergenic | 40.0% |
| !! | TCAGTCATAGAGTAGTGGAT+TGG | - | chr4.1:66716357-66716376 | None:intergenic | 40.0% |
| !!! | TACTTTTTCGAAGAAGCGGT+TGG | + | chr4.1:66716970-66716989 | MS.gene98326:CDS | 40.0% |
| AATGGTGAGACCTGTTCAAC+AGG | - | chr4.1:66714493-66714512 | None:intergenic | 45.0% | |
| AATGTTACGAGCACCACAAG+TGG | - | chr4.1:66716732-66716751 | None:intergenic | 45.0% | |
| ACAGGTCTCACCATTTACCA+TGG | + | chr4.1:66714498-66714517 | MS.gene98326:intron | 45.0% | |
| ACATCACTGAAGAGTCCATC+TGG | + | chr4.1:66716809-66716828 | MS.gene98326:CDS | 45.0% | |
| ACATCTCGCTCAACTAGTGA+AGG | + | chr4.1:66717030-66717049 | MS.gene98326:CDS | 45.0% | |
| ACCCATTCTTTACACTCCCA+TGG | + | chr4.1:66715426-66715445 | MS.gene98326:intron | 45.0% | |
| AGATTCAGTCTGGTGCTCTA+AGG | + | chr4.1:66712616-66712635 | MS.gene98326:CDS | 45.0% | |
| AGGTTGAAAGGGAAAAGGGA+GGG | - | chr4.1:66714626-66714645 | None:intergenic | 45.0% | |
| ATCATAGACCAGCCATGGTA+CGG | + | chr4.1:66714852-66714871 | MS.gene98326:intron | 45.0% | |
| ATTTGACCCTACCAGACATG+GGG | + | chr4.1:66715880-66715899 | MS.gene98326:intron | 45.0% | |
| CGTTGTAACTGTTAAGCGTG+AGG | + | chr4.1:66717000-66717019 | MS.gene98326:CDS | 45.0% | |
| CTAAGTTTCTGTTTGGGAGG+GGG | + | chr4.1:66713183-66713202 | MS.gene98326:intron | 45.0% | |
| CTAGCATCAACCCAGTTGAT+TGG | + | chr4.1:66712592-66712611 | MS.gene98326:CDS | 45.0% | |
| CTCCCATGGTCCCTAAATTA+TGG | + | chr4.1:66715440-66715459 | MS.gene98326:intron | 45.0% | |
| CTTCAGTACAGTTCCTATGG+CGG | + | chr4.1:66712374-66712393 | MS.gene98326:CDS | 45.0% | |
| GAACCTGAATCCAGTTCATG+TGG | - | chr4.1:66712970-66712989 | None:intergenic | 45.0% | |
| GAGCAAAGCTGAAGATGCTT+GGG | + | chr4.1:66717093-66717112 | MS.gene98326:CDS | 45.0% | |
| GATTCAGTCTGGTGCTCTAA+GGG | + | chr4.1:66712617-66712636 | MS.gene98326:CDS | 45.0% | |
| GCAGTAATACATTGCACCAC+TGG | + | chr4.1:66716845-66716864 | MS.gene98326:CDS | 45.0% | |
| GCATACACAGTGGTTGTCTA+AGG | + | chr4.1:66715909-66715928 | MS.gene98326:intron | 45.0% | |
| GCATCTTCAGCTTTGCTCAA+AGG | - | chr4.1:66717091-66717110 | None:intergenic | 45.0% | |
| GCTCTTCAGTACAGTTCCTA+TGG | + | chr4.1:66712371-66712390 | MS.gene98326:CDS | 45.0% | |
| GCTGTTCAACTTGCCAAACT+AGG | + | chr4.1:66716689-66716708 | MS.gene98326:CDS | 45.0% | |
| GCTTACCACCAACTCATTTG+TGG | + | chr4.1:66714434-66714453 | MS.gene98326:intron | 45.0% | |
| GGAATTAAGCTTGATGGGAC+TGG | + | chr4.1:66716614-66716633 | MS.gene98326:CDS | 45.0% | |
| GGTGCAAGTTTACCTATTGC+CGG | + | chr4.1:66716557-66716576 | MS.gene98326:CDS | 45.0% | |
| GTACACGTAAGCAAAAGTCG+GGG | + | chr4.1:66714150-66714169 | MS.gene98326:intron | 45.0% | |
| GTTGTCGTGGATTTAACACC+TGG | + | chr4.1:66716911-66716930 | MS.gene98326:CDS | 45.0% | |
| TAAGTTTCTGTTTGGGAGGG+GGG | + | chr4.1:66713184-66713203 | MS.gene98326:intron | 45.0% | |
| TACTTCTTCATTGCCCCTCA+TGG | + | chr4.1:66716122-66716141 | MS.gene98326:intron | 45.0% | |
| TATGCTTGTATCCCCATGTC+TGG | - | chr4.1:66715894-66715913 | None:intergenic | 45.0% | |
| TCACAGGAATAAGGCCATCA+TGG | - | chr4.1:66714397-66714416 | None:intergenic | 45.0% | |
| TGAGCAAAGCTGAAGATGCT+TGG | + | chr4.1:66717092-66717111 | MS.gene98326:CDS | 45.0% | |
| TGCTTATCATAGACCAGCCA+TGG | + | chr4.1:66714847-66714866 | MS.gene98326:intron | 45.0% | |
| TGTGAATGACAGTATGGAGG+TGG | + | chr4.1:66716464-66716483 | MS.gene98326:intron | 45.0% | |
| TTGTATCCCCATGTCTGGTA+GGG | - | chr4.1:66715889-66715908 | None:intergenic | 45.0% | |
| ! | ATGAGATTGGCCGACCAATT+CGG | - | chr4.1:66713004-66713023 | None:intergenic | 45.0% |
| ! | ATGGGAGTGTAAAGAATGGG+TGG | - | chr4.1:66715427-66715446 | None:intergenic | 45.0% |
| ! | CTGATTCGAGCGACCAAATT+GGG | + | chr4.1:66715716-66715735 | MS.gene98326:intron | 45.0% |
| ! | GACCATGGGAGTGTAAAGAA+TGG | - | chr4.1:66715431-66715450 | None:intergenic | 45.0% |
| ! | TAGGTTGAAAGGGAAAAGGG+AGG | - | chr4.1:66714627-66714646 | None:intergenic | 45.0% |
| ! | TCCAAATTGGCATCGGGAAA+CGG | - | chr4.1:66712830-66712849 | None:intergenic | 45.0% |
| ! | TCTGATTCGAGCGACCAAAT+TGG | + | chr4.1:66715715-66715734 | MS.gene98326:intron | 45.0% |
| ! | TGGCGAGCAGAAGAATGTTT+TGG | + | chr4.1:66716634-66716653 | MS.gene98326:CDS | 45.0% |
| !! | AGTATTGATGGCCATGCTAC+TGG | + | chr4.1:66717121-66717140 | MS.gene98326:CDS | 45.0% |
| !! | GCTTGGGCTAAGAGTATTGA+TGG | + | chr4.1:66717109-66717128 | MS.gene98326:CDS | 45.0% |
| !! | GTTTTGGTAACTGCTGCTTC+AGG | + | chr4.1:66716650-66716669 | MS.gene98326:CDS | 45.0% |
| !! | TTGGTCTTTGGAGTTGGTAC+AGG | - | chr4.1:66712546-66712565 | None:intergenic | 45.0% |
| !! | ATTATTATTATTAAATATTG+TGG | - | chr4.1:66714695-66714714 | None:intergenic | 5.0% |
| !! | TTATTATTATTAAATATTGT+GGG | - | chr4.1:66714694-66714713 | None:intergenic | 5.0% |
| AACAACATGGAGTGGAGCTG+TGG | + | chr4.1:66715800-66715819 | MS.gene98326:intron | 50.0% | |
| AACTGTTAAGCGTGAGGGCT+TGG | + | chr4.1:66717006-66717025 | MS.gene98326:CDS | 50.0% | |
| AGTGTTTATGAGGGCAAGGG+AGG | - | chr4.1:66713371-66713390 | None:intergenic | 50.0% | |
| AGTTGACCACGGTATTCCAG+TGG | - | chr4.1:66716864-66716883 | None:intergenic | 50.0% | |
| ATTGCACCACTGGAATACCG+TGG | + | chr4.1:66716855-66716874 | MS.gene98326:CDS | 50.0% | |
| CACGTGGTTGTTCCCTAGTT+TGG | - | chr4.1:66716705-66716724 | None:intergenic | 50.0% | |
| CATCTCCAAACAAGGAGGCA+AGG | - | chr4.1:66716015-66716034 | None:intergenic | 50.0% | |
| CTCGCTCAACTAGTGAAGGA+TGG | + | chr4.1:66717034-66717053 | MS.gene98326:CDS | 50.0% | |
| CTCTTCAGTGATGTTCCCTC+TGG | - | chr4.1:66716803-66716822 | None:intergenic | 50.0% | |
| CTTGAGAAGCAGCACACTCA+AGG | - | chr4.1:66712788-66712807 | None:intergenic | 50.0% | |
| CTTGTATCCCCATGTCTGGT+AGG | - | chr4.1:66715890-66715909 | None:intergenic | 50.0% | |
| GAAGGTAAGGTTAGAGGCAG+AGG | - | chr4.1:66716085-66716104 | None:intergenic | 50.0% | |
| GAGTATATCCGTACCATGGC+TGG | - | chr4.1:66714863-66714882 | None:intergenic | 50.0% | |
| GAGTGAAAAAGGGGTTGTCG+TGG | + | chr4.1:66716898-66716917 | MS.gene98326:CDS | 50.0% | |
| GGAGTGTAAAGAATGGGTGG+TGG | - | chr4.1:66715424-66715443 | None:intergenic | 50.0% | |
| GGGGATACAAGCATACACAG+TGG | + | chr4.1:66715899-66715918 | MS.gene98326:intron | 50.0% | |
| GTAAGGTTAGAGGCAGAGGA+AGG | - | chr4.1:66716081-66716100 | None:intergenic | 50.0% | |
| GTCAACATTGAACTTGGGCC+AGG | - | chr4.1:66716932-66716951 | None:intergenic | 50.0% | |
| GTGTTTATGAGGGCAAGGGA+GGG | - | chr4.1:66713370-66713389 | None:intergenic | 50.0% | |
| TGGTTCCCAGATGCGCAAAA+TGG | - | chr4.1:66715125-66715144 | None:intergenic | 50.0% | |
| TGTTAAGCTCTCGCTAGCCA+CGG | - | chr4.1:66716504-66716523 | None:intergenic | 50.0% | |
| TGTTTATGAGGGCAAGGGAG+GGG | - | chr4.1:66713369-66713388 | None:intergenic | 50.0% | |
| ! | AAAGGGAAAAGGGAGGGCAT+TGG | - | chr4.1:66714620-66714639 | None:intergenic | 50.0% |
| ! | CCAAATTGGCATCGGGAAAC+GGG | - | chr4.1:66712829-66712848 | None:intergenic | 50.0% |
| ! | TGCACATGAGCACCGTGAAA+GGG | - | chr4.1:66713942-66713961 | None:intergenic | 50.0% |
| ! | TGGGTCCATTTTGCGCATCT+GGG | + | chr4.1:66715117-66715136 | MS.gene98326:intron | 50.0% |
| ! | TTGCACATGAGCACCGTGAA+AGG | - | chr4.1:66713943-66713962 | None:intergenic | 50.0% |
| ! | TTGGGTCCATTTTGCGCATC+TGG | + | chr4.1:66715116-66715135 | MS.gene98326:intron | 50.0% |
| ! | TTGGTAACTGCTGCTTCAGG+TGG | + | chr4.1:66716653-66716672 | MS.gene98326:CDS | 50.0% |
| !! | CTTGAGTGTGCTGCTTCTCA+AGG | + | chr4.1:66712786-66712805 | MS.gene98326:intron | 50.0% |
| !! | GATTCAGGCACTGATGTAGC+AGG | + | chr4.1:66713706-66713725 | MS.gene98326:intron | 50.0% |
| !! | TAAGAGCTTAGGTGCTGACG+AGG | + | chr4.1:66716760-66716779 | MS.gene98326:CDS | 50.0% |
| AACATGGAGTGGAGCTGTGG+AGG | + | chr4.1:66715803-66715822 | MS.gene98326:intron | 55.0% | |
| AACCACGTGACAGCCACTTG+TGG | + | chr4.1:66716716-66716735 | MS.gene98326:CDS | 55.0% | |
| AGCTGAGACTTCAGGTGGTC+TGG | - | chr4.1:66716531-66716550 | None:intergenic | 55.0% | |
| CACTGATGTAGCAGGAGAGG+TGG | + | chr4.1:66713714-66713733 | MS.gene98326:CDS | 55.0% | |
| CAGTACAGTTCCTATGGCGG+AGG | + | chr4.1:66712377-66712396 | MS.gene98326:CDS | 55.0% | |
| CCCGTTTCCCGATGCCAATT+TGG | + | chr4.1:66712826-66712845 | MS.gene98326:intron | 55.0% | |
| CCTGAAGTCTCAGCTGCTGA+AGG | + | chr4.1:66716536-66716555 | MS.gene98326:CDS | 55.0% | |
| CCTTCAGCAGCTGAGACTTC+AGG | - | chr4.1:66716539-66716558 | None:intergenic | 55.0% | |
| CGGAGGAGTCTCTGGATTGA+AGG | + | chr4.1:66712394-66712413 | MS.gene98326:CDS | 55.0% | |
| CGTGACGCCCTCACAGAAAT+TGG | + | chr4.1:66716590-66716609 | MS.gene98326:CDS | 55.0% | |
| GACGCCCTCACAGAAATTGG+AGG | + | chr4.1:66716593-66716612 | MS.gene98326:CDS | 55.0% | |
| GCAGGAGAGGTGGTAGAGAT+TGG | + | chr4.1:66713724-66713743 | MS.gene98326:CDS | 55.0% | |
| TCAGCAGCTGAGACTTCAGG+TGG | - | chr4.1:66716536-66716555 | None:intergenic | 55.0% | |
| ! | ACTGCTGCTTCAGGTGGTGT+AGG | + | chr4.1:66716659-66716678 | MS.gene98326:CDS | 55.0% |
| ! | CAGAGATGGGGGCATGAGAT+TGG | - | chr4.1:66713017-66713036 | None:intergenic | 55.0% |
| ! | TCTGTTTGGGAGGGGGGTTT+TGG | + | chr4.1:66713190-66713209 | MS.gene98326:intron | 55.0% |
| !! | AGGCACTGATGTAGCAGGAG+AGG | + | chr4.1:66713711-66713730 | MS.gene98326:intron | 55.0% |
| !! | GTGCTGCTTCTCAAGGTCTC+AGG | + | chr4.1:66712793-66712812 | MS.gene98326:intron | 55.0% |
| !! | TGGACTAGCTGAGTTTGCCG+TGG | + | chr4.1:66716484-66716503 | MS.gene98326:CDS | 55.0% |
| !!! | TTTGGGAGGGGGGTTTTGGA+GGG | + | chr4.1:66713194-66713213 | MS.gene98326:intron | 55.0% |
| CACCACAAGTGGCTGTCACG+TGG | - | chr4.1:66716721-66716740 | None:intergenic | 60.0% | |
| CGAGCTGTGAGACCGGCAAT+AGG | - | chr4.1:66716572-66716591 | None:intergenic | 60.0% | |
| TATGAGGGCAAGGGAGGGGA+GGG | - | chr4.1:66713365-66713384 | None:intergenic | 60.0% | |
| TCCAGAGACTCCTCCGCCAT+AGG | - | chr4.1:66712390-66712409 | None:intergenic | 60.0% | |
| TTATGAGGGCAAGGGAGGGG+AGG | - | chr4.1:66713366-66713385 | None:intergenic | 60.0% | |
| ! | TCCTATGGCGGAGGAGTCTC+TGG | + | chr4.1:66712386-66712405 | MS.gene98326:CDS | 60.0% |
| !! | GTTTGGGAGGGGGGTTTTGG+AGG | + | chr4.1:66713193-66713212 | MS.gene98326:intron | 60.0% |
| GGCGTCACGAGCTGTGAGAC+CGG | - | chr4.1:66716579-66716598 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 66712350 | 66717165 | 66712350 | ID=MS.gene98326 |
| chr4.1 | mRNA | 66712350 | 66717165 | 66712350 | ID=MS.gene98326.t1;Parent=MS.gene98326 |
| chr4.1 | exon | 66712350 | 66712415 | 66712350 | ID=MS.gene98326.t1.exon1;Parent=MS.gene98326.t1 |
| chr4.1 | CDS | 66712350 | 66712415 | 66712350 | ID=cds.MS.gene98326.t1;Parent=MS.gene98326.t1 |
| chr4.1 | exon | 66712531 | 66712675 | 66712531 | ID=MS.gene98326.t1.exon2;Parent=MS.gene98326.t1 |
| chr4.1 | CDS | 66712531 | 66712675 | 66712531 | ID=cds.MS.gene98326.t1;Parent=MS.gene98326.t1 |
| chr4.1 | exon | 66713713 | 66713804 | 66713713 | ID=MS.gene98326.t1.exon3;Parent=MS.gene98326.t1 |
| chr4.1 | CDS | 66713713 | 66713804 | 66713713 | ID=cds.MS.gene98326.t1;Parent=MS.gene98326.t1 |
| chr4.1 | exon | 66716476 | 66717165 | 66716476 | ID=MS.gene98326.t1.exon4;Parent=MS.gene98326.t1 |
| chr4.1 | CDS | 66716476 | 66717165 | 66716476 | ID=cds.MS.gene98326.t1;Parent=MS.gene98326.t1 |
| Gene Sequence |
| Protein sequence |
