AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034759.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034759.01.T01 MTR_6g074910 99.815 541 1 0 4 544 48 588 0.0 1116
MsG0680034759.01.T01 MTR_5g077170 77.901 543 118 1 4 544 49 591 0.0 892
MsG0680034759.01.T01 MTR_4g053270 47.514 543 279 3 4 544 51 589 0.0 526
MsG0680034759.01.T01 MTR_8g088730 38.980 549 319 6 4 544 49 589 1.39e-133 401
MsG0680034759.01.T01 MTR_2g006300 40.146 548 312 7 4 544 45 583 2.13e-133 400
MsG0680034759.01.T01 MTR_8g016270 34.465 589 328 7 7 544 67 648 1.75e-124 379
MsG0680034759.01.T01 MTR_1g014080 33.049 587 339 8 7 544 56 637 9.79e-110 341
MsG0680034759.01.T01 MTR_3g105950 32.709 587 341 7 7 544 55 636 1.85e-109 340
MsG0680034759.01.T01 MTR_5g098730 27.018 607 367 14 7 544 66 665 8.52e-75 250
MsG0680034759.01.T01 MTR_3g082140 26.689 607 369 13 7 544 60 659 2.03e-74 249
MsG0680034759.01.T01 MTR_0204s0010 30.110 455 289 9 108 544 5 448 3.76e-73 240
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034759.01.T01 AT2G01970 88.745 542 60 1 4 544 51 592 0.0 981
MsG0680034759.01.T01 AT1G14670 88.007 542 64 1 4 544 51 592 0.0 949
MsG0680034759.01.T01 AT5G37310 84.133 542 85 1 4 544 52 593 0.0 927
MsG0680034759.01.T01 AT5G37310 84.133 542 85 1 4 544 52 593 0.0 927
MsG0680034759.01.T01 AT1G08350 50.184 544 265 4 4 544 49 589 0.0 578
MsG0680034759.01.T01 AT1G08350 50.184 544 265 4 4 544 49 589 0.0 578
MsG0680034759.01.T01 AT1G08350 48.924 511 255 4 37 544 1 508 0.0 530
MsG0680034759.01.T01 AT1G08350 49.364 472 234 3 4 472 49 518 6.31e-170 492
MsG0680034759.01.T01 AT1G10950 39.122 547 319 6 4 544 51 589 3.25e-131 395
MsG0680034759.01.T01 AT3G13772 32.598 589 339 7 7 544 60 641 1.56e-118 364
MsG0680034759.01.T01 AT1G55130 33.616 589 333 7 7 544 56 637 4.55e-118 362
MsG0680034759.01.T01 AT2G24170 33.447 589 334 6 7 544 56 637 4.62e-116 357
MsG0680034759.01.T01 AT5G10840 32.483 588 342 7 7 544 66 648 1.21e-109 341
MsG0680034759.01.T01 AT5G25100 32.034 590 344 6 7 544 67 651 3.47e-109 340
MsG0680034759.01.T01 AT5G25100 32.034 590 344 6 7 544 60 644 4.05e-109 340
MsG0680034759.01.T01 AT5G35160 27.377 610 364 15 7 544 56 658 6.87e-71 239
MsG0680034759.01.T01 AT5G35160 27.377 610 364 15 7 544 56 658 6.87e-71 239
MsG0680034759.01.T01 AT5G35160 27.377 610 364 15 7 544 56 658 6.87e-71 239
MsG0680034759.01.T01 AT5G35160 26.968 597 358 14 19 544 41 630 8.51e-67 228
MsG0680034759.01.T01 AT4G12650 29.237 472 308 10 88 544 192 652 7.35e-63 218
MsG0680034759.01.T01 AT2G24170 29.114 395 223 5 7 350 56 444 2.43e-58 201

Find 145 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATGATGATTTGCCTATT+TGG 0.197680 6:+94084432 MsG0680034759.01.T01:CDS
ATTATATATTTGCCAGTGTC+TGG 0.215685 6:+94085797 MsG0680034759.01.T01:CDS
TTATGATGATTTGCCTATTT+GGG 0.236802 6:+94084433 MsG0680034759.01.T01:CDS
TCAAGAGTTTAGTTAAAATA+TGG 0.271153 6:-94087329 None:intergenic
GGTTCATTTGAACGCAATTC+TGG 0.272718 6:+94087367 MsG0680034759.01.T01:three_prime_UTR
TCTTATTGTCTTCATTTCAT+AGG 0.299928 6:+94087171 MsG0680034759.01.T01:three_prime_UTR
TTGCCTATTTGGGGTTTCAT+AGG 0.302131 6:+94084443 MsG0680034759.01.T01:CDS
CTTGTATTGGGAGGGATTGC+TGG 0.316117 6:+94085628 MsG0680034759.01.T01:CDS
TACGTCTCCTCTACTTGTAT+TGG 0.316329 6:+94085615 MsG0680034759.01.T01:CDS
GTTATATATGCACTCACTTC+AGG 0.319264 6:+94085288 MsG0680034759.01.T01:CDS
TCCTCCTTTGCCATGGTATC+GGG 0.329441 6:+94085711 MsG0680034759.01.T01:CDS
TTCTTGATGCTTGGAACTGT+TGG 0.329989 6:+94087077 MsG0680034759.01.T01:CDS
TTCCTATGCGGTGGTTCAAC+TGG 0.342782 6:+94086942 MsG0680034759.01.T01:CDS
TACGGTGTTCATATTCATAT+TGG 0.349084 6:+94085209 MsG0680034759.01.T01:CDS
ACGTCTCCTCTACTTGTATT+GGG 0.350290 6:+94085616 MsG0680034759.01.T01:CDS
TGTTATAAAATATATCAAAA+TGG 0.350719 6:-94084526 None:intergenic
AACCAACCTGGTATACAAAA+TGG 0.355606 6:-94083274 None:intergenic
ACTTGACAAAATCATTCTTA+AGG 0.370613 6:-94084808 None:intergenic
GTAACATCCACAAGGGCATT+TGG 0.374033 6:-94084584 None:intergenic
AAATGCCTACTCGCACTTGA+TGG 0.387744 6:-94087141 None:intergenic
TCTGTATTTGCAGCAGCTCT+TGG 0.397933 6:+94085043 MsG0680034759.01.T01:CDS
ATATTCATATTGGCACTTGT+TGG 0.402301 6:+94085219 MsG0680034759.01.T01:CDS
TTCCTCCTTTGCCATGGTAT+CGG 0.402307 6:+94085710 MsG0680034759.01.T01:CDS
TGAGGAGACTGCAGAGGATC+AGG 0.408156 6:+94084964 MsG0680034759.01.T01:CDS
TTCCCTATGAAACCCCAAAT+AGG 0.409018 6:-94084446 None:intergenic
TTTGCAGCAGCTCTTGGATC+TGG 0.409525 6:+94085049 MsG0680034759.01.T01:CDS
ACCAGTGGATTTCCAAATGA+TGG 0.412001 6:-94084715 None:intergenic
GCACTCACTTCAGGAATTGC+TGG 0.413621 6:+94085297 MsG0680034759.01.T01:CDS
GTCAACTGGAAGGAACAAAC+TGG 0.416389 6:+94085343 MsG0680034759.01.T01:CDS
TTTGGTTTCTTCTTGATGCT+TGG 0.416603 6:+94087068 MsG0680034759.01.T01:CDS
GTCCTCGCTACCCCATCATT+TGG 0.419122 6:+94084703 MsG0680034759.01.T01:CDS
TACATGGCCTGCATATGCTT+TGG 0.422165 6:+94087050 MsG0680034759.01.T01:CDS
CACTGGGTGAAGTGTTGAAT+GGG 0.423169 6:+94084270 MsG0680034759.01.T01:CDS
TTATATATTTGCCAGTGTCT+GGG 0.430768 6:+94085798 MsG0680034759.01.T01:CDS
TTTCATAGGGAAGGTTGATA+AGG 0.446067 6:+94084457 MsG0680034759.01.T01:CDS
GGATATTTAGTTGTGCGGAC+TGG 0.447634 6:-94085679 None:intergenic
TCGTCGTTATAGTTCTCATA+TGG 0.450168 6:+94085584 MsG0680034759.01.T01:CDS
TGCAAATACAGATTTGAACT+TGG 0.452592 6:-94085032 None:intergenic
GTCACAGTCCTCCTCTTGAC+TGG 0.456631 6:+94084758 MsG0680034759.01.T01:CDS
TAACGACGATTGTGCCGAAT+GGG 0.458192 6:-94085570 None:intergenic
TATATAAGAGAAGCTGGGTT+GGG 0.458343 6:+94087236 MsG0680034759.01.T01:three_prime_UTR
GAAATAGAGGCCCACAGAAA+AGG 0.459642 6:-94085492 None:intergenic
GTGTACTATATAAGAGAAGC+TGG 0.466139 6:+94087230 MsG0680034759.01.T01:three_prime_UTR
TATGCCCGCTCTGATATGTC+TGG 0.469076 6:+94086999 MsG0680034759.01.T01:CDS
AAGCAAAATGTAAGAAATAG+AGG 0.470399 6:-94085505 None:intergenic
CCCATCATTTGGAAATCCAC+TGG 0.476786 6:+94084714 MsG0680034759.01.T01:CDS
GAAAGAGAAGAAAGAAGCAC+TGG 0.478603 6:+94084253 MsG0680034759.01.T01:CDS
ATAGTAGTAATACAGACAAT+AGG 0.479087 6:-94086979 None:intergenic
TGTGATCTAACAAGTTGCTC+TGG 0.487264 6:-94087273 None:intergenic
TACGTCATTCTATTGTCAAC+TGG 0.491307 6:+94085329 MsG0680034759.01.T01:CDS
AATAGAGCCCCTCGGTTGTA+CGG 0.492094 6:-94085252 None:intergenic
AACTCACAGGGTAAACAGTT+GGG 0.494448 6:-94085074 None:intergenic
CTATATAAGAGAAGCTGGGT+TGG 0.497740 6:+94087235 MsG0680034759.01.T01:three_prime_UTR
TTGTATTGGGAGGGATTGCT+GGG 0.499754 6:+94085629 MsG0680034759.01.T01:CDS
GCAAATACAGATTTGAACTT+GGG 0.506096 6:-94085031 None:intergenic
AATTCTGTGGCCCCAGACAC+TGG 0.506214 6:-94085809 None:intergenic
TATTTGGGGTTTCATAGGGA+AGG 0.508176 6:+94084448 MsG0680034759.01.T01:CDS
AGGATCAGGAAGAGACTGGC+TGG 0.510925 6:+94084978 MsG0680034759.01.T01:CDS
TGCCTATTTGGGGTTTCATA+GGG 0.512616 6:+94084444 MsG0680034759.01.T01:CDS
GCTACTGCCGCTCTCCCATT+CGG 0.515377 6:+94085556 MsG0680034759.01.T01:CDS
CCAGTGGATTTCCAAATGAT+GGG 0.517728 6:-94084714 None:intergenic
CAAAATGGATGTGCTTGTAA+AGG 0.520184 6:-94084511 None:intergenic
ATAGGGAAGGTTGATAAGGA+GGG 0.521709 6:+94084461 MsG0680034759.01.T01:CDS
CTCCTCTACTTGTATTGGGA+GGG 0.524300 6:+94085620 MsG0680034759.01.T01:CDS
GGCAAAGGAGGAATCTCCCT+TGG 0.527338 6:-94085700 None:intergenic
GACACTTACAAAAGAAGAAG+TGG 0.527829 6:+94084364 MsG0680034759.01.T01:CDS
CATGATCTTCAGCAGCAAGC+TGG 0.529624 6:-94085915 None:intergenic
CCCTTGGATATTTAGTTGTG+CGG 0.531342 6:-94085684 None:intergenic
AAACTCACAGGGTAAACAGT+TGG 0.533116 6:-94085075 None:intergenic
AGTGTTGAATGGGGATAGGT+TGG 0.533187 6:+94084280 MsG0680034759.01.T01:CDS
TATGATGATTTGCCTATTTG+GGG 0.533815 6:+94084434 MsG0680034759.01.T01:CDS
TTTCTATACTGTGAAATGGA+AGG 0.537931 6:+94084634 MsG0680034759.01.T01:CDS
ATTCCTCAGATGGCAATGGC+AGG 0.540197 6:+94085739 MsG0680034759.01.T01:CDS
CATAGGGAAGGTTGATAAGG+AGG 0.540980 6:+94084460 MsG0680034759.01.T01:CDS
TAGTTGTGCGGACTGGAGCT+TGG 0.548078 6:-94085672 None:intergenic
GCACTGGGTGAAGTGTTGAA+TGG 0.549117 6:+94084269 MsG0680034759.01.T01:CDS
AAATGATGGGGTAGCGAGGA+CGG 0.550197 6:-94084701 None:intergenic
GCAGAGGATCAGGAAGAGAC+TGG 0.553267 6:+94084974 MsG0680034759.01.T01:CDS
AGGTAGTATCTATAATCACT+AGG 0.554450 6:-94084491 None:intergenic
TATATATTTGCCAGTGTCTG+GGG 0.557505 6:+94085799 MsG0680034759.01.T01:CDS
TAAGAGAAGCTGGGTTGGGT+GGG 0.560617 6:+94087240 MsG0680034759.01.T01:three_prime_UTR
AGGCCCACAGAAAAGGCATC+CGG 0.561889 6:-94085485 None:intergenic
GAAGAAACCAAAGCATATGC+AGG 0.562481 6:-94087057 None:intergenic
CCCCGATACCATGGCAAAGG+AGG 0.562801 6:-94085712 None:intergenic
GGTAGTATCTATAATCACTA+GGG 0.562961 6:-94084490 None:intergenic
ATAAGAGAAGCTGGGTTGGG+TGG 0.563871 6:+94087239 MsG0680034759.01.T01:three_prime_UTR
CTGAAGATCATGAATGGTGG+TGG 0.564533 6:+94085926 MsG0680034759.01.T01:CDS
TACAGATCATTCCTATGCGG+TGG 0.566423 6:+94086933 MsG0680034759.01.T01:intron
ATAACGACGATTGTGCCGAA+TGG 0.568167 6:-94085571 None:intergenic
ATCCCTCCCAATACAAGTAG+AGG 0.569721 6:-94085622 None:intergenic
CACTCCCTTCGAGAAGCGGA+TGG 0.569874 6:+94084664 MsG0680034759.01.T01:CDS
TTGTCCATCCGCTTCTCGAA+GGG 0.570473 6:-94084668 None:intergenic
GTGAAGTGTTGAATGGGGAT+AGG 0.575284 6:+94084276 MsG0680034759.01.T01:CDS
TGTTACTGCTTTCATTACTG+TGG 0.578518 6:+94085879 MsG0680034759.01.T01:CDS
GAAACCAGACATATCAGAGC+GGG 0.578972 6:-94087003 None:intergenic
AACGGATCCAAATGCCCTTG+TGG 0.580190 6:+94084577 MsG0680034759.01.T01:CDS
CTTGTCCATCCGCTTCTCGA+AGG 0.580261 6:-94084669 None:intergenic
TCGGGGAGCAATTCCTCAGA+TGG 0.580703 6:+94085729 MsG0680034759.01.T01:CDS
TTGCTGCTGAAGATCATGAA+TGG 0.582525 6:+94085920 MsG0680034759.01.T01:CDS
AATCCTGCCATTGCCATCTG+AGG 0.585284 6:-94085742 None:intergenic
CCTACTCGCACTTGATGGAT+CGG 0.585534 6:-94087136 None:intergenic
CTAACACTCCCTTCGAGAAG+CGG 0.587277 6:+94084660 MsG0680034759.01.T01:CDS
GGGAGATTCCTCCTTTGCCA+TGG 0.590122 6:+94085704 MsG0680034759.01.T01:CDS
TCCGCACAACTAAATATCCA+AGG 0.591816 6:+94085683 MsG0680034759.01.T01:CDS
TCTCCTCTACTTGTATTGGG+AGG 0.599263 6:+94085619 MsG0680034759.01.T01:CDS
GTTCGGAATCTACTATTGAC+CGG 0.603844 6:+94085466 MsG0680034759.01.T01:CDS
TTGCAAGAAAACCAGTCAAG+AGG 0.612188 6:-94084769 None:intergenic
CCTCCTTTGCCATGGTATCG+GGG 0.612898 6:+94085712 MsG0680034759.01.T01:CDS
GCTCCCCGATACCATGGCAA+AGG 0.619903 6:-94085715 None:intergenic
TTCCAAATGATGGGGTAGCG+AGG 0.620376 6:-94084705 None:intergenic
TCGATGTAAATAGCACTGAA+AGG 0.620759 6:-94085769 None:intergenic
AAACAGGTATGCACATGATG+AGG 0.621763 6:+94084946 MsG0680034759.01.T01:intron
CCGATCCATCAAGTGCGAGT+AGG 0.623339 6:+94087136 MsG0680034759.01.T01:CDS
GGAATTGCTCCCCGATACCA+TGG 0.625145 6:-94085721 None:intergenic
AATTGATAATCGAAAACCAG+TGG 0.626537 6:-94084730 None:intergenic
TGTACTATATAAGAGAAGCT+GGG 0.628958 6:+94087231 MsG0680034759.01.T01:three_prime_UTR
ACTTGATGGATCGGTATATG+TGG 0.631167 6:-94087127 None:intergenic
CAAGAAAACCAGTCAAGAGG+AGG 0.631428 6:-94084766 None:intergenic
TCATTCTATTGTCAACTGGA+AGG 0.632693 6:+94085333 MsG0680034759.01.T01:CDS
AGCAATTCCTCAGATGGCAA+TGG 0.634595 6:+94085735 MsG0680034759.01.T01:CDS
AAGATCATGAATGGTGGTGG+AGG 0.635786 6:+94085929 MsG0680034759.01.T01:CDS
TATTGAGATCAATGTGCGAA+CGG 0.636703 6:+94084559 MsG0680034759.01.T01:CDS
ATCCAGTTGAACCACCGCAT+AGG 0.639943 6:-94086944 None:intergenic
GATTGTGCCGAATGGGAGAG+CGG 0.641080 6:-94085563 None:intergenic
GTGCAGTGAATAGAGCCCCT+CGG 0.643541 6:-94085260 None:intergenic
TAGGGAAGGTTGATAAGGAG+GGG 0.648260 6:+94084462 MsG0680034759.01.T01:CDS
TGCCCTTGTGGATGTTACAG+AGG 0.650587 6:+94084589 MsG0680034759.01.T01:CDS
AAAAGACAAGGACTCTGTGT+CGG 0.658291 6:+94084331 MsG0680034759.01.T01:CDS
CTGCTGAAGATCATGAATGG+TGG 0.659388 6:+94085923 MsG0680034759.01.T01:CDS
CCGCACAACTAAATATCCAA+GGG 0.660490 6:+94085684 MsG0680034759.01.T01:CDS
CAGTGGATTTCCAAATGATG+GGG 0.661541 6:-94084713 None:intergenic
TGATGGATCGGTATATGTGG+CGG 0.664035 6:-94087124 None:intergenic
TGTCCTCTGTAACATCCACA+AGG 0.669975 6:-94084592 None:intergenic
AAAGAGAAGAAAGAAGCACT+GGG 0.674148 6:+94084254 MsG0680034759.01.T01:CDS
GGACAAAGAACAATGCTGCA+CGG 0.675721 6:-94087103 None:intergenic
TCAACTGGAAGGAACAAACT+GGG 0.689021 6:+94085344 MsG0680034759.01.T01:CDS
CCTTACAGATCATTCCTATG+CGG 0.691017 6:+94086930 MsG0680034759.01.T01:intron
TGTAGATTGTGTAAATTCTG+TGG 0.694009 6:-94085822 None:intergenic
ACATGATGAGGAGACTGCAG+AGG 0.702295 6:+94084958 MsG0680034759.01.T01:CDS
TGAAACCAGACATATCAGAG+CGG 0.704567 6:-94087004 None:intergenic
GATTGCTGGGAAGAACAGCA+AGG 0.708765 6:+94085642 MsG0680034759.01.T01:CDS
ACTGGCTGGAAATACATCCA+CGG 0.709634 6:+94084992 MsG0680034759.01.T01:CDS
GTCCTCTGTAACATCCACAA+GGG 0.709898 6:-94084591 None:intergenic
GTAGTAGTCCTTACGAACAG+CGG 0.726687 6:-94084399 None:intergenic
ACTGGGTGAAGTGTTGAATG+GGG 0.747764 6:+94084271 MsG0680034759.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTATAAAATATATCAAAA+TGG - Chr6:94084529-94084548 None:intergenic 10.0%
!!! AATGTTTAATTTTTAAATCA+TGG + Chr6:94083467-94083486 MsG0680034759.01.T01:intron 10.0%
!!! ATTTTAACAAAATAATAAAC+TGG - Chr6:94086281-94086300 None:intergenic 10.0%
!!! TTTTGATATATTTTATAACA+AGG + Chr6:94084529-94084548 MsG0680034759.01.T01:CDS 10.0%
!! AAAAAAAACACAAATAGAAA+AGG - Chr6:94084840-94084859 None:intergenic 15.0%
!! TAAGTAGTAAATATGAATTA+TGG + Chr6:94086117-94086136 MsG0680034759.01.T01:intron 15.0%
!!! AAGTTTTAATTTTTAAATCG+TGG + Chr6:94083338-94083357 MsG0680034759.01.T01:intron 15.0%
!!! ATGCAAATGTTTTAAAATAT+CGG + Chr6:94083727-94083746 MsG0680034759.01.T01:intron 15.0%
!!! ATTTTGAGATATTTTCTTTT+TGG + Chr6:94084192-94084211 MsG0680034759.01.T01:intron 15.0%
!!! TCTTGAAATACTTTATTTTT+GGG + Chr6:94087346-94087365 MsG0680034759.01.T01:three_prime_UTR 15.0%
!!! TTTCTATTTGTGTTTTTTTT+TGG + Chr6:94084840-94084859 MsG0680034759.01.T01:intron 15.0%
!!! TTTTAAATCATGGTTATTTA+GGG + Chr6:94083477-94083496 MsG0680034759.01.T01:intron 15.0%
!!! TTTTGAGATATTTTCTTTTT+GGG + Chr6:94084193-94084212 MsG0680034759.01.T01:intron 15.0%
!!! TTTTTAAATCATGGTTATTT+AGG + Chr6:94083476-94083495 MsG0680034759.01.T01:intron 15.0%
!! AAACAATAAACCATAGAAAT+TGG - Chr6:94085992-94086011 None:intergenic 20.0%
!! AAATCATGATGTTAAAACAT+GGG + Chr6:94083846-94083865 MsG0680034759.01.T01:intron 20.0%
!! AATTAAAGAAAACTCATTTC+AGG + Chr6:94085120-94085139 MsG0680034759.01.T01:intron 20.0%
!! CTTTAATTGAACATATTGAA+TGG - Chr6:94085108-94085127 None:intergenic 20.0%
!! GTTAATGATAAGAAAATCAA+AGG + Chr6:94083688-94083707 MsG0680034759.01.T01:intron 20.0%
!! TCAAGAGTTTAGTTAAAATA+TGG - Chr6:94087332-94087351 None:intergenic 20.0%
!! TCAATTCTTAAATCATGTAA+CGG - Chr6:94083792-94083811 None:intergenic 20.0%
!!! AAATAACTTGTCAAAACATT+AGG - Chr6:94086559-94086578 None:intergenic 20.0%
!!! ACTTATAAATCTATGCATTT+TGG + Chr6:94085372-94085391 MsG0680034759.01.T01:intron 20.0%
!!! ATTTTTAAATCGTGGTTATT+CGG + Chr6:94083346-94083365 MsG0680034759.01.T01:intron 20.0%
!!! CTCTTGAAATACTTTATTTT+TGG + Chr6:94087345-94087364 MsG0680034759.01.T01:three_prime_UTR 20.0%
!!! GTTTTAAGTTATAGTTATGT+TGG + Chr6:94083370-94083389 MsG0680034759.01.T01:intron 20.0%
!!! TGTTTTTTACAAAGTAAACA+TGG + Chr6:94086533-94086552 MsG0680034759.01.T01:intron 20.0%
!!! TTTGAGATATTTTCTTTTTG+GGG + Chr6:94084194-94084213 MsG0680034759.01.T01:intron 20.0%
!!! TTTTCTTATCATTAACATCA+AGG - Chr6:94083684-94083703 None:intergenic 20.0%
!!! TTTTGAAGTGAATTATTTGA+TGG + Chr6:94086338-94086357 MsG0680034759.01.T01:intron 20.0%
! AAATAAAGAAAGACACAAAG+CGG - Chr6:94083967-94083986 None:intergenic 25.0%
! AAGCAAAATGTAAGAAATAG+AGG - Chr6:94085508-94085527 None:intergenic 25.0%
! AATATGAAATTCTTGCTTAG+GGG + Chr6:94086365-94086384 MsG0680034759.01.T01:intron 25.0%
! ACTTGACAAAATCATTCTTA+AGG - Chr6:94084811-94084830 None:intergenic 25.0%
! AGAATATGAAATTCTTGCTT+AGG + Chr6:94086363-94086382 MsG0680034759.01.T01:intron 25.0%
! AGCAAAAGAATAAATAACAG+AGG - Chr6:94084895-94084914 None:intergenic 25.0%
! ATAGTAGTAATACAGACAAT+AGG - Chr6:94086982-94087001 None:intergenic 25.0%
! ATTAGTAATCTTTACTGTGT+TGG + Chr6:94086595-94086614 MsG0680034759.01.T01:intron 25.0%
! CAAATCATGATGTTAAAACA+TGG + Chr6:94083845-94083864 MsG0680034759.01.T01:intron 25.0%
! CGTAGCTAAATAAAAAAACA+TGG + Chr6:94084013-94084032 MsG0680034759.01.T01:intron 25.0%
! GAATATGAAATTCTTGCTTA+GGG + Chr6:94086364-94086383 MsG0680034759.01.T01:intron 25.0%
! TACTAGTAATACCTAACTAA+GGG - Chr6:94086021-94086040 None:intergenic 25.0%
! TCTTATTGTCTTCATTTCAT+AGG + Chr6:94087171-94087190 MsG0680034759.01.T01:three_prime_UTR 25.0%
! TTCATAATGAATCACATATG+AGG + Chr6:94086826-94086845 MsG0680034759.01.T01:intron 25.0%
!! AGTTTTTCTATACTGTGAAA+TGG + Chr6:94084630-94084649 MsG0680034759.01.T01:CDS 25.0%
!! ATTATGATGATTTGCCTATT+TGG + Chr6:94084432-94084451 MsG0680034759.01.T01:CDS 25.0%
!! GACAAGTTATTTCAAACTTA+AGG + Chr6:94086567-94086586 MsG0680034759.01.T01:intron 25.0%
!! GATGACTCAATATTTAACTT+TGG + Chr6:94084143-94084162 MsG0680034759.01.T01:intron 25.0%
!! TCAATATTTAACTTTGGAAG+AGG + Chr6:94084149-94084168 MsG0680034759.01.T01:intron 25.0%
!! TGGTTAGTATCATTTTATTG+CGG + Chr6:94083390-94083409 MsG0680034759.01.T01:intron 25.0%
!! TGTTTTCTATATCTGGATTT+TGG + Chr6:94086701-94086720 MsG0680034759.01.T01:intron 25.0%
!! TTATGATGATTTGCCTATTT+GGG + Chr6:94084433-94084452 MsG0680034759.01.T01:CDS 25.0%
!! TTTCTTTATTTGAGAATGAG+TGG + Chr6:94083976-94083995 MsG0680034759.01.T01:intron 25.0%
!! TTTTTAAATCGTGGTTATTC+GGG + Chr6:94083347-94083366 MsG0680034759.01.T01:intron 25.0%
!!! AGGGTTTTGATTTTAAATCA+TGG + Chr6:94083496-94083515 MsG0680034759.01.T01:intron 25.0%
!!! ATGTTGCTATTGTTTTGTTA+GGG + Chr6:94083521-94083540 MsG0680034759.01.T01:intron 25.0%
!!! ATGTTTTAAAATATCGGATC+CGG + Chr6:94083733-94083752 MsG0680034759.01.T01:intron 25.0%
!!! GATCACAAAAGAAACTTTTT+TGG + Chr6:94087289-94087308 MsG0680034759.01.T01:three_prime_UTR 25.0%
!!! GGGTTTTGATTTTAAATCAT+GGG + Chr6:94083497-94083516 MsG0680034759.01.T01:intron 25.0%
!!! TATGTTGCTATTGTTTTGTT+AGG + Chr6:94083520-94083539 MsG0680034759.01.T01:intron 25.0%
AAGGAAAAATTTGGATTCTC+GGG + Chr6:94086731-94086750 MsG0680034759.01.T01:intron 30.0%
AATAAAGAAAGACACAAAGC+GGG - Chr6:94083966-94083985 None:intergenic 30.0%
ACTAGTAATACCTAACTAAG+GGG - Chr6:94086020-94086039 None:intergenic 30.0%
ACTGATAAGAAAATCAGTTG+TGG - Chr6:94084117-94084136 None:intergenic 30.0%
AGGTAGTATCTATAATCACT+AGG - Chr6:94084494-94084513 None:intergenic 30.0%
ATATTCATATTGGCACTTGT+TGG + Chr6:94085219-94085238 MsG0680034759.01.T01:CDS 30.0%
ATTATATATTTGCCAGTGTC+TGG + Chr6:94085797-94085816 MsG0680034759.01.T01:CDS 30.0%
CAAGGAAAAATTTGGATTCT+CGG + Chr6:94086730-94086749 MsG0680034759.01.T01:intron 30.0%
CATGTATCCAAAGAAAAATG+AGG - Chr6:94087036-94087055 None:intergenic 30.0%
CCAGATATAGAAAACATAGA+TGG - Chr6:94086697-94086716 None:intergenic 30.0%
GAAAATCAGTTGTGGTAATT+TGG - Chr6:94084109-94084128 None:intergenic 30.0%
GCAAATACAGATTTGAACTT+GGG - Chr6:94085034-94085053 None:intergenic 30.0%
GGTAGTATCTATAATCACTA+GGG - Chr6:94084493-94084512 None:intergenic 30.0%
GGTTATATCATCAAAGAGAT+GGG - Chr6:94086074-94086093 None:intergenic 30.0%
GTACTAGTAATACCTAACTA+AGG - Chr6:94086022-94086041 None:intergenic 30.0%
TACGGTGTTCATATTCATAT+TGG + Chr6:94085209-94085228 MsG0680034759.01.T01:CDS 30.0%
TGCAAATACAGATTTGAACT+TGG - Chr6:94085035-94085054 None:intergenic 30.0%
TGCTTCAATTCTCTTATTAG+TGG + Chr6:94083301-94083320 MsG0680034759.01.T01:intron 30.0%
TGGTAATTTGGCAAGTAAAT+TGG - Chr6:94084097-94084116 None:intergenic 30.0%
TGGTTATATCATCAAAGAGA+TGG - Chr6:94086075-94086094 None:intergenic 30.0%
TGTACTATATAAGAGAAGCT+GGG + Chr6:94087231-94087250 MsG0680034759.01.T01:three_prime_UTR 30.0%
TGTAGATTGTGTAAATTCTG+TGG - Chr6:94085825-94085844 None:intergenic 30.0%
TTAGCTAACTAAATGGTATC+CGG - Chr6:94083755-94083774 None:intergenic 30.0%
TTATATATTTGCCAGTGTCT+GGG + Chr6:94085798-94085817 MsG0680034759.01.T01:CDS 30.0%
TTTCTATACTGTGAAATGGA+AGG + Chr6:94084634-94084653 MsG0680034759.01.T01:CDS 30.0%
! AATTGATAATCGAAAACCAG+TGG - Chr6:94084733-94084752 None:intergenic 30.0%
! CCATCTATGTTTTCTATATC+TGG + Chr6:94086694-94086713 MsG0680034759.01.T01:intron 30.0%
! GGTTAGTATCATTTTATTGC+GGG + Chr6:94083391-94083410 MsG0680034759.01.T01:intron 30.0%
! TATGATGATTTGCCTATTTG+GGG + Chr6:94084434-94084453 MsG0680034759.01.T01:CDS 30.0%
! TTTATGCATTTTGTGCAGTA+CGG + Chr6:94085191-94085210 MsG0680034759.01.T01:intron 30.0%
! TTTTAAATCGTGGTTATTCG+GGG + Chr6:94083348-94083367 MsG0680034759.01.T01:intron 30.0%
!! ATGCAAACCTCATTTTTCTT+TGG + Chr6:94087026-94087045 MsG0680034759.01.T01:CDS 30.0%
!! CAATTAAACTCAAAGCATTG+TGG - Chr6:94086869-94086888 None:intergenic 30.0%
!! CTCATTTTTCTTTGGATACA+TGG + Chr6:94087034-94087053 MsG0680034759.01.T01:CDS 30.0%
!! TGTTTTGTTAGGGAAAATTG+CGG + Chr6:94083531-94083550 MsG0680034759.01.T01:intron 30.0%
AACCAACCTGGTATACAAAA+TGG - Chr6:94083277-94083296 None:intergenic 35.0%
ACCTGTTTAGAAGTCAAACA+AGG - Chr6:94084934-94084953 None:intergenic 35.0%
ATAAAGAAAGACACAAAGCG+GGG - Chr6:94083965-94083984 None:intergenic 35.0%
CAAAATGGATGTGCTTGTAA+AGG - Chr6:94084514-94084533 None:intergenic 35.0%
CATGCAAATCTAACTGATAC+TGG - Chr6:94085399-94085418 None:intergenic 35.0%
CCACAAAGTAATCACTAAAC+AGG - Chr6:94086249-94086268 None:intergenic 35.0%
CCTGTTTAGTGATTACTTTG+TGG + Chr6:94086246-94086265 MsG0680034759.01.T01:intron 35.0%
CGTATTCCAACTTCACATAA+TGG + Chr6:94083818-94083837 MsG0680034759.01.T01:intron 35.0%
CTTTCTTGCACCAATTTCTA+TGG + Chr6:94085979-94085998 MsG0680034759.01.T01:intron 35.0%
GAAATCAGTTCACTGCTAAA+TGG - Chr6:94086044-94086063 None:intergenic 35.0%
GACACTTACAAAAGAAGAAG+TGG + Chr6:94084364-94084383 MsG0680034759.01.T01:CDS 35.0%
GCAGGATTTAGCTAACTAAA+TGG - Chr6:94083762-94083781 None:intergenic 35.0%
GGGAAAATTGCGGTTAAATA+TGG + Chr6:94083541-94083560 MsG0680034759.01.T01:intron 35.0%
GTGTACTATATAAGAGAAGC+TGG + Chr6:94087230-94087249 MsG0680034759.01.T01:three_prime_UTR 35.0%
GTTATATATGCACTCACTTC+AGG + Chr6:94085288-94085307 MsG0680034759.01.T01:CDS 35.0%
TACGTCATTCTATTGTCAAC+TGG + Chr6:94085329-94085348 MsG0680034759.01.T01:CDS 35.0%
TATATAAGAGAAGCTGGGTT+GGG + Chr6:94087236-94087255 MsG0680034759.01.T01:three_prime_UTR 35.0%
TATATATTTGCCAGTGTCTG+GGG + Chr6:94085799-94085818 MsG0680034759.01.T01:CDS 35.0%
TATTGAGATCAATGTGCGAA+CGG + Chr6:94084559-94084578 MsG0680034759.01.T01:CDS 35.0%
TCATTCTATTGTCAACTGGA+AGG + Chr6:94085333-94085352 MsG0680034759.01.T01:CDS 35.0%
TCGTCGTTATAGTTCTCATA+TGG + Chr6:94085584-94085603 MsG0680034759.01.T01:CDS 35.0%
TGAAGTCCATTATGTGAAGT+TGG - Chr6:94083827-94083846 None:intergenic 35.0%
TGATCTTGAACATCACATCA+AGG - Chr6:94083634-94083653 None:intergenic 35.0%
TGTTACTGCTTTCATTACTG+TGG + Chr6:94085879-94085898 MsG0680034759.01.T01:CDS 35.0%
TGTTTATAGTCCCCTTAGTT+AGG + Chr6:94086007-94086026 MsG0680034759.01.T01:intron 35.0%
TTAGCTACGTATTAGCATAG+TGG - Chr6:94084002-94084021 None:intergenic 35.0%
TTGAAGCAAAAAAACCAACC+TGG - Chr6:94083289-94083308 None:intergenic 35.0%
! AAGAAGAAGTGGCGAATTTT+CGG + Chr6:94084375-94084394 MsG0680034759.01.T01:CDS 35.0%
! CATTTTATTGCGGGAAATTG+CGG + Chr6:94083400-94083419 MsG0680034759.01.T01:intron 35.0%
! CGAGAATCCAAATTTTTCCT+TGG - Chr6:94086732-94086751 None:intergenic 35.0%
! GATATTTTATGTGGAATCCC+GGG + Chr6:94083913-94083932 MsG0680034759.01.T01:intron 35.0%
! GGATATTTTATGTGGAATCC+CGG + Chr6:94083912-94083931 MsG0680034759.01.T01:intron 35.0%
! GTAAGGAAATAAGAGCACAA+AGG - Chr6:94086916-94086935 None:intergenic 35.0%
! TATTTTATCCGTACAACCGA+GGG + Chr6:94085244-94085263 MsG0680034759.01.T01:CDS 35.0%
! TCATCAGAACTCATTTTCAG+TGG - Chr6:94086179-94086198 None:intergenic 35.0%
! TCCTTGTTTGACTTCTAAAC+AGG + Chr6:94084930-94084949 MsG0680034759.01.T01:intron 35.0%
! TCGATGTAAATAGCACTGAA+AGG - Chr6:94085772-94085791 None:intergenic 35.0%
! TGATTTTCAGTGAGACGTAT+CGG + Chr6:94083239-94083258 MsG0680034759.01.T01:CDS 35.0%
! TTTGGTTTCTTCTTGATGCT+TGG + Chr6:94087068-94087087 MsG0680034759.01.T01:CDS 35.0%
!! AAAGAGAAGAAAGAAGCACT+GGG + Chr6:94084254-94084273 MsG0680034759.01.T01:CDS 35.0%
!! GTGGAAAGTGTTAATGTTAG+AGG - Chr6:94086160-94086179 None:intergenic 35.0%
!! TTTCATAGGGAAGGTTGATA+AGG + Chr6:94084457-94084476 MsG0680034759.01.T01:CDS 35.0%
AAAAGACAAGGACTCTGTGT+CGG + Chr6:94084331-94084350 MsG0680034759.01.T01:CDS 40.0%
AAACAGGTATGCACATGATG+AGG + Chr6:94084946-94084965 MsG0680034759.01.T01:intron 40.0%
AAACTCACAGGGTAAACAGT+TGG - Chr6:94085078-94085097 None:intergenic 40.0%
AACTCACAGGGTAAACAGTT+GGG - Chr6:94085077-94085096 None:intergenic 40.0%
ACGACTCTAACTCATGAACA+AGG + Chr6:94086648-94086667 MsG0680034759.01.T01:intron 40.0%
ACGTCTCCTCTACTTGTATT+GGG + Chr6:94085616-94085635 MsG0680034759.01.T01:CDS 40.0%
AGCACAAAGGTTAAATGTGC+AGG - Chr6:94086903-94086922 None:intergenic 40.0%
ATGCATACAATTGTTCCTGC+AGG + Chr6:94086442-94086461 MsG0680034759.01.T01:intron 40.0%
CCAACATCGATCAACTACAT+TGG - Chr6:94086095-94086114 None:intergenic 40.0%
CCAATGTAGTTGATCGATGT+TGG + Chr6:94086092-94086111 MsG0680034759.01.T01:intron 40.0%
CCCTTGGATATTTAGTTGTG+CGG - Chr6:94085687-94085706 None:intergenic 40.0%
CCGCACAACTAAATATCCAA+GGG + Chr6:94085684-94085703 MsG0680034759.01.T01:CDS 40.0%
CCTTACAGATCATTCCTATG+CGG + Chr6:94086930-94086949 MsG0680034759.01.T01:intron 40.0%
CGACTCTAACTCATGAACAA+GGG + Chr6:94086649-94086668 MsG0680034759.01.T01:intron 40.0%
CTAGACCATCCAATCTTGAT+CGG - Chr6:94084044-94084063 None:intergenic 40.0%
CTATATAAGAGAAGCTGGGT+TGG + Chr6:94087235-94087254 MsG0680034759.01.T01:three_prime_UTR 40.0%
CTTTGTCCGTTTATCATGAC+AGG + Chr6:94085444-94085463 MsG0680034759.01.T01:intron 40.0%
GAAACCTAAAAACATCACCG+TGG - Chr6:94085012-94085031 None:intergenic 40.0%
GAAGAAACCAAAGCATATGC+AGG - Chr6:94087060-94087079 None:intergenic 40.0%
GGGAAACATTCTTGCTTTCA+TGG + Chr6:94086669-94086688 MsG0680034759.01.T01:intron 40.0%
GGGAAATTGCGGTTAAATAC+AGG + Chr6:94083411-94083430 MsG0680034759.01.T01:intron 40.0%
GGTGCAACCAAGGAAAAATT+TGG + Chr6:94086722-94086741 MsG0680034759.01.T01:intron 40.0%
GGTTCATTTGAACGCAATTC+TGG + Chr6:94087367-94087386 MsG0680034759.01.T01:three_prime_UTR 40.0%
GTTCGGAATCTACTATTGAC+CGG + Chr6:94085466-94085485 MsG0680034759.01.T01:CDS 40.0%
TAAAGAAAGACACAAAGCGG+GGG - Chr6:94083964-94083983 None:intergenic 40.0%
TACGTCTCCTCTACTTGTAT+TGG + Chr6:94085615-94085634 MsG0680034759.01.T01:CDS 40.0%
TCAACTGGAAGGAACAAACT+GGG + Chr6:94085344-94085363 MsG0680034759.01.T01:CDS 40.0%
TCATGTAACGGTGTAAATGC+AGG - Chr6:94083780-94083799 None:intergenic 40.0%
TCCGAACCTGTCATGATAAA+CGG - Chr6:94085453-94085472 None:intergenic 40.0%
TCCGCACAACTAAATATCCA+AGG + Chr6:94085683-94085702 MsG0680034759.01.T01:CDS 40.0%
TCCGTTTATCATGACAGGTT+CGG + Chr6:94085449-94085468 MsG0680034759.01.T01:intron 40.0%
TGAAACCAGACATATCAGAG+CGG - Chr6:94087007-94087026 None:intergenic 40.0%
TGCTGATGCAATTGTAGTTG+TGG + Chr6:94083568-94083587 MsG0680034759.01.T01:intron 40.0%
TGTGATCTAACAAGTTGCTC+TGG - Chr6:94087276-94087295 None:intergenic 40.0%
TTCCCTATGAAACCCCAAAT+AGG - Chr6:94084449-94084468 None:intergenic 40.0%
TTCTTGATGCTTGGAACTGT+TGG + Chr6:94087077-94087096 MsG0680034759.01.T01:CDS 40.0%
TTGCAAGAAAACCAGTCAAG+AGG - Chr6:94084772-94084791 None:intergenic 40.0%
TTGCTGCTGAAGATCATGAA+TGG + Chr6:94085920-94085939 MsG0680034759.01.T01:CDS 40.0%
TTGTAGTTGTGGAGACATCA+TGG + Chr6:94083579-94083598 MsG0680034759.01.T01:intron 40.0%
TTTACCCTGTGAGTTTCTTC+TGG + Chr6:94085082-94085101 MsG0680034759.01.T01:intron 40.0%
! ACACAGAGTCCTTGTCTTTT+TGG - Chr6:94084331-94084350 None:intergenic 40.0%
! ACATCCACGGTGATGTTTTT+AGG + Chr6:94085005-94085024 MsG0680034759.01.T01:CDS 40.0%
! ACCAGTGGATTTCCAAATGA+TGG - Chr6:94084718-94084737 None:intergenic 40.0%
! ACTTGATGGATCGGTATATG+TGG - Chr6:94087130-94087149 None:intergenic 40.0%
! ATTTTATCCGTACAACCGAG+GGG + Chr6:94085245-94085264 MsG0680034759.01.T01:CDS 40.0%
! CAGTGGATTTCCAAATGATG+GGG - Chr6:94084716-94084735 None:intergenic 40.0%
! CCAGTGGATTTCCAAATGAT+GGG - Chr6:94084717-94084736 None:intergenic 40.0%
! GAAAGAGAAGAAAGAAGCAC+TGG + Chr6:94084253-94084272 MsG0680034759.01.T01:CDS 40.0%
! GGCTGTGAGGATATTTTATG+TGG + Chr6:94083904-94083923 MsG0680034759.01.T01:intron 40.0%
! GTATTTTATCCGTACAACCG+AGG + Chr6:94085243-94085262 MsG0680034759.01.T01:CDS 40.0%
! TATTTGGGGTTTCATAGGGA+AGG + Chr6:94084448-94084467 MsG0680034759.01.T01:CDS 40.0%
! TGCCTATTTGGGGTTTCATA+GGG + Chr6:94084444-94084463 MsG0680034759.01.T01:CDS 40.0%
! TTGCCTATTTGGGGTTTCAT+AGG + Chr6:94084443-94084462 MsG0680034759.01.T01:CDS 40.0%
! TTTGGCAAGTAAATTGGCTC+CGG - Chr6:94084091-94084110 None:intergenic 40.0%
!! ATAGGGAAGGTTGATAAGGA+GGG + Chr6:94084461-94084480 MsG0680034759.01.T01:CDS 40.0%
!!! GATCTGCCATTTTGTATACC+AGG + Chr6:94083268-94083287 MsG0680034759.01.T01:CDS 40.0%
!!! TGCCATTTTGTATACCAGGT+TGG + Chr6:94083272-94083291 MsG0680034759.01.T01:intron 40.0%
!!! TTTTGGAACTCGAGCTGATA+AGG - Chr6:94084314-94084333 None:intergenic 40.0%
AAAGAAAGACACAAAGCGGG+GGG - Chr6:94083963-94083982 None:intergenic 45.0%
AAATGCCTACTCGCACTTGA+TGG - Chr6:94087144-94087163 None:intergenic 45.0%
AATGGCCAGAAGAAACTCAC+AGG - Chr6:94085090-94085109 None:intergenic 45.0%
ACCATCCAATCTTGATCGGA+TGG - Chr6:94084040-94084059 None:intergenic 45.0%
ACCATCCGATCAAGATTGGA+TGG + Chr6:94084036-94084055 MsG0680034759.01.T01:intron 45.0%
ACTGGCTGGAAATACATCCA+CGG + Chr6:94084992-94085011 MsG0680034759.01.T01:CDS 45.0%
ACTGTTGCATCCTAGTGGTT+TGG + Chr6:94083883-94083902 MsG0680034759.01.T01:intron 45.0%
AGCAATTCCTCAGATGGCAA+TGG + Chr6:94085735-94085754 MsG0680034759.01.T01:CDS 45.0%
ATAACGACGATTGTGCCGAA+TGG - Chr6:94085574-94085593 None:intergenic 45.0%
ATCCCTCCCAATACAAGTAG+AGG - Chr6:94085625-94085644 None:intergenic 45.0%
ATGGACCATCCGATCAAGAT+TGG + Chr6:94084032-94084051 MsG0680034759.01.T01:intron 45.0%
ATGGCCAGAAGAAACTCACA+GGG - Chr6:94085089-94085108 None:intergenic 45.0%
CAAGAAAACCAGTCAAGAGG+AGG - Chr6:94084769-94084788 None:intergenic 45.0%
CCCATCATTTGGAAATCCAC+TGG + Chr6:94084714-94084733 MsG0680034759.01.T01:CDS 45.0%
CCGCATAGGAATGATCTGTA+AGG - Chr6:94086933-94086952 None:intergenic 45.0%
CTCCTCTACTTGTATTGGGA+GGG + Chr6:94085620-94085639 MsG0680034759.01.T01:CDS 45.0%
CTGAAGATCATGAATGGTGG+TGG + Chr6:94085926-94085945 MsG0680034759.01.T01:CDS 45.0%
CTGCTGAAGATCATGAATGG+TGG + Chr6:94085923-94085942 MsG0680034759.01.T01:CDS 45.0%
GAAACCAGACATATCAGAGC+GGG - Chr6:94087006-94087025 None:intergenic 45.0%
GAAATAGAGGCCCACAGAAA+AGG - Chr6:94085495-94085514 None:intergenic 45.0%
GCTCGAGTTCCAAAAAGACA+AGG + Chr6:94084319-94084338 MsG0680034759.01.T01:CDS 45.0%
GCTTAGGGGTGATGCATTTA+TGG + Chr6:94086379-94086398 MsG0680034759.01.T01:intron 45.0%
GGACAAAGAACAATGCTGCA+CGG - Chr6:94087106-94087125 None:intergenic 45.0%
GGATATTTAGTTGTGCGGAC+TGG - Chr6:94085682-94085701 None:intergenic 45.0%
GTAGTAGTCCTTACGAACAG+CGG - Chr6:94084402-94084421 None:intergenic 45.0%
GTCAACTGGAAGGAACAAAC+TGG + Chr6:94085343-94085362 MsG0680034759.01.T01:CDS 45.0%
GTCCTCTGTAACATCCACAA+GGG - Chr6:94084594-94084613 None:intergenic 45.0%
TAACGACGATTGTGCCGAAT+GGG - Chr6:94085573-94085592 None:intergenic 45.0%
TACAGATCATTCCTATGCGG+TGG + Chr6:94086933-94086952 MsG0680034759.01.T01:intron 45.0%
TACATGGCCTGCATATGCTT+TGG + Chr6:94087050-94087069 MsG0680034759.01.T01:CDS 45.0%
TCTCCTCTACTTGTATTGGG+AGG + Chr6:94085619-94085638 MsG0680034759.01.T01:CDS 45.0%
TCTGTATTTGCAGCAGCTCT+TGG + Chr6:94085043-94085062 MsG0680034759.01.T01:CDS 45.0%
TGTCCTCTGTAACATCCACA+AGG - Chr6:94084595-94084614 None:intergenic 45.0%
TTCCTCCTTTGCCATGGTAT+CGG + Chr6:94085710-94085729 MsG0680034759.01.T01:CDS 45.0%
TTGTATTGGGAGGGATTGCT+GGG + Chr6:94085629-94085648 MsG0680034759.01.T01:CDS 45.0%
! AGTGTTGAATGGGGATAGGT+TGG + Chr6:94084280-94084299 MsG0680034759.01.T01:CDS 45.0%
! TGATGGATCGGTATATGTGG+CGG - Chr6:94087127-94087146 None:intergenic 45.0%
!! AAGATCATGAATGGTGGTGG+AGG + Chr6:94085929-94085948 MsG0680034759.01.T01:CDS 45.0%
!! ACTGGGTGAAGTGTTGAATG+GGG + Chr6:94084271-94084290 MsG0680034759.01.T01:CDS 45.0%
!! CACTGGGTGAAGTGTTGAAT+GGG + Chr6:94084270-94084289 MsG0680034759.01.T01:CDS 45.0%
!! CATAGGGAAGGTTGATAAGG+AGG + Chr6:94084460-94084479 MsG0680034759.01.T01:CDS 45.0%
!! GTAACATCCACAAGGGCATT+TGG - Chr6:94084587-94084606 None:intergenic 45.0%
!! GTGAAGTGTTGAATGGGGAT+AGG + Chr6:94084276-94084295 MsG0680034759.01.T01:CDS 45.0%
!! TAGGGAAGGTTGATAAGGAG+GGG + Chr6:94084462-94084481 MsG0680034759.01.T01:CDS 45.0%
!! TCTGGATTTTGGTGCAACCA+AGG + Chr6:94086712-94086731 MsG0680034759.01.T01:intron 45.0%
AACGGATCCAAATGCCCTTG+TGG + Chr6:94084577-94084596 MsG0680034759.01.T01:CDS 50.0%
AAGAAAGACACAAAGCGGGG+GGG - Chr6:94083962-94083981 None:intergenic 50.0%
AATAGACTCTCGAGTCCTGC+AGG - Chr6:94086460-94086479 None:intergenic 50.0%
AATAGAGCCCCTCGGTTGTA+CGG - Chr6:94085255-94085274 None:intergenic 50.0%
AATCCTGCCATTGCCATCTG+AGG - Chr6:94085745-94085764 None:intergenic 50.0%
ACATGATGAGGAGACTGCAG+AGG + Chr6:94084958-94084977 MsG0680034759.01.T01:CDS 50.0%
ACCACTAGGATGCAACAGTG+AGG - Chr6:94083882-94083901 None:intergenic 50.0%
ATCCAGTTGAACCACCGCAT+AGG - Chr6:94086947-94086966 None:intergenic 50.0%
ATCCTCACAGCCAAACCACT+AGG - Chr6:94083896-94083915 None:intergenic 50.0%
ATTCCTCAGATGGCAATGGC+AGG + Chr6:94085739-94085758 MsG0680034759.01.T01:CDS 50.0%
CAACAACGTGATTGCGTGAC+CGG + Chr6:94084069-94084088 MsG0680034759.01.T01:intron 50.0%
CATGATCTTCAGCAGCAAGC+TGG - Chr6:94085918-94085937 None:intergenic 50.0%
CTAACACTCCCTTCGAGAAG+CGG + Chr6:94084660-94084679 MsG0680034759.01.T01:CDS 50.0%
CTTGTATTGGGAGGGATTGC+TGG + Chr6:94085628-94085647 MsG0680034759.01.T01:CDS 50.0%
GATTGCTGGGAAGAACAGCA+AGG + Chr6:94085642-94085661 MsG0680034759.01.T01:CDS 50.0%
GCACTCACTTCAGGAATTGC+TGG + Chr6:94085297-94085316 MsG0680034759.01.T01:CDS 50.0%
TATGCCCGCTCTGATATGTC+TGG + Chr6:94086999-94087018 MsG0680034759.01.T01:CDS 50.0%
TCCTCACTGTTGCATCCTAG+TGG + Chr6:94083878-94083897 MsG0680034759.01.T01:intron 50.0%
TCCTCCTTTGCCATGGTATC+GGG + Chr6:94085711-94085730 MsG0680034759.01.T01:CDS 50.0%
TGCCCTTGTGGATGTTACAG+AGG + Chr6:94084589-94084608 MsG0680034759.01.T01:CDS 50.0%
TTCCTATGCGGTGGTTCAAC+TGG + Chr6:94086942-94086961 MsG0680034759.01.T01:CDS 50.0%
TTGTCCATCCGCTTCTCGAA+GGG - Chr6:94084671-94084690 None:intergenic 50.0%
TTTGCAGCAGCTCTTGGATC+TGG + Chr6:94085049-94085068 MsG0680034759.01.T01:CDS 50.0%
! AAATGATGGGGTAGCGAGGA+CGG - Chr6:94084704-94084723 None:intergenic 50.0%
! ATAAGAGAAGCTGGGTTGGG+TGG + Chr6:94087239-94087258 MsG0680034759.01.T01:three_prime_UTR 50.0%
! ATCCTAGTGGTTTGGCTGTG+AGG + Chr6:94083891-94083910 MsG0680034759.01.T01:intron 50.0%
! CCTACTCGCACTTGATGGAT+CGG - Chr6:94087139-94087158 None:intergenic 50.0%
! TAAGAGAAGCTGGGTTGGGT+GGG + Chr6:94087240-94087259 MsG0680034759.01.T01:three_prime_UTR 50.0%
! TGACCGGATGCCTTTTCTGT+GGG + Chr6:94085482-94085501 MsG0680034759.01.T01:CDS 50.0%
! TTCCAAATGATGGGGTAGCG+AGG - Chr6:94084708-94084727 None:intergenic 50.0%
! TTGACCGGATGCCTTTTCTG+TGG + Chr6:94085481-94085500 MsG0680034759.01.T01:CDS 50.0%
! TTTTCGGTCCGCTGTTCGTA+AGG + Chr6:94084391-94084410 MsG0680034759.01.T01:CDS 50.0%
!! GCACTGGGTGAAGTGTTGAA+TGG + Chr6:94084269-94084288 MsG0680034759.01.T01:CDS 50.0%
AATTCTGTGGCCCCAGACAC+TGG - Chr6:94085812-94085831 None:intergenic 55.0%
AGGATCAGGAAGAGACTGGC+TGG + Chr6:94084978-94084997 MsG0680034759.01.T01:CDS 55.0%
CCGATCCATCAAGTGCGAGT+AGG + Chr6:94087136-94087155 MsG0680034759.01.T01:CDS 55.0%
CCTCCTTTGCCATGGTATCG+GGG + Chr6:94085712-94085731 MsG0680034759.01.T01:CDS 55.0%
CTTGTCCATCCGCTTCTCGA+AGG - Chr6:94084672-94084691 None:intergenic 55.0%
GATTGTGCCGAATGGGAGAG+CGG - Chr6:94085566-94085585 None:intergenic 55.0%
GCAGAGGATCAGGAAGAGAC+TGG + Chr6:94084974-94084993 MsG0680034759.01.T01:CDS 55.0%
GGAATTGCTCCCCGATACCA+TGG - Chr6:94085724-94085743 None:intergenic 55.0%
GGCAAAGGAGGAATCTCCCT+TGG - Chr6:94085703-94085722 None:intergenic 55.0%
GGGAGATTCCTCCTTTGCCA+TGG + Chr6:94085704-94085723 MsG0680034759.01.T01:CDS 55.0%
GTCACAGTCCTCCTCTTGAC+TGG + Chr6:94084758-94084777 MsG0680034759.01.T01:CDS 55.0%
GTCCTCGCTACCCCATCATT+TGG + Chr6:94084703-94084722 MsG0680034759.01.T01:CDS 55.0%
GTGCAGTGAATAGAGCCCCT+CGG - Chr6:94085263-94085282 None:intergenic 55.0%
TCGGGGAGCAATTCCTCAGA+TGG + Chr6:94085729-94085748 MsG0680034759.01.T01:CDS 55.0%
TGAGGAGACTGCAGAGGATC+AGG + Chr6:94084964-94084983 MsG0680034759.01.T01:CDS 55.0%
TGGTGACTCAGGTTCGAACC+CGG - Chr6:94083934-94083953 None:intergenic 55.0%
!! AGGCCCACAGAAAAGGCATC+CGG - Chr6:94085488-94085507 None:intergenic 55.0%
!! TAGTTGTGCGGACTGGAGCT+TGG - Chr6:94085675-94085694 None:intergenic 55.0%
CACAAAGCGGGGGGGAAATG+TGG - Chr6:94083954-94083973 None:intergenic 60.0%
CACTCCCTTCGAGAAGCGGA+TGG + Chr6:94084664-94084683 MsG0680034759.01.T01:CDS 60.0%
CCCCGATACCATGGCAAAGG+AGG - Chr6:94085715-94085734 None:intergenic 60.0%
GCTACTGCCGCTCTCCCATT+CGG + Chr6:94085556-94085575 MsG0680034759.01.T01:CDS 60.0%
GCTCCCCGATACCATGGCAA+AGG - Chr6:94085718-94085737 None:intergenic 60.0%
GGGGGGAAATGTGGTGACTC+AGG - Chr6:94083945-94083964 None:intergenic 60.0%
GGTGACTCAGGTTCGAACCC+GGG - Chr6:94083933-94083952 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 94083238 94087390 94083238 ID=MsG0680034759.01;Name=MsG0680034759.01
Chr6 mRNA 94083238 94087390 94083238 ID=MsG0680034759.01.T01;Parent=MsG0680034759.01;Name=MsG0680034759.01.T01;_AED=0.31;_eAED=0.31;_QI=0|1|0.83|1|0.8|0.83|6|233|544
Chr6 exon 94083238 94083289 94083238 ID=MsG0680034759.01.T01:exon:13086;Parent=MsG0680034759.01.T01
Chr6 exon 94084246 94084828 94084246 ID=MsG0680034759.01.T01:exon:13087;Parent=MsG0680034759.01.T01
Chr6 exon 94084952 94085089 94084952 ID=MsG0680034759.01.T01:exon:13088;Parent=MsG0680034759.01.T01
Chr6 exon 94085209 94085365 94085209 ID=MsG0680034759.01.T01:exon:13089;Parent=MsG0680034759.01.T01
Chr6 exon 94085466 94085950 94085466 ID=MsG0680034759.01.T01:exon:13090;Parent=MsG0680034759.01.T01
Chr6 exon 94086938 94087390 94086938 ID=MsG0680034759.01.T01:exon:13091;Parent=MsG0680034759.01.T01
Chr6 CDS 94083238 94083289 94083238 ID=MsG0680034759.01.T01:cds;Parent=MsG0680034759.01.T01
Chr6 CDS 94084246 94084828 94084246 ID=MsG0680034759.01.T01:cds;Parent=MsG0680034759.01.T01
Chr6 CDS 94084952 94085089 94084952 ID=MsG0680034759.01.T01:cds;Parent=MsG0680034759.01.T01
Chr6 CDS 94085209 94085365 94085209 ID=MsG0680034759.01.T01:cds;Parent=MsG0680034759.01.T01
Chr6 CDS 94085466 94085950 94085466 ID=MsG0680034759.01.T01:cds;Parent=MsG0680034759.01.T01
Chr6 CDS 94086938 94087157 94086938 ID=MsG0680034759.01.T01:cds;Parent=MsG0680034759.01.T01
Chr6 three_prime_UTR 94087158 94087390 94087158 ID=MsG0680034759.01.T01:three_prime_utr;Parent=MsG0680034759.01.T01
Gene Sequence

>MsG0680034759.01.T01

TTGATTTTCAGTGAGACGTATCGGTATTTTGATCTGCCATTTTGTATACCAGATCATTTGAAAGAGAAGAAAGAAGCACTGGGTGAAGTGTTGAATGGGGATAGGTTGGTTAGTGCTCCTTATCAGCTCGAGTTCCAAAAAGACAAGGACTCTGTGTCGGTTTGCAAGAAGACACTTACAAAAGAAGAAGTGGCGAATTTTCGGTCCGCTGTTCGTAAGGACTACTACTTTCAGATGTATTATGATGATTTGCCTATTTGGGGTTTCATAGGGAAGGTTGATAAGGAGGGGAAAGACCCTAGTGATTATAGATACTACCTTTACAAGCACATCCATTTTGATATATTTTATAACAAGGATCGTGTTATTGAGATCAATGTGCGAACGGATCCAAATGCCCTTGTGGATGTTACAGAGGACAATGAAGTTGATGTAGAGTTTTTCTATACTGTGAAATGGAAGGAGACTAACACTCCCTTCGAGAAGCGGATGGACAAGTACTCTCAGCCGTCCTCGCTACCCCATCATTTGGAAATCCACTGGTTTTCGATTATCAATTCGTGCGTCACAGTCCTCCTCTTGACTGGTTTTCTTGCAACTATTTTGATGCGTGTCCTTAAGAATGATTTTGTCAAGTATGCACATGATGAGGAGACTGCAGAGGATCAGGAAGAGACTGGCTGGAAATACATCCACGGTGATGTTTTTAGGTTTCCCAAGTTCAAATCTGTATTTGCAGCAGCTCTTGGATCTGGTACCCAACTGTTTACCCTTACGGTGTTCATATTCATATTGGCACTTGTTGGTGTATTTTATCCGTACAACCGAGGGGCTCTATTCACTGCACTTGTTGTTATATATGCACTCACTTCAGGAATTGCTGGCTATACTGCTACGTCATTCTATTGTCAACTGGAAGGAACAAACTGGGTTCGGAATCTACTATTGACCGGATGCCTTTTCTGTGGGCCTCTATTTCTTACATTTTGCTTTCTGAACACTGTTGCAATTGTCTACAATGCTACTGCCGCTCTCCCATTCGGCACAATCGTCGTTATAGTTCTCATATGGACACTTGTTACGTCTCCTCTACTTGTATTGGGAGGGATTGCTGGGAAGAACAGCAAGGCTGAATTCCAAGCTCCAGTCCGCACAACTAAATATCCAAGGGAGATTCCTCCTTTGCCATGGTATCGGGGAGCAATTCCTCAGATGGCAATGGCAGGATTTTTGCCTTTCAGTGCTATTTACATCGAACTTTATTATATATTTGCCAGTGTCTGGGGCCACAGAATTTACACAATCTACAGCATTCTGTTTATTGTCTTCATCATTCTCTTGATTGTTACTGCTTTCATTACTGTGGCATTGACATACTTCCAGCTTGCTGCTGAAGATCATGAATGGTGGTGGAGATCATTCCTATGCGGTGGTTCAACTGGATTATTTATCTATGCCTATTGTCTGTATTACTACTATGCCCGCTCTGATATGTCTGGTTTCATGCAAACCTCATTTTTCTTTGGATACATGGCCTGCATATGCTTTGGTTTCTTCTTGATGCTTGGAACTGTTGGATTCCGTGCAGCATTGTTCTTTGTCCGCCACATATACCGATCCATCAAGTGCGAGTAG

Protein sequence

>MsG0680034759.01.T01

LIFSETYRYFDLPFCIPDHLKEKKEALGEVLNGDRLVSAPYQLEFQKDKDSVSVCKKTLTKEEVANFRSAVRKDYYFQMYYDDLPIWGFIGKVDKEGKDPSDYRYYLYKHIHFDIFYNKDRVIEINVRTDPNALVDVTEDNEVDVEFFYTVKWKETNTPFEKRMDKYSQPSSLPHHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYAHDEETAEDQEETGWKYIHGDVFRFPKFKSVFAAALGSGTQLFTLTVFIFILALVGVFYPYNRGALFTALVVIYALTSGIAGYTATSFYCQLEGTNWVRNLLLTGCLFCGPLFLTFCFLNTVAIVYNATAALPFGTIVVIVLIWTLVTSPLLVLGGIAGKNSKAEFQAPVRTTKYPREIPPLPWYRGAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACICFGFFLMLGTVGFRAALFFVRHIYRSIKCE*