Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99820.t1 | XP_003596634.1 | 96.2 | 450 | 17 | 0 | 38 | 487 | 74 | 523 | 1.60E-233 | 818.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99820.t1 | Q6NQ81 | 37.6 | 290 | 180 | 1 | 72 | 360 | 95 | 384 | 2.2e-50 | 201.4 |
| MS.gene99820.t1 | Q6NQ81 | 35.0 | 140 | 84 | 1 | 352 | 484 | 602 | 741 | 4.1e-12 | 74.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99820.t1 | G7IJL5 | 96.2 | 450 | 17 | 0 | 38 | 487 | 74 | 523 | 1.2e-233 | 818.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049404 | MS.gene99820 | 0.821069 | 4.91E-53 | -1.69E-46 |
| MS.gene049435 | MS.gene99820 | 0.814986 | 1.17E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene99820 | 0.820469 | 6.75E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene99820 | 0.815958 | 7.08E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene99820 | 0.810105 | 1.36E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene99820 | 0.805597 | 1.24E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene99820 | 0.801793 | 7.62E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene99820 | 0.82245 | 2.35E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene99820 | 0.801459 | 8.92E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene99820 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene053054 | MS.gene99820 | -0.809279 | 2.05E-50 | -1.69E-46 |
| MS.gene053154 | MS.gene99820 | 0.809778 | 1.60E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene99820 | 0.814412 | 1.56E-51 | -1.69E-46 |
| MS.gene053883 | MS.gene99820 | 0.81065 | 1.04E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene99820 | 0.814563 | 1.45E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene99820 | 0.835578 | 1.55E-56 | -1.69E-46 |
| MS.gene054236 | MS.gene99820 | 0.811851 | 5.69E-51 | -1.69E-46 |
| MS.gene054467 | MS.gene99820 | 0.807432 | 5.07E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene99820 | 0.804699 | 1.91E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene99820 | 0.800409 | 1.46E-48 | -1.69E-46 |
| MS.gene055357 | MS.gene99820 | 0.802926 | 4.45E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene99820 | 0.806276 | 8.90E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene99820 | 0.816658 | 4.94E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene99820 | 0.805987 | 1.02E-49 | -1.69E-46 |
| MS.gene057414 | MS.gene99820 | 0.833346 | 5.62E-56 | -1.69E-46 |
| MS.gene057444 | MS.gene99820 | 0.82751 | 1.50E-54 | -1.69E-46 |
| MS.gene058636 | MS.gene99820 | 0.804946 | 1.69E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene99820 | -0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene99820 | 0.821645 | 3.62E-53 | -1.69E-46 |
| MS.gene060572 | MS.gene99820 | 0.811464 | 6.91E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99820.t1 | MTR_2g082940 | 96.222 | 450 | 17 | 0 | 38 | 487 | 74 | 523 | 0.0 | 869 |
| MS.gene99820.t1 | MTR_2g082940 | 96.907 | 291 | 9 | 0 | 38 | 328 | 74 | 364 | 0.0 | 582 |
| MS.gene99820.t1 | MTR_4g081220 | 49.701 | 334 | 168 | 0 | 31 | 364 | 72 | 405 | 8.70e-103 | 327 |
| MS.gene99820.t1 | MTR_4g081220 | 41.053 | 95 | 56 | 0 | 387 | 481 | 663 | 757 | 4.61e-15 | 78.6 |
| MS.gene99820.t1 | MTR_7g007510 | 40.728 | 302 | 163 | 6 | 70 | 361 | 49 | 344 | 4.02e-60 | 209 |
| MS.gene99820.t1 | MTR_4g081210 | 48.198 | 222 | 112 | 1 | 85 | 306 | 91 | 309 | 7.83e-60 | 205 |
| MS.gene99820.t1 | MTR_7g025530 | 46.073 | 191 | 95 | 5 | 175 | 361 | 13 | 199 | 2.66e-38 | 148 |
| MS.gene99820.t1 | MTR_7g025580 | 42.857 | 217 | 115 | 6 | 150 | 361 | 91 | 303 | 5.67e-38 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99820.t1 | AT4G04790 | 40.345 | 290 | 172 | 1 | 72 | 360 | 95 | 384 | 1.03e-65 | 227 |
| MS.gene99820.t1 | AT4G04790 | 37.398 | 123 | 77 | 0 | 363 | 485 | 620 | 742 | 1.57e-14 | 77.0 |
| MS.gene99820.t1 | AT4G04790 | 40.345 | 290 | 172 | 1 | 72 | 360 | 91 | 380 | 1.37e-65 | 226 |
| MS.gene99820.t1 | AT4G04790 | 37.398 | 123 | 77 | 0 | 363 | 485 | 616 | 738 | 1.79e-14 | 76.6 |
| MS.gene99820.t1 | AT4G21880 | 38.754 | 289 | 175 | 2 | 74 | 361 | 74 | 361 | 2.10e-59 | 209 |
| MS.gene99820.t1 | AT4G21880 | 28.079 | 203 | 132 | 3 | 279 | 481 | 526 | 714 | 8.15e-15 | 77.8 |
| MS.gene99820.t1 | AT4G21880 | 38.754 | 289 | 175 | 2 | 74 | 361 | 118 | 405 | 3.20e-59 | 209 |
| MS.gene99820.t1 | AT4G21880 | 28.079 | 203 | 132 | 3 | 279 | 481 | 570 | 758 | 7.62e-15 | 77.8 |
| MS.gene99820.t1 | AT4G04790 | 40.329 | 243 | 145 | 0 | 118 | 360 | 5 | 247 | 3.09e-55 | 196 |
| MS.gene99820.t1 | AT4G04790 | 37.398 | 123 | 77 | 0 | 363 | 485 | 483 | 605 | 2.28e-14 | 76.3 |
Find 84 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGCAGAAAATTATTTAT+TGG | 0.184539 | 2.3:+14666777 | MS.gene99820:intron |
| GAATCATCTTGTGTTGTATT+TGG | 0.186903 | 2.3:+14669068 | MS.gene99820:CDS |
| GGGCGATATGTTTGCTCTTC+TGG | 0.189121 | 2.3:-14666020 | None:intergenic |
| TGAACGGAAGGAGAATATTT+TGG | 0.198209 | 2.3:+14666813 | MS.gene99820:CDS |
| CTCTATAGCGAAGGTATTTC+AGG | 0.204333 | 2.3:+14666879 | MS.gene99820:CDS |
| GTATTTGGAATAAGCGTTTA+AGG | 0.226232 | 2.3:+14669083 | MS.gene99820:CDS |
| GTTCCTTCATTAAATCAAAA+AGG | 0.268049 | 2.3:-14665986 | None:intergenic |
| CACTTGCTTTGAAGTCTAAA+AGG | 0.279870 | 2.3:-14666942 | None:intergenic |
| GCATCAACTTTCTCGGTATC+AGG | 0.309961 | 2.3:-14665642 | None:intergenic |
| ACCCAGTCTTGCAGTTGAAT+TGG | 0.318926 | 2.3:-14666120 | None:intergenic |
| GACATTGCAATTGAAGAAAT+GGG | 0.333617 | 2.3:+14665951 | MS.gene99820:CDS |
| AGACATTGCAATTGAAGAAA+TGG | 0.334762 | 2.3:+14665950 | MS.gene99820:CDS |
| TCCCAATTCAACTGCAAGAC+TGG | 0.342568 | 2.3:+14666118 | MS.gene99820:CDS |
| GATTTCCTTACCGATAAATC+TGG | 0.343525 | 2.3:-14667334 | None:intergenic |
| TTTGGAGGTGTTGGAAATCA+TGG | 0.355242 | 2.3:+14666831 | MS.gene99820:CDS |
| CATGCAAGTTTGCCGATGAT+TGG | 0.365015 | 2.3:-14669823 | None:intergenic |
| GGCATTGGGAAGACTACTAT+TGG | 0.381092 | 2.3:+14666900 | MS.gene99820:CDS |
| CTTCATCGAAACTCTGATTC+AGG | 0.384389 | 2.3:+14664636 | MS.gene99820:CDS |
| TGAAGGATAAGCTTGGTCTT+TGG | 0.385335 | 2.3:+14669862 | MS.gene99820:CDS |
| AACTAAATGATACATCCTAT+TGG | 0.386920 | 2.3:+14669029 | MS.gene99820:CDS |
| TATGAATGTTCTCTTTGATA+AGG | 0.386943 | 2.3:+14669255 | MS.gene99820:CDS |
| ATTTGCAGCATCAACTTTCT+CGG | 0.387502 | 2.3:-14665649 | None:intergenic |
| AGCATTATGTGAATTATCAT+TGG | 0.388644 | 2.3:-14669931 | None:intergenic |
| CCCAGTCTTGCAGTTGAATT+GGG | 0.389256 | 2.3:-14666119 | None:intergenic |
| AGTCAGCATTCCAGATTTAT+CGG | 0.389720 | 2.3:+14667324 | MS.gene99820:CDS |
| TAAGTTACAAATTGATGAAC+TGG | 0.393574 | 2.3:+14669231 | MS.gene99820:CDS |
| ATATTACTCTGAGGTACGTT+TGG | 0.413517 | 2.3:-14665705 | None:intergenic |
| TTGGTGTTCTTGAAGGTTGA+GGG | 0.422482 | 2.3:+14668518 | MS.gene99820:intron |
| AATTGTTAGCGTCATGTTAG+TGG | 0.422488 | 2.3:+14665321 | MS.gene99820:intron |
| AGCGAAGGTATTTCAGGCAT+TGG | 0.426028 | 2.3:+14666885 | MS.gene99820:CDS |
| CCTTGAGTTGTTTGATAAAG+TGG | 0.426773 | 2.3:+14665851 | MS.gene99820:CDS |
| TTTCAATTAAGCGGCGAAAA+CGG | 0.431589 | 2.3:-14665797 | None:intergenic |
| AAAAGGAGCTCCTCTGCAAC+AGG | 0.440881 | 2.3:-14666925 | None:intergenic |
| GCGAAGGTATTTCAGGCATT+GGG | 0.450482 | 2.3:+14666886 | MS.gene99820:CDS |
| CAGAGTTTCGATGAAGGTTG+AGG | 0.470953 | 2.3:-14664629 | None:intergenic |
| GAAAGTTGTGCAAAGATACT+AGG | 0.472120 | 2.3:+14665816 | MS.gene99820:CDS |
| GGGAGGCATAAATAAATTCA+AGG | 0.475927 | 2.3:+14668538 | MS.gene99820:CDS |
| GCAGCAAGCATCATTCCAAT+AGG | 0.477176 | 2.3:-14669044 | None:intergenic |
| CCCAATTCAACTGCAAGACT+GGG | 0.500332 | 2.3:+14666119 | MS.gene99820:CDS |
| AAATTTGCATGGGTAAAGCT+AGG | 0.502554 | 2.3:+14665913 | MS.gene99820:CDS |
| GCATTGTATCCTTTCACGCC+TGG | 0.508185 | 2.3:-14665882 | None:intergenic |
| CCACTTTATCAAACAACTCA+AGG | 0.516462 | 2.3:-14665851 | None:intergenic |
| TTAGAAATGAAGGATAAGCT+TGG | 0.520450 | 2.3:+14669855 | MS.gene99820:CDS |
| CTGAATCAGAGTTTCGATGA+AGG | 0.521340 | 2.3:-14664635 | None:intergenic |
| TGCAATTGAAGAAATGGGGA+AGG | 0.531771 | 2.3:+14665956 | MS.gene99820:CDS |
| CTGTCATATTATCAAAGAAG+AGG | 0.532204 | 2.3:+14666094 | MS.gene99820:CDS |
| TGATTTGTGTAAGCTTCTCA+AGG | 0.534047 | 2.3:+14669207 | MS.gene99820:CDS |
| TCAATTGTATACAAAAGAAG+TGG | 0.536661 | 2.3:-14666041 | None:intergenic |
| CAATCATCGGCAAACTTGCA+TGG | 0.537585 | 2.3:+14669824 | MS.gene99820:CDS |
| TGGCTCTTTGTGAGAGTGAA+CGG | 0.537633 | 2.3:+14666797 | MS.gene99820:CDS |
| TGCATTGGTAGAAATTTGCA+TGG | 0.541268 | 2.3:+14665902 | MS.gene99820:CDS |
| AATTCACATAATGCTGAATG+AGG | 0.542846 | 2.3:+14669939 | MS.gene99820:CDS |
| ACACTTACCGTAGAAAATAG+AGG | 0.544534 | 2.3:-14664895 | None:intergenic |
| GTATACAATTGACATGGGTA+TGG | 0.544759 | 2.3:+14666052 | MS.gene99820:CDS |
| CTTGAGTTGTTTGATAAAGT+GGG | 0.545096 | 2.3:+14665852 | MS.gene99820:CDS |
| TTGCACAACTTTCAATTAAG+CGG | 0.546213 | 2.3:-14665806 | None:intergenic |
| GGACGAAAACCAGGCGTGAA+AGG | 0.549368 | 2.3:+14665873 | MS.gene99820:CDS |
| ATCTGTTGGCTCTATAGCGA+AGG | 0.552442 | 2.3:+14666870 | MS.gene99820:CDS |
| GATAAAGTGGGACGAAAACC+AGG | 0.553212 | 2.3:+14665864 | MS.gene99820:CDS |
| AATTTGCATGGGTAAAGCTA+GGG | 0.557559 | 2.3:+14665914 | MS.gene99820:CDS |
| TTATCATTGGCATTTGCAGA+AGG | 0.563671 | 2.3:-14669918 | None:intergenic |
| TTCTCATATGACGAGGAAGA+AGG | 0.564646 | 2.3:-14668587 | None:intergenic |
| TCAATTGCTTCTGCTACTTG+AGG | 0.571404 | 2.3:+14669006 | MS.gene99820:CDS |
| ACGTAACTGTGCATTGCTCA+AGG | 0.571959 | 2.3:+14668619 | MS.gene99820:CDS |
| GATGAAGGTTGAGGCTTGCG+AGG | 0.573152 | 2.3:-14664620 | None:intergenic |
| GACTGTGTAACTAGCAATGA+AGG | 0.573585 | 2.3:-14667305 | None:intergenic |
| TAGGAGCACACTTGTTCCGA+TGG | 0.579047 | 2.3:+14668974 | MS.gene99820:intron |
| GTGTTCTTGAAGGTTGAGGG+AGG | 0.593561 | 2.3:+14668521 | MS.gene99820:intron |
| CGTGAAAGGATACAATGCAT+TGG | 0.602128 | 2.3:+14665887 | MS.gene99820:CDS |
| AGAGTAATATATCATTGCGA+AGG | 0.611702 | 2.3:+14665718 | MS.gene99820:CDS |
| AAGAGTCAGAAACCAATCAT+CGG | 0.615923 | 2.3:+14669811 | MS.gene99820:CDS |
| TGCAGATGAATTGTCTGAAG+CGG | 0.616945 | 2.3:+14664857 | MS.gene99820:intron |
| CAATTGATCGAACTCTCCAT+CGG | 0.626889 | 2.3:-14668990 | None:intergenic |
| TCTTTGTGAGAGTGAACGGA+AGG | 0.632162 | 2.3:+14666801 | MS.gene99820:CDS |
| TTTGATTTAATGAAGGAACA+AGG | 0.634361 | 2.3:+14665990 | MS.gene99820:CDS |
| CAATTGTATACAAAAGAAGT+GGG | 0.639916 | 2.3:-14666040 | None:intergenic |
| ACTATTGGAACCTGTTGCAG+AGG | 0.644044 | 2.3:+14666915 | MS.gene99820:CDS |
| CGCAATGATATATTACTCTG+AGG | 0.647892 | 2.3:-14665714 | None:intergenic |
| GCATTGGTAGAAATTTGCAT+GGG | 0.653918 | 2.3:+14665903 | MS.gene99820:CDS |
| ACATTGCAATTGAAGAAATG+GGG | 0.655227 | 2.3:+14665952 | MS.gene99820:CDS |
| GTTACTATGAAATGATGCTG+TGG | 0.658555 | 2.3:+14666141 | MS.gene99820:CDS |
| TGCAAAGATACTAGGAACTG+AGG | 0.673859 | 2.3:+14665824 | MS.gene99820:CDS |
| CACTTTATCAAACAACTCAA+GGG | 0.689617 | 2.3:-14665850 | None:intergenic |
| AATGAGCTTCTCATATGACG+AGG | 0.715279 | 2.3:-14668594 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAGTTAATTTATTCAT+AGG | - | chr2.3:14665249-14665268 | None:intergenic | 10.0% |
| !!! | AATAAAAACTGAATTTTTTT+TGG | + | chr2.3:14664702-14664721 | MS.gene99820:intron | 10.0% |
| !!! | ATAAAAACTGAATTTTTTTT+GGG | + | chr2.3:14664703-14664722 | MS.gene99820:intron | 10.0% |
| !! | ATATTGAAGAAAAAAAATCT+GGG | + | chr2.3:14664765-14664784 | MS.gene99820:intron | 15.0% |
| !! | TAATAATGAAGAAAAAATTC+AGG | + | chr2.3:14666172-14666191 | MS.gene99820:CDS | 15.0% |
| !! | TATATTGAAGAAAAAAAATC+TGG | + | chr2.3:14664764-14664783 | MS.gene99820:intron | 15.0% |
| !!! | TAATTTTCTTACAAATGTAA+TGG | - | chr2.3:14666488-14666507 | None:intergenic | 15.0% |
| !!! | TTTTTATTTTACACTAACAT+TGG | + | chr2.3:14669116-14669135 | MS.gene99820:intron | 15.0% |
| !! | AGGAAGATAAAGTAAATTTA+TGG | - | chr2.3:14668838-14668857 | None:intergenic | 20.0% |
| !! | AGGTAAAAAATTATAGAGAA+AGG | - | chr2.3:14667225-14667244 | None:intergenic | 20.0% |
| !! | ATAGTTAATTTATTCATAGG+AGG | - | chr2.3:14665246-14665265 | None:intergenic | 20.0% |
| !! | ATATACACAACTTACTTTAA+TGG | - | chr2.3:14668784-14668803 | None:intergenic | 20.0% |
| !! | ATGAACTGTAATTAATATAG+TGG | - | chr2.3:14664670-14664689 | None:intergenic | 20.0% |
| !! | GAAGATAAAGTAAATTTATG+GGG | - | chr2.3:14668836-14668855 | None:intergenic | 20.0% |
| !! | GCATTAATTGACATAAATTA+AGG | + | chr2.3:14667083-14667102 | MS.gene99820:intron | 20.0% |
| !! | GGAAGATAAAGTAAATTTAT+GGG | - | chr2.3:14668837-14668856 | None:intergenic | 20.0% |
| !! | GGTAAAAAATTATAGAGAAA+GGG | - | chr2.3:14667224-14667243 | None:intergenic | 20.0% |
| !! | TAAGTTGTGTATATTTAAGT+TGG | + | chr2.3:14668790-14668809 | MS.gene99820:intron | 20.0% |
| !! | TCATACAATTTGCATAAAAA+GGG | - | chr2.3:14669293-14669312 | None:intergenic | 20.0% |
| !! | TGTTGCAGAAAATTATTTAT+TGG | + | chr2.3:14666777-14666796 | MS.gene99820:intron | 20.0% |
| !! | TTCATACAATTTGCATAAAA+AGG | - | chr2.3:14669294-14669313 | None:intergenic | 20.0% |
| !!! | AAGTTGTGTATATTTAAGTT+GGG | + | chr2.3:14668791-14668810 | MS.gene99820:intron | 20.0% |
| !!! | GTTTGTCATAATTTATTTCT+TGG | + | chr2.3:14666286-14666305 | MS.gene99820:intron | 20.0% |
| !!! | GTTTTTAGAGTTTATTATGA+TGG | + | chr2.3:14667179-14667198 | MS.gene99820:intron | 20.0% |
| !!! | TAATTTTCTGCAACATAAAT+TGG | - | chr2.3:14666772-14666791 | None:intergenic | 20.0% |
| !!! | TATCTTTCTTTTTATAGACA+AGG | - | chr2.3:14668690-14668709 | None:intergenic | 20.0% |
| !!! | TTAACAGATATTTTGTTTCA+AGG | + | chr2.3:14666724-14666743 | MS.gene99820:intron | 20.0% |
| ! | AAACATGCATGTTTCAAAAT+TGG | + | chr2.3:14666629-14666648 | MS.gene99820:intron | 25.0% |
| ! | AACTAAATGATACATCCTAT+TGG | + | chr2.3:14669029-14669048 | MS.gene99820:CDS | 25.0% |
| ! | AAGAAAGATAATCTAGTACT+CGG | + | chr2.3:14668700-14668719 | MS.gene99820:intron | 25.0% |
| ! | ACAATAACCATTAACGTAAT+TGG | - | chr2.3:14664744-14664763 | None:intergenic | 25.0% |
| ! | AGCATTATGTGAATTATCAT+TGG | - | chr2.3:14669934-14669953 | None:intergenic | 25.0% |
| ! | ATAAAAAAGCTTTCATCTGT+TGG | + | chr2.3:14666856-14666875 | MS.gene99820:CDS | 25.0% |
| ! | ATCTCACTAAAATATGTACA+AGG | - | chr2.3:14667245-14667264 | None:intergenic | 25.0% |
| ! | CAATTGTATACAAAAGAAGT+GGG | - | chr2.3:14666043-14666062 | None:intergenic | 25.0% |
| ! | CTTGTATTGTAGATTTATGT+TGG | + | chr2.3:14668249-14668268 | MS.gene99820:intron | 25.0% |
| ! | GTATTGTTCTTACTTATTTC+AGG | + | chr2.3:14665600-14665619 | MS.gene99820:intron | 25.0% |
| ! | GTTCCTTCATTAAATCAAAA+AGG | - | chr2.3:14665989-14666008 | None:intergenic | 25.0% |
| ! | GTTTCTACTCAATATAAATC+AGG | - | chr2.3:14668300-14668319 | None:intergenic | 25.0% |
| ! | TAAGTTACAAATTGATGAAC+TGG | + | chr2.3:14669231-14669250 | MS.gene99820:CDS | 25.0% |
| ! | TAGAGTTTATTATGATGGTA+TGG | + | chr2.3:14667184-14667203 | MS.gene99820:intron | 25.0% |
| ! | TATGAATGTTCTCTTTGATA+AGG | + | chr2.3:14669255-14669274 | MS.gene99820:CDS | 25.0% |
| ! | TCAATTGTATACAAAAGAAG+TGG | - | chr2.3:14666044-14666063 | None:intergenic | 25.0% |
| !! | AAATCTGTTTGTCATGTTTT+TGG | - | chr2.3:14668757-14668776 | None:intergenic | 25.0% |
| !! | AATAAACTCTAAAAACACAC+TGG | - | chr2.3:14667175-14667194 | None:intergenic | 25.0% |
| !! | ATCAAGTAGTATGAGATTTT+CGG | + | chr2.3:14667807-14667826 | MS.gene99820:intron | 25.0% |
| !! | ATTTTTGTCTGCATGATTAT+AGG | + | chr2.3:14669773-14669792 | MS.gene99820:intron | 25.0% |
| !! | CTTTTGTATACAATTGACAT+GGG | + | chr2.3:14666047-14666066 | MS.gene99820:CDS | 25.0% |
| !! | TCAAGAATACATTTTTGACA+AGG | - | chr2.3:14668858-14668877 | None:intergenic | 25.0% |
| !! | TCAGTTTTTATTCATTTTCC+TGG | - | chr2.3:14664694-14664713 | None:intergenic | 25.0% |
| !! | TCTTTTGTATACAATTGACA+TGG | + | chr2.3:14666046-14666065 | MS.gene99820:CDS | 25.0% |
| !! | TTTGATTTAATGAAGGAACA+AGG | + | chr2.3:14665990-14666009 | MS.gene99820:CDS | 25.0% |
| !! | TTTTATTCATGCATGTTCTT+TGG | + | chr2.3:14668426-14668445 | MS.gene99820:intron | 25.0% |
| !!! | AATTTTGAAACATGCATGTT+TGG | - | chr2.3:14666630-14666649 | None:intergenic | 25.0% |
| !!! | ATTTTGACCAATTACGTTAA+TGG | + | chr2.3:14664734-14664753 | MS.gene99820:intron | 25.0% |
| !!! | GCTTATGTTGATTTTGATTT+TGG | + | chr2.3:14669171-14669190 | MS.gene99820:intron | 25.0% |
| !!! | TCACCTTTTTGATTTAATGA+AGG | + | chr2.3:14665983-14666002 | MS.gene99820:CDS | 25.0% |
| !!! | TGTATGTTTCTGTTTTGATT+AGG | + | chr2.3:14664939-14664958 | MS.gene99820:intron | 25.0% |
| !!! | TTTCTGTTTTGATTAGGATA+TGG | + | chr2.3:14664945-14664964 | MS.gene99820:intron | 25.0% |
| AACACGATCAAACTTATATG+TGG | + | chr2.3:14669478-14669497 | MS.gene99820:intron | 30.0% | |
| AAGTATGTCCAGTCTTTATA+AGG | + | chr2.3:14669371-14669390 | MS.gene99820:intron | 30.0% | |
| AATCTCATACTACTTGATGT+AGG | - | chr2.3:14667805-14667824 | None:intergenic | 30.0% | |
| ACATTGCAATTGAAGAAATG+GGG | + | chr2.3:14665952-14665971 | MS.gene99820:CDS | 30.0% | |
| ACCTTTGACAAATTTGATTG+TGG | - | chr2.3:14668404-14668423 | None:intergenic | 30.0% | |
| AGAATAGGTCCAAACTTTAA+AGG | - | chr2.3:14667593-14667612 | None:intergenic | 30.0% | |
| AGACATTGCAATTGAAGAAA+TGG | + | chr2.3:14665950-14665969 | MS.gene99820:CDS | 30.0% | |
| AGAGTAATATATCATTGCGA+AGG | + | chr2.3:14665718-14665737 | MS.gene99820:CDS | 30.0% | |
| AGGCTGCAAATATATTTCTT+TGG | + | chr2.3:14667103-14667122 | MS.gene99820:intron | 30.0% | |
| AGTTTATTATGATGGTATGG+AGG | + | chr2.3:14667187-14667206 | MS.gene99820:intron | 30.0% | |
| ATTCATAGGAGGTGAAAAAA+GGG | - | chr2.3:14665235-14665254 | None:intergenic | 30.0% | |
| CACTTTATCAAACAACTCAA+GGG | - | chr2.3:14665853-14665872 | None:intergenic | 30.0% | |
| CTGTCATATTATCAAAGAAG+AGG | + | chr2.3:14666094-14666113 | MS.gene99820:CDS | 30.0% | |
| GAATCATCTTGTGTTGTATT+TGG | + | chr2.3:14669068-14669087 | MS.gene99820:CDS | 30.0% | |
| GACATTGCAATTGAAGAAAT+GGG | + | chr2.3:14665951-14665970 | MS.gene99820:CDS | 30.0% | |
| GCACAAAAACTACAGAATTT+GGG | - | chr2.3:14669450-14669469 | None:intergenic | 30.0% | |
| GTAACACAAAAATGTGAAAC+TGG | - | chr2.3:14667444-14667463 | None:intergenic | 30.0% | |
| GTTTATTATGATGGTATGGA+GGG | + | chr2.3:14667188-14667207 | MS.gene99820:intron | 30.0% | |
| TACACTAATAGTAGTTCAAG+TGG | - | chr2.3:14665583-14665602 | None:intergenic | 30.0% | |
| TAGCGCAAGATTATTCAAAA+TGG | + | chr2.3:14668226-14668245 | MS.gene99820:intron | 30.0% | |
| TATGCTCAAACTTCTATCAT+TGG | + | chr2.3:14666313-14666332 | MS.gene99820:intron | 30.0% | |
| TATTAATTACAGTTCATGCC+AGG | + | chr2.3:14664673-14664692 | MS.gene99820:intron | 30.0% | |
| TATTCATAGGAGGTGAAAAA+AGG | - | chr2.3:14665236-14665255 | None:intergenic | 30.0% | |
| TGAACATCAATGTACAGAAA+AGG | - | chr2.3:14666701-14666720 | None:intergenic | 30.0% | |
| TGCACAAAAACTACAGAATT+TGG | - | chr2.3:14669451-14669470 | None:intergenic | 30.0% | |
| TGCATAAAGTAAGTACTTCA+GGG | - | chr2.3:14667395-14667414 | None:intergenic | 30.0% | |
| TGTTTCATCTGATGTATTGT+TGG | + | chr2.3:14668499-14668518 | MS.gene99820:intron | 30.0% | |
| TTAGAAATGAAGGATAAGCT+TGG | + | chr2.3:14669855-14669874 | MS.gene99820:CDS | 30.0% | |
| TTAGAAGCTAGATATCGAAA+GGG | - | chr2.3:14667860-14667879 | None:intergenic | 30.0% | |
| TTGCACAACTTTCAATTAAG+CGG | - | chr2.3:14665809-14665828 | None:intergenic | 30.0% | |
| TTGTTCTTACTTATTTCAGG+TGG | + | chr2.3:14665603-14665622 | MS.gene99820:intron | 30.0% | |
| ! | ATTATTCTTTTCCAAACCGA+AGG | - | chr2.3:14667000-14667019 | None:intergenic | 30.0% |
| ! | CAGATTTCCTCTATTTTCTA+CGG | + | chr2.3:14664888-14664907 | MS.gene99820:CDS | 30.0% |
| ! | CTTGAGTTGTTTGATAAAGT+GGG | + | chr2.3:14665852-14665871 | MS.gene99820:CDS | 30.0% |
| ! | GAATCGTAACATTTTTGTGA+AGG | - | chr2.3:14669888-14669907 | None:intergenic | 30.0% |
| ! | GTATTTGGAATAAGCGTTTA+AGG | + | chr2.3:14669083-14669102 | MS.gene99820:CDS | 30.0% |
| ! | TATCTTCTTGTTGTAACCTT+CGG | + | chr2.3:14666981-14667000 | MS.gene99820:intron | 30.0% |
| ! | TCTTTTTATAGACAAGGTTC+TGG | - | chr2.3:14668684-14668703 | None:intergenic | 30.0% |
| ! | TTTTGTGATCCTACATCAAT+TGG | + | chr2.3:14669348-14669367 | MS.gene99820:intron | 30.0% |
| !! | GTAGAGTATTTTAAGTAGCT+TGG | + | chr2.3:14667829-14667848 | MS.gene99820:intron | 30.0% |
| !! | TCAGGGTTTAATTTGAGAAT+AGG | - | chr2.3:14667608-14667627 | None:intergenic | 30.0% |
| !!! | CTAACTTTTGGAATTGAGTT+AGG | + | chr2.3:14669418-14669437 | MS.gene99820:intron | 30.0% |
| !!! | GGAGTTGTTTTTAGAAATGA+AGG | + | chr2.3:14669845-14669864 | MS.gene99820:CDS | 30.0% |
| !!! | TCGATTTTTTACACAGAACT+GGG | + | chr2.3:14667644-14667663 | MS.gene99820:intron | 30.0% |
| !!! | TTCGATTTTTTACACAGAAC+TGG | + | chr2.3:14667643-14667662 | MS.gene99820:intron | 30.0% |
| AAAACTACAGAATTTGGGAG+CGG | - | chr2.3:14669445-14669464 | None:intergenic | 35.0% | |
| AAAGAACTGCGTCTATCAAA+AGG | - | chr2.3:14668134-14668153 | None:intergenic | 35.0% | |
| AAATTTGCATGGGTAAAGCT+AGG | + | chr2.3:14665913-14665932 | MS.gene99820:CDS | 35.0% | |
| AACATTGCTGAGTTACTCTA+AGG | - | chr2.3:14665380-14665399 | None:intergenic | 35.0% | |
| AAGAGTCAGAAACCAATCAT+CGG | + | chr2.3:14669811-14669830 | MS.gene99820:CDS | 35.0% | |
| AATTGTTAGCGTCATGTTAG+TGG | + | chr2.3:14665321-14665340 | MS.gene99820:intron | 35.0% | |
| AATTTGCATGGGTAAAGCTA+GGG | + | chr2.3:14665914-14665933 | MS.gene99820:CDS | 35.0% | |
| ACAAGTCAACTTGTATGCTA+TGG | - | chr2.3:14669742-14669761 | None:intergenic | 35.0% | |
| ACACTTACCGTAGAAAATAG+AGG | - | chr2.3:14664898-14664917 | None:intergenic | 35.0% | |
| ACAGAACAGTGACTTTGTTA+TGG | - | chr2.3:14668911-14668930 | None:intergenic | 35.0% | |
| ACATTGCTGAGTTACTCTAA+GGG | - | chr2.3:14665379-14665398 | None:intergenic | 35.0% | |
| ACTGGGATGTATCCTAAAAA+CGG | + | chr2.3:14667661-14667680 | MS.gene99820:intron | 35.0% | |
| AGTCAGCATTCCAGATTTAT+CGG | + | chr2.3:14667324-14667343 | MS.gene99820:CDS | 35.0% | |
| ATACTACTTGATGTAGGACT+TGG | - | chr2.3:14667799-14667818 | None:intergenic | 35.0% | |
| ATTACCAATAACATAAGCGC+AGG | + | chr2.3:14667566-14667585 | MS.gene99820:intron | 35.0% | |
| ATTCCAAAAGTTAGCTCAAG+AGG | - | chr2.3:14669412-14669431 | None:intergenic | 35.0% | |
| ATTTGCAGCATCAACTTTCT+CGG | - | chr2.3:14665652-14665671 | None:intergenic | 35.0% | |
| CATAGTTCCATGTGAACATT+TGG | + | chr2.3:14668378-14668397 | MS.gene99820:intron | 35.0% | |
| CCACTTTATCAAACAACTCA+AGG | - | chr2.3:14665854-14665873 | None:intergenic | 35.0% | |
| CGCAATGATATATTACTCTG+AGG | - | chr2.3:14665717-14665736 | None:intergenic | 35.0% | |
| CTGCATAAAGTAAGTACTTC+AGG | - | chr2.3:14667396-14667415 | None:intergenic | 35.0% | |
| CTTAGAAGCTAGATATCGAA+AGG | - | chr2.3:14667861-14667880 | None:intergenic | 35.0% | |
| GAAACTGGTGATATAGTTCT+AGG | - | chr2.3:14667429-14667448 | None:intergenic | 35.0% | |
| GAAAGTTGTGCAAAGATACT+AGG | + | chr2.3:14665816-14665835 | MS.gene99820:CDS | 35.0% | |
| GAACTTGCGAGTATATGTTA+CGG | - | chr2.3:14666346-14666365 | None:intergenic | 35.0% | |
| GACATACTTCCAATTGATGT+AGG | - | chr2.3:14669360-14669379 | None:intergenic | 35.0% | |
| GATTTCCTTACCGATAAATC+TGG | - | chr2.3:14667337-14667356 | None:intergenic | 35.0% | |
| GCCACAATCAAATTTGTCAA+AGG | + | chr2.3:14668400-14668419 | MS.gene99820:intron | 35.0% | |
| GTATACAATTGACATGGGTA+TGG | + | chr2.3:14666052-14666071 | MS.gene99820:CDS | 35.0% | |
| GTCCAGTCTTTATAAGGATT+AGG | + | chr2.3:14669377-14669396 | MS.gene99820:intron | 35.0% | |
| GTTACTATGAAATGATGCTG+TGG | + | chr2.3:14666141-14666160 | MS.gene99820:CDS | 35.0% | |
| TAAGAAACCTAGAGCAGAAT+TGG | + | chr2.3:14668199-14668218 | MS.gene99820:intron | 35.0% | |
| TACATAGTGTTGTCACATAG+AGG | + | chr2.3:14665469-14665488 | MS.gene99820:intron | 35.0% | |
| TAGAAGCTAGATATCGAAAG+GGG | - | chr2.3:14667859-14667878 | None:intergenic | 35.0% | |
| TGATACAGTGTTGTCAATTG+TGG | - | chr2.3:14669680-14669699 | None:intergenic | 35.0% | |
| TGATGGGACTTAAGTACTAT+GGG | + | chr2.3:14667769-14667788 | MS.gene99820:intron | 35.0% | |
| TGCCTAATCCTTATAAAGAC+TGG | - | chr2.3:14669382-14669401 | None:intergenic | 35.0% | |
| TTATCATTGGCATTTGCAGA+AGG | - | chr2.3:14669921-14669940 | None:intergenic | 35.0% | |
| TTCAATGTTGACAAGAAGCA+TGG | + | chr2.3:14669321-14669340 | MS.gene99820:intron | 35.0% | |
| TTCATAGGAGGTGAAAAAAG+GGG | - | chr2.3:14665234-14665253 | None:intergenic | 35.0% | |
| TTGATGGGACTTAAGTACTA+TGG | + | chr2.3:14667768-14667787 | MS.gene99820:intron | 35.0% | |
| TTTAAGGGACAGTTTCCTAA+GGG | + | chr2.3:14668087-14668106 | MS.gene99820:intron | 35.0% | |
| TTTCAATTAAGCGGCGAAAA+CGG | - | chr2.3:14665800-14665819 | None:intergenic | 35.0% | |
| ! | AACAGTGACTTTGTTATGGA+AGG | - | chr2.3:14668907-14668926 | None:intergenic | 35.0% |
| ! | AACTCGAGTTCTTTTTCTAG+AGG | + | chr2.3:14667699-14667718 | MS.gene99820:intron | 35.0% |
| ! | ACACTCTTTGATGCTTTGTT+CGG | - | chr2.3:14667927-14667946 | None:intergenic | 35.0% |
| ! | ACAGTGACTTTGTTATGGAA+GGG | - | chr2.3:14668906-14668925 | None:intergenic | 35.0% |
| ! | ATAGGGACTTGGATATTTTG+GGG | + | chr2.3:14667983-14668002 | MS.gene99820:intron | 35.0% |
| ! | CCTTGAGTTGTTTGATAAAG+TGG | + | chr2.3:14665851-14665870 | MS.gene99820:CDS | 35.0% |
| ! | CTTTTAGACTTCAAAGCAAG+TGG | + | chr2.3:14666943-14666962 | MS.gene99820:CDS | 35.0% |
| ! | GATAGGGACTTGGATATTTT+GGG | + | chr2.3:14667982-14668001 | MS.gene99820:intron | 35.0% |
| ! | GCATTGGTAGAAATTTGCAT+GGG | + | chr2.3:14665903-14665922 | MS.gene99820:CDS | 35.0% |
| ! | GGGAGGCATAAATAAATTCA+AGG | + | chr2.3:14668538-14668557 | MS.gene99820:CDS | 35.0% |
| ! | TATTTTGTCCGTGTTTTGTG+TGG | + | chr2.3:14666425-14666444 | MS.gene99820:intron | 35.0% |
| ! | TGAACGGAAGGAGAATATTT+TGG | + | chr2.3:14666813-14666832 | MS.gene99820:CDS | 35.0% |
| ! | TGATAGGGACTTGGATATTT+TGG | + | chr2.3:14667981-14668000 | MS.gene99820:intron | 35.0% |
| ! | TGATTTGTGTAAGCTTCTCA+AGG | + | chr2.3:14669207-14669226 | MS.gene99820:CDS | 35.0% |
| ! | TGCATTGGTAGAAATTTGCA+TGG | + | chr2.3:14665902-14665921 | MS.gene99820:CDS | 35.0% |
| ! | TGTATTGTTGGTGTTCTTGA+AGG | + | chr2.3:14668511-14668530 | MS.gene99820:intron | 35.0% |
| ! | TGTTTGGTGGAAAGTTTAAG+TGG | + | chr2.3:14668036-14668055 | MS.gene99820:intron | 35.0% |
| !! | ATATTACTCTGAGGTACGTT+TGG | - | chr2.3:14665708-14665727 | None:intergenic | 35.0% |
| !! | CACTTGCTTTGAAGTCTAAA+AGG | - | chr2.3:14666945-14666964 | None:intergenic | 35.0% |
| !! | CTGTTTTCTTGTTGTCTGAA+AGG | + | chr2.3:14665276-14665295 | MS.gene99820:intron | 35.0% |
| !! | TTTTAAGGGACAGTTTCCTA+AGG | + | chr2.3:14668086-14668105 | MS.gene99820:intron | 35.0% |
| !!! | ACACTTTTGATTTACGAGGT+GGG | + | chr2.3:14666231-14666250 | MS.gene99820:intron | 35.0% |
| AAACTACAGAATTTGGGAGC+GGG | - | chr2.3:14669444-14669463 | None:intergenic | 40.0% | |
| AAGTAGCATAGGATGTTTGG+TGG | + | chr2.3:14668023-14668042 | MS.gene99820:intron | 40.0% | |
| AGAAAAGTAACCACGTGTGT+CGG | - | chr2.3:14665136-14665155 | None:intergenic | 40.0% | |
| AGTCTCATGTCAAGTAGCAT+AGG | + | chr2.3:14668012-14668031 | MS.gene99820:intron | 40.0% | |
| ATCTGAATGCTATGCCTCAT+AGG | + | chr2.3:14668955-14668974 | MS.gene99820:intron | 40.0% | |
| ATGGGACTTAAGTACTATGG+GGG | + | chr2.3:14667771-14667790 | MS.gene99820:intron | 40.0% | |
| ATTGTGGCCAAATGTTCACA+TGG | - | chr2.3:14668388-14668407 | None:intergenic | 40.0% | |
| CAATTGATCGAACTCTCCAT+CGG | - | chr2.3:14668993-14669012 | None:intergenic | 40.0% | |
| CAGAAACTATATCATGCACG+AGG | - | chr2.3:14667359-14667378 | None:intergenic | 40.0% | |
| CCAATGTTGTCAATAGATCG+CGG | - | chr2.3:14665549-14665568 | None:intergenic | 40.0% | |
| CCAATTAGCCACACAAAACA+CGG | - | chr2.3:14666436-14666455 | None:intergenic | 40.0% | |
| CCTTAAAAGCTAGCTATCGA+GGG | - | chr2.3:14668074-14668093 | None:intergenic | 40.0% | |
| CGTGAAAGGATACAATGCAT+TGG | + | chr2.3:14665887-14665906 | MS.gene99820:CDS | 40.0% | |
| CTATAGTAGTGCTTTAGTGC+TGG | + | chr2.3:14669616-14669635 | MS.gene99820:intron | 40.0% | |
| CTGAATCAGAGTTTCGATGA+AGG | - | chr2.3:14664638-14664657 | None:intergenic | 40.0% | |
| CTGGGATGTATCCTAAAAAC+GGG | + | chr2.3:14667662-14667681 | MS.gene99820:intron | 40.0% | |
| CTTAAAAGCTAGCTATCGAG+GGG | - | chr2.3:14668073-14668092 | None:intergenic | 40.0% | |
| CTTCATCGAAACTCTGATTC+AGG | + | chr2.3:14664636-14664655 | MS.gene99820:CDS | 40.0% | |
| GACTGTGTAACTAGCAATGA+AGG | - | chr2.3:14667308-14667327 | None:intergenic | 40.0% | |
| GATGGGACTTAAGTACTATG+GGG | + | chr2.3:14667770-14667789 | MS.gene99820:intron | 40.0% | |
| GCATTCCAGATTTATCGGTA+AGG | + | chr2.3:14667329-14667348 | MS.gene99820:intron | 40.0% | |
| GTCAAGTAGCATAGGATGTT+TGG | + | chr2.3:14668020-14668039 | MS.gene99820:intron | 40.0% | |
| GTGGGTAGTCATCATTTGAT+GGG | + | chr2.3:14667753-14667772 | MS.gene99820:intron | 40.0% | |
| GTGTTGTCAATTGTGGAATG+CGG | - | chr2.3:14669673-14669692 | None:intergenic | 40.0% | |
| TAGCGTCATGTTAGTGGTTA+GGG | + | chr2.3:14665327-14665346 | MS.gene99820:intron | 40.0% | |
| TATGATGGTATGGAGGGATT+AGG | + | chr2.3:14667194-14667213 | MS.gene99820:intron | 40.0% | |
| TCAAATGATGACTACCCACA+TGG | - | chr2.3:14667752-14667771 | None:intergenic | 40.0% | |
| TCATAGGAGGTGAAAAAAGG+GGG | - | chr2.3:14665233-14665252 | None:intergenic | 40.0% | |
| TGATAAGTATCCAAGCCCTT+AGG | - | chr2.3:14668105-14668124 | None:intergenic | 40.0% | |
| TGCAAAGATACTAGGAACTG+AGG | + | chr2.3:14665824-14665843 | MS.gene99820:CDS | 40.0% | |
| TGCAATTGAAGAAATGGGGA+AGG | + | chr2.3:14665956-14665975 | MS.gene99820:CDS | 40.0% | |
| TGCAGATGAATTGTCTGAAG+CGG | + | chr2.3:14664857-14664876 | MS.gene99820:intron | 40.0% | |
| TGGGATGTATCCTAAAAACG+GGG | + | chr2.3:14667663-14667682 | MS.gene99820:intron | 40.0% | |
| TGTGGGTAGTCATCATTTGA+TGG | + | chr2.3:14667752-14667771 | MS.gene99820:intron | 40.0% | |
| TGTTATGGAAGGGTTCTTTG+AGG | - | chr2.3:14668896-14668915 | None:intergenic | 40.0% | |
| TTAAAAGCTAGCTATCGAGG+GGG | - | chr2.3:14668072-14668091 | None:intergenic | 40.0% | |
| TTAGCGTCATGTTAGTGGTT+AGG | + | chr2.3:14665326-14665345 | MS.gene99820:intron | 40.0% | |
| ! | ATCTAGCTTCTAAGAGAGGT+TGG | + | chr2.3:14667867-14667886 | MS.gene99820:intron | 40.0% |
| ! | ATGCTACTTGACATGAGACT+TGG | - | chr2.3:14668012-14668031 | None:intergenic | 40.0% |
| ! | CACTAAAGCACTACTATAGC+TGG | - | chr2.3:14669615-14669634 | None:intergenic | 40.0% |
| ! | CGATATCTAGCTTCTAAGAG+AGG | + | chr2.3:14667863-14667882 | MS.gene99820:intron | 40.0% |
| ! | TCAATTGCTTCTGCTACTTG+AGG | + | chr2.3:14669006-14669025 | MS.gene99820:CDS | 40.0% |
| ! | TCACCTCTTGAGCTAACTTT+TGG | + | chr2.3:14669406-14669425 | MS.gene99820:intron | 40.0% |
| ! | TCTAGCTTCTAAGAGAGGTT+GGG | + | chr2.3:14667868-14667887 | MS.gene99820:intron | 40.0% |
| ! | TCTTGTTGTAACCTTCGGTT+TGG | + | chr2.3:14666986-14667005 | MS.gene99820:intron | 40.0% |
| ! | TGAAGGATAAGCTTGGTCTT+TGG | + | chr2.3:14669862-14669881 | MS.gene99820:CDS | 40.0% |
| ! | TTCTAAGAGAGGTTGGGAAA+GGG | + | chr2.3:14667874-14667893 | MS.gene99820:intron | 40.0% |
| ! | TTGGTGTTCTTGAAGGTTGA+GGG | + | chr2.3:14668518-14668537 | MS.gene99820:intron | 40.0% |
| !! | ACAAGGTTCTGGAAGTAACT+TGG | - | chr2.3:14668673-14668692 | None:intergenic | 40.0% |
| !! | ACGGAAGGAGAATATTTTGG+AGG | + | chr2.3:14666816-14666835 | MS.gene99820:CDS | 40.0% |
| !! | CTCTATAGCGAAGGTATTTC+AGG | + | chr2.3:14666879-14666898 | MS.gene99820:CDS | 40.0% |
| !! | GGAGAATATTTTGGAGGTGT+TGG | + | chr2.3:14666822-14666841 | MS.gene99820:CDS | 40.0% |
| !! | TGTAGCAGTGTCACTTCTAA+TGG | + | chr2.3:14665012-14665031 | MS.gene99820:intron | 40.0% |
| !! | TTCTTGAAGTCCCCGTTTTT+AGG | - | chr2.3:14667676-14667695 | None:intergenic | 40.0% |
| !! | TTTGGAGGTGTTGGAAATCA+TGG | + | chr2.3:14666831-14666850 | MS.gene99820:CDS | 40.0% |
| !!! | CCTCGATAGCTAGCTTTTAA+GGG | + | chr2.3:14668072-14668091 | MS.gene99820:intron | 40.0% |
| !!! | GACACTTTTGATTTACGAGG+TGG | + | chr2.3:14666230-14666249 | MS.gene99820:intron | 40.0% |
| !!! | GACGACACTTTTGATTTACG+AGG | + | chr2.3:14666227-14666246 | MS.gene99820:CDS | 40.0% |
| AAATTGGTGCATCCACTGTC+TGG | + | chr2.3:14666645-14666664 | MS.gene99820:intron | 45.0% | |
| AATGTCCTACTGCAGACTCA+GGG | - | chr2.3:14667625-14667644 | None:intergenic | 45.0% | |
| ACCCAGTCTTGCAGTTGAAT+TGG | - | chr2.3:14666123-14666142 | None:intergenic | 45.0% | |
| ACGTAACTGTGCATTGCTCA+AGG | + | chr2.3:14668619-14668638 | MS.gene99820:CDS | 45.0% | |
| ACTATTGGAACCTGTTGCAG+AGG | + | chr2.3:14666915-14666934 | MS.gene99820:CDS | 45.0% | |
| AGGACCTGCGCTTATGTTAT+TGG | - | chr2.3:14667573-14667592 | None:intergenic | 45.0% | |
| AGTGGTTAGGGTTTGAACCT+TGG | + | chr2.3:14665339-14665358 | MS.gene99820:intron | 45.0% | |
| ATGACTACCCACATGGTGTT+GGG | - | chr2.3:14667745-14667764 | None:intergenic | 45.0% | |
| CAATCATCGGCAAACTTGCA+TGG | + | chr2.3:14669824-14669843 | MS.gene99820:CDS | 45.0% | |
| CAGAGTTTCGATGAAGGTTG+AGG | - | chr2.3:14664632-14664651 | None:intergenic | 45.0% | |
| CAGCTGCTGTGTGAAAACAT+TGG | - | chr2.3:14669513-14669532 | None:intergenic | 45.0% | |
| CATGCAAGTTTGCCGATGAT+TGG | - | chr2.3:14669826-14669845 | None:intergenic | 45.0% | |
| CCAAACACACGATTAGTGAC+AGG | - | chr2.3:14668459-14668478 | None:intergenic | 45.0% | |
| CCCAATTCAACTGCAAGACT+GGG | + | chr2.3:14666119-14666138 | MS.gene99820:CDS | 45.0% | |
| CCCAGTCTTGCAGTTGAATT+GGG | - | chr2.3:14666122-14666141 | None:intergenic | 45.0% | |
| CCCTTAAAAGCTAGCTATCG+AGG | - | chr2.3:14668075-14668094 | None:intergenic | 45.0% | |
| CCGCGATCTATTGACAACAT+TGG | + | chr2.3:14665546-14665565 | MS.gene99820:intron | 45.0% | |
| CCTGTCACTAATCGTGTGTT+TGG | + | chr2.3:14668456-14668475 | MS.gene99820:intron | 45.0% | |
| CTATCCACCAATTCTGCTCT+AGG | - | chr2.3:14668209-14668228 | None:intergenic | 45.0% | |
| GAAACCTAGAGCAGAATTGG+TGG | + | chr2.3:14668202-14668221 | MS.gene99820:intron | 45.0% | |
| GATAAAGTGGGACGAAAACC+AGG | + | chr2.3:14665864-14665883 | MS.gene99820:CDS | 45.0% | |
| GCAGCAAGCATCATTCCAAT+AGG | - | chr2.3:14669047-14669066 | None:intergenic | 45.0% | |
| GCATCAACTTTCTCGGTATC+AGG | - | chr2.3:14665645-14665664 | None:intergenic | 45.0% | |
| GGTGGAAAGTTTAAGTGGCT+TGG | + | chr2.3:14668041-14668060 | MS.gene99820:intron | 45.0% | |
| TAGAAGTGACACTGCTACAG+AGG | - | chr2.3:14665011-14665030 | None:intergenic | 45.0% | |
| TATGTCTCCAAACCAGACAG+TGG | - | chr2.3:14666660-14666679 | None:intergenic | 45.0% | |
| TCCCAATTCAACTGCAAGAC+TGG | + | chr2.3:14666118-14666137 | MS.gene99820:CDS | 45.0% | |
| TCTTTGTGAGAGTGAACGGA+AGG | + | chr2.3:14666801-14666820 | MS.gene99820:CDS | 45.0% | |
| TGGCTCTTTGTGAGAGTGAA+CGG | + | chr2.3:14666797-14666816 | MS.gene99820:CDS | 45.0% | |
| TTAAACCCTGAGTCTGCAGT+AGG | + | chr2.3:14667617-14667636 | MS.gene99820:intron | 45.0% | |
| ! | ATCAAAGAGTGTAGCTTCCG+GGG | + | chr2.3:14667935-14667954 | MS.gene99820:intron | 45.0% |
| ! | CATCAAAGAGTGTAGCTTCC+GGG | + | chr2.3:14667934-14667953 | MS.gene99820:intron | 45.0% |
| ! | CCGTGTTTTGTGTGGCTAAT+TGG | + | chr2.3:14666433-14666452 | MS.gene99820:intron | 45.0% |
| ! | CTTCTAAGAGAGGTTGGGAA+AGG | + | chr2.3:14667873-14667892 | MS.gene99820:intron | 45.0% |
| ! | GCATCAAAGAGTGTAGCTTC+CGG | + | chr2.3:14667933-14667952 | MS.gene99820:intron | 45.0% |
| ! | GGCATTGGGAAGACTACTAT+TGG | + | chr2.3:14666900-14666919 | MS.gene99820:CDS | 45.0% |
| ! | GTTGGTGTTCTTGAAGGTTG+AGG | + | chr2.3:14668517-14668536 | MS.gene99820:intron | 45.0% |
| ! | TGCTGAGTTACTCTAAGGGT+TGG | - | chr2.3:14665375-14665394 | None:intergenic | 45.0% |
| !! | AGCGAAGGTATTTCAGGCAT+TGG | + | chr2.3:14666885-14666904 | MS.gene99820:CDS | 45.0% |
| !! | AGCGCAGGTCCTTTAAAGTT+TGG | + | chr2.3:14667581-14667600 | MS.gene99820:intron | 45.0% |
| !! | ATCTGTTGGCTCTATAGCGA+AGG | + | chr2.3:14666870-14666889 | MS.gene99820:CDS | 45.0% |
| !! | GCGAAGGTATTTCAGGCATT+GGG | + | chr2.3:14666886-14666905 | MS.gene99820:CDS | 45.0% |
| !!! | CCCTCGATAGCTAGCTTTTA+AGG | + | chr2.3:14668071-14668090 | MS.gene99820:intron | 45.0% |
| AAAAGGAGCTCCTCTGCAAC+AGG | - | chr2.3:14666928-14666947 | None:intergenic | 50.0% | |
| CAACTCTCCCAACACCATGT+GGG | + | chr2.3:14667735-14667754 | MS.gene99820:intron | 50.0% | |
| GAATGTCCTACTGCAGACTC+AGG | - | chr2.3:14667626-14667645 | None:intergenic | 50.0% | |
| GATGACTACCCACATGGTGT+TGG | - | chr2.3:14667746-14667765 | None:intergenic | 50.0% | |
| GCAGAGCTATGATAGGGACT+TGG | + | chr2.3:14667972-14667991 | MS.gene99820:intron | 50.0% | |
| GCATTGTATCCTTTCACGCC+TGG | - | chr2.3:14665885-14665904 | None:intergenic | 50.0% | |
| GGAACAAGTGTGCTCCTATG+AGG | - | chr2.3:14668972-14668991 | None:intergenic | 50.0% | |
| GGGCGATATGTTTGCTCTTC+TGG | - | chr2.3:14666023-14666042 | None:intergenic | 50.0% | |
| GTGTTCTTGAAGGTTGAGGG+AGG | + | chr2.3:14668521-14668540 | MS.gene99820:intron | 50.0% | |
| TCTCGGGCAGAGCTATGATA+GGG | + | chr2.3:14667966-14667985 | MS.gene99820:intron | 50.0% | |
| TGACAACATTGGACCTCGCT+TGG | + | chr2.3:14665557-14665576 | MS.gene99820:intron | 50.0% | |
| ! | GATGCTTTGTTCGGCCATTG+CGG | - | chr2.3:14667918-14667937 | None:intergenic | 50.0% |
| ! | GTCTGTGTCACTGTCTTGTC+CGG | + | chr2.3:14665108-14665127 | MS.gene99820:intron | 50.0% |
| ! | TAGGAGCACACTTGTTCCGA+TGG | + | chr2.3:14668974-14668993 | MS.gene99820:intron | 50.0% |
| !! | AGGTTGGGAAAGGGTACCTA+TGG | + | chr2.3:14667883-14667902 | MS.gene99820:intron | 50.0% |
| !! | GTGCTTTAGTGCTGGCGTAA+TGG | + | chr2.3:14669624-14669643 | MS.gene99820:intron | 50.0% |
| !! | TGGGAAAGGGTACCTATGGA+GGG | + | chr2.3:14667887-14667906 | MS.gene99820:intron | 50.0% |
| !! | TTGGGAAAGGGTACCTATGG+AGG | + | chr2.3:14667886-14667905 | MS.gene99820:intron | 50.0% |
| AGTGTAGCTTCCGGGGACAT+CGG | + | chr2.3:14667942-14667961 | MS.gene99820:intron | 55.0% | |
| ATTGCGGTCAACCCCTCCAT+AGG | - | chr2.3:14667902-14667921 | None:intergenic | 55.0% | |
| CCAACTCTCCCAACACCATG+TGG | + | chr2.3:14667734-14667753 | MS.gene99820:intron | 55.0% | |
| CTCTCGGGCAGAGCTATGAT+AGG | + | chr2.3:14667965-14667984 | MS.gene99820:intron | 55.0% | |
| GATGAAGGTTGAGGCTTGCG+AGG | - | chr2.3:14664623-14664642 | None:intergenic | 55.0% | |
| GGACGAAAACCAGGCGTGAA+AGG | + | chr2.3:14665873-14665892 | MS.gene99820:CDS | 55.0% | |
| GGGACAGTTTCCTAAGGGCT+TGG | + | chr2.3:14668092-14668111 | MS.gene99820:intron | 55.0% | |
| GGGTTGGAGAATCAGCTCCA+AGG | - | chr2.3:14665359-14665378 | None:intergenic | 55.0% | |
| GGTGCATCCACTGTCTGGTT+TGG | + | chr2.3:14666650-14666669 | MS.gene99820:intron | 55.0% | |
| GTAGTTCAAGTGGCCAAGCG+AGG | - | chr2.3:14665573-14665592 | None:intergenic | 55.0% | |
| TATGGAGGGGTTGACCGCAA+TGG | + | chr2.3:14667901-14667920 | MS.gene99820:intron | 55.0% | |
| ! | CCACATGGTGTTGGGAGAGT+TGG | - | chr2.3:14667737-14667756 | None:intergenic | 55.0% |
| !! | GGGAAAGGGTACCTATGGAG+GGG | + | chr2.3:14667888-14667907 | MS.gene99820:intron | 55.0% |
| ! | GTAACCACGTGTGTCGGCGC+CGG | - | chr2.3:14665130-14665149 | None:intergenic | 65.0% |
| !! | CTTCCGGGGACATCGGCTCT+CGG | + | chr2.3:14667949-14667968 | MS.gene99820:intron | 65.0% |
| !! | TTCCGGGGACATCGGCTCTC+GGG | + | chr2.3:14667950-14667969 | MS.gene99820:intron | 65.0% |
| TGCCCGAGAGCCGATGTCCC+CGG | - | chr2.3:14667955-14667974 | None:intergenic | 70.0% | |
| !! | TTGTCCGGCGCCGACACACG+TGG | + | chr2.3:14665123-14665142 | MS.gene99820:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 14664607 | 14669959 | 14664607 | ID=MS.gene99820 |
| chr2.3 | mRNA | 14664607 | 14669959 | 14664607 | ID=MS.gene99820.t1;Parent=MS.gene99820 |
| chr2.3 | exon | 14664607 | 14664657 | 14664607 | ID=MS.gene99820.t1.exon1;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14664607 | 14664657 | 14664607 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| chr2.3 | exon | 14664862 | 14664909 | 14664862 | ID=MS.gene99820.t1.exon2;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14664862 | 14664909 | 14664862 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| chr2.3 | exon | 14665330 | 14665342 | 14665330 | ID=MS.gene99820.t1.exon3;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14665330 | 14665342 | 14665330 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| chr2.3 | exon | 14665622 | 14666248 | 14665622 | ID=MS.gene99820.t1.exon4;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14665622 | 14666248 | 14665622 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| chr2.3 | exon | 14666785 | 14666964 | 14666785 | ID=MS.gene99820.t1.exon5;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14666785 | 14666964 | 14666785 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| chr2.3 | exon | 14667281 | 14667345 | 14667281 | ID=MS.gene99820.t1.exon6;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14667281 | 14667345 | 14667281 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| chr2.3 | exon | 14668533 | 14668640 | 14668533 | ID=MS.gene99820.t1.exon7;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14668533 | 14668640 | 14668533 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| chr2.3 | exon | 14668977 | 14669104 | 14668977 | ID=MS.gene99820.t1.exon8;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14668977 | 14669104 | 14668977 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| chr2.3 | exon | 14669198 | 14669276 | 14669198 | ID=MS.gene99820.t1.exon9;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14669198 | 14669276 | 14669198 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| chr2.3 | exon | 14669795 | 14669959 | 14669795 | ID=MS.gene99820.t1.exon10;Parent=MS.gene99820.t1 |
| chr2.3 | CDS | 14669795 | 14669959 | 14669795 | ID=cds.MS.gene99820.t1;Parent=MS.gene99820.t1 |
| Gene Sequence |
| Protein sequence |
