AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005320.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005320.01.T01 MTR_1g097090 96.809 470 15 0 1 470 1 470 0.0 949
MsG0180005320.01.T01 MTR_1g097090 96.809 470 15 0 1 470 1 470 0.0 947
MsG0180005320.01.T01 MTR_4g084200 36.627 415 212 8 54 462 91 460 4.80e-84 267
MsG0180005320.01.T01 MTR_4g084200 36.043 369 195 7 54 416 91 424 2.57e-73 238
MsG0180005320.01.T01 MTR_4g084200 37.183 355 182 7 54 402 91 410 6.23e-73 237
MsG0180005320.01.T01 MTR_3g085480 34.071 452 242 11 19 462 13 416 3.11e-71 232
MsG0180005320.01.T01 MTR_8g080490 33.913 460 234 12 18 462 10 414 1.02e-70 231
MsG0180005320.01.T01 MTR_4g077920 34.588 425 211 9 50 462 107 476 1.41e-68 228
MsG0180005320.01.T01 MTR_4g077920 34.963 409 199 9 50 446 107 460 8.64e-68 224
MsG0180005320.01.T01 MTR_3g037720 33.803 426 220 11 50 462 110 486 9.57e-65 217
MsG0180005320.01.T01 MTR_6g027310 33.803 426 220 14 55 467 113 489 1.41e-63 214
MsG0180005320.01.T01 MTR_7g087100 32.609 414 230 11 55 462 116 486 6.78e-59 202
MsG0180005320.01.T01 MTR_4g077920 38.889 288 147 5 182 462 153 418 4.18e-56 193
MsG0180005320.01.T01 MTR_8g080490 30.938 320 156 12 18 322 10 279 2.16e-26 109
MsG0180005320.01.T01 MTR_3g110200 24.623 398 230 14 51 424 216 567 3.23e-17 84.7
MsG0180005320.01.T01 MTR_4g115540 29.329 283 173 9 145 423 340 599 7.63e-17 83.6
MsG0180005320.01.T01 MTR_3g110198 25.472 318 188 10 115 422 290 568 9.57e-15 77.0
MsG0180005320.01.T01 MTR_1g006600 25.545 321 186 12 115 423 283 562 2.09e-14 75.9
MsG0180005320.01.T01 MTR_7g103150 26.316 323 179 14 115 422 181 459 2.31e-14 75.5
MsG0180005320.01.T01 MTR_2g084245 27.703 296 152 12 139 405 131 393 1.88e-13 72.4
MsG0180005320.01.T01 MTR_4g115460 25.159 314 201 9 116 423 152 437 3.09e-13 72.0
MsG0180005320.01.T01 MTR_8g096140 26.132 287 167 9 195 463 142 401 4.11e-13 71.2
MsG0180005320.01.T01 MTR_4g057500 25.979 281 146 8 139 390 149 396 4.58e-13 71.6
MsG0180005320.01.T01 MTR_1g029350 24.742 291 189 9 139 422 124 391 7.06e-13 70.9
MsG0180005320.01.T01 MTR_4g100730 27.049 244 156 6 187 423 283 511 3.37e-12 68.9
MsG0180005320.01.T01 MTR_8g096160 25.087 287 170 9 195 463 142 401 3.97e-12 68.2
MsG0180005320.01.T01 MTR_5g031480 25.157 318 182 14 127 424 110 391 6.75e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005320.01.T01 AT1G34270 71.895 459 124 4 14 470 16 471 0.0 687
MsG0180005320.01.T01 AT5G44930 33.682 478 238 10 2 462 3 418 1.08e-77 249
MsG0180005320.01.T01 AT5G44930 33.682 478 238 10 2 462 3 418 1.08e-77 249
MsG0180005320.01.T01 AT2G35100 34.293 417 221 8 50 462 55 422 1.15e-73 239
MsG0180005320.01.T01 AT1G67410 32.495 477 249 12 14 471 5 427 1.52e-72 236
MsG0180005320.01.T01 AT5G44930 34.217 415 204 9 2 399 3 365 2.76e-68 223
MsG0180005320.01.T01 AT3G45400 32.114 492 264 12 1 462 1 452 4.92e-68 225
MsG0180005320.01.T01 AT5G16890 33.645 428 211 9 50 462 113 482 2.23e-64 217
MsG0180005320.01.T01 AT1G74680 33.494 415 228 12 55 462 75 448 3.16e-64 215
MsG0180005320.01.T01 AT3G03650 33.571 420 235 8 48 462 114 494 3.42e-63 213
MsG0180005320.01.T01 AT1G67410 27.414 321 171 10 14 315 5 282 1.29e-25 107
MsG0180005320.01.T01 AT4G32790 25.153 326 201 12 105 422 278 568 3.98e-15 78.2
MsG0180005320.01.T01 AT4G32790 25.153 326 201 12 105 422 278 568 3.98e-15 78.2
MsG0180005320.01.T01 AT4G32790 25.153 326 201 12 105 422 278 568 3.98e-15 78.2
MsG0180005320.01.T01 AT5G20260 26.538 260 163 7 169 421 68 306 3.06e-13 71.2
MsG0180005320.01.T01 AT1G21480 24.490 294 186 9 139 422 139 406 3.64e-13 72.0
MsG0180005320.01.T01 AT5G20260 26.538 260 163 7 169 421 95 333 4.63e-13 70.9
MsG0180005320.01.T01 AT5G20260 26.336 262 165 7 169 423 200 440 6.80e-13 70.9
MsG0180005320.01.T01 AT1G63450 25.159 314 185 13 139 427 352 640 8.37e-13 71.2
MsG0180005320.01.T01 AT5G33290 27.070 314 179 14 90 386 159 439 1.25e-12 70.5
MsG0180005320.01.T01 AT1G21480 25.600 250 158 7 139 381 139 367 1.35e-12 69.7
MsG0180005320.01.T01 AT5G19670 24.830 294 175 10 105 387 292 550 1.85e-12 70.1
MsG0180005320.01.T01 AT5G19670 24.830 294 175 10 105 387 292 550 1.85e-12 70.1
MsG0180005320.01.T01 AT5G61840 23.837 344 208 12 139 463 92 400 7.53e-12 67.4
MsG0180005320.01.T01 AT2G28110 25.000 280 170 7 139 400 138 395 1.01e-11 67.4
MsG0180005320.01.T01 AT1G27440 24.912 285 173 8 195 463 138 397 1.04e-11 67.0
MsG0180005320.01.T01 AT4G16745 28.495 186 115 5 278 452 367 545 1.73e-11 67.0
MsG0180005320.01.T01 AT5G11130 22.781 338 221 11 90 421 2 305 9.75e-11 63.5

Find 137 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCCTTGTTGTGGATTT+TGG 0.144950 1:-90246934 MsG0180005320.01.T01:CDS
GCACTGTACTGTTTGATAAT+TGG 0.173216 1:+90248046 None:intergenic
AAATTCTAAGGCTTTGGTTT+TGG 0.260702 1:+90248096 None:intergenic
GGAGCATTGTTGTTGTTCTT+TGG 0.294723 1:+90248361 None:intergenic
TTCAGTAAATTCTAAGGCTT+TGG 0.305076 1:+90248090 None:intergenic
TGGAAATTCAGTAAATTCTA+AGG 0.317464 1:+90248084 None:intergenic
TACTGGGTCGTTTGCAAAAC+GGG 0.327155 1:-90247978 MsG0180005320.01.T01:CDS
TGCTCTCGCCCAGTCGCATT+AGG 0.349546 1:+90245209 None:intergenic
GCTGCACTCGAGCCATGTTT+TGG 0.351102 1:+90244931 None:intergenic
TTAACATGCCACATTGCAAC+TGG 0.357968 1:+90246976 None:intergenic
GTCTATGATAATGGTCATTC+GGG 0.367182 1:-90244900 MsG0180005320.01.T01:CDS
ATCGACGTCGCTGCCGATTC+GGG 0.368142 1:+90248132 None:intergenic
CATTTCAGACGAGGTACAAT+TGG 0.375849 1:+90246882 None:intergenic
GATCGACGTCGCTGCCGATT+CGG 0.380542 1:+90248131 None:intergenic
ATGTTGTCGCTGACAATAAC+AGG 0.381177 1:+90245086 None:intergenic
GAGGGCGTAGTTGAGGGATC+TGG 0.395919 1:+90248186 None:intergenic
GTCGCTGCCGATTCGGGAAT+CGG 0.400879 1:+90248138 None:intergenic
CCCATGTTTGTCTATGATAA+TGG 0.401139 1:-90244909 MsG0180005320.01.T01:CDS
TTGTTGTTGTTCTTTGGAAT+TGG 0.404241 1:+90248367 None:intergenic
GAAGAACGTGAGAGAGAGAA+TGG 0.404972 1:+90248297 None:intergenic
TAGTCCACTGTACCTTCAAA+TGG 0.405969 1:+90245056 None:intergenic
TATGAGTGCTGAATTGCAAT+TGG 0.410092 1:-90247906 MsG0180005320.01.T01:CDS
CACCGACGAAATTGCGTACT+GGG 0.413292 1:-90247994 MsG0180005320.01.T01:CDS
TGTCTATGATAATGGTCATT+CGG 0.417721 1:-90244901 MsG0180005320.01.T01:CDS
AAGAGTGTGGGAATGGAGAA+TGG 0.418682 1:+90248340 None:intergenic
ACGAAAGCATGGAATCGTTC+TGG 0.418714 1:-90247800 MsG0180005320.01.T01:CDS
TAGGAAGAAGGTTGGGAATG+AGG 0.424813 1:-90247864 MsG0180005320.01.T01:CDS
AATGGTCATTCGGGTGGTAT+TGG 0.426651 1:-90244891 MsG0180005320.01.T01:CDS
GAAGAGAAAGAGTGTGGGAA+TGG 0.433432 1:+90248333 None:intergenic
GCTCTCGCCCAGTCGCATTA+GGG 0.433894 1:+90245210 None:intergenic
AACAGTACAGTGCGGAGTAT+TGG 0.445349 1:-90248036 MsG0180005320.01.T01:CDS
TTCACCTCCGATTCCCGAAT+CGG 0.447889 1:-90248145 MsG0180005320.01.T01:CDS
GTGTGTCCCCAGCCGGATGC+AGG 0.448189 1:+90245153 None:intergenic
GAGTGAAGAGTGTGTGGTGG+TGG 0.454997 1:+90248258 None:intergenic
AACATAGAGCTCCCATTTGA+AGG 0.457084 1:-90245068 MsG0180005320.01.T01:CDS
TTAAGTACATTGACATCGTC+GGG 0.458108 1:+90244753 None:intergenic
CAGTGCGGAGTATTGGATCA+TGG 0.459205 1:-90248029 MsG0180005320.01.T01:CDS
TACTGAATTTCCACCATACC+CGG 0.464849 1:-90248074 MsG0180005320.01.T01:CDS
TGCAATTGGGTATGGCGAAA+GGG 0.465853 1:-90247892 MsG0180005320.01.T01:CDS
TGAAGGACCAGTAGCGGTTG+AGG 0.466031 1:+90248164 None:intergenic
AGGGCGTAGTTGAGGGATCT+GGG 0.470536 1:+90248187 None:intergenic
ACGCCCTCCTCAACCGCTAC+TGG 0.470670 1:-90248171 MsG0180005320.01.T01:CDS
CCCGGCCATTCTCCTTGTTG+TGG 0.473519 1:-90246941 MsG0180005320.01.T01:CDS
GAAGGCTTCCCTAATGCGAC+TGG 0.476447 1:-90245218 MsG0180005320.01.T01:CDS
ACTGACCCGGTGCCGATGCT+TGG 0.477951 1:+90246741 None:intergenic
GATCATGTGTTTGTTGTCAC+TGG 0.480706 1:-90247770 MsG0180005320.01.T01:intron
TTGTTGTTCTTTGGAATTGG+AGG 0.480976 1:+90248370 None:intergenic
GTTGAGGAGGGCGTAGTTGA+GGG 0.481287 1:+90248180 None:intergenic
TCCACAACAAGGAGAATGGC+CGG 0.488926 1:+90246940 None:intergenic
TAATGAGCCCGGTGTAATCA+TGG 0.490173 1:-90245243 MsG0180005320.01.T01:CDS
AGGTATGCAAAGACTTTGAA+TGG 0.492570 1:+90245106 None:intergenic
ACACCGACGAAATTGCGTAC+TGG 0.493490 1:-90247995 MsG0180005320.01.T01:CDS
GCCTAGTTAGAGAGAAGTTG+TGG 0.494386 1:-90245277 MsG0180005320.01.T01:CDS
AGCCGGATGCAGGCAAAACT+CGG 0.495250 1:+90245163 None:intergenic
AGAGTGTGTGGTGGTGGTGT+AGG 0.496187 1:+90248264 None:intergenic
TCTCTTCAACCAACCACCTC+CGG 0.496354 1:-90248235 MsG0180005320.01.T01:CDS
AAGGAGCCAAGCATCGGCAC+CGG 0.501263 1:-90246747 MsG0180005320.01.T01:CDS
TTACAGAAACTTGAGTGTGT+TGG 0.510748 1:+90246857 None:intergenic
ATGGTGCAGTGAATCATATA+TGG 0.511995 1:-90244854 MsG0180005320.01.T01:CDS
GTACTGGGTCGTTTGCAAAA+CGG 0.515407 1:-90247979 MsG0180005320.01.T01:CDS
CACAACCTTCTCTATTTCAA+AGG 0.517809 1:-90246766 MsG0180005320.01.T01:CDS
AAAATCCACAACAAGGAGAA+TGG 0.518213 1:+90246936 None:intergenic
GGGCGTAGTTGAGGGATCTG+GGG 0.520812 1:+90248188 None:intergenic
AGTGCGGAGTATTGGATCAT+GGG 0.524351 1:-90248028 MsG0180005320.01.T01:CDS
TTGCAATTGGGTATGGCGAA+AGG 0.524843 1:-90247893 MsG0180005320.01.T01:CDS
ATGAGGATTATCAGAGGCAG+AGG 0.530227 1:-90247847 MsG0180005320.01.T01:CDS
CCCACAACTTCTCTCTAACT+AGG 0.532666 1:+90245276 None:intergenic
TGGTATTGGCCCTGTACCTA+TGG 0.536105 1:-90244877 MsG0180005320.01.T01:CDS
CCACAACAAGGAGAATGGCC+GGG 0.537997 1:+90246941 None:intergenic
GTGTGTGGTGGTGGTGTAGG+AGG 0.538288 1:+90248267 None:intergenic
ACTGCACCATCCATAGGTAC+AGG 0.542217 1:+90244867 None:intergenic
GGGCGAGAGCAATCAATACA+AGG 0.544501 1:-90245197 MsG0180005320.01.T01:CDS
TTTAAGTACATTGACATCGT+CGG 0.545449 1:+90244752 None:intergenic
AAGAAAACCACCGGGTGTGT+TGG 0.547239 1:-90244778 MsG0180005320.01.T01:CDS
GGACCAGTAGCGGTTGAGGA+GGG 0.548816 1:+90248168 None:intergenic
AGGAGCCAAGCATCGGCACC+GGG 0.549166 1:-90246746 MsG0180005320.01.T01:intron
GTGATGCACTTAAACCAAGC+TGG 0.550784 1:-90245004 MsG0180005320.01.T01:CDS
GGTTGAGGAGGGCGTAGTTG+AGG 0.551139 1:+90248179 None:intergenic
GTTGAGGGATCTGGGGAGGT+CGG 0.554405 1:+90248195 None:intergenic
GATTCGGGAATCGGAGGTGA+AGG 0.555168 1:+90248147 None:intergenic
AGTCCACTGTACCTTCAAAT+GGG 0.555585 1:+90245057 None:intergenic
CACAACAAGGAGAATGGCCG+GGG 0.558397 1:+90246942 None:intergenic
GAAGTGGGTGTGTCCCCAGC+CGG 0.560502 1:+90245146 None:intergenic
TGGCTCCTTTGAAATAGAGA+AGG 0.560562 1:+90246761 None:intergenic
AGATGATTGACTATCCAGCT+TGG 0.562713 1:+90244990 None:intergenic
TCGAGAGAAAAGAAAACCAC+CGG 0.564673 1:-90244787 MsG0180005320.01.T01:CDS
TGCTGAATTGCAATTGGGTA+TGG 0.567949 1:-90247900 MsG0180005320.01.T01:CDS
TTGTGAAGAAAACGAAAGCA+TGG 0.572498 1:-90247811 MsG0180005320.01.T01:CDS
ATGAGTGCTGAATTGCAATT+GGG 0.572561 1:-90247905 MsG0180005320.01.T01:CDS
CGGGGTAGAAGATGTGTGTA+CGG 0.572897 1:+90246817 None:intergenic
CCTTCCTCCATGATTACACC+GGG 0.575893 1:+90245236 None:intergenic
CCTAGTTAGAGAGAAGTTGT+GGG 0.578078 1:-90245276 MsG0180005320.01.T01:CDS
GCAATTGGGTATGGCGAAAG+GGG 0.581075 1:-90247891 MsG0180005320.01.T01:CDS
AAGAGAGAGTGAAGAGTGTG+TGG 0.582928 1:+90248252 None:intergenic
GTAGACGTTGATGCCGGAGG+TGG 0.584831 1:+90248222 None:intergenic
ATTGGCCCTGTACCTATGGA+TGG 0.585292 1:-90244873 MsG0180005320.01.T01:CDS
TAACATGCCACATTGCAACT+GGG 0.588615 1:+90246977 None:intergenic
GCCTTCCTCCATGATTACAC+CGG 0.589678 1:+90245235 None:intergenic
ATGAAGAAGAGAAAGAGTGT+GGG 0.590582 1:+90248328 None:intergenic
TGATTCACTGCACCATCCAT+AGG 0.590916 1:+90244861 None:intergenic
AGACACGTTCCGCCAAAACA+TGG 0.591709 1:-90244943 MsG0180005320.01.T01:CDS
ACGTTGATGCCGGAGGTGGT+TGG 0.592173 1:+90248226 None:intergenic
GATGAAGAAGAGAAAGAGTG+TGG 0.598357 1:+90248327 None:intergenic
AAAGCATGGAATCGTTCTGG+TGG 0.600089 1:-90247797 MsG0180005320.01.T01:CDS
AGAGAGTGAAGAGTGTGTGG+TGG 0.602159 1:+90248255 None:intergenic
CGTAGTTGAGGGATCTGGGG+AGG 0.605945 1:+90248191 None:intergenic
GGCGACGTAGACGTTGATGC+CGG 0.610952 1:+90248216 None:intergenic
ATTTCAAAGGAGCCAAGCAT+CGG 0.613834 1:-90246753 MsG0180005320.01.T01:CDS
CCATTATCATAGACAAACAT+GGG 0.615762 1:+90244909 None:intergenic
CCCGGTGTAATCATGGAGGA+AGG 0.618450 1:-90245236 MsG0180005320.01.T01:CDS
AGGACCAGTAGCGGTTGAGG+AGG 0.619629 1:+90248167 None:intergenic
CGGAGGTGAAGGACCAGTAG+CGG 0.620085 1:+90248158 None:intergenic
GTGCGGAGTATTGGATCATG+GGG 0.622157 1:-90248027 MsG0180005320.01.T01:CDS
ACCATTATCATAGACAAACA+TGG 0.626090 1:+90244908 None:intergenic
TGTTAAAGATGAGATTGCCC+CGG 0.630173 1:-90246959 MsG0180005320.01.T01:CDS
AAGGCTTCCCTAATGCGACT+GGG 0.630631 1:-90245217 MsG0180005320.01.T01:CDS
GATCTATTGAATAATGAGCC+CGG 0.632256 1:-90245254 MsG0180005320.01.T01:CDS
CTGCACCATCCATAGGTACA+GGG 0.632850 1:+90244868 None:intergenic
TATGATAATGGTCATTCGGG+TGG 0.635201 1:-90244897 MsG0180005320.01.T01:CDS
AAGCATGGAATCGTTCTGGT+GGG 0.635217 1:-90247796 MsG0180005320.01.T01:CDS
CGAGAGAAAAGAAAACCACC+GGG 0.637673 1:-90244786 MsG0180005320.01.T01:CDS
TCGTCGGGAACCAACACACC+CGG 0.637725 1:+90244768 None:intergenic
GCTGCCGATTCGGGAATCGG+AGG 0.653431 1:+90248141 None:intergenic
GGCGAGAGCAATCAATACAA+GGG 0.664455 1:-90245196 MsG0180005320.01.T01:CDS
GCTCCCATTTGAAGGTACAG+TGG 0.671438 1:-90245060 MsG0180005320.01.T01:CDS
GGATTATCAGAGGCAGAGGG+AGG 0.675305 1:-90247843 MsG0180005320.01.T01:CDS
GACGTAGACGTTGATGCCGG+AGG 0.678769 1:+90248219 None:intergenic
GACCCAGTACGCAATTTCGT+CGG 0.680627 1:+90247992 None:intergenic
TGAGGATTATCAGAGGCAGA+GGG 0.682411 1:-90247846 MsG0180005320.01.T01:CDS
GTGTTGGATCATTTCAGACG+AGG 0.688231 1:+90246873 None:intergenic
ACCCACCAAAATCCACAACA+AGG 0.701202 1:+90246929 None:intergenic
TTGGGAATGAGGATTATCAG+AGG 0.702859 1:-90247853 MsG0180005320.01.T01:CDS
TGGCAGACCCAGTTGCAATG+TGG 0.723564 1:-90246984 MsG0180005320.01.T01:intron
TCGGGAACCAACACACCCGG+TGG 0.732190 1:+90244771 None:intergenic
TGAGCCCGGTGTAATCATGG+AGG 0.740721 1:-90245240 MsG0180005320.01.T01:CDS
AATTATCAAACAGTACAGTG+CGG 0.765872 1:-90248044 MsG0180005320.01.T01:CDS
TGCGGAGTATTGGATCATGG+GGG 0.774007 1:-90248026 MsG0180005320.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAAAATAATTAAAAA+TGG + Chr1:90248267-90248286 None:intergenic 0.0%
!! AATTAAAAATAATTAAAAAT+GGG + Chr1:90248266-90248285 None:intergenic 0.0%
!!! ATTTGATTTTTAGAATTTTT+TGG - Chr1:90248329-90248348 MsG0180005320.01.T01:CDS 10.0%
!!! ATTTTTGGAAAAAAAAAATA+GGG + Chr1:90247780-90247799 None:intergenic 10.0%
!! AAGTTATAATTATATCAATC+TGG - Chr1:90245474-90245493 MsG0180005320.01.T01:intron 15.0%
!! ACTTTGTAATTTAAAAAGTA+AGG + Chr1:90247701-90247720 None:intergenic 15.0%
!! AGTTATAATTATATCAATCT+GGG - Chr1:90245475-90245494 MsG0180005320.01.T01:intron 15.0%
!! ATAATTAAACATTATAGGAT+TGG + Chr1:90246256-90246275 None:intergenic 15.0%
!! ATTCCATTAAGTAAATTTAA+AGG + Chr1:90246020-90246039 None:intergenic 15.0%
!! TTTAAGTGATCAAATTTATT+GGG - Chr1:90245052-90245071 MsG0180005320.01.T01:CDS 15.0%
!!! AAAACTAATGCAAATTTTTT+CGG + Chr1:90248309-90248328 None:intergenic 15.0%
!!! ATTTAATTTACCAAATTTGT+TGG - Chr1:90247131-90247150 MsG0180005320.01.T01:intron 15.0%
!!! ATTTTCAAATTTTAAACCAA+CGG + Chr1:90245301-90245320 None:intergenic 15.0%
!!! CATTTTTGGAAAAAAAAAAT+AGG + Chr1:90247781-90247800 None:intergenic 15.0%
!!! TTTAATTTACCAAATTTGTT+GGG - Chr1:90247132-90247151 MsG0180005320.01.T01:intron 15.0%
!!! TTTTAAGTGATCAAATTTAT+TGG - Chr1:90245051-90245070 MsG0180005320.01.T01:CDS 15.0%
!!! TTTTTATGATTTTATTTGAC+AGG - Chr1:90248366-90248385 MsG0180005320.01.T01:CDS 15.0%
!! AACATATGAACATAACATTT+GGG + Chr1:90244486-90244505 None:intergenic 20.0%
!! ACTATGTTAGTAATATATTG+AGG - Chr1:90245984-90246003 MsG0180005320.01.T01:intron 20.0%
!! AGAAAATCAGAAAAAATTCA+AGG - Chr1:90248170-90248189 MsG0180005320.01.T01:CDS 20.0%
!! ATAGATGCAAAAATTTATGT+AGG - Chr1:90246279-90246298 MsG0180005320.01.T01:intron 20.0%
!! GAAAAATTGTTCAAATTACA+GGG - Chr1:90246361-90246380 MsG0180005320.01.T01:intron 20.0%
!! TGAAAAATTGTTCAAATTAC+AGG - Chr1:90246360-90246379 MsG0180005320.01.T01:intron 20.0%
!! TGACCTTTAAATTTACTTAA+TGG - Chr1:90246014-90246033 MsG0180005320.01.T01:intron 20.0%
!! TGATATAATTATAACTTCCT+GGG + Chr1:90245471-90245490 None:intergenic 20.0%
!! TTCTAAACATGTTTGTAATA+TGG - Chr1:90248020-90248039 MsG0180005320.01.T01:CDS 20.0%
!! TTGATATAATTATAACTTCC+TGG + Chr1:90245472-90245491 None:intergenic 20.0%
!!! AAAATGAATACGAATTTTTC+CGG - Chr1:90247859-90247878 MsG0180005320.01.T01:CDS 20.0%
!!! AAGGTGTTTTCTTTTATTAA+AGG - Chr1:90247831-90247850 MsG0180005320.01.T01:CDS 20.0%
!!! AGGTGTTTTCTTTTATTAAA+GGG - Chr1:90247832-90247851 MsG0180005320.01.T01:CDS 20.0%
!!! ATTTTATTTGACAGGTTTTT+AGG - Chr1:90248374-90248393 MsG0180005320.01.T01:CDS 20.0%
!!! ATTTTTCAGTAAGATTAACA+TGG + Chr1:90246348-90246367 None:intergenic 20.0%
!!! CATCTTTTATGACTTATAAT+TGG - Chr1:90245008-90245027 MsG0180005320.01.T01:CDS 20.0%
!!! TAATATGGATAGTCATTTTA+GGG - Chr1:90248035-90248054 MsG0180005320.01.T01:CDS 20.0%
!!! TACTAGTGCTTTTTTTTTTT+TGG - Chr1:90245726-90245745 MsG0180005320.01.T01:intron 20.0%
!!! TCATAGTAATGTTTTCATTA+TGG - Chr1:90247498-90247517 MsG0180005320.01.T01:intron 20.0%
!!! TTAGTGAAAAATCTTGTTTT+GGG - Chr1:90247586-90247605 MsG0180005320.01.T01:intron 20.0%
!!! TTATTGCTTTTTCATGTTTA+AGG - Chr1:90246067-90246086 MsG0180005320.01.T01:intron 20.0%
!!! TTGAATTTTTTCTGATTTTC+TGG + Chr1:90248171-90248190 None:intergenic 20.0%
!!! TTTAGTGAAAAATCTTGTTT+TGG - Chr1:90247585-90247604 MsG0180005320.01.T01:intron 20.0%
!!! TTTTCAAATTTTAAACCAAC+GGG + Chr1:90245300-90245319 None:intergenic 20.0%
! AAACACGTATATGATAAACA+AGG + Chr1:90244016-90244035 None:intergenic 25.0%
! AACACGTATATGATAAACAA+GGG + Chr1:90244015-90244034 None:intergenic 25.0%
! AATAAAAGAAAACACCTTTC+CGG + Chr1:90247829-90247848 None:intergenic 25.0%
! AATTTGATCACTTAAAACCA+TGG + Chr1:90245048-90245067 None:intergenic 25.0%
! ACATATGAACATAACATTTG+GGG + Chr1:90244485-90244504 None:intergenic 25.0%
! ATAAGAGTGATTGAATAGTT+AGG + Chr1:90245276-90245295 None:intergenic 25.0%
! ATTAAGCCGAAAACAATTTA+TGG - Chr1:90244301-90244320 MsG0180005320.01.T01:intron 25.0%
! CAACATATGAACATAACATT+TGG + Chr1:90244487-90244506 None:intergenic 25.0%
! CACTAATACACTATAATCAA+TGG + Chr1:90245380-90245399 None:intergenic 25.0%
! CAGTTATATGTGTTCATATT+TGG - Chr1:90246969-90246988 MsG0180005320.01.T01:CDS 25.0%
! CTCTGTAATGTTAAAAAGTA+AGG + Chr1:90245649-90245668 None:intergenic 25.0%
! GAATAAAGTTCCAAAAGAAA+AGG + Chr1:90247072-90247091 None:intergenic 25.0%
! GATATAATTATAACTTCCTG+GGG + Chr1:90245470-90245489 None:intergenic 25.0%
! GTTACTCTTTACAAAAGTAA+TGG - Chr1:90245748-90245767 MsG0180005320.01.T01:intron 25.0%
! GTTAGTAATATATTGAGGAT+TGG - Chr1:90245989-90246008 MsG0180005320.01.T01:intron 25.0%
! GTTTATCATATACGTGTTTA+TGG - Chr1:90244017-90244036 MsG0180005320.01.T01:intron 25.0%
! TGGAAATTCAGTAAATTCTA+AGG + Chr1:90243582-90243601 None:intergenic 25.0%
! TTACAAAAGTAATGGTTCAA+AGG - Chr1:90245756-90245775 MsG0180005320.01.T01:intron 25.0%
!! AACTGTTTTACCTTGAAAAA+TGG + Chr1:90247967-90247986 None:intergenic 25.0%
!! AAGTGATGATTTTTATCTAG+TGG + Chr1:90245353-90245372 None:intergenic 25.0%
!! ACATGTCCATAAATTGTTTT+CGG + Chr1:90244310-90244329 None:intergenic 25.0%
!! ACTGTTTTACCTTGAAAAAT+GGG + Chr1:90247966-90247985 None:intergenic 25.0%
!! TTTTCAATGTTATAAGTGTG+TGG - Chr1:90245568-90245587 MsG0180005320.01.T01:intron 25.0%
!! TTTTCTTTTCTCTCGAATTA+TGG + Chr1:90246872-90246891 None:intergenic 25.0%
!!! AAAAAAGCACTAGTAAACAT+CGG + Chr1:90245721-90245740 None:intergenic 25.0%
!!! AACTTGTTTTGTTACTGTTA+TGG - Chr1:90243947-90243966 MsG0180005320.01.T01:intron 25.0%
!!! AATAGTTAGGCTTTTGTTTT+GGG + Chr1:90245263-90245282 None:intergenic 25.0%
!!! ATAAGCTATTTCTACAACAA+AGG - Chr1:90244040-90244059 MsG0180005320.01.T01:intron 25.0%
!!! ATGAAATTTTGGAATTTGAG+GGG + Chr1:90248235-90248254 None:intergenic 25.0%
!!! ATTCTAGAACATAATGTTGA+TGG - Chr1:90246122-90246141 MsG0180005320.01.T01:intron 25.0%
!!! CAATAATAAGGCTTTTGTTT+TGG + Chr1:90247327-90247346 None:intergenic 25.0%
!!! CTGTTATGGTTTTGAATTTT+TGG - Chr1:90243961-90243980 MsG0180005320.01.T01:intron 25.0%
!!! GATGAAATTTTGGAATTTGA+GGG + Chr1:90248236-90248255 None:intergenic 25.0%
!!! GTAATATGGATAGTCATTTT+AGG - Chr1:90248034-90248053 MsG0180005320.01.T01:CDS 25.0%
!!! TGTTTCTGGATTACATAATT+CGG - Chr1:90247926-90247945 MsG0180005320.01.T01:CDS 25.0%
!!! TGTTTGATAATTGGATTTTC+CGG + Chr1:90243611-90243630 None:intergenic 25.0%
!!! TTATCAAATTTTCAAGCAAG+AGG + Chr1:90247363-90247382 None:intergenic 25.0%
!!! TTTTTCAAGGTAAAACAGTT+CGG - Chr1:90247967-90247986 MsG0180005320.01.T01:CDS 25.0%
AAAAAGAAACAATACTGACC+CGG + Chr1:90244938-90244957 None:intergenic 30.0%
AAATTGTTCAAATTACAGGG+AGG - Chr1:90246364-90246383 MsG0180005320.01.T01:intron 30.0%
AAGCATTCAGTAAAATTTCC+TGG + Chr1:90247555-90247574 None:intergenic 30.0%
AATTATCAAACAGTACAGTG+CGG - Chr1:90243619-90243638 MsG0180005320.01.T01:intron 30.0%
ACCATTATCATAGACAAACA+TGG + Chr1:90246758-90246777 None:intergenic 30.0%
ACCTGTTCTTAGTCAAAAAT+CGG - Chr1:90248107-90248126 MsG0180005320.01.T01:CDS 30.0%
ATCCGGAAACTTCAAAAAAT+AGG - Chr1:90247890-90247909 MsG0180005320.01.T01:CDS 30.0%
ATTGAAAAACTAGCAAGTGA+TGG + Chr1:90247451-90247470 None:intergenic 30.0%
CACTACATTAAGTGCTTATT+TGG + Chr1:90244370-90244389 None:intergenic 30.0%
CATATGAACATAACATTTGG+GGG + Chr1:90244484-90244503 None:intergenic 30.0%
CCAAAGAGGAGAAAAATAAA+AGG + Chr1:90246182-90246201 None:intergenic 30.0%
CCATTATCATAGACAAACAT+GGG + Chr1:90246757-90246776 None:intergenic 30.0%
TAAATAGTTGACATCCTTGA+GGG - Chr1:90246145-90246164 MsG0180005320.01.T01:intron 30.0%
TATAAGCCCTTATGCTAAAA+GGG + Chr1:90244191-90244210 None:intergenic 30.0%
TATGTAGGTATTCATCTAAC+AGG - Chr1:90246294-90246313 MsG0180005320.01.T01:intron 30.0%
TCCGGAAACTTCAAAAAATA+GGG - Chr1:90247891-90247910 MsG0180005320.01.T01:CDS 30.0%
TGCATGTGTGAAAATGTAAA+AGG - Chr1:90244575-90244594 MsG0180005320.01.T01:intron 30.0%
TTAAGCTATTTATCCAAGCA+TGG + Chr1:90243987-90244006 None:intergenic 30.0%
TTATAAAATCCGGAAACTCA+AGG + Chr1:90247805-90247824 None:intergenic 30.0%
TTATAAGCCCTTATGCTAAA+AGG + Chr1:90244192-90244211 None:intergenic 30.0%
TTTAAGTACATTGACATCGT+CGG + Chr1:90246914-90246933 None:intergenic 30.0%
TTTGAATGGCATCAAAAAGT+CGG + Chr1:90246546-90246565 None:intergenic 30.0%
! AAAGTAAGGTCTTATGTATG+CGG + Chr1:90245635-90245654 None:intergenic 30.0%
! ACTGTTTTCGTAACTTATCA+TGG - Chr1:90244266-90244285 MsG0180005320.01.T01:intron 30.0%
! AGTTTCCGGATTTTATAATC+CGG - Chr1:90247807-90247826 MsG0180005320.01.T01:CDS 30.0%
! ATTATGGCTTCTTTTATCGT+TGG + Chr1:90246856-90246875 None:intergenic 30.0%
! CTGTCATTTAAGAATGTTCA+AGG - Chr1:90244398-90244417 MsG0180005320.01.T01:intron 30.0%
! TGTTTTCTGACAAATGCAAA+CGG + Chr1:90244869-90244888 None:intergenic 30.0%
! TTAGTCAAAAATCGGGTTTT+CGG - Chr1:90248115-90248134 MsG0180005320.01.T01:CDS 30.0%
! TTTTCAGTTTTTGTAGCAGT+TGG - Chr1:90246637-90246656 MsG0180005320.01.T01:intron 30.0%
! TTTTTCCGGATTTTGTAATC+CGG - Chr1:90247873-90247892 MsG0180005320.01.T01:CDS 30.0%
!! AATTTACCAAATTTGTTGGG+TGG - Chr1:90247135-90247154 MsG0180005320.01.T01:intron 30.0%
!! ATTTACTTTTCCCATCATGT+GGG - Chr1:90247742-90247761 MsG0180005320.01.T01:intron 30.0%
!! GAATAGTTAGGCTTTTGTTT+TGG + Chr1:90245264-90245283 None:intergenic 30.0%
!! GTTAAAACTGAAGCATTGTT+TGG - Chr1:90244659-90244678 MsG0180005320.01.T01:intron 30.0%
!! GTTGTTTTCGTAAGAATTGT+AGG - Chr1:90244141-90244160 MsG0180005320.01.T01:intron 30.0%
!! GTTTGATAATTGGATTTTCC+GGG + Chr1:90243610-90243629 None:intergenic 30.0%
!! TGTCTATGATAATGGTCATT+CGG - Chr1:90246762-90246781 MsG0180005320.01.T01:CDS 30.0%
!! TTCAGTAAATTCTAAGGCTT+TGG + Chr1:90243576-90243595 None:intergenic 30.0%
!! TTGTTGTTGTTCTTTGGAAT+TGG + Chr1:90243299-90243318 None:intergenic 30.0%
!!! AAATTCTAAGGCTTTGGTTT+TGG + Chr1:90243570-90243589 None:intergenic 30.0%
!!! CATCACAATGGTTTTTTTGT+TGG - Chr1:90247003-90247022 MsG0180005320.01.T01:intron 30.0%
!!! CCTTTTATTTTTCTCCTCTT+TGG - Chr1:90246179-90246198 MsG0180005320.01.T01:intron 30.0%
!!! CGATGAAATTTTGGAATTTG+AGG + Chr1:90248237-90248256 None:intergenic 30.0%
!!! TTTTTTGTTGGATGTCGTAT+AGG - Chr1:90247015-90247034 MsG0180005320.01.T01:intron 30.0%
AAAACACCACCCAACAAATT+TGG + Chr1:90247144-90247163 None:intergenic 35.0%
AAAATCCACAACAAGGAGAA+TGG + Chr1:90244730-90244749 None:intergenic 35.0%
AAAGTAATGGTTCAAAGGCT+AGG - Chr1:90245761-90245780 MsG0180005320.01.T01:intron 35.0%
AACAATGACCCAAAAACAGA+AGG + Chr1:90248087-90248106 None:intergenic 35.0%
AACTTATCATGGAGAGCTTA+TGG - Chr1:90244277-90244296 MsG0180005320.01.T01:intron 35.0%
AAGGTATGCAAGGATAGTAA+TGG + Chr1:90247053-90247072 None:intergenic 35.0%
AAGTTTGCAAATTGCAAGCA+CGG + Chr1:90243932-90243951 None:intergenic 35.0%
ACCTTGAAAAATGGGTGTTT+AGG + Chr1:90247958-90247977 None:intergenic 35.0%
ACTTATCATGGAGAGCTTAT+GGG - Chr1:90244278-90244297 MsG0180005320.01.T01:intron 35.0%
AGGTATGCAAAGACTTTGAA+TGG + Chr1:90246560-90246579 None:intergenic 35.0%
AGTTTCCGGATTACAAAATC+CGG + Chr1:90247881-90247900 None:intergenic 35.0%
ATGGTGCAGTGAATCATATA+TGG - Chr1:90246809-90246828 MsG0180005320.01.T01:CDS 35.0%
ATGTATGCGGCATAAATGTT+GGG + Chr1:90247674-90247693 None:intergenic 35.0%
CAAAAATGTCCTTGAGTTTC+CGG - Chr1:90247793-90247812 MsG0180005320.01.T01:CDS 35.0%
CACAACCTTCTCTATTTCAA+AGG - Chr1:90244897-90244916 MsG0180005320.01.T01:CDS 35.0%
CATATTATTTCACACACACC+AGG - Chr1:90247534-90247553 MsG0180005320.01.T01:intron 35.0%
CCCATGTTTGTCTATGATAA+TGG - Chr1:90246754-90246773 MsG0180005320.01.T01:CDS 35.0%
CCTGTTCTTAGTCAAAAATC+GGG - Chr1:90248108-90248127 MsG0180005320.01.T01:CDS 35.0%
CCTTGAAAAATGGGTGTTTA+GGG + Chr1:90247957-90247976 None:intergenic 35.0%
CCTTTCCGGATTATAAAATC+CGG + Chr1:90247815-90247834 None:intergenic 35.0%
CTTGAAAAATGGGTGTTTAG+GGG + Chr1:90247956-90247975 None:intergenic 35.0%
GACATGTTCAAAAGATTCTC+AGG + Chr1:90244117-90244136 None:intergenic 35.0%
GAGCATAGTTCCAAAAGAAA+AGG + Chr1:90244977-90244996 None:intergenic 35.0%
GATCTATTGAATAATGAGCC+CGG - Chr1:90246409-90246428 MsG0180005320.01.T01:intron 35.0%
GATGTAAAGAGCAATATCAC+AGG + Chr1:90247393-90247412 None:intergenic 35.0%
GCACTCATAGTAGCAAAAAA+CGG + Chr1:90243746-90243765 None:intergenic 35.0%
GGTTTCATGTTATAAGTGTG+TGG - Chr1:90247620-90247639 MsG0180005320.01.T01:intron 35.0%
GTAAATAGTTGACATCCTTG+AGG - Chr1:90246144-90246163 MsG0180005320.01.T01:intron 35.0%
TATGTATGCGGCATAAATGT+TGG + Chr1:90247675-90247694 None:intergenic 35.0%
TGTATGCATAGCTGCAATAA+GGG - Chr1:90244438-90244457 MsG0180005320.01.T01:intron 35.0%
TGTCAGAAAATCTCAGTTGT+GGG - Chr1:90245144-90245163 MsG0180005320.01.T01:CDS 35.0%
TTAAGTACATTGACATCGTC+GGG + Chr1:90246913-90246932 None:intergenic 35.0%
TTACAGAAACTTGAGTGTGT+TGG + Chr1:90244809-90244828 None:intergenic 35.0%
TTCTAGCATCTTTCATGACT+TGG - Chr1:90247089-90247108 MsG0180005320.01.T01:intron 35.0%
TTGAAAAATGGGTGTTTAGG+GGG + Chr1:90247955-90247974 None:intergenic 35.0%
TTGTCAGAAAATCTCAGTTG+TGG - Chr1:90245143-90245162 MsG0180005320.01.T01:CDS 35.0%
TTGTGAAGAAAACGAAAGCA+TGG - Chr1:90243852-90243871 MsG0180005320.01.T01:intron 35.0%
TTTCGTAAGAATTGTAGGCT+CGG - Chr1:90244146-90244165 MsG0180005320.01.T01:intron 35.0%
! ATAATTGGATTTTCCGGGTA+TGG + Chr1:90243605-90243624 None:intergenic 35.0%
! ATGAAGAAGAGAAAGAGTGT+GGG + Chr1:90243338-90243357 None:intergenic 35.0%
! CTTATGCCCTTTTAGCATAA+GGG - Chr1:90244182-90244201 MsG0180005320.01.T01:intron 35.0%
! CTTTGAGAACCAATAACAAG+AGG - Chr1:90245595-90245614 MsG0180005320.01.T01:intron 35.0%
! CTTTTATCGTTGGCAACTTT+TGG + Chr1:90246846-90246865 None:intergenic 35.0%
! GCACTGTACTGTTTGATAAT+TGG + Chr1:90243620-90243639 None:intergenic 35.0%
! GGGTCTAAACGATGAAATTT+TGG + Chr1:90248246-90248265 None:intergenic 35.0%
! GTGTTGATCATGATGATGTT+GGG - Chr1:90244531-90244550 MsG0180005320.01.T01:intron 35.0%
! GTTCTTTTCTTTCTGTGTCA+TGG - Chr1:90245079-90245098 MsG0180005320.01.T01:CDS 35.0%
! GTTTTCTGACAAATGCAAAC+GGG + Chr1:90244868-90244887 None:intergenic 35.0%
! TAGTCAAAAATCGGGTTTTC+GGG - Chr1:90248116-90248135 MsG0180005320.01.T01:CDS 35.0%
! TCCAAAAGAAAAGGTATGCA+AGG + Chr1:90247063-90247082 None:intergenic 35.0%
! TCCTTGCATACCTTTTCTTT+TGG - Chr1:90247059-90247078 MsG0180005320.01.T01:intron 35.0%
! TGTGTTGATCATGATGATGT+TGG - Chr1:90244530-90244549 MsG0180005320.01.T01:intron 35.0%
! TTTTCTGACAAATGCAAACG+GGG + Chr1:90244867-90244886 None:intergenic 35.0%
!! AGTTAGTCTTTGGAATTGTC+AGG - Chr1:90244632-90244651 MsG0180005320.01.T01:intron 35.0%
!! ATGAGTGCTGAATTGCAATT+GGG - Chr1:90243758-90243777 MsG0180005320.01.T01:intron 35.0%
!! ATTCTCCTTGTTGTGGATTT+TGG - Chr1:90244729-90244748 MsG0180005320.01.T01:intron 35.0%
!! CTCTTGTTATTGGTTCTCAA+AGG + Chr1:90245597-90245616 None:intergenic 35.0%
!! CTGATTTTCTGGTGAAGTTT+CGG + Chr1:90248160-90248179 None:intergenic 35.0%
!! GATTTACTTTTCCCATCATG+TGG - Chr1:90247741-90247760 MsG0180005320.01.T01:intron 35.0%
!! GGGTCAGTATTGTTTCTTTT+TGG - Chr1:90244937-90244956 MsG0180005320.01.T01:CDS 35.0%
!! GTCTATGATAATGGTCATTC+GGG - Chr1:90246763-90246782 MsG0180005320.01.T01:CDS 35.0%
!! TATGAGTGCTGAATTGCAAT+TGG - Chr1:90243757-90243776 MsG0180005320.01.T01:intron 35.0%
!! TTGTTGTTCTTTGGAATTGG+AGG + Chr1:90243296-90243315 None:intergenic 35.0%
!!! AAATTTTGGAATTTGAGGGG+TGG + Chr1:90248232-90248251 None:intergenic 35.0%
!!! GCCCTATTTTTTGAAGTTTC+CGG + Chr1:90247895-90247914 None:intergenic 35.0%
!!! TAAGGCTTTTGTTTTGGAGA+TGG + Chr1:90247321-90247340 None:intergenic 35.0%
!!! TTTGAATTTTTGGCCATGCT+TGG - Chr1:90243971-90243990 MsG0180005320.01.T01:intron 35.0%
AAAACAGAAGGATGGGAGTT+AGG + Chr1:90248075-90248094 None:intergenic 40.0%
AACATAGAGCTCCCATTTGA+AGG - Chr1:90246595-90246614 MsG0180005320.01.T01:intron 40.0%
AGATGATTGACTATCCAGCT+TGG + Chr1:90246676-90246695 None:intergenic 40.0%
AGGCTCATATATGACCAAAG+AGG + Chr1:90246196-90246215 None:intergenic 40.0%
AGTCCACTGTACCTTCAAAT+GGG + Chr1:90246609-90246628 None:intergenic 40.0%
ATCAAAAAGTCGGCATGAAG+TGG + Chr1:90246536-90246555 None:intergenic 40.0%
ATGACCCAAAAACAGAAGGA+TGG + Chr1:90248083-90248102 None:intergenic 40.0%
ATGATGTTGGGAACAATGAG+AGG - Chr1:90244543-90244562 MsG0180005320.01.T01:intron 40.0%
ATGTTGTCGCTGACAATAAC+AGG + Chr1:90246580-90246599 None:intergenic 40.0%
ATTTCAAAGGAGCCAAGCAT+CGG - Chr1:90244910-90244929 MsG0180005320.01.T01:CDS 40.0%
CATCGGAGATGAATTCTGAT+AGG + Chr1:90245704-90245723 None:intergenic 40.0%
CATTTCAGACGAGGTACAAT+TGG + Chr1:90244784-90244803 None:intergenic 40.0%
CCAAAGACTAACTCATAAGC+TGG + Chr1:90244625-90244644 None:intergenic 40.0%
CCAGCTATGAGTAATATCAC+AGG + Chr1:90245325-90245344 None:intergenic 40.0%
CCTAGTTAGAGAGAAGTTGT+GGG - Chr1:90246387-90246406 MsG0180005320.01.T01:intron 40.0%
CCTGTGATATTACTCATAGC+TGG - Chr1:90245322-90245341 MsG0180005320.01.T01:intron 40.0%
CTGTATGCATAGCTGCAATA+AGG - Chr1:90244437-90244456 MsG0180005320.01.T01:intron 40.0%
GAGCAAAAACAATTCAGCTG+AGG + Chr1:90246216-90246235 None:intergenic 40.0%
GATCACTTAAAACCATGGAG+TGG + Chr1:90245043-90245062 None:intergenic 40.0%
GATGAAGAAGAGAAAGAGTG+TGG + Chr1:90243339-90243358 None:intergenic 40.0%
GTTCAGAGATTGCATCACAA+TGG - Chr1:90246991-90247010 MsG0180005320.01.T01:intron 40.0%
TAACATAGTGTGACCCAAGT+GGG + Chr1:90245973-90245992 None:intergenic 40.0%
TAACATGCCACATTGCAACT+GGG + Chr1:90244689-90244708 None:intergenic 40.0%
TACTGAATTTCCACCATACC+CGG - Chr1:90243589-90243608 MsG0180005320.01.T01:intron 40.0%
TAGTCCACTGTACCTTCAAA+TGG + Chr1:90246610-90246629 None:intergenic 40.0%
TCAAAAAGTCGGCATGAAGT+GGG + Chr1:90246535-90246554 None:intergenic 40.0%
TCGAGAGAAAAGAAAACCAC+CGG - Chr1:90246876-90246895 MsG0180005320.01.T01:CDS 40.0%
TGACCCAAAAACAGAAGGAT+GGG + Chr1:90248082-90248101 None:intergenic 40.0%
TGCTGAATTGCAATTGGGTA+TGG - Chr1:90243763-90243782 MsG0180005320.01.T01:intron 40.0%
TGTTAAAGATGAGATTGCCC+CGG - Chr1:90244704-90244723 MsG0180005320.01.T01:intron 40.0%
TTAACATGCCACATTGCAAC+TGG + Chr1:90244690-90244709 None:intergenic 40.0%
TTGGGAATGAGGATTATCAG+AGG - Chr1:90243810-90243829 MsG0180005320.01.T01:intron 40.0%
! AACTCCCATCCTTCTGTTTT+TGG - Chr1:90248075-90248094 MsG0180005320.01.T01:CDS 40.0%
! AATGTTGGGCCTCTTGTTAT+TGG + Chr1:90247660-90247679 None:intergenic 40.0%
! CAGCTAAGATTAGCTGACAA+TGG + Chr1:90247211-90247230 None:intergenic 40.0%
! CCGGATTTTATAATCCGGAA+AGG - Chr1:90247812-90247831 MsG0180005320.01.T01:CDS 40.0%
! CGGAAACTCAAGGACATTTT+TGG + Chr1:90247795-90247814 None:intergenic 40.0%
! GCTTATGCCCTTTTAGCATA+AGG - Chr1:90244181-90244200 MsG0180005320.01.T01:intron 40.0%
! TAACAGGAGTGTGATTATGC+TGG - Chr1:90246310-90246329 MsG0180005320.01.T01:intron 40.0%
! TAAGAATTGTAGGCTCGGTT+TGG - Chr1:90244151-90244170 MsG0180005320.01.T01:intron 40.0%
! TAAGGTCTTATGTATGTGCC+AGG + Chr1:90245631-90245650 None:intergenic 40.0%
! TCCAAAAGAAAAGGCATGCA+AGG + Chr1:90244968-90244987 None:intergenic 40.0%
!! ACTCCCATCCTTCTGTTTTT+GGG - Chr1:90248076-90248095 MsG0180005320.01.T01:CDS 40.0%
!! CCAGCTTATGAGTTAGTCTT+TGG - Chr1:90244622-90244641 MsG0180005320.01.T01:intron 40.0%
!! CCCGATTTTTGACTAAGAAC+AGG + Chr1:90248111-90248130 None:intergenic 40.0%
!! CCCTAAACACCCATTTTTCA+AGG - Chr1:90247954-90247973 MsG0180005320.01.T01:CDS 40.0%
!! GAAAGGGGTTTTTAGGAAGA+AGG - Chr1:90243787-90243806 MsG0180005320.01.T01:intron 40.0%
!! GATCATGTGTTTGTTGTCAC+TGG - Chr1:90243893-90243912 MsG0180005320.01.T01:intron 40.0%
!! GGAGCATTGTTGTTGTTCTT+TGG + Chr1:90243305-90243324 None:intergenic 40.0%
!! GGGTTTTTAGGAAGAAGGTT+GGG - Chr1:90243792-90243811 MsG0180005320.01.T01:intron 40.0%
!! TATGATAATGGTCATTCGGG+TGG - Chr1:90246766-90246785 MsG0180005320.01.T01:CDS 40.0%
!! TCCTTGTTGTGGATTTTGGT+GGG - Chr1:90244733-90244752 MsG0180005320.01.T01:intron 40.0%
!! TGGCTCCTTTGAAATAGAGA+AGG + Chr1:90244905-90244924 None:intergenic 40.0%
!!! GTCTCATGGTACTTTTTCTG+TGG - Chr1:90247165-90247184 MsG0180005320.01.T01:intron 40.0%
!!! TTAGGCTTTTGTTTTGGGAG+TGG + Chr1:90245258-90245277 None:intergenic 40.0%
!!! TTGTTTTGGGAAGCATGCAT+TGG - Chr1:90247599-90247618 MsG0180005320.01.T01:intron 40.0%
AAAGCATGGAATCGTTCTGG+TGG - Chr1:90243866-90243885 MsG0180005320.01.T01:intron 45.0%
AACAGTACAGTGCGGAGTAT+TGG - Chr1:90243627-90243646 MsG0180005320.01.T01:intron 45.0%
AAGCATGGAATCGTTCTGGT+GGG - Chr1:90243867-90243886 MsG0180005320.01.T01:intron 45.0%
AATGGTCATTCGGGTGGTAT+TGG - Chr1:90246772-90246791 MsG0180005320.01.T01:CDS 45.0%
ACCCACCAAAATCCACAACA+AGG + Chr1:90244737-90244756 None:intergenic 45.0%
ACTTCCTGGGGTGTATGAAA+TGG + Chr1:90245458-90245477 None:intergenic 45.0%
AGGACCATGATTCCCATAGA+AGG - Chr1:90248190-90248209 MsG0180005320.01.T01:CDS 45.0%
AGTCACTTACTTGCGCATGA+AGG - Chr1:90247718-90247737 MsG0180005320.01.T01:intron 45.0%
AGTCCCTTCTATGGGAATCA+TGG + Chr1:90248197-90248216 None:intergenic 45.0%
ATGAGGATTATCAGAGGCAG+AGG - Chr1:90243816-90243835 MsG0180005320.01.T01:intron 45.0%
CATGGCACTTGTTCTTTGTG+TGG - Chr1:90245097-90245116 MsG0180005320.01.T01:CDS 45.0%
CCATAGAAGGGACTTCTTAC+GGG - Chr1:90248203-90248222 MsG0180005320.01.T01:CDS 45.0%
CCCACAACTTCTCTCTAACT+AGG + Chr1:90246390-90246409 None:intergenic 45.0%
CCCATAGAAGGGACTTCTTA+CGG - Chr1:90248202-90248221 MsG0180005320.01.T01:CDS 45.0%
CCGTAAGAAGTCCCTTCTAT+GGG + Chr1:90248205-90248224 None:intergenic 45.0%
CGAGAGAAAAGAAAACCACC+GGG - Chr1:90246877-90246896 MsG0180005320.01.T01:CDS 45.0%
CTAACATAGTGTGACCCAAG+TGG + Chr1:90245974-90245993 None:intergenic 45.0%
GAAGAACGTGAGAGAGAGAA+TGG + Chr1:90243369-90243388 None:intergenic 45.0%
GCCTAGTTAGAGAGAAGTTG+TGG - Chr1:90246386-90246405 MsG0180005320.01.T01:intron 45.0%
GGACCATGATTCCCATAGAA+GGG - Chr1:90248191-90248210 MsG0180005320.01.T01:CDS 45.0%
GGCACGTTACATGATGTTTC+TGG - Chr1:90247912-90247931 MsG0180005320.01.T01:CDS 45.0%
GGCGAGAGCAATCAATACAA+GGG - Chr1:90246467-90246486 MsG0180005320.01.T01:intron 45.0%
GTACTGGGTCGTTTGCAAAA+CGG - Chr1:90243684-90243703 MsG0180005320.01.T01:intron 45.0%
GTCACTTACTTGCGCATGAA+GGG - Chr1:90247719-90247738 MsG0180005320.01.T01:intron 45.0%
GTCTGTTAGCTGCAATATGC+TGG + Chr1:90245909-90245928 None:intergenic 45.0%
GTGATGCACTTAAACCAAGC+TGG - Chr1:90246659-90246678 MsG0180005320.01.T01:intron 45.0%
GTGTTGGATCATTTCAGACG+AGG + Chr1:90244793-90244812 None:intergenic 45.0%
TAATGAGCCCGGTGTAATCA+TGG - Chr1:90246420-90246439 MsG0180005320.01.T01:intron 45.0%
TACTGGGTCGTTTGCAAAAC+GGG - Chr1:90243685-90243704 MsG0180005320.01.T01:intron 45.0%
TAGGAAGAAGGTTGGGAATG+AGG - Chr1:90243799-90243818 MsG0180005320.01.T01:intron 45.0%
TCAATCACTCTTATGCCCGT+TGG - Chr1:90245282-90245301 MsG0180005320.01.T01:CDS 45.0%
TGAGGATTATCAGAGGCAGA+GGG - Chr1:90243817-90243836 MsG0180005320.01.T01:intron 45.0%
TGATTCACTGCACCATCCAT+AGG + Chr1:90246805-90246824 None:intergenic 45.0%
TGCAATTGGGTATGGCGAAA+GGG - Chr1:90243771-90243790 MsG0180005320.01.T01:intron 45.0%
TGGACTCTTTATCCACTCCA+TGG - Chr1:90245028-90245047 MsG0180005320.01.T01:CDS 45.0%
TTGCAATTGGGTATGGCGAA+AGG - Chr1:90243770-90243789 MsG0180005320.01.T01:intron 45.0%
! AAGAGAGAGTGAAGAGTGTG+TGG + Chr1:90243414-90243433 None:intergenic 45.0%
! AAGAGTGTGGGAATGGAGAA+TGG + Chr1:90243326-90243345 None:intergenic 45.0%
! ACGAAAGCATGGAATCGTTC+TGG - Chr1:90243863-90243882 MsG0180005320.01.T01:intron 45.0%
! AGCACCAAAATGATGGAACG+TGG + Chr1:90245950-90245969 None:intergenic 45.0%
! AGCGTTGAGCCTCTTGTTAT+TGG + Chr1:90245607-90245626 None:intergenic 45.0%
! ATTGGATTTTCCGGGTATGG+TGG + Chr1:90243602-90243621 None:intergenic 45.0%
! GAAGAGAAAGAGTGTGGGAA+TGG + Chr1:90243333-90243352 None:intergenic 45.0%
! GCCTTGCATGCCTTTTCTTT+TGG - Chr1:90244964-90244983 MsG0180005320.01.T01:CDS 45.0%
! GTAGCCACGTTCCATCATTT+TGG - Chr1:90245943-90245962 MsG0180005320.01.T01:intron 45.0%
! GTATGGCGAAAGGGGTTTTT+AGG - Chr1:90243780-90243799 MsG0180005320.01.T01:intron 45.0%
!! AAGTGGGAGCACCAAAATGA+TGG + Chr1:90245957-90245976 None:intergenic 45.0%
!! AGTGCGGAGTATTGGATCAT+GGG - Chr1:90243635-90243654 MsG0180005320.01.T01:intron 45.0%
!! CTCCTTGTTGTGGATTTTGG+TGG - Chr1:90244732-90244751 MsG0180005320.01.T01:intron 45.0%
!! GGGGTTTTTAGGAAGAAGGT+TGG - Chr1:90243791-90243810 MsG0180005320.01.T01:intron 45.0%
!! TGGGTGGTGTTTTTGTCTCA+TGG - Chr1:90247151-90247170 MsG0180005320.01.T01:intron 45.0%
!! TTGTTGTGGATTTTGGTGGG+TGG - Chr1:90244736-90244755 MsG0180005320.01.T01:intron 45.0%
!!! ATCATTTTGGTGCTCCCACT+TGG - Chr1:90245956-90245975 MsG0180005320.01.T01:intron 45.0%
!!! TCATTTTGGTGCTCCCACTT+GGG - Chr1:90245957-90245976 MsG0180005320.01.T01:intron 45.0%
!! ATAAAAATAATTCAATAATA+AGG + Chr1:90247339-90247358 None:intergenic 5.0%
!!! ATTTTATAATTAAACATTAT+AGG + Chr1:90246261-90246280 None:intergenic 5.0%
AAGAAAACCACCGGGTGTGT+TGG - Chr1:90246885-90246904 MsG0180005320.01.T01:CDS 50.0%
AAGGCTTCCCTAATGCGACT+GGG - Chr1:90246446-90246465 MsG0180005320.01.T01:intron 50.0%
ACACCGACGAAATTGCGTAC+TGG - Chr1:90243668-90243687 MsG0180005320.01.T01:intron 50.0%
ACTGCACCATCCATAGGTAC+AGG + Chr1:90246799-90246818 None:intergenic 50.0%
AGACACGTTCCGCCAAAACA+TGG - Chr1:90246720-90246739 MsG0180005320.01.T01:intron 50.0%
AGGCAGAGAATTCACCCTCA+AGG + Chr1:90246162-90246181 None:intergenic 50.0%
ATTGGCCCTGTACCTATGGA+TGG - Chr1:90246790-90246809 MsG0180005320.01.T01:CDS 50.0%
CACAACTCTCAACTTGGAGC+GGG - Chr1:90245879-90245898 MsG0180005320.01.T01:intron 50.0%
CACCGACGAAATTGCGTACT+GGG - Chr1:90243669-90243688 MsG0180005320.01.T01:intron 50.0%
CCCGTAAGAAGTCCCTTCTA+TGG + Chr1:90248206-90248225 None:intergenic 50.0%
CCTTCCTCCATGATTACACC+GGG + Chr1:90246430-90246449 None:intergenic 50.0%
CGCGAGAAAACCCACATGAT+GGG + Chr1:90247755-90247774 None:intergenic 50.0%
CGGGGTAGAAGATGTGTGTA+CGG + Chr1:90244849-90244868 None:intergenic 50.0%
CTCACGCACAACTCTCAACT+TGG - Chr1:90245873-90245892 MsG0180005320.01.T01:intron 50.0%
CTGCACCATCCATAGGTACA+GGG + Chr1:90246798-90246817 None:intergenic 50.0%
GACCCAGTACGCAATTTCGT+CGG + Chr1:90243674-90243693 None:intergenic 50.0%
GCAATTGGGTATGGCGAAAG+GGG - Chr1:90243772-90243791 MsG0180005320.01.T01:intron 50.0%
GCACAACTCTCAACTTGGAG+CGG - Chr1:90245878-90245897 MsG0180005320.01.T01:intron 50.0%
GCCTTCCTCCATGATTACAC+CGG + Chr1:90246431-90246450 None:intergenic 50.0%
GGGCGAGAGCAATCAATACA+AGG - Chr1:90246466-90246485 MsG0180005320.01.T01:intron 50.0%
TCCACAACAAGGAGAATGGC+CGG + Chr1:90244726-90244745 None:intergenic 50.0%
TCTCTTCAACCAACCACCTC+CGG - Chr1:90243428-90243447 MsG0180005320.01.T01:intron 50.0%
TTCACCTCCGATTCCCGAAT+CGG - Chr1:90243518-90243537 MsG0180005320.01.T01:intron 50.0%
! AGAGAGTGAAGAGTGTGTGG+TGG + Chr1:90243411-90243430 None:intergenic 50.0%
! ATCCGAGTTTTGCCTGCATC+CGG - Chr1:90246498-90246517 MsG0180005320.01.T01:intron 50.0%
! CAAGTTGAGAGTTGTGCGTG+AGG + Chr1:90245875-90245894 None:intergenic 50.0%
! CATGCCATTTCATACACCCC+AGG - Chr1:90245451-90245470 MsG0180005320.01.T01:intron 50.0%
! GAACGTGGCTACAGCTTGTT+TGG + Chr1:90245935-90245954 None:intergenic 50.0%
! GCTCCCATTTGAAGGTACAG+TGG - Chr1:90246603-90246622 MsG0180005320.01.T01:intron 50.0%
!! CAGTGCGGAGTATTGGATCA+TGG - Chr1:90243634-90243653 MsG0180005320.01.T01:intron 50.0%
!! GTGCGGAGTATTGGATCATG+GGG - Chr1:90243636-90243655 MsG0180005320.01.T01:intron 50.0%
!! TGCGGAGTATTGGATCATGG+GGG - Chr1:90243637-90243656 MsG0180005320.01.T01:intron 50.0%
!! TGGTATTGGCCCTGTACCTA+TGG - Chr1:90246786-90246805 MsG0180005320.01.T01:CDS 50.0%
!! TTTTGGGAGTGGCGACAGTA+GGG + Chr1:90245247-90245266 None:intergenic 50.0%
ACAAGAGGCTCAACGCTTCC+TGG - Chr1:90245610-90245629 MsG0180005320.01.T01:intron 55.0%
AGCCGGATGCAGGCAAAACT+CGG + Chr1:90246503-90246522 None:intergenic 55.0%
AGGGCGTAGTTGAGGGATCT+GGG + Chr1:90243479-90243498 None:intergenic 55.0%
CACAACAAGGAGAATGGCCG+GGG + Chr1:90244724-90244743 None:intergenic 55.0%
CACAGAGCAGCGAATACCTC+TGG + Chr1:90245845-90245864 None:intergenic 55.0%
CACTTCCAGTCCACTAAGCC+CGG + Chr1:90245791-90245810 None:intergenic 55.0%
CCACAACAAGGAGAATGGCC+GGG + Chr1:90244725-90244744 None:intergenic 55.0%
CCCGGTGTAATCATGGAGGA+AGG - Chr1:90246427-90246446 MsG0180005320.01.T01:intron 55.0%
CCTGTAGTCCCTCCACTGTT+GGG - Chr1:90245817-90245836 MsG0180005320.01.T01:intron 55.0%
GAAGGCTTCCCTAATGCGAC+TGG - Chr1:90246445-90246464 MsG0180005320.01.T01:intron 55.0%
GATTCGGGAATCGGAGGTGA+AGG + Chr1:90243519-90243538 None:intergenic 55.0%
GCGCGAGAAAACCCACATGA+TGG + Chr1:90247756-90247775 None:intergenic 55.0%
GGATTATCAGAGGCAGAGGG+AGG - Chr1:90243820-90243839 MsG0180005320.01.T01:intron 55.0%
GGTTCAAAGGCTAGGCTCAC+CGG - Chr1:90245769-90245788 MsG0180005320.01.T01:intron 55.0%
GTTCAAAGGCTAGGCTCACC+GGG - Chr1:90245770-90245789 MsG0180005320.01.T01:intron 55.0%
TGAAGGACCAGTAGCGGTTG+AGG + Chr1:90243502-90243521 None:intergenic 55.0%
TGAGCCCGGTGTAATCATGG+AGG - Chr1:90246423-90246442 MsG0180005320.01.T01:intron 55.0%
TGGCAGACCCAGTTGCAATG+TGG - Chr1:90244679-90244698 MsG0180005320.01.T01:intron 55.0%
TTGAGAGTTGTGCGTGAGGC+TGG + Chr1:90245871-90245890 None:intergenic 55.0%
TTTGGGAGTGGCGACAGTAG+GGG + Chr1:90245246-90245265 None:intergenic 55.0%
! AGTTTTGCCTGCATCCGGCT+GGG - Chr1:90246503-90246522 MsG0180005320.01.T01:intron 55.0%
! ATACCTCTGGCTCCCAACAG+TGG + Chr1:90245832-90245851 None:intergenic 55.0%
! GAGTGAAGAGTGTGTGGTGG+TGG + Chr1:90243408-90243427 None:intergenic 55.0%
! GCTGCACTCGAGCCATGTTT+TGG + Chr1:90246735-90246754 None:intergenic 55.0%
! GTGGCTACAGCTTGTTTGGC+TGG + Chr1:90245931-90245950 None:intergenic 55.0%
! GTTGAGGAGGGCGTAGTTGA+GGG + Chr1:90243486-90243505 None:intergenic 55.0%
!! AGAGTGTGTGGTGGTGGTGT+AGG + Chr1:90243402-90243421 None:intergenic 55.0%
!! GCACTCGAGCCATGTTTTGG+CGG + Chr1:90246732-90246751 None:intergenic 55.0%
!!! GTTTTGGGAGTGGCGACAGT+AGG + Chr1:90245248-90245267 None:intergenic 55.0%
ACGTTGATGCCGGAGGTGGT+TGG + Chr1:90243440-90243459 None:intergenic 60.0%
ACTCTCAACTTGGAGCGGGC+AGG - Chr1:90245883-90245902 MsG0180005320.01.T01:intron 60.0%
AGGACCAGTAGCGGTTGAGG+AGG + Chr1:90243499-90243518 None:intergenic 60.0%
CCCAACAGTGGAGGGACTAC+AGG + Chr1:90245820-90245839 None:intergenic 60.0%
CCCGGCCATTCTCCTTGTTG+TGG - Chr1:90244722-90244741 MsG0180005320.01.T01:intron 60.0%
CGGAGGTGAAGGACCAGTAG+CGG + Chr1:90243508-90243527 None:intergenic 60.0%
CGTAGTTGAGGGATCTGGGG+AGG + Chr1:90243475-90243494 None:intergenic 60.0%
GACGTAGACGTTGATGCCGG+AGG + Chr1:90243447-90243466 None:intergenic 60.0%
GCCTGTAGTCCCTCCACTGT+TGG - Chr1:90245816-90245835 MsG0180005320.01.T01:intron 60.0%
GCTCTCGCCCAGTCGCATTA+GGG + Chr1:90246456-90246475 None:intergenic 60.0%
GGACCAGTAGCGGTTGAGGA+GGG + Chr1:90243498-90243517 None:intergenic 60.0%
GGCGACGTAGACGTTGATGC+CGG + Chr1:90243450-90243469 None:intergenic 60.0%
GGGCGTAGTTGAGGGATCTG+GGG + Chr1:90243478-90243497 None:intergenic 60.0%
GTAGACGTTGATGCCGGAGG+TGG + Chr1:90243444-90243463 None:intergenic 60.0%
GTTGAGGGATCTGGGGAGGT+CGG + Chr1:90243471-90243490 None:intergenic 60.0%
TCGTCGGGAACCAACACACC+CGG + Chr1:90246898-90246917 None:intergenic 60.0%
TGCTCTCGCCCAGTCGCATT+AGG + Chr1:90246457-90246476 None:intergenic 60.0%
! CTCTGGCTCCCAACAGTGGA+GGG + Chr1:90245828-90245847 None:intergenic 60.0%
! GAGGGCGTAGTTGAGGGATC+TGG + Chr1:90243480-90243499 None:intergenic 60.0%
! GAGTTTTGCCTGCATCCGGC+TGG - Chr1:90246502-90246521 MsG0180005320.01.T01:intron 60.0%
! GATCGACGTCGCTGCCGATT+CGG + Chr1:90243535-90243554 None:intergenic 60.0%
! GGTTGAGGAGGGCGTAGTTG+AGG + Chr1:90243487-90243506 None:intergenic 60.0%
! GTTTTGCCTGCATCCGGCTG+GGG - Chr1:90246504-90246523 MsG0180005320.01.T01:intron 60.0%
!! AAGGAGCCAAGCATCGGCAC+CGG - Chr1:90244916-90244935 MsG0180005320.01.T01:CDS 60.0%
!! ATCGACGTCGCTGCCGATTC+GGG + Chr1:90243534-90243553 None:intergenic 60.0%
!! GTCGCTGCCGATTCGGGAAT+CGG + Chr1:90243528-90243547 None:intergenic 60.0%
!! GTGTGTGGTGGTGGTGTAGG+AGG + Chr1:90243399-90243418 None:intergenic 60.0%
ACGCCCTCCTCAACCGCTAC+TGG - Chr1:90243492-90243511 MsG0180005320.01.T01:intron 65.0%
CCTCCACTGTTGGGAGCCAG+AGG - Chr1:90245826-90245845 MsG0180005320.01.T01:intron 65.0%
GAAGTGGGTGTGTCCCCAGC+CGG + Chr1:90246520-90246539 None:intergenic 65.0%
GCTAGGCTCACCGGGCTTAG+TGG - Chr1:90245778-90245797 MsG0180005320.01.T01:intron 65.0%
TCGGGAACCAACACACCCGG+TGG + Chr1:90246895-90246914 None:intergenic 65.0%
! CCTCTGGCTCCCAACAGTGG+AGG + Chr1:90245829-90245848 None:intergenic 65.0%
! GCTCACCGGGCTTAGTGGAC+TGG - Chr1:90245783-90245802 MsG0180005320.01.T01:intron 65.0%
!! ACTGACCCGGTGCCGATGCT+TGG + Chr1:90244925-90244944 None:intergenic 65.0%
!! AGGAGCCAAGCATCGGCACC+GGG - Chr1:90244917-90244936 MsG0180005320.01.T01:CDS 65.0%
!! GCTGCCGATTCGGGAATCGG+AGG + Chr1:90243525-90243544 None:intergenic 65.0%
GTGTGTCCCCAGCCGGATGC+AGG + Chr1:90246513-90246532 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 90243290 90248395 90243290 ID=MsG0180005320.01;Name=MsG0180005320.01
Chr1 mRNA 90243290 90248395 90243290 ID=MsG0180005320.01.T01;Parent=MsG0180005320.01;Name=MsG0180005320.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|0.66|0.5|4|0|479
Chr1 exon 90247771 90248395 90247771 ID=MsG0180005320.01.T01:exon:17394;Parent=MsG0180005320.01.T01
Chr1 exon 90246747 90247000 90246747 ID=MsG0180005320.01.T01:exon:17393;Parent=MsG0180005320.01.T01
Chr1 exon 90244751 90245303 90244751 ID=MsG0180005320.01.T01:exon:17392;Parent=MsG0180005320.01.T01
Chr1 exon 90243290 90243297 90243290 ID=MsG0180005320.01.T01:exon:17391;Parent=MsG0180005320.01.T01
Chr1 CDS 90247771 90248395 90247771 ID=MsG0180005320.01.T01:cds;Parent=MsG0180005320.01.T01
Chr1 CDS 90246747 90247000 90246747 ID=MsG0180005320.01.T01:cds;Parent=MsG0180005320.01.T01
Chr1 CDS 90244751 90245303 90244751 ID=MsG0180005320.01.T01:cds;Parent=MsG0180005320.01.T01
Chr1 CDS 90243290 90243297 90243290 ID=MsG0180005320.01.T01:cds;Parent=MsG0180005320.01.T01
Gene Sequence

>MsG0180005320.01.T01

ATGCCTCCAATTCCAAAGAACAACAACAATGCTCCATTCTCCATTCCCACACTCTTTCTCTTCTTCATCATCATCTCCATTCTCTCTCTCACGTTCTTCTTCTTCTCCTCCTACACCACCACCACACACTCTTCACTCTCTCTTCAACCAACCACCTCCGGCATCAACGTCTACGTCGCCGACCTCCCCAGATCCCTCAACTACGCCCTCCTCAACCGCTACTGGTCCTTCACCTCCGATTCCCGAATCGGCAGCGACGTCGATCGTGAAATTCGATCCAAAACCAAAGCCTTAGAATTTACTGAATTTCCACCATACCCGGAAAATCCAATTATCAAACAGTACAGTGCGGAGTATTGGATCATGGGGGATCTTGTTACACCGACGAAATTGCGTACTGGGTCGTTTGCAAAACGGGTTTTTGATGAACGTGATGCTGATGTTGTTTTTGTTCCGTTTTTTGCTACTATGAGTGCTGAATTGCAATTGGGTATGGCGAAAGGGGTTTTTAGGAAGAAGGTTGGGAATGAGGATTATCAGAGGCAGAGGGAGGTTGTTGATTTTGTGAAGAAAACGAAAGCATGGAATCGTTCTGGTGGGAGAGATCATGTGTTTGTTGTCACTGACCCAGTTGCAATGTGGCATGTTAAAGATGAGATTGCCCCGGCCATTCTCCTTGTTGTGGATTTTGGTGGGTGGTATAGACTTGACTCAAAATCATCCAATTGTACCTCGTCTGAAATGATCCAACACACTCAAGTTTCTGTAATTAAAGACGTGATTGTGCCGTACACACATCTTCTACCCCGTTTGCATTTGTCAGAAAACAAGCAGCGTCACAACCTTCTCTATTTCAAAGGAGCCAAGCATCGGCACCGGGGAGGCCTAGTTAGAGAGAAGTTGTGGGATCTATTGAATAATGAGCCCGGTGTAATCATGGAGGAAGGCTTCCCTAATGCGACTGGGCGAGAGCAATCAATACAAGGGATGAGAACATCCGAGTTTTGCCTGCATCCGGCTGGGGACACACCCACTTCATGCCGACTTTTTGATGCCATTCAAAGTCTTTGCATACCTGTTATTGTCAGCGACAACATAGAGCTCCCATTTGAAGGTACAGTGGACTATACAGAATTTTCAGTTTTTGTAGCAGTTGGTGATGCACTTAAACCAAGCTGGATAGTCAATCATCTTCAAAGCTTTTCAAAAAAGCAGAAAGACACGTTCCGCCAAAACATGGCTCGAGTGCAGCCCATGTTTGTCTATGATAATGGTCATTCGGGTGGTATTGGCCCTGTACCTATGGATGGTGCAGTGAATCATATATGGAAGAAAGTTCACCAAAAGTTGCCAACGATAAAAGAAGCCATAATTCGAGAGAAAAGAAAACCACCGGGTGTGTTGGTTCCCGACGATGTCAATGTACTTAAAAGTTTTTAG
Protein sequence

>MsG0180005320.01.T01

MPPIPKNNNNAPFSIPTLFLFFIIISILSLTFFFFSSYTTTTHSSLSLQPTTSGINVYVADLPRSLNYALLNRYWSFTSDSRIGSDVDREIRSKTKALEFTEFPPYPENPIIKQYSAEYWIMGDLVTPTKLRTGSFAKRVFDERDADVVFVPFFATMSAELQLGMAKGVFRKKVGNEDYQRQREVVDFVKKTKAWNRSGGRDHVFVVTDPVAMWHVKDEIAPAILLVVDFGGWYRLDSKSSNCTSSEMIQHTQVSVIKDVIVPYTHLLPRLHLSENKQRHNLLYFKGAKHRHRGGLVREKLWDLLNNEPGVIMEEGFPNATGREQSIQGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGTVDYTEFSVFVAVGDALKPSWIVNHLQSFSKKQKDTFRQNMARVQPMFVYDNGHSGGIGPVPMDGAVNHIWKKVHQKLPTIKEAIIREKRKPPGVLVPDDVNVLKSF*