AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007584.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007584.01.T01 MTR_2g028180 94.207 328 16 2 1 327 1 326 0.0 621
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 68 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGATATTGTTAATAGAATT+TGG 0.155822 2:-17595908 MsG0280007584.01.T01:CDS
TCTTATGTCACACCAAAATT+TGG 0.165310 2:-17595266 MsG0280007584.01.T01:CDS
GAAGAATAGCTTCCAAATTT+TGG 0.185043 2:+17595254 None:intergenic
TCAATAACTTCAGAACTTTC+AGG 0.215550 2:+17596143 None:intergenic
TTGAGATCTAAGAGTGATTT+AGG 0.220206 2:-17595963 MsG0280007584.01.T01:CDS
ATCTTTGATTTCTCTCTTCA+TGG 0.238406 2:+17596321 None:intergenic
CTAAGAGTGATTTAGGTAAT+AGG 0.283769 2:-17595956 MsG0280007584.01.T01:CDS
CTACATTTGATGGAACTCTA+AGG 0.296653 2:+17595351 None:intergenic
GCTATTCTTCAATGAACATT+AGG 0.319389 2:-17595241 MsG0280007584.01.T01:CDS
CTCAGGAAAATGCCAACTTT+TGG 0.338664 2:+17596043 None:intergenic
GCTCTTAGAATGCTGTTTGT+TGG 0.357566 2:+17596202 None:intergenic
TGATGTCTCAGTAATCAAAA+TGG 0.367230 2:-17595832 MsG0280007584.01.T01:CDS
TATTGTTGACTCTCTTAATC+AGG 0.372973 2:-17596018 MsG0280007584.01.T01:CDS
GATGGAGATTCTACATTTGA+TGG 0.375858 2:+17595341 None:intergenic
ATTCCAGCTAATGTTGTTGA+TGG 0.381283 2:+17596107 None:intergenic
TTCCAACACCACTTCAAAAC+TGG 0.382459 2:-17596174 MsG0280007584.01.T01:CDS
AGCTAACGGGATTCCATTGT+TGG 0.386476 2:-17596288 MsG0280007584.01.T01:CDS
CAAAATGGACCTTCAGGATC+AGG 0.416806 2:-17595817 MsG0280007584.01.T01:intron
CTAAATTATGCTATATCATC+AGG 0.421773 2:-17597022 MsG0280007584.01.T01:intron
TGAAGTTATTGATGAAAAGT+TGG 0.428046 2:-17596132 MsG0280007584.01.T01:CDS
TCATTCTTGTTTAAGCCCAC+TGG 0.428904 2:+17595452 None:intergenic
GCAGGTGTGGACTTGAGGTT+TGG 0.429476 2:-17596764 MsG0280007584.01.T01:intron
AGTAATCAAAATGGACCTTC+AGG 0.437282 2:-17595823 MsG0280007584.01.T01:CDS
CCATTCTCTAAGACTATCAA+TGG 0.446678 2:+17595319 None:intergenic
TTGAGAATGATCACAAGAAT+AGG 0.452576 2:-17596067 MsG0280007584.01.T01:CDS
GAACCATCAACAACATTAGC+TGG 0.455433 2:-17596110 MsG0280007584.01.T01:CDS
TGAGGTTTGGCATCAACTAC+TGG 0.464028 2:-17596751 MsG0280007584.01.T01:intron
ATTTAGTAACTCATGTAACT+AGG 0.497774 2:+17597039 None:intergenic
GACTAAACAATATATTGTGT+TGG 0.498646 2:+17597094 None:intergenic
TGCAGACAAGAGCAAGGTAC+TGG 0.503899 2:+17596240 None:intergenic
CCATTGATAGTCTTAGAGAA+TGG 0.509108 2:-17595319 MsG0280007584.01.T01:CDS
GATCAATGAGAAAAGCTAAC+GGG 0.510168 2:-17596301 MsG0280007584.01.T01:CDS
TTCTATATTTAGCCCAGAGT+TGG 0.513249 2:-17595195 MsG0280007584.01.T01:CDS
TACATTTGATGGAACTCTAA+GGG 0.514922 2:+17595352 None:intergenic
GGATTCTAGTCTATTTGCTA+TGG 0.519544 2:+17595373 None:intergenic
TCAAAGGCAGATACCAACTC+TGG 0.523872 2:+17595182 None:intergenic
GCAGATGGAATATACTCTCC+TGG 0.523914 2:-17595290 MsG0280007584.01.T01:CDS
GGAGAGTATATTCCATCTGC+AGG 0.527681 2:+17595293 None:intergenic
GTGGAAGAAGAAATTGATGA+AGG 0.527841 2:-17595098 MsG0280007584.01.T01:CDS
ACAACATTAGCTGGAATACA+AGG 0.535364 2:-17596101 MsG0280007584.01.T01:CDS
GAAACAAATTCTAGAGAATG+TGG 0.538120 2:-17595117 MsG0280007584.01.T01:CDS
TGTTCTATAAATACTTACCA+TGG 0.545530 2:-17596387 MsG0280007584.01.T01:exon
AGAGAGTCAACAATATGCTC+AGG 0.545794 2:+17596026 None:intergenic
TTTGGTGTGACATAAGATCC+AGG 0.546990 2:+17595272 None:intergenic
GTTCTATAAATACTTACCAT+GGG 0.548026 2:-17596386 MsG0280007584.01.T01:exon
ACAAGAATAGGTCCAAAAGT+TGG 0.549690 2:-17596055 MsG0280007584.01.T01:CDS
TATGCAAAAGCTTGAAGCAG+AGG 0.550122 2:-17595153 MsG0280007584.01.T01:CDS
TAAAACAAGAATGCTTGAGA+AGG 0.557479 2:-17595411 MsG0280007584.01.T01:CDS
AGAGAATGGCTTCCTGCAGA+TGG 0.557742 2:-17595305 MsG0280007584.01.T01:CDS
TTTAGTAACTCATGTAACTA+GGG 0.560915 2:+17597040 None:intergenic
ATGATTAGATCTTCCAACAA+TGG 0.577290 2:+17596275 None:intergenic
AGCAAGGTACTGGTCACTAG+TGG 0.582012 2:+17596250 None:intergenic
TCTCTAAGACTATCAATGGA+TGG 0.587245 2:+17595323 None:intergenic
AAAACAAGAATGCTTGAGAA+GGG 0.588771 2:-17595410 MsG0280007584.01.T01:CDS
TGAGAAGGGAAATAAGAGAA+AGG 0.591498 2:-17595396 MsG0280007584.01.T01:CDS
CAAAGGCAGATACCAACTCT+GGG 0.607677 2:+17595183 None:intergenic
AGATCAATGAGAAAAGCTAA+CGG 0.614066 2:-17596302 MsG0280007584.01.T01:CDS
ATCAAGAAAATGCAACCAGT+GGG 0.620393 2:-17595467 MsG0280007584.01.T01:CDS
CTTAAACAAGAATGAGGAGA+GGG 0.621377 2:-17595444 MsG0280007584.01.T01:CDS
AGTGGGCTTAAACAAGAATG+AGG 0.624260 2:-17595450 MsG0280007584.01.T01:CDS
GAATGCAAATGAATCTTGTG+AGG 0.631939 2:-17595219 MsG0280007584.01.T01:CDS
CATCAAGAAAATGCAACCAG+TGG 0.637452 2:-17595468 MsG0280007584.01.T01:CDS
ATTCAGATACCTGATCCTGA+AGG 0.645280 2:+17595808 None:intergenic
CATTAGCTGGAATACAAGGA+GGG 0.651187 2:-17596097 MsG0280007584.01.T01:CDS
TTGCTGTGCAGACAAGAGCA+AGG 0.655414 2:+17596234 None:intergenic
ACATTAGCTGGAATACAAGG+AGG 0.676350 2:-17596098 MsG0280007584.01.T01:CDS
TTCTATAAATACTTACCATG+GGG 0.676502 2:-17596385 MsG0280007584.01.T01:exon
GCTTAAACAAGAATGAGGAG+AGG 0.715396 2:-17595445 MsG0280007584.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTATTCATGTAAAAA+TGG + Chr2:17595397-17595416 None:intergenic 10.0%
!!! TTATTTTTTAAATTGGAAAT+AGG - Chr2:17596336-17596355 MsG0280007584.01.T01:CDS 10.0%
!! TTACATGAATAATAAATTTG+AGG - Chr2:17595400-17595419 MsG0280007584.01.T01:CDS 15.0%
!! ACGATATTGTTAATAGAATT+TGG - Chr2:17596196-17596215 MsG0280007584.01.T01:CDS 20.0%
!! AGGAAATATAAACAAAAACA+AGG + Chr2:17595672-17595691 None:intergenic 20.0%
!! AGTTTGAACTTATAATCTTA+AGG + Chr2:17596536-17596555 None:intergenic 20.0%
!! GTTTGAACTTATAATCTTAA+GGG + Chr2:17596535-17596554 None:intergenic 20.0%
!! TATTATTCATGTAAAAATGG+AGG + Chr2:17595394-17595413 None:intergenic 20.0%
!! TTACAATAGTATTCACAAAT+TGG + Chr2:17595611-17595630 None:intergenic 20.0%
!!! AAGTTAAACTCATACTTTTT+TGG - Chr2:17597069-17597088 MsG0280007584.01.T01:five_prime_UTR 20.0%
! ATTTAGTAACTCATGTAACT+AGG + Chr2:17595068-17595087 None:intergenic 25.0%
! CTAAATTATGCTATATCATC+AGG - Chr2:17595082-17595101 MsG0280007584.01.T01:exon 25.0%
! CTGTAATCATTATAAGACAT+AGG + Chr2:17595645-17595664 None:intergenic 25.0%
! GACTAAACAATATATTGTGT+TGG + Chr2:17595013-17595032 None:intergenic 25.0%
! GTTCTATAAATACTTACCAT+GGG - Chr2:17595718-17595737 MsG0280007584.01.T01:intron 25.0%
! TGAAGTTATTGATGAAAAGT+TGG - Chr2:17595972-17595991 MsG0280007584.01.T01:CDS 25.0%
! TGAGTATATAAGTGTAAGTT+TGG + Chr2:17595514-17595533 None:intergenic 25.0%
! TGTTCTATAAATACTTACCA+TGG - Chr2:17595717-17595736 MsG0280007584.01.T01:intron 25.0%
! TTCTATAAATACTTACCATG+GGG - Chr2:17595719-17595738 MsG0280007584.01.T01:intron 25.0%
! TTTAGTAACTCATGTAACTA+GGG + Chr2:17595067-17595086 None:intergenic 25.0%
! TTTAGTCTGAAAAAACTTCA+GGG - Chr2:17595026-17595045 MsG0280007584.01.T01:three_prime_UTR 25.0%
!! TTTGAAATTAACAAGATCCT+TGG + Chr2:17595577-17595596 None:intergenic 25.0%
!!! TGAGTTTAACTTTTTATGCA+TGG + Chr2:17597061-17597080 None:intergenic 25.0%
AAAACAAGAATGCTTGAGAA+GGG - Chr2:17596694-17596713 MsG0280007584.01.T01:intron 30.0%
AATGAGTATAACCGTGTTTA+CGG - Chr2:17596386-17596405 MsG0280007584.01.T01:exon 30.0%
ACAAAATTAGGATCAGAAGA+GGG + Chr2:17595313-17595332 None:intergenic 30.0%
AGATCAATGAGAAAAGCTAA+CGG - Chr2:17595802-17595821 MsG0280007584.01.T01:intron 30.0%
AGGTTAAAAACCAATTGTAG+AGG - Chr2:17595420-17595439 MsG0280007584.01.T01:CDS 30.0%
ATGATTAGATCTTCCAACAA+TGG + Chr2:17595832-17595851 None:intergenic 30.0%
CCTGCAAAAGATACAAAATT+AGG + Chr2:17595325-17595344 None:intergenic 30.0%
CTAAGAGTGATTTAGGTAAT+AGG - Chr2:17596148-17596167 MsG0280007584.01.T01:CDS 30.0%
GCTATTCTTCAATGAACATT+AGG - Chr2:17596863-17596882 MsG0280007584.01.T01:intron 30.0%
GTTTAGTCTGAAAAAACTTC+AGG - Chr2:17595025-17595044 MsG0280007584.01.T01:three_prime_UTR 30.0%
TAAAACAAGAATGCTTGAGA+AGG - Chr2:17596693-17596712 MsG0280007584.01.T01:intron 30.0%
TAATCTAACTCATCATACTC+AGG - Chr2:17596600-17596619 MsG0280007584.01.T01:intron 30.0%
TACAAAATTAGGATCAGAAG+AGG + Chr2:17595314-17595333 None:intergenic 30.0%
TACATTTGATGGAACTCTAA+GGG + Chr2:17596755-17596774 None:intergenic 30.0%
TCAATAACTTCAGAACTTTC+AGG + Chr2:17595964-17595983 None:intergenic 30.0%
TCTTATGTCACACCAAAATT+TGG - Chr2:17596838-17596857 MsG0280007584.01.T01:intron 30.0%
TGATGTCTCAGTAATCAAAA+TGG - Chr2:17596272-17596291 MsG0280007584.01.T01:CDS 30.0%
TTATGGCAATAAAAGCTTCA+TGG + Chr2:17595241-17595260 None:intergenic 30.0%
TTCATACCTTGAAGTTAACA+AGG - Chr2:17596431-17596450 MsG0280007584.01.T01:intron 30.0%
TTCATGTAAAAATGGAGGAT+TGG + Chr2:17595389-17595408 None:intergenic 30.0%
TTCATTGAATACCATAAAGC+AGG + Chr2:17595282-17595301 None:intergenic 30.0%
TTGAGAATGATCACAAGAAT+AGG - Chr2:17596037-17596056 MsG0280007584.01.T01:CDS 30.0%
TTGAGATCTAAGAGTGATTT+AGG - Chr2:17596141-17596160 MsG0280007584.01.T01:CDS 30.0%
! ACTACTGTACTTTATTTCCA+AGG - Chr2:17595557-17595576 MsG0280007584.01.T01:intron 30.0%
! ATCTTTGATTTCTCTCTTCA+TGG + Chr2:17595786-17595805 None:intergenic 30.0%
! CCTAATTTTGTATCTTTTGC+AGG - Chr2:17595322-17595341 MsG0280007584.01.T01:CDS 30.0%
! CTTTTATTGCCATAAGTCAA+AGG - Chr2:17595246-17595265 MsG0280007584.01.T01:CDS 30.0%
! GAAACAAATTCTAGAGAATG+TGG - Chr2:17596987-17597006 MsG0280007584.01.T01:intron 30.0%
! GAAGAATAGCTTCCAAATTT+TGG + Chr2:17596853-17596872 None:intergenic 30.0%
! TACTTATAGCCTTTGACTTA+TGG + Chr2:17595258-17595277 None:intergenic 30.0%
!! TATTGTTGACTCTCTTAATC+AGG - Chr2:17596086-17596105 MsG0280007584.01.T01:CDS 30.0%
!!! AGCATTCTTGTTTTATGACT+TGG + Chr2:17596688-17596707 None:intergenic 30.0%
ACAACATTAGCTGGAATACA+AGG - Chr2:17596003-17596022 MsG0280007584.01.T01:CDS 35.0%
ACAAGAATAGGTCCAAAAGT+TGG - Chr2:17596049-17596068 MsG0280007584.01.T01:CDS 35.0%
AGTAATCAAAATGGACCTTC+AGG - Chr2:17596281-17596300 MsG0280007584.01.T01:CDS 35.0%
ATCAAGAAAATGCAACCAGT+GGG - Chr2:17596637-17596656 MsG0280007584.01.T01:intron 35.0%
ATTCCAGCTAATGTTGTTGA+TGG + Chr2:17596000-17596019 None:intergenic 35.0%
CTACATTTGATGGAACTCTA+AGG + Chr2:17596756-17596775 None:intergenic 35.0%
CTTAAACAAGAATGAGGAGA+GGG - Chr2:17596660-17596679 MsG0280007584.01.T01:intron 35.0%
GAATGCAAATGAATCTTGTG+AGG - Chr2:17596885-17596904 MsG0280007584.01.T01:intron 35.0%
GATCAATGAGAAAAGCTAAC+GGG - Chr2:17595803-17595822 MsG0280007584.01.T01:intron 35.0%
GATGAAAGCAAAATACAGCA+TGG + Chr2:17595192-17595211 None:intergenic 35.0%
GATGGAGATTCTACATTTGA+TGG + Chr2:17596766-17596785 None:intergenic 35.0%
GCTATAAGTATCCTGCTTTA+TGG - Chr2:17595268-17595287 MsG0280007584.01.T01:CDS 35.0%
GCTTTACCTTGTTAACTTCA+AGG + Chr2:17596440-17596459 None:intergenic 35.0%
GTATGAAGTTCAAATTCCCT+TGG + Chr2:17596418-17596437 None:intergenic 35.0%
GTGGAAGAAGAAATTGATGA+AGG - Chr2:17597006-17597025 MsG0280007584.01.T01:intron 35.0%
TGAGAAGGGAAATAAGAGAA+AGG - Chr2:17596708-17596727 MsG0280007584.01.T01:intron 35.0%
TTCTATATTTAGCCCAGAGT+TGG - Chr2:17596909-17596928 MsG0280007584.01.T01:intron 35.0%
! CCATTGATAGTCTTAGAGAA+TGG - Chr2:17596785-17596804 MsG0280007584.01.T01:intron 35.0%
! CTTTTGCATACACTGTTCAA+AGG + Chr2:17596941-17596960 None:intergenic 35.0%
! GGATTCTAGTCTATTTGCTA+TGG + Chr2:17596734-17596753 None:intergenic 35.0%
! TATGAGCTTTAGTGTAATGC+TGG - Chr2:17595112-17595131 MsG0280007584.01.T01:CDS 35.0%
! TGAAGTTTTGCCTCTACAAT+TGG + Chr2:17595433-17595452 None:intergenic 35.0%
! TTTTGTATCTTTTGCAGGTG+TGG - Chr2:17595327-17595346 MsG0280007584.01.T01:CDS 35.0%
!! CCATTCTCTAAGACTATCAA+TGG + Chr2:17596788-17596807 None:intergenic 35.0%
!! TCTCTAAGACTATCAATGGA+TGG + Chr2:17596784-17596803 None:intergenic 35.0%
!!! TTCAATAGCCAGTTTTGAAG+TGG + Chr2:17595941-17595960 None:intergenic 35.0%
ACATTAGCTGGAATACAAGG+AGG - Chr2:17596006-17596025 MsG0280007584.01.T01:CDS 40.0%
AGAGAGTCAACAATATGCTC+AGG + Chr2:17596081-17596100 None:intergenic 40.0%
AGTATAACCGTGTTTACGGT+TGG - Chr2:17596390-17596409 MsG0280007584.01.T01:exon 40.0%
ATTCAGATACCTGATCCTGA+AGG + Chr2:17596299-17596318 None:intergenic 40.0%
CAAAACCAATGTTGCCTACT+CGG - Chr2:17595483-17595502 MsG0280007584.01.T01:CDS 40.0%
CATCAAGAAAATGCAACCAG+TGG - Chr2:17596636-17596655 MsG0280007584.01.T01:intron 40.0%
CATTAGCTGGAATACAAGGA+GGG - Chr2:17596007-17596026 MsG0280007584.01.T01:CDS 40.0%
GAACCATCAACAACATTAGC+TGG - Chr2:17595994-17596013 MsG0280007584.01.T01:CDS 40.0%
GCTTAAACAAGAATGAGGAG+AGG - Chr2:17596659-17596678 MsG0280007584.01.T01:intron 40.0%
TATGCAAAAGCTTGAAGCAG+AGG - Chr2:17596951-17596970 MsG0280007584.01.T01:intron 40.0%
TTCCAACACCACTTCAAAAC+TGG - Chr2:17595930-17595949 MsG0280007584.01.T01:CDS 40.0%
TTCCTTACAACCATGTGATC+AGG - Chr2:17595687-17595706 MsG0280007584.01.T01:intron 40.0%
! AGTGGGCTTAAACAAGAATG+AGG - Chr2:17596654-17596673 MsG0280007584.01.T01:intron 40.0%
! CTCAGGAAAATGCCAACTTT+TGG + Chr2:17596064-17596083 None:intergenic 40.0%
! GCTCTTAGAATGCTGTTTGT+TGG + Chr2:17595905-17595924 None:intergenic 40.0%
! GGACGTAGTTTAAAATCCCT+CGG + Chr2:17596514-17596533 None:intergenic 40.0%
! TAGGAGTTTTCACACAGTTG+AGG - Chr2:17596167-17596186 MsG0280007584.01.T01:CDS 40.0%
! TCATTCTTGTTTAAGCCCAC+TGG + Chr2:17596655-17596674 None:intergenic 40.0%
! TTTGGTGTGACATAAGATCC+AGG + Chr2:17596835-17596854 None:intergenic 40.0%
!! CACTGGTTGCATTTTCTTGA+TGG + Chr2:17596638-17596657 None:intergenic 40.0%
!! TTTTGAAGATATGCACCCCA+TGG + Chr2:17595737-17595756 None:intergenic 40.0%
ACACTTCACACCTGATCACA+TGG + Chr2:17595700-17595719 None:intergenic 45.0%
AGCTAACGGGATTCCATTGT+TGG - Chr2:17595816-17595835 MsG0280007584.01.T01:intron 45.0%
ATCGCTGAGCTGACAATTCA+TGG - Chr2:17596464-17596483 MsG0280007584.01.T01:intron 45.0%
CAAAATGGACCTTCAGGATC+AGG - Chr2:17596287-17596306 MsG0280007584.01.T01:CDS 45.0%
CAAAGGCAGATACCAACTCT+GGG + Chr2:17596924-17596943 None:intergenic 45.0%
CACCTGATCACATGGTTGTA+AGG + Chr2:17595692-17595711 None:intergenic 45.0%
CATGGACAGGTAGTTGAGTT+TGG - Chr2:17596482-17596501 MsG0280007584.01.T01:intron 45.0%
CTTGGAACCAACCGTAAACA+CGG + Chr2:17596400-17596419 None:intergenic 45.0%
GCAGATGGAATATACTCTCC+TGG - Chr2:17596814-17596833 MsG0280007584.01.T01:intron 45.0%
TCAAAGGCAGATACCAACTC+TGG + Chr2:17596925-17596944 None:intergenic 45.0%
TCAGACACTTGTACATGCGT+CGG + Chr2:17596571-17596590 None:intergenic 45.0%
TGAGCTGACAATTCATGGAC+AGG - Chr2:17596469-17596488 MsG0280007584.01.T01:intron 45.0%
TGAGGTTTGGCATCAACTAC+TGG - Chr2:17595353-17595372 MsG0280007584.01.T01:CDS 45.0%
TTGAGTTTGGTTGTCTCCGA+GGG - Chr2:17596495-17596514 MsG0280007584.01.T01:intron 45.0%
! GGAGAGTATATTCCATCTGC+AGG + Chr2:17596814-17596833 None:intergenic 45.0%
! GTGTTTACGGTTGGTTCCAA+GGG - Chr2:17596399-17596418 MsG0280007584.01.T01:intron 45.0%
! TAAGTTTGGTTCCACCGAGT+AGG + Chr2:17595500-17595519 None:intergenic 45.0%
!!! AGCCAGTTTTGAAGTGGTGT+TGG + Chr2:17595935-17595954 None:intergenic 45.0%
!!! CGAGTAGGCAACATTGGTTT+TGG + Chr2:17595485-17595504 None:intergenic 45.0%
!!! TTTTAGTTTATTTTTTAAAT+TGG - Chr2:17596329-17596348 MsG0280007584.01.T01:CDS 5.0%
AACCAATGTTGCCTACTCGG+TGG - Chr2:17595486-17595505 MsG0280007584.01.T01:intron 50.0%
AGAGAATGGCTTCCTGCAGA+TGG - Chr2:17596799-17596818 MsG0280007584.01.T01:intron 50.0%
GTTGAGTTTGGTTGTCTCCG+AGG - Chr2:17596494-17596513 MsG0280007584.01.T01:intron 50.0%
TGCAGACAAGAGCAAGGTAC+TGG + Chr2:17595867-17595886 None:intergenic 50.0%
TTCCACCGAGTAGGCAACAT+TGG + Chr2:17595491-17595510 None:intergenic 50.0%
TTGCTGTGCAGACAAGAGCA+AGG + Chr2:17595873-17595892 None:intergenic 50.0%
! CGTGTTTACGGTTGGTTCCA+AGG - Chr2:17596398-17596417 MsG0280007584.01.T01:five_prime_UTR 50.0%
! CTTTTGCAGGTGTGGACTTG+AGG - Chr2:17595335-17595354 MsG0280007584.01.T01:CDS 50.0%
!! AGCAAGGTACTGGTCACTAG+TGG + Chr2:17595857-17595876 None:intergenic 50.0%
GCAGGTGTGGACTTGAGGTT+TGG - Chr2:17595340-17595359 MsG0280007584.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 17594992 17597134 17594992 ID=MsG0280007584.01;Name=MsG0280007584.01
Chr2 mRNA 17594992 17597134 17594992 ID=MsG0280007584.01.T01;Parent=MsG0280007584.01;Name=MsG0280007584.01.T01;_AED=0.49;_eAED=0.49;_QI=170|1|1|1|0.33|0.25|4|99|328
Chr2 exon 17594992 17595504 17594992 ID=MsG0280007584.01.T01:exon:10608;Parent=MsG0280007584.01.T01
Chr2 exon 17595818 17596417 17595818 ID=MsG0280007584.01.T01:exon:10607;Parent=MsG0280007584.01.T01
Chr2 exon 17596752 17596782 17596752 ID=MsG0280007584.01.T01:exon:10606;Parent=MsG0280007584.01.T01
Chr2 exon 17597023 17597134 17597023 ID=MsG0280007584.01.T01:exon:10605;Parent=MsG0280007584.01.T01
Chr2 five_prime_UTR 17597023 17597134 17597023 ID=MsG0280007584.01.T01:five_prime_utr;Parent=MsG0280007584.01.T01
Chr2 five_prime_UTR 17596752 17596782 17596752 ID=MsG0280007584.01.T01:five_prime_utr;Parent=MsG0280007584.01.T01
Chr2 five_prime_UTR 17596391 17596417 17596391 ID=MsG0280007584.01.T01:five_prime_utr;Parent=MsG0280007584.01.T01
Chr2 CDS 17595818 17596390 17595818 ID=MsG0280007584.01.T01:cds;Parent=MsG0280007584.01.T01
Chr2 CDS 17595091 17595504 17595091 ID=MsG0280007584.01.T01:cds;Parent=MsG0280007584.01.T01
Chr2 three_prime_UTR 17594992 17595090 17594992 ID=MsG0280007584.01.T01:three_prime_utr;Parent=MsG0280007584.01.T01
Gene Sequence

>MsG0280007584.01.T01

ATGGGGTGCATATCTTCAAAACTTATAATAGCAAGATCAATCAGTTACCATGAAGAGAGAAATCAAAGATCAATGAGAAAAGCTAACGGGATTCCATTGTTGGAAGATCTAATCATCTCCACTAGTGACCAGTACCTTGCTCTTGTCTGCACAGCAAACAAAAAATCCAACAAACAGCATTCTAAGAGCTTAAGTTCCAACACCACTTCAAAACTGGCTATTGAACCTGAAAGTTCTGAAGTTATTGATGAAAAGTTGGAACCATCAACAACATTAGCTGGAATACAAGGAGGGAAAGAATTTGAGAATGATCACAAGAATAGGTCCAAAAGTTGGCATTTTCCTGAGCATATTGTTGACTCTCTTAATCAGGAGAATCTATCTGCTATTGAAGATAAAGATGAGTTGAGATCTAAGAGTGATTTAGGTAATAGGAGTTTTCACACAGTTGAGGAATATGACGATATTGTTAATAGAATTTGGTTGAATAAGTCACAAATTGATCAACAAAGTGAGTTTAATAATGAAGATGAAGATGATGTCTCAGTAATCAAAATGGACCTTCAGGATCAGGATAAAGATTCTTCCATCAAGAAAATGCAACCAGTGGGCTTAAACAAGAATGAGGAGAGGGTTCCAAGTCATAAAACAAGAATGCTTGAGAAGGGAAATAAGAGAAAGGCCATAGCAAATAGACTAGAATCCCTTAGAGTTCCATCAAATGTAGAATCTCCATCCATTGATAGTCTTAGAGAATGGCTTCCTGCAGATGGAATATACTCTCCTGGATCTTATGTCACACCAAAATTTGGAAGCTATTCTTCAATGAACATTAGGAATGCAAATGAATCTTGTGAGGATTCTATATTTAGCCCAGAGTTGGTATCTGCCTTTGAACAGTGTATGCAAAAGCTTGAAGCAGAGGAAGAAAACATTCTGAAACAAATTCTAGAGAATGTGGAAGAAGAAATTGATGAAGGAAAGTAG
Protein sequence

>MsG0280007584.01.T01

MGCISSKLIIARSISYHEERNQRSMRKANGIPLLEDLIISTSDQYLALVCTANKKSNKQHSKSLSSNTTSKLAIEPESSEVIDEKLEPSTTLAGIQGGKEFENDHKNRSKSWHFPEHIVDSLNQENLSAIEDKDELRSKSDLGNRSFHTVEEYDDIVNRIWLNKSQIDQQSEFNNEDEDDVSVIKMDLQDQDKDSSIKKMQPVGLNKNEERVPSHKTRMLEKGNKRKAIANRLESLRVPSNVESPSIDSLREWLPADGIYSPGSYVTPKFGSYSSMNIRNANESCEDSIFSPELVSAFEQCMQKLEAEEENILKQILENVEEEIDEGK*