AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006027.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006027.01.T01 MTR_1g112230 98.325 418 7 0 1 418 1 418 0.0 853
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006027.01.T01 AT3G54250 80.668 419 80 1 1 418 1 419 0.0 697
MsG0180006027.01.T01 AT2G38700 76.372 419 91 2 1 418 1 412 0.0 654
MsG0180006027.01.T01 AT3G54250 84.039 307 49 0 1 307 1 307 0.0 530

Find 152 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTCCCATGTACCTTATT+TGG 0.031696 1:+99023270 None:intergenic
TTCCTCTTTGATTGATTTAT+TGG 0.066713 1:-99029386 MsG0180006027.01.T01:five_prime_UTR
GCTCTTCTCAACAGTGAAAA+TGG 0.180412 1:-99023298 MsG0180006027.01.T01:CDS
CTTCCCTCCAGTTACATTAT+TGG 0.191653 1:-99023496 MsG0180006027.01.T01:intron
GGAATATTGTCTTTAATTTC+TGG 0.195761 1:+99023406 None:intergenic
GAAGATTCCAGAGCTGTTTA+AGG 0.204279 1:-99028496 MsG0180006027.01.T01:CDS
AGTGCTTGTCGTAGCTTATT+TGG 0.220437 1:-99025970 MsG0180006027.01.T01:CDS
GTGTAGGAAATTTCTCTTTC+CGG 0.230107 1:-99028521 MsG0180006027.01.T01:intron
GGGATTTGTGAAGTGGAAAA+TGG 0.242630 1:-99025947 MsG0180006027.01.T01:CDS
TGATGTTGAGGATAATAAAA+AGG 0.260260 1:-99028453 MsG0180006027.01.T01:CDS
GTGCTTGTCGTAGCTTATTT+GGG 0.264802 1:-99025969 MsG0180006027.01.T01:CDS
ATCATTAACAGGTAAGATTA+GGG 0.303873 1:+99029273 None:intergenic
GCTCAGGCGAATTAAATTAA+AGG 0.305398 1:+99023006 None:intergenic
TATCATTCATGTAAAATATA+GGG 0.309352 1:+99024516 None:intergenic
GCCAAAGAGGATACTGAAAA+TGG 0.316786 1:-99024633 MsG0180006027.01.T01:CDS
TGGTTGATCTATTCTTCATT+AGG 0.316789 1:-99023241 MsG0180006027.01.T01:three_prime_UTR
CTGTTGAGGTCATCTGAATT+TGG 0.317231 1:+99023607 None:intergenic
TATCATTAACAGGTAAGATT+AGG 0.322166 1:+99029272 None:intergenic
GTATCATTCATGTAAAATAT+AGG 0.322715 1:+99024515 None:intergenic
CATTGCTGTGATCAAGTATT+GGG 0.327233 1:-99029311 MsG0180006027.01.T01:CDS
AACAGGTCCCCTTCCTGGTC+TGG 0.327487 1:+99023342 None:intergenic
TATATATATTAGTTAGTAAT+GGG 0.329149 1:+99029470 None:intergenic
AACAAAACAAGGAAAGAGTT+AGG 0.335219 1:-99029672 MsG0180006027.01.T01:five_prime_UTR
TTATTTATTCATTTCCCATT+TGG 0.336742 1:+99029625 None:intergenic
TGTAGGAAATTTCTCTTTCC+GGG 0.344687 1:-99028520 MsG0180006027.01.T01:intron
CCAGTTTCATGCAGTTTGTC+TGG 0.349580 1:-99024549 MsG0180006027.01.T01:CDS
GAAAATGGGCTTCCCAAATA+AGG 0.349886 1:-99023283 MsG0180006027.01.T01:exon
CGGTTCTAATTGCACGTAAT+AGG 0.354248 1:-99023675 MsG0180006027.01.T01:CDS
TTTGATTGATTTATTGGAAA+TGG 0.357406 1:-99029380 MsG0180006027.01.T01:exon
ATTTCCCATGTACCTTATTT+GGG 0.363262 1:+99023271 None:intergenic
CGTGCAATTAGAACCGCATT+TGG 0.371696 1:+99023682 None:intergenic
CTTCATTAGGCTTATCTGTC+CGG 0.383929 1:-99023228 MsG0180006027.01.T01:three_prime_UTR
CTTCCCCACTGCAGCTGGAT+TGG 0.391119 1:-99028369 MsG0180006027.01.T01:CDS
GAGATTAAATTGAATTCGTT+CGG 0.405752 1:+99029498 None:intergenic
CAATTTGCTCCAATCCTCCT+TGG 0.409304 1:+99028418 None:intergenic
CCAGACAAACTGCATGAAAC+TGG 0.411135 1:+99024549 None:intergenic
AACAACTTCCCCACTGCAGC+TGG 0.415060 1:-99028374 MsG0180006027.01.T01:CDS
TGGAAATGGCGGGTGATAGT+TGG 0.416905 1:-99029366 MsG0180006027.01.T01:exon
AAAGCAACTTCTGAATCAAA+AGG 0.417167 1:+99023641 None:intergenic
AATTATGTCATGGGTACAAC+AGG 0.421940 1:+99023159 None:intergenic
GAGAAGAGAATCCATCCAAA+TGG 0.429630 1:-99029640 MsG0180006027.01.T01:five_prime_UTR
CTTTCATCAGTAAGCACAAC+AGG 0.429825 1:+99023325 None:intergenic
TTTCTTAGATGACCCTTTCA+AGG 0.430043 1:-99023185 MsG0180006027.01.T01:three_prime_UTR
AGCACAACAGGTCCCCTTCC+TGG 0.433113 1:+99023337 None:intergenic
CTAGGTTAGCTCTCGGCAAA+AGG 0.434194 1:-99025123 MsG0180006027.01.T01:intron
CAAATTCAGATGACCTCAAC+AGG 0.435218 1:-99023606 MsG0180006027.01.T01:intron
GCAAAAGATGCTGGGATCAA+TGG 0.438234 1:-99023460 MsG0180006027.01.T01:CDS
ACACTGATACTATCATTAAC+AGG 0.448731 1:+99029262 None:intergenic
AAGTCAATTGCAAAAGATGC+TGG 0.449709 1:-99023469 MsG0180006027.01.T01:CDS
CTCTTCTCAACAGTGAAAAT+GGG 0.455253 1:-99023297 MsG0180006027.01.T01:CDS
AAGATTCCAGAGCTGTTTAA+GGG 0.458336 1:-99028495 MsG0180006027.01.T01:CDS
GCTGCGGGTTTCGCTTGTCT+TGG 0.462943 1:-99028338 MsG0180006027.01.T01:intron
GGATTTGTGAAGTGGAAAAT+GGG 0.468572 1:-99025946 MsG0180006027.01.T01:CDS
TTATATATATTAGTTAGTAA+TGG 0.470292 1:+99029469 None:intergenic
TGACATTCATTAGCTTCCCC+AGG 0.470709 1:+99026149 None:intergenic
GGAAATGGCGGGTGATAGTT+GGG 0.471328 1:-99029365 MsG0180006027.01.T01:exon
CAAGATCGTATGTGGCTCAA+TGG 0.475195 1:-99029178 MsG0180006027.01.T01:CDS
GGATCTCCCTTAAACAGCTC+TGG 0.477766 1:+99028489 None:intergenic
ACATTGCTGTGATCAAGTAT+TGG 0.482733 1:-99029312 MsG0180006027.01.T01:CDS
GTAGCTTATACGTTTGATGC+AGG 0.483477 1:-99023706 MsG0180006027.01.T01:CDS
AAGGAAACTAGCAGCACCTC+AGG 0.484840 1:-99025104 MsG0180006027.01.T01:CDS
ACCTTGCAATAGCAGACAGC+TGG 0.485298 1:+99026113 None:intergenic
CCTTTCAACAAGATCGTATG+TGG 0.485330 1:-99029186 MsG0180006027.01.T01:CDS
TTGTCTTTAATTTCTGGAGG+TGG 0.485942 1:+99023412 None:intergenic
TTATTCATTTCCCATTTGGA+TGG 0.486621 1:+99029629 None:intergenic
TGATATTTATAGGAGGAGAA+TGG 0.489664 1:-99025851 MsG0180006027.01.T01:intron
TTAAGATCACCAAGGAGGAT+TGG 0.489853 1:-99028427 MsG0180006027.01.T01:CDS
GGCTTCCCAAATAAGGTACA+TGG 0.490515 1:-99023276 MsG0180006027.01.T01:exon
AACTTGCTGATGAAAAGCAT+TGG 0.492166 1:-99025808 MsG0180006027.01.T01:CDS
AAACTGGTTGCTATCGGTAC+AGG 0.492574 1:+99024565 None:intergenic
TCTTTAATTTCTGGAGGTGG+TGG 0.493387 1:+99023415 None:intergenic
ACTATATACAGGCAAGGATC+AGG 0.494638 1:-99025994 MsG0180006027.01.T01:intron
AAAGGTGCTCAATTCAATAC+AGG 0.495352 1:+99023024 None:intergenic
TGCAAAATCACGGTTTCGAA+TGG 0.495401 1:+99024604 None:intergenic
AGAAGAGAATCCATCCAAAT+GGG 0.499644 1:-99029639 MsG0180006027.01.T01:five_prime_UTR
GTACAACAGGCTTCCTTGAA+AGG 0.505102 1:+99023172 None:intergenic
AAGCAGCAGTAGAACGAAGA+AGG 0.506291 1:-99029524 MsG0180006027.01.T01:five_prime_UTR
TGCTGGGATCAATGGAATAG+AGG 0.509843 1:-99023452 MsG0180006027.01.T01:CDS
TGGATTGGCTTCATCAGCTG+CGG 0.515526 1:-99028354 MsG0180006027.01.T01:CDS
AACACAAATAATTATGTCAT+GGG 0.518520 1:+99023150 None:intergenic
CCGTTCAGAAGAAGCTCCAC+AGG 0.520575 1:-99024345 MsG0180006027.01.T01:intron
TACTTTATATGCACCAGACC+AGG 0.522597 1:-99023355 MsG0180006027.01.T01:CDS
GAACACAAATAATTATGTCA+TGG 0.523799 1:+99023149 None:intergenic
ACTTGCTGATGAAAAGCATT+GGG 0.525139 1:-99025807 MsG0180006027.01.T01:CDS
TACAACAGGCTTCCTTGAAA+GGG 0.527193 1:+99023173 None:intergenic
TTGAGGTCATCTGAATTTGG+AGG 0.527987 1:+99023610 None:intergenic
AGCAGCAGTAGAACGAAGAA+GGG 0.529653 1:-99029523 MsG0180006027.01.T01:five_prime_UTR
TGCTTGTCGTAGCTTATTTG+GGG 0.531557 1:-99025968 MsG0180006027.01.T01:CDS
TGCAGTGGGGAAGTTGTTGT+AGG 0.531785 1:+99028379 None:intergenic
ACAAAACAAGGAAAGAGTTA+GGG 0.535738 1:-99029671 MsG0180006027.01.T01:five_prime_UTR
ACAGCTCTGGAATCTTCCCC+CGG 0.536812 1:+99028502 None:intergenic
GGATTGGCTTCATCAGCTGC+GGG 0.537741 1:-99028353 MsG0180006027.01.T01:CDS
TATTCCATCACAAAAGTACA+AGG 0.548644 1:-99023389 MsG0180006027.01.T01:CDS
AAGCAACTTCTGAATCAAAA+GGG 0.555123 1:+99023642 None:intergenic
AAGTTGAACTAGCAAAGCTC+AGG 0.555312 1:+99022990 None:intergenic
TTTATTTCTAGGTTAGCTCT+CGG 0.556502 1:-99025130 MsG0180006027.01.T01:intron
ATCATTCATGTAAAATATAG+GGG 0.557388 1:+99024517 None:intergenic
TGCATGAAACTGGTTGCTAT+CGG 0.559504 1:+99024559 None:intergenic
TAGCTTATACGTTTGATGCA+GGG 0.567321 1:-99023705 MsG0180006027.01.T01:CDS
TGAAGCCAATCCAGCTGCAG+TGG 0.570482 1:+99028364 None:intergenic
AATGAAGAATAGATCAACCA+TGG 0.572623 1:+99023244 None:intergenic
AAAGGAAGGACTAACAGAAA+CGG 0.573695 1:+99029204 None:intergenic
TATATGCACCAGACCAGGAA+GGG 0.575319 1:-99023350 MsG0180006027.01.T01:CDS
GACATTCATTAGCTTCCCCA+GGG 0.579343 1:+99026150 None:intergenic
AATAGGAAATAGTGCCAAAG+AGG 0.581666 1:-99024646 MsG0180006027.01.T01:intron
ATATTGTCTTTAATTTCTGG+AGG 0.581787 1:+99023409 None:intergenic
TTCCAATAAATCAATCAAAG+AGG 0.583411 1:+99029384 None:intergenic
GAAGCCAATCCAGCTGCAGT+GGG 0.584983 1:+99028365 None:intergenic
TTCCATCACAAAAGTACAAG+GGG 0.586717 1:-99023387 MsG0180006027.01.T01:CDS
TAATCAGCATTGTTGACAAG+TGG 0.588743 1:-99024370 MsG0180006027.01.T01:CDS
TGCTCAATTCAATACAGGAA+AGG 0.588746 1:+99023029 None:intergenic
AGTCAATTGCAAAAGATGCT+GGG 0.589588 1:-99023468 MsG0180006027.01.T01:CDS
CAACATCACACGCGCGAGCA+CGG 0.590089 1:+99028468 None:intergenic
TGCTCGCGCGTGTGATGTTG+AGG 0.590241 1:-99028465 MsG0180006027.01.T01:CDS
CCTGTGGAGCTTCTTCTGAA+CGG 0.591583 1:+99024345 None:intergenic
ATACTTGATCACAGCAATGT+TGG 0.591879 1:+99029315 None:intergenic
ATTGATTTATTGGAAATGGC+GGG 0.593123 1:-99029376 MsG0180006027.01.T01:exon
ATACGATCTTGTTGAAAGGA+AGG 0.593700 1:+99029190 None:intergenic
ACTTGTTATTGTTATTGCTG+TGG 0.594012 1:-99025780 MsG0180006027.01.T01:intron
GGGTGATAGTTGGGTACTGA+TGG 0.595158 1:-99029356 MsG0180006027.01.T01:CDS
GTTGTGGTGCAAAGATGAGC+GGG 0.596599 1:+99029229 None:intergenic
CCACATACGATCTTGTTGAA+AGG 0.601733 1:+99029186 None:intergenic
AACAGTATCACGCATTCCTG+AGG 0.602816 1:+99025088 None:intergenic
TCGTATGTGGCTCAATGGCA+AGG 0.603313 1:-99029173 MsG0180006027.01.T01:intron
TGAGGTCATCTGAATTTGGA+GGG 0.603420 1:+99023611 None:intergenic
GCCAGCTGTCTGCTATTGCA+AGG 0.603691 1:-99026114 MsG0180006027.01.T01:intron
GCTTGTCGTAGCTTATTTGG+GGG 0.616141 1:-99025967 MsG0180006027.01.T01:CDS
GTAGGAAATTTCTCTTTCCG+GGG 0.619131 1:-99028519 MsG0180006027.01.T01:intron
GATTGATTTATTGGAAATGG+CGG 0.620199 1:-99029377 MsG0180006027.01.T01:exon
ATATGCACCAGACCAGGAAG+GGG 0.629282 1:-99023349 MsG0180006027.01.T01:CDS
ATGAAGAATAGATCAACCAT+GGG 0.632388 1:+99023245 None:intergenic
GAGGTCCCGTAAACAAAACA+AGG 0.633143 1:-99029683 None:intergenic
TTGATCACAGCAATGTTGGT+TGG 0.639254 1:+99029319 None:intergenic
ACATGAATGATACATCCCAT+AGG 0.641400 1:-99024505 MsG0180006027.01.T01:intron
ATTCCATCACAAAAGTACAA+GGG 0.644199 1:-99023388 MsG0180006027.01.T01:CDS
GCAGCAGTAGAACGAAGAAG+GGG 0.655083 1:-99029522 MsG0180006027.01.T01:five_prime_UTR
CTGAGTAACAGATCTAAGTG+AGG 0.656597 1:+99029417 None:intergenic
GTTTGATGCAGGGCCAAATG+CGG 0.656830 1:-99023695 MsG0180006027.01.T01:CDS
TCATTCATGTAAAATATAGG+GGG 0.658384 1:+99024518 None:intergenic
GCTTCCCAAATAAGGTACAT+GGG 0.661948 1:-99023275 MsG0180006027.01.T01:exon
AGTTGTGGTGCAAAGATGAG+CGG 0.662479 1:+99029228 None:intergenic
GAATGGAAGTGATAGTCTTG+CGG 0.663425 1:-99025834 MsG0180006027.01.T01:CDS
ACTAACAGAAACGGTAGTTG+TGG 0.671981 1:+99029213 None:intergenic
ATTGCTGTGATCAAGTATTG+GGG 0.675109 1:-99029310 MsG0180006027.01.T01:CDS
GTACATGGGAAATATTCCCA+TGG 0.678115 1:-99023261 MsG0180006027.01.T01:three_prime_UTR
TTATATGCACCAGACCAGGA+AGG 0.679375 1:-99023351 MsG0180006027.01.T01:CDS
TAGGAAATTTCTCTTTCCGG+GGG 0.687639 1:-99028518 MsG0180006027.01.T01:CDS
AACAAGGAAAGAGTTAGGGT+AGG 0.690689 1:-99029667 MsG0180006027.01.T01:five_prime_UTR
GGGTATTAAGATCACCAAGG+AGG 0.716838 1:-99028432 MsG0180006027.01.T01:CDS
AAAGGGTATTAAGATCACCA+AGG 0.729322 1:-99028435 MsG0180006027.01.T01:CDS
TCCATCACAAAAGTACAAGG+GGG 0.737564 1:-99023386 MsG0180006027.01.T01:CDS
AAGCCAATCCAGCTGCAGTG+GGG 0.738884 1:+99028366 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTATCTAATAAAATTG+TGG + Chr1:99025712-99025731 None:intergenic 10.0%
!! CAAATAAATAAAAAATTATG+TGG + Chr1:99027408-99027427 None:intergenic 10.0%
!! TATATATATTAGTTAGTAAT+GGG + Chr1:99023207-99023226 None:intergenic 10.0%
!! TTATATATATTAGTTAGTAA+TGG + Chr1:99023208-99023227 None:intergenic 10.0%
!!! TTTTACTTTCAATTTTTAAT+TGG - Chr1:99024108-99024127 MsG0180006027.01.T01:intron 10.0%
!! AGATTATTGAATAAAGAATA+AGG + Chr1:99026288-99026307 None:intergenic 15.0%
!! ATAACTATAATAGATTGAAT+CGG - Chr1:99025762-99025781 MsG0180006027.01.T01:intron 15.0%
!! CATATAGAGTATATATTATA+CGG - Chr1:99028870-99028889 MsG0180006027.01.T01:intron 15.0%
!! CATTAATTAATAAAAATCTG+AGG - Chr1:99025889-99025908 MsG0180006027.01.T01:intron 15.0%
!! TAATTCATTAGTTACTTATT+TGG - Chr1:99028545-99028564 MsG0180006027.01.T01:intron 15.0%
!! TATCATTCATGTAAAATATA+GGG + Chr1:99028161-99028180 None:intergenic 15.0%
!! TTATATAAATAATTATGCCA+TGG - Chr1:99027954-99027973 MsG0180006027.01.T01:intron 15.0%
!! TTATTTGGAAAACAAATTAA+AGG - Chr1:99028560-99028579 MsG0180006027.01.T01:intron 15.0%
!! TTCTTTATTCAATAATCTTT+AGG - Chr1:99026290-99026309 MsG0180006027.01.T01:intron 15.0%
!!! ATTTCTTTAGAAATATACAT+TGG + Chr1:99027726-99027745 None:intergenic 15.0%
!!! CATTTTTTATATGTATTTGA+TGG - Chr1:99023892-99023911 MsG0180006027.01.T01:intron 15.0%
!!! CTCAGATTTTTATTAATTAA+TGG + Chr1:99025891-99025910 None:intergenic 15.0%
!!! TATTTTATTTAAATCTCTGT+GGG - Chr1:99026760-99026779 MsG0180006027.01.T01:intron 15.0%
!!! TGTATTCTTTTGATATTTAT+AGG - Chr1:99026813-99026832 MsG0180006027.01.T01:intron 15.0%
!!! TTAAATTTTCAATTCTTGAT+GGG - Chr1:99023577-99023596 MsG0180006027.01.T01:intron 15.0%
!!! TTACTATTACTTTTATATGA+GGG - Chr1:99026441-99026460 MsG0180006027.01.T01:intron 15.0%
!!! TTTAAATTTTCAATTCTTGA+TGG - Chr1:99023576-99023595 MsG0180006027.01.T01:intron 15.0%
!!! TTTCTTTAGAAATATACATT+GGG + Chr1:99027725-99027744 None:intergenic 15.0%
!! AAAGTAATATTCATCTAACA+TGG + Chr1:99027683-99027702 None:intergenic 20.0%
!! AAAGTTTAAAGAGAAAAAAG+AGG + Chr1:99023536-99023555 None:intergenic 20.0%
!! AACACAAATAATTATGTCAT+GGG + Chr1:99029527-99029546 None:intergenic 20.0%
!! AAGATAAAAAATACTGCTTT+GGG + Chr1:99027431-99027450 None:intergenic 20.0%
!! AAGATTTAGGAAAAAACAAT+CGG + Chr1:99028488-99028507 None:intergenic 20.0%
!! AAGTTTAAAGAGAAAAAAGA+GGG + Chr1:99023535-99023554 None:intergenic 20.0%
!! AATGATAAGAAGAAAATTAG+AGG - Chr1:99024794-99024813 MsG0180006027.01.T01:intron 20.0%
!! AGAATAACCAAAATATTCAT+GGG + Chr1:99024892-99024911 None:intergenic 20.0%
!! ATATTGCCAAATTAGTATTA+TGG + Chr1:99027319-99027338 None:intergenic 20.0%
!! ATCATACCATAATACTAATT+TGG - Chr1:99027310-99027329 MsG0180006027.01.T01:intron 20.0%
!! ATCATTCATGTAAAATATAG+GGG + Chr1:99028160-99028179 None:intergenic 20.0%
!! ATGATAAGAAGAAAATTAGA+GGG - Chr1:99024795-99024814 MsG0180006027.01.T01:intron 20.0%
!! CAAAAGAATACAAATTACAA+TGG + Chr1:99026805-99026824 None:intergenic 20.0%
!! CTAGAAATAAATAATGAGAT+GGG + Chr1:99027535-99027554 None:intergenic 20.0%
!! CTGTATATAGTAACAATATT+CGG + Chr1:99026671-99026690 None:intergenic 20.0%
!! CTTATTAATAACTCAATACT+TGG + Chr1:99026130-99026149 None:intergenic 20.0%
!! GTATCATTCATGTAAAATAT+AGG + Chr1:99028162-99028181 None:intergenic 20.0%
!! GTTGAACTAATAAATGTTAT+TGG - Chr1:99025384-99025403 MsG0180006027.01.T01:intron 20.0%
!! TAATCAAACTTAAATTACCA+TGG + Chr1:99027974-99027993 None:intergenic 20.0%
!! TAGAATAACCAAAATATTCA+TGG + Chr1:99024893-99024912 None:intergenic 20.0%
!! TATATAAACATCATTCATGT+GGG + Chr1:99028831-99028850 None:intergenic 20.0%
!! TTATTTATTCATTTCCCATT+TGG + Chr1:99023052-99023071 None:intergenic 20.0%
!! TTCAAACTTTATGTTCTTTA+AGG - Chr1:99026321-99026340 MsG0180006027.01.T01:intron 20.0%
!! TTTGTCTCTATTTAATTGAA+TGG - Chr1:99026930-99026949 MsG0180006027.01.T01:intron 20.0%
!!! ATACTTGATAATAATATGAG+AGG + Chr1:99028741-99028760 None:intergenic 20.0%
!!! ATTCTTTTGATATTTATAGG+AGG - Chr1:99026816-99026835 MsG0180006027.01.T01:intron 20.0%
!!! GTATTTTATTTAAATCTCTG+TGG - Chr1:99026759-99026778 MsG0180006027.01.T01:intron 20.0%
!!! GTTACTATTACTTTTATATG+AGG - Chr1:99026440-99026459 MsG0180006027.01.T01:intron 20.0%
!!! TACTTTCAATTTTTAATTGG+TGG - Chr1:99024111-99024130 MsG0180006027.01.T01:intron 20.0%
!!! TTTGATTGATTTATTGGAAA+TGG - Chr1:99023294-99023313 MsG0180006027.01.T01:CDS 20.0%
! AAACTAAAAGAAACTTCCTA+TGG - Chr1:99028449-99028468 MsG0180006027.01.T01:CDS 25.0%
! AAGTATTAAATGGTATGTTG+TGG - Chr1:99026998-99027017 MsG0180006027.01.T01:intron 25.0%
! ACTAAAACAACATGGAAATT+AGG + Chr1:99026401-99026420 None:intergenic 25.0%
! AGTAAGCATGAATTTAAACA+CGG - Chr1:99027884-99027903 MsG0180006027.01.T01:intron 25.0%
! ATACTAATTTGGCAATATTG+TGG - Chr1:99027321-99027340 MsG0180006027.01.T01:intron 25.0%
! ATACTCATAACAATTACATG+TGG + Chr1:99024441-99024460 None:intergenic 25.0%
! ATAGAAACCTATGAATTTGT+AGG + Chr1:99028917-99028936 None:intergenic 25.0%
! ATAGAAAGAAAGAATATCGA+CGG + Chr1:99025486-99025505 None:intergenic 25.0%
! ATCATTAACAGGTAAGATTA+GGG + Chr1:99023404-99023423 None:intergenic 25.0%
! ATGTAGTAATTTGAGAAAAC+TGG + Chr1:99023785-99023804 None:intergenic 25.0%
! ATGTTTATTGTCTTATGGTT+TGG - Chr1:99026250-99026269 MsG0180006027.01.T01:intron 25.0%
! CAAATGAATTTCCAATGAAT+TGG + Chr1:99023718-99023737 None:intergenic 25.0%
! CAAGATAAAAAATACTGCTT+TGG + Chr1:99027432-99027451 None:intergenic 25.0%
! CAATAACCATTACAATTACA+TGG + Chr1:99024480-99024499 None:intergenic 25.0%
! CATGTAATTGTAATGGTTAT+TGG - Chr1:99024478-99024497 MsG0180006027.01.T01:intron 25.0%
! CCTAGAAATAAATAATGAGA+TGG + Chr1:99027536-99027555 None:intergenic 25.0%
! CGAATATTGTTACTATATAC+AGG - Chr1:99026669-99026688 MsG0180006027.01.T01:intron 25.0%
! GAACACAAATAATTATGTCA+TGG + Chr1:99029528-99029547 None:intergenic 25.0%
! GAACTTAGTATGAAAGATTT+AGG + Chr1:99028501-99028520 None:intergenic 25.0%
! GAATAACCAAAATATTCATG+GGG + Chr1:99024891-99024910 None:intergenic 25.0%
! GAGATTAAATTGAATTCGTT+CGG + Chr1:99023179-99023198 None:intergenic 25.0%
! GATGTTGAGGATAATAAAAA+GGG - Chr1:99024222-99024241 MsG0180006027.01.T01:intron 25.0%
! GTATATAAACATCATTCATG+TGG + Chr1:99028832-99028851 None:intergenic 25.0%
! TAATCAATGACAATCAGATT+TGG + Chr1:99024630-99024649 None:intergenic 25.0%
! TACTATTTGAGAGAGAAAAA+TGG + Chr1:99027868-99027887 None:intergenic 25.0%
! TATCATTAACAGGTAAGATT+AGG + Chr1:99023405-99023424 None:intergenic 25.0%
! TCATTCATGTAAAATATAGG+GGG + Chr1:99028159-99028178 None:intergenic 25.0%
! TGAATTACTTCTGATGTAAA+AGG + Chr1:99028532-99028551 None:intergenic 25.0%
! TGATGTTGAGGATAATAAAA+AGG - Chr1:99024221-99024240 MsG0180006027.01.T01:intron 25.0%
! TGTGATAATAAACAATCAAG+TGG + Chr1:99023874-99023893 None:intergenic 25.0%
! TTATTAGTTCAACTATGTTG+TGG + Chr1:99025377-99025396 None:intergenic 25.0%
! TTCCAATAAATCAATCAAAG+AGG + Chr1:99023293-99023312 None:intergenic 25.0%
! TTTATATGAGGGTTTATACT+AGG - Chr1:99026452-99026471 MsG0180006027.01.T01:intron 25.0%
! TTTATGACTTTAAACTTGCA+AGG - Chr1:99026594-99026613 MsG0180006027.01.T01:intron 25.0%
! TTTGGAAAACAAATTAAAGG+AGG - Chr1:99028563-99028582 MsG0180006027.01.T01:intron 25.0%
!! AAACTTTATGTTCTTTAAGG+CGG - Chr1:99026324-99026343 MsG0180006027.01.T01:intron 25.0%
!! AATTTTCCCCATGAATATTT+TGG - Chr1:99024882-99024901 MsG0180006027.01.T01:intron 25.0%
!! ATATTGTCTTTAATTTCTGG+AGG + Chr1:99029268-99029287 None:intergenic 25.0%
!! CCATCTCATTATTTATTTCT+AGG - Chr1:99027533-99027552 MsG0180006027.01.T01:intron 25.0%
!! GGAATATTGTCTTTAATTTC+TGG + Chr1:99029271-99029290 None:intergenic 25.0%
!! GTTTAAGATCTAAATCAAAC+AGG - Chr1:99024663-99024682 MsG0180006027.01.T01:intron 25.0%
!! TTCCTCTTTGATTGATTTAT+TGG - Chr1:99023288-99023307 MsG0180006027.01.T01:CDS 25.0%
!!! ATATTTTGAGCTAATATAGC+CGG + Chr1:99029468-99029487 None:intergenic 25.0%
!!! ATTCTAGAGCAAATATTGAA+AGG - Chr1:99024907-99024926 MsG0180006027.01.T01:intron 25.0%
!!! ATTTTTTCTGCAACAAAATC+CGG + Chr1:99025612-99025631 None:intergenic 25.0%
!!! GTTTTAGAATATTGAGTGAT+TGG + Chr1:99028433-99028452 None:intergenic 25.0%
AAAAACAGAAACTGTGAACT+TGG + Chr1:99029554-99029573 None:intergenic 30.0%
AAAGCAACTTCTGAATCAAA+AGG + Chr1:99029036-99029055 None:intergenic 30.0%
AACAAAACAAGGAAAGAGTT+AGG - Chr1:99023002-99023021 MsG0180006027.01.T01:three_prime_UTR 30.0%
AAGAAGAAAATTAGAGGGAA+GGG - Chr1:99024800-99024819 MsG0180006027.01.T01:intron 30.0%
AAGCAACTTCTGAATCAAAA+GGG + Chr1:99029035-99029054 None:intergenic 30.0%
AATGAAGAATAGATCAACCA+TGG + Chr1:99029433-99029452 None:intergenic 30.0%
ACAAAACAAGGAAAGAGTTA+GGG - Chr1:99023003-99023022 MsG0180006027.01.T01:three_prime_UTR 30.0%
ACACTGATACTATCATTAAC+AGG + Chr1:99023415-99023434 None:intergenic 30.0%
ACTAACACCTACAAATTCAT+AGG - Chr1:99028907-99028926 MsG0180006027.01.T01:intron 30.0%
ACTATAATAGATTGAATCGG+TGG - Chr1:99025765-99025784 MsG0180006027.01.T01:intron 30.0%
AGTTGCATGTTACAAGAAAT+AGG - Chr1:99024703-99024722 MsG0180006027.01.T01:intron 30.0%
ATAGTAAGATGCTTGAAAGT+AGG + Chr1:99027823-99027842 None:intergenic 30.0%
ATCTAAACCGTGTATTAGAT+TGG - Chr1:99026018-99026037 MsG0180006027.01.T01:intron 30.0%
ATGAAGAATAGATCAACCAT+GGG + Chr1:99029432-99029451 None:intergenic 30.0%
ATTCAACACATCAGATTCTA+AGG + Chr1:99025682-99025701 None:intergenic 30.0%
ATTGTTACTATATACAGGCA+AGG - Chr1:99026674-99026693 MsG0180006027.01.T01:intron 30.0%
CAACTATTCTATTTCACTTC+AGG - Chr1:99028280-99028299 MsG0180006027.01.T01:intron 30.0%
CATAAGTTTGAGCATAATGT+GGG - Chr1:99024582-99024601 MsG0180006027.01.T01:CDS 30.0%
CGGATATTATAAAACACCAT+AGG + Chr1:99028468-99028487 None:intergenic 30.0%
CTACTGTAACTAAAACAACA+TGG + Chr1:99026409-99026428 None:intergenic 30.0%
CTCAATTATGGCTACAAATA+CGG + Chr1:99026104-99026123 None:intergenic 30.0%
CTTGTGTAAAAAACATGGTA+AGG - Chr1:99025101-99025120 MsG0180006027.01.T01:CDS 30.0%
GATAATAAACAATCAAGTGG+TGG + Chr1:99023871-99023890 None:intergenic 30.0%
GTATTTGTAGCCATAATTGA+GGG - Chr1:99026103-99026122 MsG0180006027.01.T01:intron 30.0%
GTGAAAAAGATGCAAAATCA+CGG + Chr1:99028083-99028102 None:intergenic 30.0%
GTTGCATGTTTATTGTCTTA+TGG - Chr1:99026245-99026264 MsG0180006027.01.T01:intron 30.0%
TAAGAAGAAAATTAGAGGGA+AGG - Chr1:99024799-99024818 MsG0180006027.01.T01:intron 30.0%
TAATTGTAATGGTTATTGGC+CGG - Chr1:99024482-99024501 MsG0180006027.01.T01:intron 30.0%
TAGTAAGATGCTTGAAAGTA+GGG + Chr1:99027822-99027841 None:intergenic 30.0%
TATGTGAAGCTCATATATTC+TGG - Chr1:99027028-99027047 MsG0180006027.01.T01:intron 30.0%
TATTTCCCATGTACCTTATT+TGG + Chr1:99029407-99029426 None:intergenic 30.0%
TGAGTATTTCTCCAATTCAT+TGG - Chr1:99023704-99023723 MsG0180006027.01.T01:CDS 30.0%
TGATATTTATAGGAGGAGAA+TGG - Chr1:99026823-99026842 MsG0180006027.01.T01:intron 30.0%
TGGATTCCATGTAATTGTAA+TGG - Chr1:99024471-99024490 MsG0180006027.01.T01:intron 30.0%
TGGTTGATCTATTCTTCATT+AGG - Chr1:99029433-99029452 MsG0180006027.01.T01:five_prime_UTR 30.0%
TGTTACAAGAAATAGGTTTG+AGG - Chr1:99024710-99024729 MsG0180006027.01.T01:intron 30.0%
TTAAACCTTTACTCCATAAC+TGG - Chr1:99028773-99028792 MsG0180006027.01.T01:intron 30.0%
TTACATGGAATCCAATTTGT+TGG + Chr1:99024465-99024484 None:intergenic 30.0%
TTATCTCATTATCCAAACTC+AGG - Chr1:99024845-99024864 MsG0180006027.01.T01:intron 30.0%
TTATGAGTATGCCAACAAAT+TGG - Chr1:99024451-99024470 MsG0180006027.01.T01:intron 30.0%
TTATTCATTTCCCATTTGGA+TGG + Chr1:99023048-99023067 None:intergenic 30.0%
TTCATGAATAAACTTTGACC+AGG - Chr1:99024933-99024952 MsG0180006027.01.T01:intron 30.0%
TTTCTCATTTGAACCACAAT+AGG - Chr1:99028011-99028030 MsG0180006027.01.T01:intron 30.0%
TTTGCTTCCTAATGTGTTAA+TGG - Chr1:99027358-99027377 MsG0180006027.01.T01:intron 30.0%
! ACTTGTCTTTTTATGAGTGT+TGG + Chr1:99025333-99025352 None:intergenic 30.0%
! ATTAAAAGCGCAGAATGAAA+AGG + Chr1:99027789-99027808 None:intergenic 30.0%
! ATTCCATCACAAAAGTACAA+GGG - Chr1:99029286-99029305 MsG0180006027.01.T01:CDS 30.0%
! ATTGATTTATTGGAAATGGC+GGG - Chr1:99023298-99023317 MsG0180006027.01.T01:CDS 30.0%
! ATTTCCCATGTACCTTATTT+GGG + Chr1:99029406-99029425 None:intergenic 30.0%
! ATTTGTTTCGGGTACATAAT+CGG - Chr1:99025790-99025809 MsG0180006027.01.T01:CDS 30.0%
! GATTGATTTATTGGAAATGG+CGG - Chr1:99023297-99023316 MsG0180006027.01.T01:CDS 30.0%
! GCATTTTTATGTGTATCTGT+TGG - Chr1:99023617-99023636 MsG0180006027.01.T01:CDS 30.0%
! GGGTATTATATGCATTTTCA+GGG + Chr1:99028811-99028830 None:intergenic 30.0%
! GTTTATATACACAGCTTGTT+TGG - Chr1:99028842-99028861 MsG0180006027.01.T01:intron 30.0%
! TATTCCATCACAAAAGTACA+AGG - Chr1:99029285-99029304 MsG0180006027.01.T01:CDS 30.0%
! TGGGTATTATATGCATTTTC+AGG + Chr1:99028812-99028831 None:intergenic 30.0%
!! ACTTGTTATTGTTATTGCTG+TGG - Chr1:99026894-99026913 MsG0180006027.01.T01:intron 30.0%
!! ATATTGGCCTTGGATAATAA+AGG - Chr1:99025004-99025023 MsG0180006027.01.T01:intron 30.0%
!! GTTAAGTTTTGTCAATTGTC+TGG - Chr1:99028404-99028423 MsG0180006027.01.T01:CDS 30.0%
!! TATTGGCCTTGGATAATAAA+GGG - Chr1:99025005-99025024 MsG0180006027.01.T01:intron 30.0%
!! TTGCCTTGTTATTCTCTAAT+AGG - Chr1:99027101-99027120 MsG0180006027.01.T01:intron 30.0%
!! TTTATTTCTAGGTTAGCTCT+CGG - Chr1:99027544-99027563 MsG0180006027.01.T01:intron 30.0%
!!! AACAGGTGCTTTTTAAGTTT+TGG - Chr1:99029085-99029104 MsG0180006027.01.T01:intron 30.0%
!!! CTCTTTCCTTGTTTTGTTTA+CGG + Chr1:99023000-99023019 None:intergenic 30.0%
!!! GAAAAGGTTTTAGGAAAAGA+GGG + Chr1:99027773-99027792 None:intergenic 30.0%
!!! TACCATGTTTTTTACACAAG+AGG + Chr1:99025101-99025120 None:intergenic 30.0%
!!! TGAAAAGGTTTTAGGAAAAG+AGG + Chr1:99027774-99027793 None:intergenic 30.0%
!!! TTCTTGTGGTTTTGTCTTTA+TGG - Chr1:99025973-99025992 MsG0180006027.01.T01:CDS 30.0%
!!! TTGTTTTAGTTACAGTAGCA+TGG - Chr1:99026411-99026430 MsG0180006027.01.T01:intron 30.0%
AAACCGTGTATTAGATTGGA+TGG - Chr1:99026022-99026041 MsG0180006027.01.T01:intron 35.0%
AAACTCCAGTTATGGAGTAA+AGG + Chr1:99028781-99028800 None:intergenic 35.0%
AAAGGAAGGACTAACAGAAA+CGG + Chr1:99023473-99023492 None:intergenic 35.0%
AAGAGCTTGAGAGAAAGAAA+TGG + Chr1:99027065-99027084 None:intergenic 35.0%
AAGATTCCAGAGCTGTTTAA+GGG - Chr1:99024179-99024198 MsG0180006027.01.T01:intron 35.0%
AAGTCAATTGCAAAAGATGC+TGG - Chr1:99029205-99029224 MsG0180006027.01.T01:CDS 35.0%
AATACCATACAACGCAATTG+AGG + Chr1:99025231-99025250 None:intergenic 35.0%
AATACTTGGTCCCTCAATTA+TGG + Chr1:99026116-99026135 None:intergenic 35.0%
AATAGGAAATAGTGCCAAAG+AGG - Chr1:99028028-99028047 MsG0180006027.01.T01:intron 35.0%
AATTATCAGAGCCTACCTAT+GGG + Chr1:99028187-99028206 None:intergenic 35.0%
AATTATGTCATGGGTACAAC+AGG + Chr1:99029518-99029537 None:intergenic 35.0%
AATTGACAAAACTTAACCCC+AGG + Chr1:99028401-99028420 None:intergenic 35.0%
ACATGAATGATACATCCCAT+AGG - Chr1:99028169-99028188 MsG0180006027.01.T01:intron 35.0%
ACATTGCTGTGATCAAGTAT+TGG - Chr1:99023362-99023381 MsG0180006027.01.T01:CDS 35.0%
ACCAAGAAAATTCAAACCTG+TGG + Chr1:99028348-99028367 None:intergenic 35.0%
AGAAATAGGTTTGAGGATCT+TGG - Chr1:99024717-99024736 MsG0180006027.01.T01:intron 35.0%
AGAAGAGAATCCATCCAAAT+GGG - Chr1:99023035-99023054 MsG0180006027.01.T01:three_prime_UTR 35.0%
AGAGCTTGAGAGAAAGAAAT+GGG + Chr1:99027064-99027083 None:intergenic 35.0%
AGATTTCGCAATTTGAGAAC+TGG + Chr1:99024526-99024545 None:intergenic 35.0%
AGCCTCTTGTGTAAAAAACA+TGG - Chr1:99025096-99025115 MsG0180006027.01.T01:CDS 35.0%
AGTCAATTGCAAAAGATGCT+GGG - Chr1:99029206-99029225 MsG0180006027.01.T01:CDS 35.0%
ATACGATCTTGTTGAAAGGA+AGG + Chr1:99023487-99023506 None:intergenic 35.0%
ATACTTGATCACAGCAATGT+TGG + Chr1:99023362-99023381 None:intergenic 35.0%
ATATATGTCTCGTATGCAGA+AGG - Chr1:99028369-99028388 MsG0180006027.01.T01:CDS 35.0%
ATCATCCGAGTCCAATAAAA+AGG + Chr1:99025202-99025221 None:intergenic 35.0%
ATCTTGGAATTGTTCGAAGT+AGG - Chr1:99024733-99024752 MsG0180006027.01.T01:intron 35.0%
ATGTACTTCATCACATTAGC+TGG + Chr1:99028673-99028692 None:intergenic 35.0%
CACCAAGAAAACAAAATCAC+GGG - Chr1:99024958-99024977 MsG0180006027.01.T01:intron 35.0%
CACTTGATTGAAGACATTAC+TGG + Chr1:99028643-99028662 None:intergenic 35.0%
CATATCAATGTTCACAGAAC+TGG + Chr1:99028600-99028619 None:intergenic 35.0%
CATTGCTGTGATCAAGTATT+GGG - Chr1:99023363-99023382 MsG0180006027.01.T01:CDS 35.0%
CATTTGGCCATTAACACATT+AGG + Chr1:99027368-99027387 None:intergenic 35.0%
CCACATTATGCTCAAACTTA+TGG + Chr1:99024584-99024603 None:intergenic 35.0%
CCACCAAGAAAACAAAATCA+CGG - Chr1:99024957-99024976 MsG0180006027.01.T01:intron 35.0%
CCATAAGTTTGAGCATAATG+TGG - Chr1:99024581-99024600 MsG0180006027.01.T01:CDS 35.0%
CGTATTTGTAGCCATAATTG+AGG - Chr1:99026102-99026121 MsG0180006027.01.T01:intron 35.0%
CGTTGTATGGTATTTGTAGT+TGG - Chr1:99025237-99025256 MsG0180006027.01.T01:intron 35.0%
CTAATGTGTTAATGGCCAAA+TGG - Chr1:99027366-99027385 MsG0180006027.01.T01:intron 35.0%
CTCTTCTCAACAGTGAAAAT+GGG - Chr1:99029377-99029396 MsG0180006027.01.T01:exon 35.0%
CTTATCATTCTGTCTTAGTC+TGG + Chr1:99024783-99024802 None:intergenic 35.0%
CTTGTCACCAATAATGTAAC+TGG + Chr1:99029188-99029207 None:intergenic 35.0%
GACATTACTGGCATTCAATT+CGG + Chr1:99028631-99028650 None:intergenic 35.0%
GATAGATTTCCAGTGGATAT+TGG - Chr1:99024988-99025007 MsG0180006027.01.T01:intron 35.0%
GATTATGTACCCGAAACAAA+TGG + Chr1:99025791-99025810 None:intergenic 35.0%
GCTCAGGCGAATTAAATTAA+AGG + Chr1:99029671-99029690 None:intergenic 35.0%
GGATTTGTGAAGTGGAAAAT+GGG - Chr1:99026728-99026747 MsG0180006027.01.T01:intron 35.0%
GTCTACTACTTGCTTGTTTA+TGG - Chr1:99024008-99024027 MsG0180006027.01.T01:intron 35.0%
GTGAAAGACTACACAAATAC+CGG + Chr1:99024504-99024523 None:intergenic 35.0%
GTGTAGGAAATTTCTCTTTC+CGG - Chr1:99024153-99024172 MsG0180006027.01.T01:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - Chr1:99025046-99025065 MsG0180006027.01.T01:intron 35.0%
TAATCAGCATTGTTGACAAG+TGG - Chr1:99028304-99028323 MsG0180006027.01.T01:intron 35.0%
TAGCTTATACGTTTGATGCA+GGG - Chr1:99028969-99028988 MsG0180006027.01.T01:intron 35.0%
TATGCAGAAGGTTTATTCCT+GGG - Chr1:99028381-99028400 MsG0180006027.01.T01:CDS 35.0%
TATTGGACTCGGATGATAAT+TGG - Chr1:99025205-99025224 MsG0180006027.01.T01:intron 35.0%
TCAATGACAATCAGATTTGG+TGG + Chr1:99024627-99024646 None:intergenic 35.0%
TCACCAATAATGTAACTGGA+GGG + Chr1:99029184-99029203 None:intergenic 35.0%
TCATCCGAGTCCAATAAAAA+GGG + Chr1:99025201-99025220 None:intergenic 35.0%
TCCATAGTGCTTAGATGAAA+TGG + Chr1:99027469-99027488 None:intergenic 35.0%
TCCATTTCATCTAAGCACTA+TGG - Chr1:99027465-99027484 MsG0180006027.01.T01:intron 35.0%
TCGCCTATTAGAGAATAACA+AGG + Chr1:99027107-99027126 None:intergenic 35.0%
TGATGTGCCATAATAGGATT+GGG + Chr1:99024759-99024778 None:intergenic 35.0%
TGCAACTTCAAATCTAATCC+AGG + Chr1:99024690-99024709 None:intergenic 35.0%
TGCTCAATTCAATACAGGAA+AGG + Chr1:99029648-99029667 None:intergenic 35.0%
TGTAGGAAATTTCTCTTTCC+GGG - Chr1:99024154-99024173 MsG0180006027.01.T01:intron 35.0%
TGTGTATCTGTTGGATTCAT+TGG - Chr1:99023626-99023645 MsG0180006027.01.T01:CDS 35.0%
TTGATACACAAATTGCACGA+AGG + Chr1:99027660-99027679 None:intergenic 35.0%
TTTCTTAGATGACCCTTTCA+AGG - Chr1:99029489-99029508 MsG0180006027.01.T01:five_prime_UTR 35.0%
TTTGGCACTATTTCCTATTG+TGG + Chr1:99028027-99028046 None:intergenic 35.0%
! ATTGCTGTGATCAAGTATTG+GGG - Chr1:99023364-99023383 MsG0180006027.01.T01:CDS 35.0%
! CTTATGGTTTGGATTCATAG+AGG - Chr1:99026261-99026280 MsG0180006027.01.T01:intron 35.0%
! TCCACAGGTTTGAATTTTCT+TGG - Chr1:99028344-99028363 MsG0180006027.01.T01:CDS 35.0%
! TCCATTTTCAGTATCCTCTT+TGG + Chr1:99028045-99028064 None:intergenic 35.0%
! TTCCATCACAAAAGTACAAG+GGG - Chr1:99029287-99029306 MsG0180006027.01.T01:CDS 35.0%
! TTGGTGGAATTTCGTTTTGT+CGG - Chr1:99024127-99024146 MsG0180006027.01.T01:intron 35.0%
! TTGTCTTTAATTTCTGGAGG+TGG + Chr1:99029265-99029284 None:intergenic 35.0%
! TTGTTATTCTCTAATAGGCG+AGG - Chr1:99027106-99027125 MsG0180006027.01.T01:intron 35.0%
!! AAAGGGTATTAAGATCACCA+AGG - Chr1:99024239-99024258 MsG0180006027.01.T01:intron 35.0%
!! AAAGGTGCTCAATTCAATAC+AGG + Chr1:99029653-99029672 None:intergenic 35.0%
!! AACTTAAAAAGCACCTGTTG+AGG + Chr1:99029084-99029103 None:intergenic 35.0%
!! AACTTGCTGATGAAAAGCAT+TGG - Chr1:99026866-99026885 MsG0180006027.01.T01:intron 35.0%
!! ACTTGCTGATGAAAAGCATT+GGG - Chr1:99026867-99026886 MsG0180006027.01.T01:intron 35.0%
!! ATATGCATTTTCAGGGACAT+AGG + Chr1:99028804-99028823 None:intergenic 35.0%
!! ATGAAGCACTGAAACATACA+TGG + Chr1:99023971-99023990 None:intergenic 35.0%
!! ATTGGCCTTGGATAATAAAG+GGG - Chr1:99025006-99025025 MsG0180006027.01.T01:intron 35.0%
!!! CTCTCAAGCTCTTTTTAAGT+TGG - Chr1:99027072-99027091 MsG0180006027.01.T01:intron 35.0%
!!! TTGTGGTTTTGTCTTTATGG+AGG - Chr1:99025976-99025995 MsG0180006027.01.T01:CDS 35.0%
!!! TTTGGCTTTTCACATTCTTG+TGG - Chr1:99025959-99025978 MsG0180006027.01.T01:CDS 35.0%
AACAAGGAAAGAGTTAGGGT+AGG - Chr1:99023007-99023026 MsG0180006027.01.T01:three_prime_UTR 40.0%
AAGTAGGCCCAATCCTATTA+TGG - Chr1:99024749-99024768 MsG0180006027.01.T01:intron 40.0%
ACAACTTTACCTTTGCACCA+AGG + Chr1:99025035-99025054 None:intergenic 40.0%
ACACAAATTGCACGAAGGAA+AGG + Chr1:99027655-99027674 None:intergenic 40.0%
ACTAACAGAAACGGTAGTTG+TGG + Chr1:99023464-99023483 None:intergenic 40.0%
ACTATATACAGGCAAGGATC+AGG - Chr1:99026680-99026699 MsG0180006027.01.T01:intron 40.0%
ACTTCTGGTGTCTGGAAATT+TGG - Chr1:99025941-99025960 MsG0180006027.01.T01:intron 40.0%
AGTGCTTGTCGTAGCTTATT+TGG - Chr1:99026704-99026723 MsG0180006027.01.T01:intron 40.0%
AGTTACAGTAGCATGGTTCT+TGG - Chr1:99026418-99026437 MsG0180006027.01.T01:intron 40.0%
ATGAACAAATCTGTCTGTCC+AGG + Chr1:99026224-99026243 None:intergenic 40.0%
ATGAAGCACAGACACATACA+CGG + Chr1:99023836-99023855 None:intergenic 40.0%
ATGCAGAAGGTTTATTCCTG+GGG - Chr1:99028382-99028401 MsG0180006027.01.T01:CDS 40.0%
CAAATTCAGATGACCTCAAC+AGG - Chr1:99029068-99029087 MsG0180006027.01.T01:intron 40.0%
CAATTATCAGAGCCTACCTA+TGG + Chr1:99028188-99028207 None:intergenic 40.0%
CACAAATTGCACGAAGGAAA+GGG + Chr1:99027654-99027673 None:intergenic 40.0%
CAGGAAAAACTTCTACATGG+CGG + Chr1:99026205-99026224 None:intergenic 40.0%
CCACATACGATCTTGTTGAA+AGG + Chr1:99023491-99023510 None:intergenic 40.0%
CCACCATCCAATCTAATACA+CGG + Chr1:99026028-99026047 None:intergenic 40.0%
CCTTTCAACAAGATCGTATG+TGG - Chr1:99023488-99023507 MsG0180006027.01.T01:CDS 40.0%
CGCTACAATTGAATCCACAA+TGG + Chr1:99025446-99025465 None:intergenic 40.0%
CGTACAATACACCAATTGAC+GGG - Chr1:99025127-99025146 MsG0180006027.01.T01:intron 40.0%
CTGAGTAACAGATCTAAGTG+AGG + Chr1:99023260-99023279 None:intergenic 40.0%
CTGATGTGCCATAATAGGAT+TGG + Chr1:99024760-99024779 None:intergenic 40.0%
CTGTTGAGGTCATCTGAATT+TGG + Chr1:99029070-99029089 None:intergenic 40.0%
CTTCATTAGGCTTATCTGTC+CGG - Chr1:99029446-99029465 MsG0180006027.01.T01:five_prime_UTR 40.0%
CTTCCCTCCAGTTACATTAT+TGG - Chr1:99029178-99029197 MsG0180006027.01.T01:CDS 40.0%
CTTTCATCAGTAAGCACAAC+AGG + Chr1:99029352-99029371 None:intergenic 40.0%
GAAAGAAAGAATATCGACGG+CGG + Chr1:99025483-99025502 None:intergenic 40.0%
GAAGATTCCAGAGCTGTTTA+AGG - Chr1:99024178-99024197 MsG0180006027.01.T01:intron 40.0%
GAATGATACATCCCATAGGT+AGG - Chr1:99028173-99028192 MsG0180006027.01.T01:intron 40.0%
GACATAGGAAACTCCAGTTA+TGG + Chr1:99028789-99028808 None:intergenic 40.0%
GAGAAAGAGAAGATTGGTGA+TGG + Chr1:99025541-99025560 None:intergenic 40.0%
GAGAAGAGAATCCATCCAAA+TGG - Chr1:99023034-99023053 MsG0180006027.01.T01:three_prime_UTR 40.0%
GAGAGTGAGAAAGAGAAGAT+TGG + Chr1:99025547-99025566 None:intergenic 40.0%
GATCTAAATCAAACAGGTCC+TGG - Chr1:99024669-99024688 MsG0180006027.01.T01:intron 40.0%
GATTCACTGCAGTTAGTGAA+AGG + Chr1:99026076-99026095 None:intergenic 40.0%
GCCAAAGAGGATACTGAAAA+TGG - Chr1:99028041-99028060 MsG0180006027.01.T01:intron 40.0%
GCGTACAATACACCAATTGA+CGG - Chr1:99025126-99025145 MsG0180006027.01.T01:intron 40.0%
GCTCTTCTCAACAGTGAAAA+TGG - Chr1:99029376-99029395 MsG0180006027.01.T01:exon 40.0%
GCTTCCCAAATAAGGTACAT+GGG - Chr1:99029399-99029418 MsG0180006027.01.T01:five_prime_UTR 40.0%
GGGATTTGTGAAGTGGAAAA+TGG - Chr1:99026727-99026746 MsG0180006027.01.T01:intron 40.0%
GTACATGGGAAATATTCCCA+TGG - Chr1:99029413-99029432 MsG0180006027.01.T01:five_prime_UTR 40.0%
GTAGCTTATACGTTTGATGC+AGG - Chr1:99028968-99028987 MsG0180006027.01.T01:intron 40.0%
GTAGGAAATTTCTCTTTCCG+GGG - Chr1:99024155-99024174 MsG0180006027.01.T01:intron 40.0%
GTATGCAGAAGGTTTATTCC+TGG - Chr1:99028380-99028399 MsG0180006027.01.T01:CDS 40.0%
GTCACCAATAATGTAACTGG+AGG + Chr1:99029185-99029204 None:intergenic 40.0%
GTCCAGGAAAAACTTCTACA+TGG + Chr1:99026208-99026227 None:intergenic 40.0%
GTGCTTGTCGTAGCTTATTT+GGG - Chr1:99026705-99026724 MsG0180006027.01.T01:intron 40.0%
TAAGATGCTTGAAAGTAGGG+AGG + Chr1:99027819-99027838 None:intergenic 40.0%
TACAACAGGCTTCCTTGAAA+GGG + Chr1:99029504-99029523 None:intergenic 40.0%
TACTTTATATGCACCAGACC+AGG - Chr1:99029319-99029338 MsG0180006027.01.T01:CDS 40.0%
TAGGAAATTTCTCTTTCCGG+GGG - Chr1:99024156-99024175 MsG0180006027.01.T01:intron 40.0%
TATTTGGGGGATTTGTGAAG+TGG - Chr1:99026720-99026739 MsG0180006027.01.T01:intron 40.0%
TGAATCCACAATGGTGAGAA+CGG + Chr1:99025437-99025456 None:intergenic 40.0%
TGAGGTCATCTGAATTTGGA+GGG + Chr1:99029066-99029085 None:intergenic 40.0%
TGCAAAATCACGGTTTCGAA+TGG + Chr1:99028073-99028092 None:intergenic 40.0%
TGCATGAAACTGGTTGCTAT+CGG + Chr1:99028118-99028137 None:intergenic 40.0%
TGCTTGTCGTAGCTTATTTG+GGG - Chr1:99026706-99026725 MsG0180006027.01.T01:intron 40.0%
TTAAGATCACCAAGGAGGAT+TGG - Chr1:99024247-99024266 MsG0180006027.01.T01:intron 40.0%
TTCTATGACTGCAGCTAATC+TGG + Chr1:99025265-99025284 None:intergenic 40.0%
TTGAGGTCATCTGAATTTGG+AGG + Chr1:99029067-99029086 None:intergenic 40.0%
TTGATCACAGCAATGTTGGT+TGG + Chr1:99023358-99023377 None:intergenic 40.0%
! ACTTGCAAGGTGTTATGACT+TGG - Chr1:99026607-99026626 MsG0180006027.01.T01:intron 40.0%
! CGGTTCTAATTGCACGTAAT+AGG - Chr1:99028999-99029018 MsG0180006027.01.T01:intron 40.0%
! GAAAATGGGCTTCCCAAATA+AGG - Chr1:99029391-99029410 MsG0180006027.01.T01:five_prime_UTR 40.0%
! GAATGGAAGTGATAGTCTTG+CGG - Chr1:99026840-99026859 MsG0180006027.01.T01:intron 40.0%
! GAGAGTCGACTTCAAATCAA+AGG + Chr1:99027156-99027175 None:intergenic 40.0%
! GCGCAGAATGAAAAGGTTTT+AGG + Chr1:99027782-99027801 None:intergenic 40.0%
! GCTTTTACAGCATAGAGCAA+AGG - Chr1:99027620-99027639 MsG0180006027.01.T01:intron 40.0%
! TCCATCACAAAAGTACAAGG+GGG - Chr1:99029288-99029307 MsG0180006027.01.T01:CDS 40.0%
! TCTTTAATTTCTGGAGGTGG+TGG + Chr1:99029262-99029281 None:intergenic 40.0%
! TGAAGTCGATTTCCTGAGTT+TGG + Chr1:99024860-99024879 None:intergenic 40.0%
! TGTTTTGCAGTTTATGCCCT+GGG - Chr1:99026508-99026527 MsG0180006027.01.T01:intron 40.0%
!! AAAGAGAAGATTGGTGATGG+CGG + Chr1:99025538-99025557 None:intergenic 40.0%
!! CAAGGTGTTATGACTTGGTT+TGG - Chr1:99026612-99026631 MsG0180006027.01.T01:intron 40.0%
!! TACATGGCGGAGTATTGAAT+TGG + Chr1:99026192-99026211 None:intergenic 40.0%
!! TTACACAAGAGGCTGTTTTC+AGG + Chr1:99025090-99025109 None:intergenic 40.0%
!! TTCGTTTTGTCGGTTAGTGT+AGG - Chr1:99024137-99024156 MsG0180006027.01.T01:intron 40.0%
!! TTGGCCTTGGATAATAAAGG+GGG - Chr1:99025007-99025026 MsG0180006027.01.T01:intron 40.0%
!!! AACTTCTAGTTTTGACGTGC+AGG - Chr1:99028946-99028965 MsG0180006027.01.T01:intron 40.0%
!!! AAGGTTTTAGGAAAAGAGGG+AGG + Chr1:99027770-99027789 None:intergenic 40.0%
!!! AGGTTTTAGGAAAAGAGGGA+GGG + Chr1:99027769-99027788 None:intergenic 40.0%
!!! CCGTGATTTTGTTTTCTTGG+TGG + Chr1:99024960-99024979 None:intergenic 40.0%
!!! TGCCCGTGATTTTGTTTTCT+TGG + Chr1:99024963-99024982 None:intergenic 40.0%
!!! TTTTGTTTTCTTGGTGGACC+TGG + Chr1:99024954-99024973 None:intergenic 40.0%
AAACTGGTTGCTATCGGTAC+AGG + Chr1:99028112-99028131 None:intergenic 45.0%
AACAGTATCACGCATTCCTG+AGG + Chr1:99027589-99027608 None:intergenic 45.0%
AAGCAGCAGTAGAACGAAGA+AGG - Chr1:99023150-99023169 MsG0180006027.01.T01:three_prime_UTR 45.0%
AATCGGTGGCCATTTGTTTC+GGG - Chr1:99025779-99025798 MsG0180006027.01.T01:intron 45.0%
AATCTAGCACAGCTGCCATT+TGG + Chr1:99027384-99027403 None:intergenic 45.0%
AATGGTGAGAACGGTGAAGA+AGG + Chr1:99025428-99025447 None:intergenic 45.0%
AGCAGCAGTAGAACGAAGAA+GGG - Chr1:99023151-99023170 MsG0180006027.01.T01:three_prime_UTR 45.0%
AGTTGTGGTGCAAAGATGAG+CGG + Chr1:99023449-99023468 None:intergenic 45.0%
ATGTGTCTGTGCTTCATTGC+TGG - Chr1:99023839-99023858 MsG0180006027.01.T01:intron 45.0%
ATTTCCAGACACCAGAAGTC+TGG + Chr1:99025940-99025959 None:intergenic 45.0%
CAAGATCGTATGTGGCTCAA+TGG - Chr1:99023496-99023515 MsG0180006027.01.T01:intron 45.0%
CAGACACACAACACTAACAC+TGG + Chr1:99023809-99023828 None:intergenic 45.0%
CAGTGACGATAGATTTCCAG+TGG - Chr1:99024981-99025000 MsG0180006027.01.T01:intron 45.0%
CAGTGTTAGTGTTGTGTGTC+TGG - Chr1:99023807-99023826 MsG0180006027.01.T01:intron 45.0%
CCAGACAAACTGCATGAAAC+TGG + Chr1:99028128-99028147 None:intergenic 45.0%
CCAGTTTCATGCAGTTTGTC+TGG - Chr1:99028125-99028144 MsG0180006027.01.T01:intron 45.0%
CCGTGTATTAGATTGGATGG+TGG - Chr1:99026025-99026044 MsG0180006027.01.T01:intron 45.0%
CGTGCAATTAGAACCGCATT+TGG + Chr1:99028995-99029014 None:intergenic 45.0%
GAATCGGTGGCCATTTGTTT+CGG - Chr1:99025778-99025797 MsG0180006027.01.T01:intron 45.0%
GCAAAAGATGCTGGGATCAA+TGG - Chr1:99029214-99029233 MsG0180006027.01.T01:CDS 45.0%
GCTTGTCGTAGCTTATTTGG+GGG - Chr1:99026707-99026726 MsG0180006027.01.T01:intron 45.0%
GGCTTCCCAAATAAGGTACA+TGG - Chr1:99029398-99029417 MsG0180006027.01.T01:five_prime_UTR 45.0%
GGGTATTAAGATCACCAAGG+AGG - Chr1:99024242-99024261 MsG0180006027.01.T01:intron 45.0%
GTACAACAGGCTTCCTTGAA+AGG + Chr1:99029505-99029524 None:intergenic 45.0%
GTCAGTATTAGTGTCGTGTC+TGG - Chr1:99023942-99023961 MsG0180006027.01.T01:intron 45.0%
GTCTAACTGCAGTGACTGTA+GGG + Chr1:99025288-99025307 None:intergenic 45.0%
GTTGTTGTCATGTGACTGGA+AGG - Chr1:99025050-99025069 MsG0180006027.01.T01:intron 45.0%
TATATGCACCAGACCAGGAA+GGG - Chr1:99029324-99029343 MsG0180006027.01.T01:CDS 45.0%
TATCCAAGGCCAATATCCAC+TGG + Chr1:99025000-99025019 None:intergenic 45.0%
TCACAGAACTGGAGATCACA+TGG + Chr1:99028589-99028608 None:intergenic 45.0%
TCAGTGCTAGTGTTAGTGTC+TGG - Chr1:99023668-99023687 MsG0180006027.01.T01:CDS 45.0%
TCTGGCTGATGTGCCATAAT+AGG + Chr1:99024765-99024784 None:intergenic 45.0%
TGCTGGGATCAATGGAATAG+AGG - Chr1:99029222-99029241 MsG0180006027.01.T01:CDS 45.0%
TGTCTAACTGCAGTGACTGT+AGG + Chr1:99025289-99025308 None:intergenic 45.0%
TTATATGCACCAGACCAGGA+AGG - Chr1:99029323-99029342 MsG0180006027.01.T01:CDS 45.0%
TTGGCCTCAATTGCGTTGTA+TGG - Chr1:99025224-99025243 MsG0180006027.01.T01:intron 45.0%
! ATAATGTGGGCTGCATTGCA+TGG - Chr1:99024595-99024614 MsG0180006027.01.T01:CDS 45.0%
! CAATTTGCTCCAATCCTCCT+TGG + Chr1:99024259-99024278 None:intergenic 45.0%
! CGCCATGTAGAAGTTTTTCC+TGG - Chr1:99026203-99026222 MsG0180006027.01.T01:intron 45.0%
! CTGTTTTGCAGTTTATGCCC+TGG - Chr1:99026507-99026526 MsG0180006027.01.T01:intron 45.0%
! GACATTCATTAGCTTCCCCA+GGG + Chr1:99026527-99026546 None:intergenic 45.0%
! GCTGCCCTTTTTATTGGACT+CGG - Chr1:99025194-99025213 MsG0180006027.01.T01:intron 45.0%
! GTTTTGCAGTTTATGCCCTG+GGG - Chr1:99026509-99026528 MsG0180006027.01.T01:intron 45.0%
! TAATGTGGGCTGCATTGCAT+GGG - Chr1:99024596-99024615 MsG0180006027.01.T01:CDS 45.0%
! TCCCCCTTGTACTTTTGTGA+TGG + Chr1:99029292-99029311 None:intergenic 45.0%
! TGACATTCATTAGCTTCCCC+AGG + Chr1:99026528-99026547 None:intergenic 45.0%
! TGGCCTTGGATAATAAAGGG+GGG - Chr1:99025008-99025027 MsG0180006027.01.T01:intron 45.0%
! TGTTTCGGGTACATAATCGG+TGG - Chr1:99025793-99025812 MsG0180006027.01.T01:CDS 45.0%
! TTTCCAGTGGATATTGGCCT+TGG - Chr1:99024994-99025013 MsG0180006027.01.T01:intron 45.0%
! TTTGAAGTCGACTCTCTCAC+TGG - Chr1:99027160-99027179 MsG0180006027.01.T01:intron 45.0%
!!! GGTTTTAGGAAAAGAGGGAG+GGG + Chr1:99027768-99027787 None:intergenic 45.0%
!!! GTTTTAGGAAAAGAGGGAGG+GGG + Chr1:99027767-99027786 None:intergenic 45.0%
AAGAAGGTCAGGGGAAAACG+TGG + Chr1:99025412-99025431 None:intergenic 50.0%
AAGGAAACTAGCAGCACCTC+AGG - Chr1:99027570-99027589 MsG0180006027.01.T01:intron 50.0%
ACCTTGCAATAGCAGACAGC+TGG + Chr1:99026564-99026583 None:intergenic 50.0%
ACTAAAGCTCCCGCATAAGC+AGG + Chr1:99025167-99025186 None:intergenic 50.0%
AGAACGGTGAAGAAGGTCAG+GGG + Chr1:99025421-99025440 None:intergenic 50.0%
AGAAGGTCAGGGGAAAACGT+GGG + Chr1:99025411-99025430 None:intergenic 50.0%
AGTTCCAGACTTCTGGTGTC+TGG - Chr1:99025933-99025952 MsG0180006027.01.T01:intron 50.0%
ATATGCACCAGACCAGGAAG+GGG - Chr1:99029325-99029344 MsG0180006027.01.T01:CDS 50.0%
CCTGTGGAGCTTCTTCTGAA+CGG + Chr1:99028332-99028351 None:intergenic 50.0%
CTAAAGCTCCCGCATAAGCA+GGG + Chr1:99025166-99025185 None:intergenic 50.0%
CTTCACCGTTCTCACCATTG+TGG - Chr1:99025429-99025448 MsG0180006027.01.T01:intron 50.0%
GAGAACGGTGAAGAAGGTCA+GGG + Chr1:99025422-99025441 None:intergenic 50.0%
GCAGCAGTAGAACGAAGAAG+GGG - Chr1:99023152-99023171 MsG0180006027.01.T01:three_prime_UTR 50.0%
GCGCAGAGAGACATATTTCG+TGG + Chr1:99024063-99024082 None:intergenic 50.0%
GCTTGAAAGTAGGGAGGTCT+TGG + Chr1:99027813-99027832 None:intergenic 50.0%
GGATCTCCCTTAAACAGCTC+TGG + Chr1:99024188-99024207 None:intergenic 50.0%
GGCCTTGGATAATAAAGGGG+GGG - Chr1:99025009-99025028 MsG0180006027.01.T01:intron 50.0%
GTCCAATAAAAAGGGCAGCC+TGG + Chr1:99025193-99025212 None:intergenic 50.0%
GTGTAGCAGTTCCAGACTTC+TGG - Chr1:99025926-99025945 MsG0180006027.01.T01:intron 50.0%
GTTGTGGTGCAAAGATGAGC+GGG + Chr1:99023448-99023467 None:intergenic 50.0%
GTTTGATGCAGGGCCAAATG+CGG - Chr1:99028979-99028998 MsG0180006027.01.T01:intron 50.0%
TCATGTGACTGGAAGGTCAC+AGG - Chr1:99025057-99025076 MsG0180006027.01.T01:CDS 50.0%
TCGTATGTGGCTCAATGGCA+AGG - Chr1:99023501-99023520 MsG0180006027.01.T01:intron 50.0%
TGAGAACGGTGAAGAAGGTC+AGG + Chr1:99025423-99025442 None:intergenic 50.0%
TGCAGTGGGGAAGTTGTTGT+AGG + Chr1:99024298-99024317 None:intergenic 50.0%
! CACCAGGCTGCCCTTTTTAT+TGG - Chr1:99025188-99025207 MsG0180006027.01.T01:intron 50.0%
! CTAGGTTAGCTCTCGGCAAA+AGG - Chr1:99027551-99027570 MsG0180006027.01.T01:intron 50.0%
! TGGAGGGAAGAGAGTTTTGC+AGG + Chr1:99029168-99029187 None:intergenic 50.0%
!! GGAAATGGCGGGTGATAGTT+GGG - Chr1:99023309-99023328 MsG0180006027.01.T01:CDS 50.0%
!! GGGTGATAGTTGGGTACTGA+TGG - Chr1:99023318-99023337 MsG0180006027.01.T01:CDS 50.0%
!! TGGAAATGGCGGGTGATAGT+TGG - Chr1:99023308-99023327 MsG0180006027.01.T01:CDS 50.0%
!! TGGATTGGCTTCATCAGCTG+CGG - Chr1:99024320-99024339 MsG0180006027.01.T01:intron 50.0%
AACAACTTCCCCACTGCAGC+TGG - Chr1:99024300-99024319 MsG0180006027.01.T01:intron 55.0%
AAGCCAATCCAGCTGCAGTG+GGG + Chr1:99024311-99024330 None:intergenic 55.0%
AGCCAACGCCAGACAGATGA+CGG + Chr1:99025582-99025601 None:intergenic 55.0%
CATAAGCAGGGTTCGGGAAG+GGG + Chr1:99025154-99025173 None:intergenic 55.0%
CCGTTCAGAAGAAGCTCCAC+AGG - Chr1:99028329-99028348 MsG0180006027.01.T01:intron 55.0%
CGACTCTCTCACTGGAAGTG+CGG - Chr1:99027168-99027187 MsG0180006027.01.T01:intron 55.0%
CTGGAACTGCTACACTGTGC+TGG + Chr1:99025921-99025940 None:intergenic 55.0%
CTTCCCGAACCCTGCTTATG+CGG - Chr1:99025154-99025173 MsG0180006027.01.T01:intron 55.0%
GAAGCCAATCCAGCTGCAGT+GGG + Chr1:99024312-99024331 None:intergenic 55.0%
GCATAAGCAGGGTTCGGGAA+GGG + Chr1:99025155-99025174 None:intergenic 55.0%
GCCAGCTGTCTGCTATTGCA+AGG - Chr1:99026560-99026579 MsG0180006027.01.T01:intron 55.0%
GGATAATAAAGGGGGGGCCT+TGG - Chr1:99025015-99025034 MsG0180006027.01.T01:intron 55.0%
GGCCCCCCCTTTATTATCCA+AGG + Chr1:99025014-99025033 None:intergenic 55.0%
TGAAGCCAATCCAGCTGCAG+TGG + Chr1:99024313-99024332 None:intergenic 55.0%
TTCCCGAACCCTGCTTATGC+GGG - Chr1:99025155-99025174 MsG0180006027.01.T01:intron 55.0%
!! ACAGCTCTGGAATCTTCCCC+CGG + Chr1:99024175-99024194 None:intergenic 55.0%
!! GGATTGGCTTCATCAGCTGC+GGG - Chr1:99024321-99024340 MsG0180006027.01.T01:intron 55.0%
AAAAGAGGGAGGGGGAGAGG+TGG + Chr1:99027759-99027778 None:intergenic 60.0%
AACAGGTCCCCTTCCTGGTC+TGG + Chr1:99029335-99029354 None:intergenic 60.0%
AGCACAACAGGTCCCCTTCC+TGG + Chr1:99029340-99029359 None:intergenic 60.0%
AGGAAAAGAGGGAGGGGGAG+AGG + Chr1:99027762-99027781 None:intergenic 60.0%
CAACATCACACGCGCGAGCA+CGG + Chr1:99024209-99024228 None:intergenic 60.0%
CGCATAAGCAGGGTTCGGGA+AGG + Chr1:99025156-99025175 None:intergenic 60.0%
CTCCCGCATAAGCAGGGTTC+GGG + Chr1:99025160-99025179 None:intergenic 60.0%
CTTCCCCACTGCAGCTGGAT+TGG - Chr1:99024305-99024324 MsG0180006027.01.T01:intron 60.0%
GCTCCCGCATAAGCAGGGTT+CGG + Chr1:99025161-99025180 None:intergenic 60.0%
GCTGCGGGTTTCGCTTGTCT+TGG - Chr1:99024336-99024355 MsG0180006027.01.T01:intron 60.0%
TCTCCCTGCCGTCATCTGTC+TGG - Chr1:99025571-99025590 MsG0180006027.01.T01:intron 60.0%
TGCCGTCATCTGTCTGGCGT+TGG - Chr1:99025577-99025596 MsG0180006027.01.T01:intron 60.0%
TGCTCGCGCGTGTGATGTTG+AGG - Chr1:99024209-99024228 MsG0180006027.01.T01:intron 60.0%
! AACGCCAGACAGATGACGGC+AGG + Chr1:99025578-99025597 None:intergenic 60.0%
! ACGCCAGACAGATGACGGCA+GGG + Chr1:99025577-99025596 None:intergenic 60.0%
! TGCGGGAGCTTTAGTGCACC+AGG - Chr1:99025172-99025191 MsG0180006027.01.T01:intron 60.0%
!! CATCTGTCTGGCGTTGGCTG+CGG - Chr1:99025583-99025602 MsG0180006027.01.T01:intron 60.0%
CGGGAAGGGGTCCCGTCAAT+TGG + Chr1:99025141-99025160 None:intergenic 65.0%
! AAGGGGGGGCCTTGGTGCAA+AGG - Chr1:99025023-99025042 MsG0180006027.01.T01:intron 65.0%
!! CTGGCGTTGGCTGCGGACAC+CGG - Chr1:99025590-99025609 MsG0180006027.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 99022997 99029699 99022997 ID=MsG0180006027.01;Name=MsG0180006027.01
Chr1 mRNA 99022997 99029699 99022997 ID=MsG0180006027.01.T01;Parent=MsG0180006027.01;Name=MsG0180006027.01.T01;_AED=0.44;_eAED=0.44;_QI=241|1|1|1|0.9|0.81|11|288|418
Chr1 exon 99022997 99023507 99022997 ID=MsG0180006027.01.T01:exon:51045;Parent=MsG0180006027.01.T01
Chr1 exon 99023607 99023728 99023607 ID=MsG0180006027.01.T01:exon:51044;Parent=MsG0180006027.01.T01
Chr1 exon 99024346 99024394 99024346 ID=MsG0180006027.01.T01:exon:51043;Parent=MsG0180006027.01.T01
Chr1 exon 99024506 99024663 99024506 ID=MsG0180006027.01.T01:exon:51042;Parent=MsG0180006027.01.T01
Chr1 exon 99025055 99025141 99025055 ID=MsG0180006027.01.T01:exon:51041;Parent=MsG0180006027.01.T01
Chr1 exon 99025781 99025861 99025781 ID=MsG0180006027.01.T01:exon:51040;Parent=MsG0180006027.01.T01
Chr1 exon 99025942 99026005 99025942 ID=MsG0180006027.01.T01:exon:51039;Parent=MsG0180006027.01.T01
Chr1 exon 99026115 99026178 99026115 ID=MsG0180006027.01.T01:exon:51038;Parent=MsG0180006027.01.T01
Chr1 exon 99028339 99028537 99028339 ID=MsG0180006027.01.T01:exon:51037;Parent=MsG0180006027.01.T01
Chr1 exon 99029174 99029549 99029174 ID=MsG0180006027.01.T01:exon:51036;Parent=MsG0180006027.01.T01
Chr1 exon 99029625 99029699 99029625 ID=MsG0180006027.01.T01:exon:51035;Parent=MsG0180006027.01.T01
Chr1 five_prime_UTR 99029625 99029699 99029625 ID=MsG0180006027.01.T01:five_prime_utr;Parent=MsG0180006027.01.T01
Chr1 five_prime_UTR 99029384 99029549 99029384 ID=MsG0180006027.01.T01:five_prime_utr;Parent=MsG0180006027.01.T01
Chr1 CDS 99029174 99029383 99029174 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 CDS 99028339 99028537 99028339 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 CDS 99026115 99026178 99026115 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 CDS 99025942 99026005 99025942 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 CDS 99025781 99025861 99025781 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 CDS 99025055 99025141 99025055 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 CDS 99024506 99024663 99024506 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 CDS 99024346 99024394 99024346 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 CDS 99023607 99023728 99023607 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 CDS 99023285 99023507 99023285 ID=MsG0180006027.01.T01:cds;Parent=MsG0180006027.01.T01
Chr1 three_prime_UTR 99022997 99023284 99022997 ID=MsG0180006027.01.T01:three_prime_utr;Parent=MsG0180006027.01.T01
Gene Sequence

>MsG0180006027.01.T01

ATGGCGGGTGATAGTTGGGTACTGATGGTTACTGCTCAGACACCAACCAACATTGCTGTGATCAAGTATTGGGGTAAGAGAGATGAAACCCTAATCTTACCTGTTAATGATAGTATCAGTGTCACTCTTGATCCCGCTCATCTTTGCACCACAACTACCGTTTCTGTTAGTCCTTCCTTTCAACAAGATCGTATGTGGCTCAATGGCAAGGAAATTTCTCTTTCCGGGGGAAGATTCCAGAGCTGTTTAAGGGAGATCCGTGCTCGCGCGTGTGATGTTGAGGATAATAAAAAGGGTATTAAGATCACCAAGGAGGATTGGAGCAAATTGAACGTACATATTGCTTCCTACAACAACTTCCCCACTGCAGCTGGATTGGCTTCATCAGCTGCGGGTTTCGCTTGTCTTGTTTATGCCCTGGGGAAGCTAATGAATGTCAAAGAAGATGAAAGCCAGCTGTCTGCTATTGCAAGGCAAGGATCAGGTAGTGCTTGTCGTAGCTTATTTGGGGGATTTGTGAAGTGGAAAATGGGAAAAGAGGAGAATGGAAGTGATAGTCTTGCGGTTCAACTTGCTGATGAAAAGCATTGGGATGAACTTGTTATTGTTATTGCTGTGGTTAGCTCTCGGCAAAAGGAAACTAGCAGCACCTCAGGAATGCGTGATACTGTTGAAACAAGTTTGCTTTTACAGCATAGAGCAAAGGAAATAGTGCCAAAGAGGATACTGAAAATGGAAGAAGCCATTCGAAACCGTGATTTTGCATCTTTTTCACAACTCACCTGTACCGATAGCAACCAGTTTCATGCAGTTTGTCTGGATACAAGTCCCCCTATATTTTACATGAATGATACATCCCATAGGATAATCAGCATTGTTGACAAGTGGAACCGTTCAGAAGAAGCTCCACAGGTAGCTTATACGTTTGATGCAGGGCCAAATGCGGTTCTAATTGCACGTAATAGGAAAGCTGCAACCCTTTTGATTCAGAAGTTGCTTTACTACTTCCCTCCAAATTCAGATGACCTCAACAGTTACATTATTGGTGACAAGTCAATTGCAAAAGATGCTGGGATCAATGGAATAGAGGACATAGAAGCTTTGCCACCACCTCCAGAAATTAAAGACAATATTCCATCACAAAAGTACAAGGGGGATGTCAGTTACTTTATATGCACCAGACCAGGAAGGGGACCTGTTGTGCTTACTGATGAAAGTCAAGCTCTTCTCAACAGTGAAAATGGGCTTCCCAAATAA
Protein sequence

>MsG0180006027.01.T01

MAGDSWVLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPAHLCTTTTVSVSPSFQQDRMWLNGKEISLSGGRFQSCLREIRARACDVEDNKKGIKITKEDWSKLNVHIASYNNFPTAAGLASSAAGFACLVYALGKLMNVKEDESQLSAIARQGSGSACRSLFGGFVKWKMGKEENGSDSLAVQLADEKHWDELVIVIAVVSSRQKETSSTSGMRDTVETSLLLQHRAKEIVPKRILKMEEAIRNRDFASFSQLTCTDSNQFHAVCLDTSPPIFYMNDTSHRIISIVDKWNRSEEAPQVAYTFDAGPNAVLIARNRKAATLLIQKLLYYFPPNSDDLNSYIIGDKSIAKDAGINGIEDIEALPPPPEIKDNIPSQKYKGDVSYFICTRPGRGPVVLTDESQALLNSENGLPK*