AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002912.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002912.01.T01 MTR_1g052475 82.407 108 0 1 138 226 1 108 1.47e-53 172
MsG0180002912.01.T01 MTR_0262s0050 77.778 108 5 1 138 226 1 108 4.11e-50 164
MsG0180002912.01.T01 MTR_8g089985 69.231 104 13 1 142 226 7 110 2.74e-43 146
MsG0180002912.01.T01 MTR_3g086980 70.192 104 12 1 142 226 6 109 3.44e-43 146
MsG0180002912.01.T01 MTR_8g027220 63.810 105 19 1 144 229 18 122 2.51e-38 134
MsG0180002912.01.T01 MTR_7g117910 65.657 99 15 1 147 226 15 113 1.54e-37 131
MsG0180002912.01.T01 MTR_4g064897 54.369 103 28 1 146 229 6 108 3.00e-31 115
MsG0180002912.01.T01 MTR_2g083860 55.000 100 26 1 146 226 7 106 2.38e-30 112
MsG0180002912.01.T01 MTR_3g069510 52.427 103 30 1 146 229 6 108 2.39e-30 112
MsG0180002912.01.T01 MTR_8g036220 51.376 109 33 2 138 226 1 109 8.00e-30 111
MsG0180002912.01.T01 MTR_2g005510 54.545 99 26 1 147 226 10 108 1.96e-29 110
MsG0180002912.01.T01 MTR_1g078200 56.250 96 23 1 150 226 12 107 2.38e-29 110
MsG0180002912.01.T01 MTR_7g405790 55.789 95 23 1 151 226 14 108 5.78e-29 109
MsG0180002912.01.T01 MTR_2g075950 55.208 96 24 1 150 226 11 106 6.65e-29 108
MsG0180002912.01.T01 MTR_2g090865 50.485 103 32 1 143 226 2 104 2.33e-28 107
MsG0180002912.01.T01 MTR_2g014990 48.214 112 33 3 134 226 1 106 4.52e-27 104
MsG0180002912.01.T01 MTR_4g088090 48.214 112 33 3 134 226 1 106 4.87e-27 104
MsG0180002912.01.T01 MTR_4g079350 48.214 112 33 3 134 226 1 106 5.70e-27 103
MsG0180002912.01.T01 MTR_7g051940 52.632 95 26 1 151 226 12 106 1.83e-26 102
MsG0180002912.01.T01 MTR_8g107070 45.545 101 36 1 145 226 7 107 8.42e-25 99.4
MsG0180002912.01.T01 MTR_6g079550 46.875 96 32 1 145 221 5 100 1.89e-23 94.7
MsG0180002912.01.T01 MTR_8g031660 43.617 94 34 1 151 225 5 98 1.64e-18 81.3
MsG0180002912.01.T01 MTR_8g031870 42.553 94 35 1 151 225 5 98 1.79e-18 80.9
MsG0180002912.01.T01 MTR_6g021790 41.053 95 37 1 150 225 4 98 5.61e-18 80.1
MsG0180002912.01.T01 MTR_1g068730 39.216 102 43 1 150 232 13 114 5.92e-18 79.0
MsG0180002912.01.T01 MTR_1g068740 39.216 102 43 1 150 232 13 114 1.20e-17 79.0
MsG0180002912.01.T01 MTR_8g093740 38.614 101 42 2 146 227 7 106 1.30e-17 79.0
MsG0180002912.01.T01 MTR_7g100020 39.216 102 43 1 150 232 13 114 3.08e-17 78.2
MsG0180002912.01.T01 MTR_1g068730 39.216 102 43 1 150 232 13 114 3.31e-17 78.2
MsG0180002912.01.T01 MTR_1g068740 39.216 102 43 1 150 232 13 114 3.34e-17 78.2
MsG0180002912.01.T01 MTR_1g115325 39.216 102 43 1 150 232 13 114 5.76e-17 77.4
MsG0180002912.01.T01 MTR_2g027660 39.362 94 38 1 151 225 5 98 1.09e-16 76.6
MsG0180002912.01.T01 MTR_8g031830 40.426 94 37 1 151 225 5 98 3.72e-16 74.7
MsG0180002912.01.T01 MTR_8g006970 38.000 100 43 1 146 226 2 101 4.94e-16 73.9
MsG0180002912.01.T01 MTR_8g099250 53.030 66 30 1 138 202 1 66 7.53e-16 70.5
MsG0180002912.01.T01 MTR_7g081700 38.000 100 43 1 146 226 2 101 7.63e-16 73.9
MsG0180002912.01.T01 MTR_7g103070 40.206 97 39 1 150 227 14 110 1.00e-15 73.9
MsG0180002912.01.T01 MTR_2g096550 35.294 102 47 1 150 232 13 114 1.01e-15 73.9
MsG0180002912.01.T01 MTR_1g029450 37.374 99 42 2 148 227 13 110 1.09e-15 73.9
MsG0180002912.01.T01 MTR_3g053480 52.174 69 30 1 134 202 1 66 2.05e-15 69.3
MsG0180002912.01.T01 MTR_3g096350 37.000 100 43 2 147 227 7 105 2.18e-15 71.6
MsG0180002912.01.T01 MTR_8g031680 40.426 94 37 1 151 225 5 98 2.58e-15 72.8
MsG0180002912.01.T01 MTR_1g062760 40.206 97 38 2 150 227 12 107 3.56e-15 72.4
MsG0180002912.01.T01 MTR_2g005500 37.500 96 41 1 150 226 7 102 3.84e-15 72.0
MsG0180002912.01.T01 MTR_3g096350 37.000 100 43 2 147 227 7 105 3.85e-15 71.2
MsG0180002912.01.T01 MTR_8g006970 39.362 94 38 1 150 224 20 113 5.39e-15 72.0
MsG0180002912.01.T01 MTR_3g096350 37.000 100 43 2 147 227 7 105 6.24e-15 71.6
MsG0180002912.01.T01 MTR_8g031810 41.250 80 42 2 151 225 5 84 9.37e-14 65.5
MsG0180002912.01.T01 MTR_1g090717 39.394 99 40 2 146 224 9 107 2.23e-13 67.4
MsG0180002912.01.T01 MTR_4g063160 35.577 104 46 1 150 232 13 116 1.12e-12 65.5
MsG0180002912.01.T01 MTR_1g094220 37.500 88 35 1 154 221 33 120 1.41e-11 62.4
MsG0180002912.01.T01 MTR_1g094220 37.500 88 35 1 154 221 33 120 1.45e-11 62.4
MsG0180002912.01.T01 MTR_1g094220 37.500 88 35 1 154 221 33 120 1.68e-11 62.0
MsG0180002912.01.T01 MTR_1g094220 37.500 88 35 1 154 221 33 120 2.05e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002912.01.T01 AT3G12160 78.704 108 4 1 138 226 1 108 1.57e-51 167
MsG0180002912.01.T01 AT5G47960 69.444 108 14 1 138 226 1 108 2.65e-44 149
MsG0180002912.01.T01 AT5G65270 66.346 104 16 1 142 226 7 110 3.15e-41 141
MsG0180002912.01.T01 AT4G39990 67.347 98 13 1 148 226 13 110 1.42e-38 134
MsG0180002912.01.T01 AT1G01200 63.725 102 18 1 147 229 23 124 9.55e-36 127
MsG0180002912.01.T01 AT5G59150 56.311 103 26 1 146 229 6 108 5.71e-32 117
MsG0180002912.01.T01 AT3G46830 54.369 103 28 1 146 229 6 108 4.22e-31 114
MsG0180002912.01.T01 AT3G46830 54.369 103 28 1 146 229 6 108 4.22e-31 114
MsG0180002912.01.T01 AT1G07410 53.398 103 29 1 146 229 6 108 1.12e-30 113
MsG0180002912.01.T01 AT1G16920 56.250 96 23 1 150 226 11 106 9.76e-30 111
MsG0180002912.01.T01 AT1G06400 50.467 107 34 1 146 233 7 113 1.57e-29 110
MsG0180002912.01.T01 AT1G09630 53.000 100 28 1 146 226 6 105 3.46e-29 109
MsG0180002912.01.T01 AT5G47520 51.429 105 32 1 141 226 3 107 7.75e-29 108
MsG0180002912.01.T01 AT4G18800 53.535 99 27 1 150 229 11 109 1.08e-28 108
MsG0180002912.01.T01 AT1G05810 48.571 105 35 1 141 226 1 105 5.11e-28 107
MsG0180002912.01.T01 AT2G43130 52.083 96 27 1 150 226 10 105 5.56e-28 106
MsG0180002912.01.T01 AT1G05810 48.571 105 35 1 141 226 47 151 9.23e-28 107
MsG0180002912.01.T01 AT2G31680 52.083 96 27 1 150 226 10 105 1.10e-27 105
MsG0180002912.01.T01 AT5G60860 51.000 100 30 1 146 226 7 106 1.85e-27 105
MsG0180002912.01.T01 AT5G45750 51.020 98 29 1 146 224 7 104 2.97e-27 104
MsG0180002912.01.T01 AT4G18430 48.214 112 33 3 134 226 1 106 4.94e-27 104
MsG0180002912.01.T01 AT1G73640 47.525 101 34 1 145 226 6 106 1.98e-26 103
MsG0180002912.01.T01 AT3G15060 51.042 96 28 1 150 226 11 106 2.05e-26 102
MsG0180002912.01.T01 AT3G07410 48.571 105 35 1 150 235 10 114 2.28e-26 102
MsG0180002912.01.T01 AT1G28550 53.125 96 26 1 150 226 11 106 3.56e-26 102
MsG0180002912.01.T01 AT2G33870 48.214 112 33 3 134 226 1 106 7.92e-26 101
MsG0180002912.01.T01 AT1G18200 46.535 101 35 1 145 226 6 106 9.93e-26 101
MsG0180002912.01.T01 AT4G35860 40.000 95 38 1 150 225 4 98 2.00e-17 78.6
MsG0180002912.01.T01 AT1G43890 41.414 99 38 2 148 227 9 106 3.00e-17 78.2
MsG0180002912.01.T01 AT1G43890 41.414 99 38 2 148 227 9 106 3.00e-17 78.2
MsG0180002912.01.T01 AT1G43890 41.414 99 38 2 148 227 9 106 3.00e-17 78.2
MsG0180002912.01.T01 AT5G59840 39.216 102 43 1 150 232 13 114 5.01e-17 77.8
MsG0180002912.01.T01 AT3G53610 39.216 102 43 1 150 232 13 114 5.22e-17 77.4
MsG0180002912.01.T01 AT3G53610 39.216 102 43 1 150 232 13 114 5.22e-17 77.4
MsG0180002912.01.T01 AT3G53610 39.216 102 43 1 150 232 13 114 5.22e-17 77.4
MsG0180002912.01.T01 AT3G46060 39.216 102 43 1 150 232 13 114 5.38e-17 77.4
MsG0180002912.01.T01 AT3G46060 39.216 102 43 1 150 232 13 114 5.38e-17 77.4
MsG0180002912.01.T01 AT3G46060 39.216 102 43 1 150 232 13 114 5.38e-17 77.4
MsG0180002912.01.T01 AT4G17170 39.362 94 38 1 151 225 5 98 1.18e-16 76.6
MsG0180002912.01.T01 AT4G17160 40.426 94 37 1 151 225 5 98 2.00e-16 75.9
MsG0180002912.01.T01 AT1G02130 39.000 100 42 1 146 226 2 101 2.11e-16 75.5
MsG0180002912.01.T01 AT3G11730 37.963 108 41 2 138 226 1 101 1.89e-15 73.2
MsG0180002912.01.T01 AT4G17530 37.000 100 44 1 146 226 2 101 9.56e-15 71.2
MsG0180002912.01.T01 AT5G47200 37.000 100 44 1 146 226 2 101 1.16e-14 70.9
MsG0180002912.01.T01 AT5G03530 40.426 94 36 2 150 224 11 103 4.73e-14 69.3
MsG0180002912.01.T01 AT5G03530 40.426 94 36 2 150 224 11 103 4.73e-14 69.3
MsG0180002912.01.T01 AT3G09900 38.235 102 44 1 150 232 13 114 7.40e-14 68.9
MsG0180002912.01.T01 AT5G03520 38.235 102 44 1 150 232 13 114 8.01e-14 68.9
MsG0180002912.01.T01 AT3G54840 38.636 88 34 1 154 221 35 122 4.23e-12 63.5
MsG0180002912.01.T01 AT3G54840 38.636 88 34 1 154 221 35 122 5.07e-12 63.5
MsG0180002912.01.T01 AT2G21880 38.095 84 41 1 152 224 9 92 1.44e-11 62.4
MsG0180002912.01.T01 AT3G54840 37.931 87 34 1 155 221 2 88 1.52e-11 61.6
MsG0180002912.01.T01 AT5G59150 74.286 35 9 0 195 229 23 57 3.95e-11 60.5

Find 93 sgRNAs with CRISPR-Local

Find 700 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGATCCTGGTGGTGGTTC+AGG 0.187374 1:+52890663 MsG0180002912.01.T01:three_prime_UTR
AAACTTGTTTATACAAATTC+TGG 0.216872 1:+52890962 MsG0180002912.01.T01:three_prime_UTR
CCTGCTATGGGCTTGGGTTT+TGG 0.219721 1:+52880335 MsG0180002912.01.T01:CDS
TTCTGGCCCTTTCTGGTTAT+AGG 0.255671 1:+52890935 MsG0180002912.01.T01:three_prime_UTR
CTTGCTTGTTGTGATCTTCT+TGG 0.260302 1:+52890772 MsG0180002912.01.T01:three_prime_UTR
AAAAGATATCAAGTTAATTA+TGG 0.266248 1:+52882309 MsG0180002912.01.T01:CDS
CCAGAAAGGGCCAGAAAATA+AGG 0.273026 1:-52890928 None:intergenic
AATATTGTCATAATGCTAAT+TGG 0.297275 1:+52890449 MsG0180002912.01.T01:CDS
GTAAGGAATACTAGGATTCT+AGG 0.298436 1:+52880258 MsG0180002912.01.T01:CDS
TAATTTGTAGCAACTAGTTT+AGG 0.321101 1:+52891033 MsG0180002912.01.T01:three_prime_UTR
TTGCTTGGTTCCCAAGCAAC+AGG 0.328949 1:+52880358 MsG0180002912.01.T01:CDS
CACAAATACCCCTGTTGCTT+GGG 0.332694 1:-52880368 None:intergenic
TTATAGCCTGCTATGGGCTT+GGG 0.337387 1:+52880329 MsG0180002912.01.T01:CDS
TTTATAGCCTGCTATGGGCT+TGG 0.343500 1:+52880328 MsG0180002912.01.T01:CDS
CATAGGATGTCGAATTTATA+CGG 0.347484 1:+52887917 MsG0180002912.01.T01:intron
ATTGGCAACAAGTGTGATTT+GGG 0.348821 1:+52890467 MsG0180002912.01.T01:exon
ATTTAACAGAGCAAATAGTA+TGG 0.350590 1:+52882345 MsG0180002912.01.T01:CDS
TATTATCAATAACAGAGTTT+TGG 0.351734 1:-52888083 None:intergenic
ATGGAAACAGTGTAACTTAC+TGG 0.358344 1:+52891003 MsG0180002912.01.T01:three_prime_UTR
TTGCTTGTTGTGATCTTCTT+GGG 0.366484 1:+52890773 MsG0180002912.01.T01:three_prime_UTR
CCCTAAGCCTAAAACCTTCT+CGG 0.368071 1:-52880142 None:intergenic
AATTGGCAACAAGTGTGATT+TGG 0.372094 1:+52890466 MsG0180002912.01.T01:exon
CAGATCCTGGTGGTGGTTCA+GGG 0.385083 1:+52890664 MsG0180002912.01.T01:three_prime_UTR
GCGACCTCGAAAACAATATC+AGG 0.387968 1:-52880120 None:intergenic
TTAAAGCATTGGGTAAGGTT+GGG 0.426720 1:+52882269 MsG0180002912.01.T01:CDS
GTTAAAGCATTGGGTAAGGT+TGG 0.434120 1:+52882268 MsG0180002912.01.T01:CDS
TTCTGGTTCAGTTCAGATAG+AGG 0.438214 1:+52890979 MsG0180002912.01.T01:three_prime_UTR
ACACAAATACCCCTGTTGCT+TGG 0.441568 1:-52880369 None:intergenic
AAAGCACTCGCATCTTGGTT+AGG 0.445772 1:-52890714 None:intergenic
GTTGATTCTAAAGCTACAAT+TGG 0.446862 1:+52888046 MsG0180002912.01.T01:CDS
TTTCAAAAGCACTCGCATCT+TGG 0.457557 1:-52890719 None:intergenic
ACCAGGATCTGCCTCATCAT+TGG 0.458276 1:-52890652 None:intergenic
GTAGTATTTATAGCCTGCTA+TGG 0.461565 1:+52880322 MsG0180002912.01.T01:CDS
TAAAGCATTGGGTAAGGTTG+GGG 0.463158 1:+52882270 MsG0180002912.01.T01:CDS
AGGAGTTAAAGCATTGGGTA+AGG 0.468074 1:+52882264 MsG0180002912.01.T01:intron
AGGGCCAGAAAATAAGGAAA+TGG 0.475848 1:-52890922 None:intergenic
TGGTGGTTCAGGGCTTCTGA+AGG 0.476345 1:+52890674 MsG0180002912.01.T01:three_prime_UTR
TTGATTGGTGATTCTGCCGT+TGG 0.485705 1:+52887980 MsG0180002912.01.T01:CDS
TTTAAATCCTATAACCAGAA+AGG 0.486552 1:-52890942 None:intergenic
TGAGTAGGAGTTAAAGCATT+GGG 0.495538 1:+52882259 MsG0180002912.01.T01:intron
CTGATGTCTCCATAAAGAAA+AGG 0.498679 1:-52890544 None:intergenic
AAAGGCGGTTTCGACATTAG+TGG 0.498739 1:-52890576 None:intergenic
AGTACAGTTGGCGCCGTCTG+TGG 0.498795 1:-52880221 None:intergenic
TTAAATCCTATAACCAGAAA+GGG 0.499141 1:-52890941 None:intergenic
AAAGTACGGTAAGGAATACT+AGG 0.501004 1:+52880250 MsG0180002912.01.T01:CDS
GTGTGATTTGGGAACTCTAA+AGG 0.501914 1:+52890478 MsG0180002912.01.T01:exon
CACATGGCAAGGATGGTTAG+AGG 0.505991 1:+52890403 MsG0180002912.01.T01:CDS
CCAAAACCCAAGCCCATAGC+AGG 0.508460 1:-52880335 None:intergenic
CAGGGCTTCTGAAGGGAACC+AGG 0.508518 1:+52890682 MsG0180002912.01.T01:three_prime_UTR
GGGAAGCTTATTGCTCACTC+TGG 0.508994 1:+52890793 MsG0180002912.01.T01:three_prime_UTR
AGTACCTACTGAAGATGCTC+AGG 0.512755 1:+52890502 MsG0180002912.01.T01:three_prime_UTR
TTGGCGCCGTCTGTGGGAAA+AGG 0.512798 1:-52880214 None:intergenic
ATTTGATCACATGGCAAGGA+TGG 0.518137 1:+52890396 MsG0180002912.01.T01:CDS
TTGGTTAGGAACAATTATCC+TGG 0.519414 1:-52890700 None:intergenic
CAATCTCATCAGCAAAATGT+AGG 0.527732 1:+52890856 MsG0180002912.01.T01:three_prime_UTR
TTCTGTTAGAATAGTCAGAA+AGG 0.528911 1:-52890594 None:intergenic
ACTCTGGCTCTGCCTACATG+TGG 0.536353 1:+52890809 MsG0180002912.01.T01:three_prime_UTR
CTCTGGCTCTGCCTACATGT+GGG 0.541629 1:+52890810 MsG0180002912.01.T01:three_prime_UTR
GGTGGTTCAGGGCTTCTGAA+GGG 0.541689 1:+52890675 MsG0180002912.01.T01:three_prime_UTR
GCGTATTACCGTGGAGCTGT+TGG 0.546431 1:+52890337 MsG0180002912.01.T01:CDS
TAAGGAATACTAGGATTCTA+GGG 0.548427 1:+52880259 MsG0180002912.01.T01:CDS
GCCAATGATGAGGCAGATCC+TGG 0.550258 1:+52890651 MsG0180002912.01.T01:three_prime_UTR
TTTAACAGAGCAAATAGTAT+GGG 0.550898 1:+52882346 MsG0180002912.01.T01:CDS
GAGAAATCTGAGGCCGATGA+TGG 0.553779 1:+52880087 MsG0180002912.01.T01:CDS
TAGTATTTATAGCCTGCTAT+GGG 0.558047 1:+52880323 MsG0180002912.01.T01:CDS
AATCTGAGGCCGATGATGGT+TGG 0.558114 1:+52880091 MsG0180002912.01.T01:CDS
AGAAGCCCTGAACCACCACC+AGG 0.558428 1:-52890669 None:intergenic
AGGCGAAGACCAACCATCAT+CGG 0.561910 1:-52880100 None:intergenic
GAGCAAATAGTATGGGTTCG+TGG 0.567005 1:+52882353 MsG0180002912.01.T01:CDS
GCGATTCAGAAACGTGGTCA+AGG 0.574970 1:+52880182 MsG0180002912.01.T01:CDS
TTGAGTAGGAGTTAAAGCAT+TGG 0.577929 1:+52882258 MsG0180002912.01.T01:intron
GTACAGTTGGCGCCGTCTGT+GGG 0.578064 1:-52880220 None:intergenic
AGATCACAACAAGCAAGAGT+AGG 0.583275 1:-52890766 None:intergenic
GGCCTCAGATTTCTCAAACA+TGG 0.583310 1:-52880079 None:intergenic
TGCTTGGTTCCCAAGCAACA+GGG 0.584634 1:+52880359 MsG0180002912.01.T01:CDS
GAAAAGAAGGGTGGTTGCTG+CGG 0.586510 1:+52890738 MsG0180002912.01.T01:three_prime_UTR
GCGTCAATCATTTGATCACA+TGG 0.593625 1:+52890387 MsG0180002912.01.T01:CDS
TACTCTTGAGAGCATTCTCA+AGG 0.601988 1:-52880302 None:intergenic
AATCATTTGATCACATGGCA+AGG 0.605706 1:+52890392 MsG0180002912.01.T01:CDS
AACACTTACTGCCAATGATG+AGG 0.617734 1:+52890641 MsG0180002912.01.T01:three_prime_UTR
GTTCAGTTCAGATAGAGGAA+TGG 0.624925 1:+52890984 MsG0180002912.01.T01:three_prime_UTR
AGGATGGTTAGAGGAACTGA+GGG 0.637857 1:+52890412 MsG0180002912.01.T01:CDS
GATGAGGCAGATCCTGGTGG+TGG 0.641867 1:+52890657 MsG0180002912.01.T01:three_prime_UTR
GCTTGGTTCCCAAGCAACAG+GGG 0.647833 1:+52880360 MsG0180002912.01.T01:CDS
ACATCGCTCCAACAGCTCCA+CGG 0.650042 1:-52890345 None:intergenic
AACTCCTGAGCATCTTCAGT+AGG 0.655334 1:-52890506 None:intergenic
GTAACTAGTGCGTATTACCG+TGG 0.661026 1:+52890328 MsG0180002912.01.T01:CDS
CGATTTGCGATTCAGAAACG+TGG 0.661423 1:+52880176 MsG0180002912.01.T01:CDS
TGTTAGAATAGTCAGAAAGG+CGG 0.662740 1:-52890591 None:intergenic
AAGGATGGTTAGAGGAACTG+AGG 0.665488 1:+52890411 MsG0180002912.01.T01:CDS
TGCCATGTTTGAGAAATCTG+AGG 0.667735 1:+52880077 None:intergenic
AATGATGAGGCAGATCCTGG+TGG 0.756314 1:+52890654 MsG0180002912.01.T01:three_prime_UTR
GGATGGTTAGAGGAACTGAG+GGG 0.795249 1:+52890413 MsG0180002912.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATTATTTAAATTA+TGG - Chr1:52887184-52887203 None:intergenic 0.0%
!! AAAAATATTATTTAAATTAT+GGG - Chr1:52887183-52887202 None:intergenic 0.0%
!!! AATTTAAATAATATTTTTTT+TGG + Chr1:52887185-52887204 MsG0180002912.01.T01:intron 0.0%
!! GAATAATAAAATAAAATAGA+GGG + Chr1:52883183-52883202 MsG0180002912.01.T01:intron 10.0%
!! TATTATTTAATATTTATCGT+CGG + Chr1:52884413-52884432 MsG0180002912.01.T01:intron 10.0%
!! TGAATAATAAAATAAAATAG+AGG + Chr1:52883182-52883201 MsG0180002912.01.T01:intron 10.0%
!!! AAATGTTTATATTTTAGAAA+TGG + Chr1:52883373-52883392 MsG0180002912.01.T01:intron 10.0%
!!! AGTTAAATTTTCTTATAAAT+AGG + Chr1:52885634-52885653 MsG0180002912.01.T01:intron 10.0%
!!! ATAATTTAACTTTTAAAAGT+TGG - Chr1:52887090-52887109 None:intergenic 10.0%
!!! CCATAAAAAATATAATTTTA+TGG - Chr1:52887005-52887024 None:intergenic 10.0%
!!! CCATAAAATTATATTTTTTA+TGG + Chr1:52887002-52887021 MsG0180002912.01.T01:intron 10.0%
!!! TAAAATTATATTTTTTATGG+TGG + Chr1:52887005-52887024 MsG0180002912.01.T01:intron 10.0%
!!! TTAAATAATATTTTTTTTGG+TGG + Chr1:52887188-52887207 MsG0180002912.01.T01:intron 10.0%
!!! TTTAAATGAAAGAAATATTT+TGG + Chr1:52889832-52889851 MsG0180002912.01.T01:intron 10.0%
!!! TTTCTTTTTGTATTTTTTTT+TGG - Chr1:52887681-52887700 None:intergenic 10.0%
!! AAAAGATATCAAGTTAATTA+TGG + Chr1:52882309-52882328 MsG0180002912.01.T01:CDS 15.0%
!! AAATTTCAAAAGTTTCAAAT+AGG - Chr1:52886571-52886590 None:intergenic 15.0%
!! AGTATTTATAATATTAGAAG+AGG - Chr1:52885278-52885297 None:intergenic 15.0%
!! ATAAAAACAAATGTCAAATA+AGG + Chr1:52884840-52884859 MsG0180002912.01.T01:intron 15.0%
!! ATAAACTATATAACTAAATG+AGG + Chr1:52881772-52881791 MsG0180002912.01.T01:intron 15.0%
!! ATTATTTAATATTTATCGTC+GGG + Chr1:52884414-52884433 MsG0180002912.01.T01:intron 15.0%
!! CAATTAAGAATAACAATAAT+AGG - Chr1:52886058-52886077 None:intergenic 15.0%
!! GACGATAAATATTAAATAAT+AGG - Chr1:52884414-52884433 None:intergenic 15.0%
!! GGAATATTAATTTATGTATT+AGG - Chr1:52885086-52885105 None:intergenic 15.0%
!! TAAAAACAAATGTCAAATAA+GGG + Chr1:52884841-52884860 MsG0180002912.01.T01:intron 15.0%
!! TAAACTATATAACTAAATGA+GGG + Chr1:52881773-52881792 MsG0180002912.01.T01:intron 15.0%
!! TAGGAATATATTTAATAGTA+TGG - Chr1:52884395-52884414 None:intergenic 15.0%
!! TATATATAGTATATTTCCTA+CGG - Chr1:52885661-52885680 None:intergenic 15.0%
!! TATTCTTAATTGTATTTCTT+AGG + Chr1:52886066-52886085 MsG0180002912.01.T01:intron 15.0%
!! TGAAATGTAATTTACAAATT+GGG + Chr1:52888982-52889001 MsG0180002912.01.T01:intron 15.0%
!! TGTTATATAAGATGAAAATA+AGG + Chr1:52886010-52886029 MsG0180002912.01.T01:intron 15.0%
!!! AAAAAGACTTATCTTATTTA+GGG + Chr1:52882208-52882227 MsG0180002912.01.T01:intron 15.0%
!!! ATAGAAAAAATTGTTGTTTA+AGG - Chr1:52885878-52885897 None:intergenic 15.0%
!!! ATAGTTATTTTTTGTTGAAA+TGG - Chr1:52880925-52880944 None:intergenic 15.0%
!!! ATGAATGTTTGTTTTTTTTT+TGG + Chr1:52884800-52884819 MsG0180002912.01.T01:intron 15.0%
!!! TAAAAAGACTTATCTTATTT+AGG + Chr1:52882207-52882226 MsG0180002912.01.T01:intron 15.0%
!!! TAAAAGTACAAATATGTATT+TGG + Chr1:52886676-52886695 MsG0180002912.01.T01:intron 15.0%
!!! TAAATGATAATGATAATGAT+GGG + Chr1:52888241-52888260 MsG0180002912.01.T01:intron 15.0%
!!! TAGAAAAAATTGTTGTTTAA+GGG - Chr1:52885877-52885896 None:intergenic 15.0%
!!! TAGATTTATTTTGTTTAGTT+TGG + Chr1:52881586-52881605 MsG0180002912.01.T01:intron 15.0%
!!! TATTGATAATAAAACTGTTA+AGG + Chr1:52888095-52888114 MsG0180002912.01.T01:intron 15.0%
!!! TGAAAAATCATTTTTAGATA+TGG + Chr1:52889866-52889885 MsG0180002912.01.T01:intron 15.0%
!!! TGTTCTATTAATTTTCTTTA+AGG - Chr1:52885107-52885126 None:intergenic 15.0%
!!! TTAAATGATAATGATAATGA+TGG + Chr1:52888240-52888259 MsG0180002912.01.T01:intron 15.0%
!!! TTCAGTGATATTATTAATTT+TGG - Chr1:52889285-52889304 None:intergenic 15.0%
!!! TTCTATTTTTCTTTGTTATT+TGG - Chr1:52887525-52887544 None:intergenic 15.0%
!!! TTGAAACTTTTGAAATTTAA+AGG + Chr1:52886573-52886592 MsG0180002912.01.T01:intron 15.0%
!!! TTTGTTCAATTTTTAATCAT+AGG + Chr1:52887900-52887919 MsG0180002912.01.T01:intron 15.0%
!! AAAACAACACAACAAATAAA+GGG - Chr1:52884010-52884029 None:intergenic 20.0%
!! AAAATACACGATTTAGTAAA+AGG + Chr1:52882384-52882403 MsG0180002912.01.T01:intron 20.0%
!! AAATACACGATTTAGTAAAA+GGG + Chr1:52882385-52882404 MsG0180002912.01.T01:intron 20.0%
!! AATAAAGAAAAAACGAGTAT+TGG + Chr1:52887432-52887451 MsG0180002912.01.T01:intron 20.0%
!! AATATTGTCATAATGCTAAT+TGG + Chr1:52890449-52890468 MsG0180002912.01.T01:CDS 20.0%
!! ACTTAAATTAGAATGAGAAT+GGG + Chr1:52881961-52881980 MsG0180002912.01.T01:intron 20.0%
!! ATAAGAGGTAATAGTTATAA+TGG + Chr1:52882766-52882785 MsG0180002912.01.T01:intron 20.0%
!! ATAGGAAATAAAACTAACTA+AGG + Chr1:52889440-52889459 MsG0180002912.01.T01:intron 20.0%
!! ATTCTTGAATTTCTTGAAAA+AGG - Chr1:52889504-52889523 None:intergenic 20.0%
!! CAATTCAATATGTCAAAATT+AGG + Chr1:52881381-52881400 MsG0180002912.01.T01:intron 20.0%
!! CATTGCATAAATAATGTATT+TGG + Chr1:52885566-52885585 MsG0180002912.01.T01:intron 20.0%
!! CTGAAATGTAATTTACAAAT+TGG + Chr1:52888981-52889000 MsG0180002912.01.T01:intron 20.0%
!! GAAGCTTATTATAGAAATAT+AGG + Chr1:52886867-52886886 MsG0180002912.01.T01:intron 20.0%
!! GATTATTTATAGTGTTAGAA+AGG - Chr1:52886401-52886420 None:intergenic 20.0%
!! GTCAAATGTTTCTTATAAAT+AGG - Chr1:52885537-52885556 None:intergenic 20.0%
!! TAAGACTTCATTATAATTCA+AGG - Chr1:52882830-52882849 None:intergenic 20.0%
!! TATGAAAGAATTAATGACAA+TGG + Chr1:52883002-52883021 MsG0180002912.01.T01:intron 20.0%
!! TATGAGTAATATTAATAGAG+AGG + Chr1:52881933-52881952 MsG0180002912.01.T01:intron 20.0%
!! TCAAATTTGAATACAATTTG+TGG + Chr1:52889034-52889053 MsG0180002912.01.T01:intron 20.0%
!! TCTATAATAAAGATTGTTGT+TGG + Chr1:52885893-52885912 MsG0180002912.01.T01:intron 20.0%
!! TCTTATTAGAACAATATAAG+CGG - Chr1:52889698-52889717 None:intergenic 20.0%
!! TGAAATTATGTCAAACTAAA+AGG + Chr1:52886603-52886622 MsG0180002912.01.T01:intron 20.0%
!! TGAATAATTTATGATGTGTT+CGG - Chr1:52888275-52888294 None:intergenic 20.0%
!! TGGTAATAAAAATGTATTAC+TGG + Chr1:52888819-52888838 MsG0180002912.01.T01:intron 20.0%
!! TTTATAATATTAGAAGAGGA+AGG - Chr1:52885274-52885293 None:intergenic 20.0%
!! TTTCTTATAAATAGGATCAA+AGG - Chr1:52885529-52885548 None:intergenic 20.0%
!! TTTCTTATTGGAATTTCTTA+TGG - Chr1:52881105-52881124 None:intergenic 20.0%
!! TTTGTTAATAAATATGCAAC+TGG + Chr1:52889934-52889953 MsG0180002912.01.T01:intron 20.0%
!!! AAACTTGTTTATACAAATTC+TGG + Chr1:52890962-52890981 MsG0180002912.01.T01:three_prime_UTR 20.0%
!!! AAATGATAATGATAATGATG+GGG + Chr1:52888242-52888261 MsG0180002912.01.T01:intron 20.0%
!!! AATTTATGTATTAGGTTGTT+CGG - Chr1:52885078-52885097 None:intergenic 20.0%
!!! ATATATGATGATGTTGTATT+AGG + Chr1:52883828-52883847 MsG0180002912.01.T01:intron 20.0%
!!! ATGATAACGATGAAAAAATA+GGG + Chr1:52882707-52882726 MsG0180002912.01.T01:intron 20.0%
!!! ATGGATTTTATTTTGCTTTA+TGG - Chr1:52880712-52880731 None:intergenic 20.0%
!!! ATTATTTCTAGGATGTTTTA+AGG - Chr1:52881707-52881726 None:intergenic 20.0%
!!! ATTTGAAACTTTGAAACTAA+AGG - Chr1:52886194-52886213 None:intergenic 20.0%
!!! CTAATTTTGACATATTGAAT+TGG - Chr1:52881383-52881402 None:intergenic 20.0%
!!! GTATTTAGAATACAACATAT+AGG + Chr1:52889422-52889441 MsG0180002912.01.T01:intron 20.0%
!!! TAATGTATCATATGTTTTGA+GGG + Chr1:52889011-52889030 MsG0180002912.01.T01:intron 20.0%
!!! TAATTGCTATGATAATGATA+AGG - Chr1:52887860-52887879 None:intergenic 20.0%
!!! TATTATCAATAACAGAGTTT+TGG - Chr1:52888086-52888105 None:intergenic 20.0%
!!! TGATTTTAGATAAACAATGA+CGG + Chr1:52885159-52885178 MsG0180002912.01.T01:intron 20.0%
!!! TGGATTTTATTTTGCTTTAT+GGG - Chr1:52880711-52880730 None:intergenic 20.0%
!!! TTATATTATTTCTATTGCAG+TGG + Chr1:52885435-52885454 MsG0180002912.01.T01:intron 20.0%
!!! TTTATATTTTAGAAATGGTG+AGG + Chr1:52883378-52883397 MsG0180002912.01.T01:intron 20.0%
!!! TTTTCCCTATTATTATGTTA+TGG + Chr1:52883971-52883990 MsG0180002912.01.T01:intron 20.0%
! AAAAGGAAAGGTAAGTTATT+GGG - Chr1:52884991-52885010 None:intergenic 25.0%
! AAACAACACAACAAATAAAG+GGG - Chr1:52884009-52884028 None:intergenic 25.0%
! AAACCAACTAATTCTTAGAA+GGG - Chr1:52889537-52889556 None:intergenic 25.0%
! AAAGATGATTGATATCAAAG+AGG + Chr1:52884594-52884613 MsG0180002912.01.T01:intron 25.0%
! AAATAATAGCGAGTTAAAGA+AGG + Chr1:52881720-52881739 MsG0180002912.01.T01:intron 25.0%
! AACTCAATCTTCTAATGATA+TGG - Chr1:52881534-52881553 None:intergenic 25.0%
! AAGATGATTGATATCAAAGA+GGG + Chr1:52884595-52884614 MsG0180002912.01.T01:intron 25.0%
! AATAGAAAGTGAGAGATATA+TGG + Chr1:52881903-52881922 MsG0180002912.01.T01:intron 25.0%
! AATTAGCAAGAACGATATAA+TGG + Chr1:52885927-52885946 MsG0180002912.01.T01:intron 25.0%
! ACGACAAGTATGATTTATTA+AGG + Chr1:52884269-52884288 MsG0180002912.01.T01:intron 25.0%
! AGATATGGAAATACTTTAGA+AGG + Chr1:52889881-52889900 MsG0180002912.01.T01:intron 25.0%
! AGGAAAGAAATGAAAATGAA+TGG + Chr1:52889378-52889397 MsG0180002912.01.T01:intron 25.0%
! AGGTAATTTCTCTTTCTTAT+TGG - Chr1:52881117-52881136 None:intergenic 25.0%
! AGTAATAAATTACACAGACA+CGG - Chr1:52888873-52888892 None:intergenic 25.0%
! ATATAACTAAATGAGGGAAT+GGG + Chr1:52881779-52881798 MsG0180002912.01.T01:intron 25.0%
! ATCTATATTCATGAGAAACA+AGG + Chr1:52881047-52881066 MsG0180002912.01.T01:intron 25.0%
! ATGAAAATGAATGGAATCTA+CGG + Chr1:52889387-52889406 MsG0180002912.01.T01:intron 25.0%
! ATGAAATATAAAAGTCAGAG+TGG - Chr1:52887316-52887335 None:intergenic 25.0%
! ATGATGTTATCTATAGTGAT+GGG + Chr1:52883427-52883446 MsG0180002912.01.T01:intron 25.0%
! ATGTTAGACAATAACGTATA+AGG + Chr1:52882558-52882577 MsG0180002912.01.T01:intron 25.0%
! ATTAAGCAATGAAAGATAGT+AGG + Chr1:52882680-52882699 MsG0180002912.01.T01:intron 25.0%
! ATTAGAACGAAGTTAAGATT+GGG + Chr1:52882902-52882921 MsG0180002912.01.T01:intron 25.0%
! ATTATAATGAAGTCTTAGTG+AGG + Chr1:52882833-52882852 MsG0180002912.01.T01:intron 25.0%
! ATTTAACAGAGCAAATAGTA+TGG + Chr1:52882345-52882364 MsG0180002912.01.T01:CDS 25.0%
! CACTTAAATTAGAATGAGAA+TGG + Chr1:52881960-52881979 MsG0180002912.01.T01:intron 25.0%
! CATCATCATATATATGCATA+TGG - Chr1:52883821-52883840 None:intergenic 25.0%
! CTTAAATTAGAATGAGAATG+GGG + Chr1:52881962-52881981 MsG0180002912.01.T01:intron 25.0%
! GAAAACAACACAACAAATAA+AGG - Chr1:52884011-52884030 None:intergenic 25.0%
! GAAAATGTGAAGAATTGATT+TGG - Chr1:52889989-52890008 None:intergenic 25.0%
! GAAACTTCATACTTATAGTA+TGG + Chr1:52888799-52888818 MsG0180002912.01.T01:intron 25.0%
! GATTACCATTCTAAATTTCT+CGG - Chr1:52882452-52882471 None:intergenic 25.0%
! GCTTATATTGTTCTAATAAG+AGG + Chr1:52889697-52889716 MsG0180002912.01.T01:intron 25.0%
! GGGAATTCTATTAAACTAAA+AGG - Chr1:52886164-52886183 None:intergenic 25.0%
! TAAAAGGAAAGGTAAGTTAT+TGG - Chr1:52884992-52885011 None:intergenic 25.0%
! TAATACGAATGTAAATGAAG+TGG - Chr1:52881442-52881461 None:intergenic 25.0%
! TACAATTAAGCGCAATAAAA+TGG - Chr1:52885324-52885343 None:intergenic 25.0%
! TATATAACTAAATGAGGGAA+TGG + Chr1:52881778-52881797 MsG0180002912.01.T01:intron 25.0%
! TATTTGGAGGAATGATATTT+AGG + Chr1:52889752-52889771 MsG0180002912.01.T01:intron 25.0%
! TCTACTTGTTTGAACTTTAT+AGG + Chr1:52889473-52889492 MsG0180002912.01.T01:intron 25.0%
! TTAAATCCTATAACCAGAAA+GGG - Chr1:52890944-52890963 None:intergenic 25.0%
! TTAATTATTAACTGACAGCA+GGG - Chr1:52886251-52886270 None:intergenic 25.0%
! TTATCAGACAAACAAAATAG+TGG + Chr1:52884935-52884954 MsG0180002912.01.T01:intron 25.0%
! TTCATTTCTTTCCTAAAAAG+AGG - Chr1:52889372-52889391 None:intergenic 25.0%
! TTGTTAAAGCATAAAAGGAA+AGG - Chr1:52885003-52885022 None:intergenic 25.0%
! TTTAAATCCTATAACCAGAA+AGG - Chr1:52890945-52890964 None:intergenic 25.0%
! TTTAACAGAGCAAATAGTAT+GGG + Chr1:52882346-52882365 MsG0180002912.01.T01:CDS 25.0%
! TTTCTCAAATTCTAAATCCA+AGG + Chr1:52881479-52881498 MsG0180002912.01.T01:intron 25.0%
!! AATGATAATGATAATGATGG+GGG + Chr1:52888243-52888262 MsG0180002912.01.T01:intron 25.0%
!! AATGCAAAGTTGTTCATTTT+GGG + Chr1:52886942-52886961 MsG0180002912.01.T01:intron 25.0%
!! ACTTTGGATTAAATTTTTGC+TGG - Chr1:52880775-52880794 None:intergenic 25.0%
!! ATGTTATGTTATGATGATGA+CGG - Chr1:52887599-52887618 None:intergenic 25.0%
!! ATTTTCTTCTTCTTCTTCAA+TGG + Chr1:52884305-52884324 MsG0180002912.01.T01:intron 25.0%
!! GACACTCTGTTTTATATTTA+CGG - Chr1:52889350-52889369 None:intergenic 25.0%
!! GATGATAACGATGAAAAAAT+AGG + Chr1:52882706-52882725 MsG0180002912.01.T01:intron 25.0%
!! GCTTATTTATCATTTTGCTT+CGG - Chr1:52885240-52885259 None:intergenic 25.0%
!! GTAATGTATCATATGTTTTG+AGG + Chr1:52889010-52889029 MsG0180002912.01.T01:intron 25.0%
!! TAATTTGTAGCAACTAGTTT+AGG + Chr1:52891033-52891052 MsG0180002912.01.T01:three_prime_UTR 25.0%
!! TAGTTATTGATGATTATGGA+TGG - Chr1:52889567-52889586 None:intergenic 25.0%
!! TGTCAGTAATGCTTAATTTT+AGG - Chr1:52889627-52889646 None:intergenic 25.0%
!! TTTAACTCGCTATTATTTCT+AGG - Chr1:52881718-52881737 None:intergenic 25.0%
!!! ATTTAAGCTTGTTATTATCG+TGG - Chr1:52881830-52881849 None:intergenic 25.0%
!!! ATTTGGTGTTATTTGTAACT+GGG - Chr1:52887508-52887527 None:intergenic 25.0%
!!! ATTTTGACATATTGAATTGG+TGG - Chr1:52881380-52881399 None:intergenic 25.0%
!!! CTGAGATCATAATTTTTCAA+TGG + Chr1:52882142-52882161 MsG0180002912.01.T01:intron 25.0%
!!! CTGATTTGTTAAAGCATAAA+AGG - Chr1:52885008-52885027 None:intergenic 25.0%
!!! GAATGTTTGAGACTTTTATT+TGG + Chr1:52890257-52890276 MsG0180002912.01.T01:intron 25.0%
!!! GATATTAGATCGTTTTATTG+AGG + Chr1:52882971-52882990 MsG0180002912.01.T01:intron 25.0%
!!! TATTTGATTTCATGTCGTTT+TGG + Chr1:52888199-52888218 MsG0180002912.01.T01:intron 25.0%
!!! TATTTGGTGTTATTTGTAAC+TGG - Chr1:52887509-52887528 None:intergenic 25.0%
!!! TGTTTTTTTTGCTGATAAGT+CGG - Chr1:52890625-52890644 None:intergenic 25.0%
!!! TTTAAGCTTGTTATTATCGT+GGG - Chr1:52881829-52881848 None:intergenic 25.0%
!!! TTTTAGGAATAAACAGAGAA+AGG - Chr1:52889611-52889630 None:intergenic 25.0%
!!! TTTTTTACTCTTTCCCTTAA+CGG - Chr1:52882510-52882529 None:intergenic 25.0%
AAAACCTCAAGAGTAACATA+AGG + Chr1:52880647-52880666 MsG0180002912.01.T01:intron 30.0%
AAACTGTTAAGGCTCAAATA+TGG + Chr1:52888106-52888125 MsG0180002912.01.T01:intron 30.0%
AAAGGAAAGGTAAGTTATTG+GGG - Chr1:52884990-52885009 None:intergenic 30.0%
AAATGACCAAACGTAGTATT+TGG - Chr1:52886092-52886111 None:intergenic 30.0%
AACCGTCATAATATTCCTAA+AGG - Chr1:52880533-52880552 None:intergenic 30.0%
AACTGTTAAGGCTCAAATAT+GGG + Chr1:52888107-52888126 MsG0180002912.01.T01:intron 30.0%
AAGAATTAATGACAATGGTG+AGG + Chr1:52883007-52883026 MsG0180002912.01.T01:intron 30.0%
AAGAGAAGCAAATTTACCAT+AGG + Chr1:52887619-52887638 MsG0180002912.01.T01:intron 30.0%
AAGTTTCCAACAATGTTTAG+TGG - Chr1:52888786-52888805 None:intergenic 30.0%
AAGTTTCTTAACATGAACCT+CGG - Chr1:52887034-52887053 None:intergenic 30.0%
AATCCACGACAATAAGAAAT+AGG - Chr1:52886702-52886721 None:intergenic 30.0%
ACTGAGAAATTTGGTTGTAA+GGG + Chr1:52888635-52888654 MsG0180002912.01.T01:intron 30.0%
ACTGTACTTGCAAAAAAGTA+CGG + Chr1:52880236-52880255 MsG0180002912.01.T01:CDS 30.0%
AGATAAGGTGGTGATATAAA+CGG + Chr1:52883252-52883271 MsG0180002912.01.T01:intron 30.0%
AGGAATAGGATATGATATCA+AGG + Chr1:52883105-52883124 MsG0180002912.01.T01:intron 30.0%
ATAAACAATGACGGCATTAT+TGG + Chr1:52885168-52885187 MsG0180002912.01.T01:intron 30.0%
ATAATTTATGATGTGTTCGG+AGG - Chr1:52888272-52888291 None:intergenic 30.0%
ATATTGTAACACTAGGGTTA+GGG + Chr1:52884174-52884193 MsG0180002912.01.T01:intron 30.0%
ATATTTATCGTCGGGAAAAT+AGG + Chr1:52884422-52884441 MsG0180002912.01.T01:intron 30.0%
ATCTTCTAATGATATGGAAG+TGG - Chr1:52881528-52881547 None:intergenic 30.0%
ATGTATAAATATGCAAGCTC+TGG - Chr1:52887231-52887250 None:intergenic 30.0%
ATGTTGTGTGATATAGTTGT+GGG + Chr1:52889082-52889101 MsG0180002912.01.T01:intron 30.0%
CAAAATGAACAACTTTGCAT+TGG - Chr1:52886943-52886962 None:intergenic 30.0%
CAAACCAACTAATTCTTAGA+AGG - Chr1:52889538-52889557 None:intergenic 30.0%
CAACATGCAACAATTGATAA+AGG - Chr1:52889068-52889087 None:intergenic 30.0%
CATAGGATGTCGAATTTATA+CGG + Chr1:52887917-52887936 MsG0180002912.01.T01:intron 30.0%
CCATAAGTAGTAATACAATG+AGG + Chr1:52888939-52888958 MsG0180002912.01.T01:intron 30.0%
CCTCATTGTATTACTACTTA+TGG - Chr1:52888942-52888961 None:intergenic 30.0%
CCTGCCATAACATAATAATA+GGG - Chr1:52883978-52883997 None:intergenic 30.0%
GAATAAACAGAGAAAGGAAA+GGG - Chr1:52889605-52889624 None:intergenic 30.0%
GATCAAAACGTTACGTTTAA+TGG + Chr1:52886304-52886323 MsG0180002912.01.T01:intron 30.0%
GATGATGTTATCTATAGTGA+TGG + Chr1:52883426-52883445 MsG0180002912.01.T01:intron 30.0%
GATTAGAACGAAGTTAAGAT+TGG + Chr1:52882901-52882920 MsG0180002912.01.T01:intron 30.0%
GCCAAAGATAAATGAAAAGA+AGG - Chr1:52890161-52890180 None:intergenic 30.0%
GGTAAAAATTATCCAGTGAA+AGG + Chr1:52885948-52885967 MsG0180002912.01.T01:intron 30.0%
GTATTACTTGTGTCAACAAA+TGG + Chr1:52888467-52888486 MsG0180002912.01.T01:intron 30.0%
GTGTAAAACGATGATAATAG+AGG + Chr1:52882407-52882426 MsG0180002912.01.T01:intron 30.0%
GTGTCTGTGTAATTTATTAC+TGG + Chr1:52888872-52888891 MsG0180002912.01.T01:intron 30.0%
GTTAATTATTAACTGACAGC+AGG - Chr1:52886252-52886271 None:intergenic 30.0%
GTTGACGATAATAATAACGA+CGG + Chr1:52882788-52882807 MsG0180002912.01.T01:intron 30.0%
GTTGGATTAATGAAGAGATA+AGG + Chr1:52883237-52883256 MsG0180002912.01.T01:intron 30.0%
TAAGAAAACATCTTGAGACT+AGG + Chr1:52883078-52883097 MsG0180002912.01.T01:intron 30.0%
TAAGGAATACTAGGATTCTA+GGG + Chr1:52880259-52880278 MsG0180002912.01.T01:CDS 30.0%
TAAGTAGTAATACAATGAGG+TGG + Chr1:52888942-52888961 MsG0180002912.01.T01:intron 30.0%
TAATTTATGATGTGTTCGGA+GGG - Chr1:52888271-52888290 None:intergenic 30.0%
TACTGAGAAATTTGGTTGTA+AGG + Chr1:52888634-52888653 MsG0180002912.01.T01:intron 30.0%
TAGTATTTATAGCCTGCTAT+GGG + Chr1:52880323-52880342 MsG0180002912.01.T01:CDS 30.0%
TATTCCAATTAACCTTTCAC+TGG - Chr1:52885963-52885982 None:intergenic 30.0%
TATTTATCGTCGGGAAAATA+GGG + Chr1:52884423-52884442 MsG0180002912.01.T01:intron 30.0%
TCCTGCCATAACATAATAAT+AGG - Chr1:52883979-52883998 None:intergenic 30.0%
TGTATAAATATGCAAGCTCT+GGG - Chr1:52887230-52887249 None:intergenic 30.0%
TTATCCAGTGAAAGGTTAAT+TGG + Chr1:52885956-52885975 MsG0180002912.01.T01:intron 30.0%
TTATGACGGTTCAATCATAA+AGG + Chr1:52880542-52880561 MsG0180002912.01.T01:intron 30.0%
TTATGCTTATGATGGTACTA+AGG - Chr1:52880621-52880640 None:intergenic 30.0%
TTCTGTTAGAATAGTCAGAA+AGG - Chr1:52890597-52890616 None:intergenic 30.0%
TTGAAACTAAAGGACTTAGT+GGG - Chr1:52886184-52886203 None:intergenic 30.0%
TTGGATGAAAGATGTAGTAA+TGG + Chr1:52881993-52882012 MsG0180002912.01.T01:intron 30.0%
TTTCTTATAAATAGGACCGT+AGG + Chr1:52885642-52885661 MsG0180002912.01.T01:intron 30.0%
! AAACTTCTTTTCACCTCTTT+TGG + Chr1:52885688-52885707 MsG0180002912.01.T01:intron 30.0%
! AAAGTTTGTGTTTTGTGTTG+AGG - Chr1:52887810-52887829 None:intergenic 30.0%
! AAATGGTGTCAAATCTGTTA+TGG - Chr1:52880908-52880927 None:intergenic 30.0%
! AACTTCTTTTCACCTCTTTT+GGG + Chr1:52885689-52885708 MsG0180002912.01.T01:intron 30.0%
! AAGAAGTTGTGTTTTTCCAA+CGG - Chr1:52887999-52888018 None:intergenic 30.0%
! AAGAGAGAACCTTTTCTTTA+TGG + Chr1:52890535-52890554 MsG0180002912.01.T01:three_prime_UTR 30.0%
! AATTTCTATACGCTCTCTTT+TGG - Chr1:52888368-52888387 None:intergenic 30.0%
! AGCCTTTAGGAATATTATGA+CGG + Chr1:52880528-52880547 MsG0180002912.01.T01:intron 30.0%
! ATCAGATGTTGAAGATCTTT+TGG - Chr1:52881162-52881181 None:intergenic 30.0%
! ATGATAATGATAATGATGGG+GGG + Chr1:52888244-52888263 MsG0180002912.01.T01:intron 30.0%
! CAATGCAAAGTTGTTCATTT+TGG + Chr1:52886941-52886960 MsG0180002912.01.T01:intron 30.0%
! CATGTCTAAACAATTTCTAG+TGG + Chr1:52890026-52890045 MsG0180002912.01.T01:intron 30.0%
! CTGATTAATGTTTTGCTAGA+TGG - Chr1:52880949-52880968 None:intergenic 30.0%
! CTTCTAAGAATTAGTTGGTT+TGG + Chr1:52889536-52889555 MsG0180002912.01.T01:intron 30.0%
! CTTTTCCGAGAAATTTAGAA+TGG + Chr1:52882444-52882463 MsG0180002912.01.T01:intron 30.0%
! GACACCATGAAACTTTTAAA+AGG + Chr1:52886448-52886467 MsG0180002912.01.T01:intron 30.0%
! GCCTTCTTTTCATTTATCTT+TGG + Chr1:52890157-52890176 MsG0180002912.01.T01:intron 30.0%
! GGGATAGTTATTGATGATTA+TGG - Chr1:52889571-52889590 None:intergenic 30.0%
! TCGATTTTCGATATAACCTA+TGG - Chr1:52887638-52887657 None:intergenic 30.0%
! TCTTTTATCGATGAGTTACA+AGG + Chr1:52889312-52889331 MsG0180002912.01.T01:intron 30.0%
! TGGATTAAATTTTTGCTGGA+TGG - Chr1:52880771-52880790 None:intergenic 30.0%
! TTATGTTACTCTTGAGGTTT+TGG - Chr1:52880648-52880667 None:intergenic 30.0%
! TTCTTATCATAGTTTGTCAG+AGG - Chr1:52883725-52883744 None:intergenic 30.0%
! TTTGAAACTAAAGGACTTAG+TGG - Chr1:52886185-52886204 None:intergenic 30.0%
!! AAAGAAGGTGTTAATGTAGA+GGG + Chr1:52881735-52881754 MsG0180002912.01.T01:intron 30.0%
!! ATTGATTTTGGATATGGTTC+AGG + Chr1:52887290-52887309 MsG0180002912.01.T01:intron 30.0%
!! CTATGGATTGATTTTGGATA+TGG + Chr1:52887284-52887303 MsG0180002912.01.T01:intron 30.0%
!! GCTACCTTTTAAAAGTTTCA+TGG - Chr1:52886455-52886474 None:intergenic 30.0%
!! GTAGCTTTAAGTTGTTAACT+TGG + Chr1:52886282-52886301 MsG0180002912.01.T01:intron 30.0%
!! GTTGATTCTAAAGCTACAAT+TGG + Chr1:52888046-52888065 MsG0180002912.01.T01:CDS 30.0%
!! TAAAGAAGGTGTTAATGTAG+AGG + Chr1:52881734-52881753 MsG0180002912.01.T01:intron 30.0%
!! TTAAGCTTGTTATTATCGTG+GGG - Chr1:52881828-52881847 None:intergenic 30.0%
!!! AGTTAATTTTGGTTGTTGGA+TGG - Chr1:52880745-52880764 None:intergenic 30.0%
!!! ATGTTTTAAGGTCCATTGAA+GGG - Chr1:52881695-52881714 None:intergenic 30.0%
!!! ATTAAATTGCCTGCTGATTT+TGG - Chr1:52880826-52880845 None:intergenic 30.0%
!!! CATACCATTTCCTTATTTTC+TGG + Chr1:52890918-52890937 MsG0180002912.01.T01:three_prime_UTR 30.0%
!!! GACTAGTTAATTTTGGTTGT+TGG - Chr1:52880749-52880768 None:intergenic 30.0%
!!! GATGATGACGGTTTTTTTTA+GGG - Chr1:52887587-52887606 None:intergenic 30.0%
!!! TACTTTTTTGCAAGTACAGT+TGG - Chr1:52880236-52880255 None:intergenic 30.0%
!!! TGATGATGACGGTTTTTTTT+AGG - Chr1:52887588-52887607 None:intergenic 30.0%
AAAGTACGGTAAGGAATACT+AGG + Chr1:52880250-52880269 MsG0180002912.01.T01:CDS 35.0%
AAAGTGCGAGATAATGACAT+CGG + Chr1:52884693-52884712 MsG0180002912.01.T01:intron 35.0%
AACGAAGTTAAGATTGGGAA+TGG + Chr1:52882907-52882926 MsG0180002912.01.T01:intron 35.0%
AAGGAAAGGGAAAGTGATAA+TGG - Chr1:52889592-52889611 None:intergenic 35.0%
AATCATTTGATCACATGGCA+AGG + Chr1:52890392-52890411 MsG0180002912.01.T01:CDS 35.0%
AATGTAGAGGGTAAGAGTAA+GGG + Chr1:52881747-52881766 MsG0180002912.01.T01:intron 35.0%
AATTGGCAACAAGTGTGATT+TGG + Chr1:52890466-52890485 MsG0180002912.01.T01:exon 35.0%
ACATCTTGAGACTAGGAATT+AGG + Chr1:52883085-52883104 MsG0180002912.01.T01:intron 35.0%
ACGAAATGTAAGGGAAGATA+AGG + Chr1:52882649-52882668 MsG0180002912.01.T01:intron 35.0%
ACTCTACCAAAATGATGAGT+AGG + Chr1:52883760-52883779 MsG0180002912.01.T01:intron 35.0%
AGACATGCAACCAATATGTA+TGG - Chr1:52890013-52890032 None:intergenic 35.0%
AGGAAAGGGAAAGTGATAAT+GGG - Chr1:52889591-52889610 None:intergenic 35.0%
AGGAAGAACCTAGTTATGTA+GGG + Chr1:52883027-52883046 MsG0180002912.01.T01:intron 35.0%
ATAAAACTTGTGTGCCAAAG+AGG + Chr1:52888739-52888758 MsG0180002912.01.T01:intron 35.0%
ATCTCTACCGAGAAATCTAT+TGG - Chr1:52888679-52888698 None:intergenic 35.0%
ATGCATAAACATGCAATGTC+TGG - Chr1:52888549-52888568 None:intergenic 35.0%
ATGGAAACAGTGTAACTTAC+TGG + Chr1:52891003-52891022 MsG0180002912.01.T01:three_prime_UTR 35.0%
ATGTTAGAGGTGAGGATAAA+TGG + Chr1:52884496-52884515 MsG0180002912.01.T01:intron 35.0%
ATTGGCAACAAGTGTGATTT+GGG + Chr1:52890467-52890486 MsG0180002912.01.T01:exon 35.0%
CAATCTCATCAGCAAAATGT+AGG + Chr1:52890856-52890875 MsG0180002912.01.T01:three_prime_UTR 35.0%
CACTGGAAAACAGAACTAAA+CGG - Chr1:52884122-52884141 None:intergenic 35.0%
CATGTTGTGTGATATAGTTG+TGG + Chr1:52889081-52889100 MsG0180002912.01.T01:intron 35.0%
CCCTATTATTATGTTATGGC+AGG + Chr1:52883975-52883994 MsG0180002912.01.T01:intron 35.0%
CGCATAAGAAATAGGATAAG+AGG + Chr1:52882751-52882770 MsG0180002912.01.T01:intron 35.0%
CGTAAGTTCTTTAACTACCT+TGG - Chr1:52882534-52882553 None:intergenic 35.0%
CTAAACTCATTACTGGGTTA+AGG - Chr1:52882482-52882501 None:intergenic 35.0%
CTACATGAATATTCTCACAC+TGG - Chr1:52884139-52884158 None:intergenic 35.0%
CTGATGTCTCCATAAAGAAA+AGG - Chr1:52890547-52890566 None:intergenic 35.0%
CTTAACCCAGTAATGAGTTT+AGG + Chr1:52882480-52882499 MsG0180002912.01.T01:intron 35.0%
CTTCATTAATCCAACCCTTA+CGG - Chr1:52883232-52883251 None:intergenic 35.0%
GATAATAGAGGATGTGAAGT+AGG + Chr1:52882419-52882438 MsG0180002912.01.T01:intron 35.0%
GATATTGTAACACTAGGGTT+AGG + Chr1:52884173-52884192 MsG0180002912.01.T01:intron 35.0%
GCATTCCTAAACTCATTACT+GGG - Chr1:52882488-52882507 None:intergenic 35.0%
GCTAATCAGCATCAGTTAAA+CGG + Chr1:52886501-52886520 MsG0180002912.01.T01:intron 35.0%
GCTCTGATATTGTAACACTA+GGG + Chr1:52884168-52884187 MsG0180002912.01.T01:intron 35.0%
GGAATAAACAGAGAAAGGAA+AGG - Chr1:52889606-52889625 None:intergenic 35.0%
GGATTAATGAAGAGATAAGG+TGG + Chr1:52883240-52883259 MsG0180002912.01.T01:intron 35.0%
GGGAAAGAGTAAAAAATCCA+AGG + Chr1:52882514-52882533 MsG0180002912.01.T01:intron 35.0%
GTAACTGAGTACATATACTC+AGG + Chr1:52884043-52884062 MsG0180002912.01.T01:intron 35.0%
GTAAGGAATACTAGGATTCT+AGG + Chr1:52880258-52880277 MsG0180002912.01.T01:CDS 35.0%
GTAGTATTTATAGCCTGCTA+TGG + Chr1:52880322-52880341 MsG0180002912.01.T01:CDS 35.0%
GTATAAATATGCAAGCTCTG+GGG - Chr1:52887229-52887248 None:intergenic 35.0%
GTCGTTAAGACGAAATGTAA+GGG + Chr1:52882640-52882659 MsG0180002912.01.T01:intron 35.0%
GTGAGAATCTAATGATGTCA+AGG + Chr1:52881871-52881890 MsG0180002912.01.T01:intron 35.0%
GTTGATTGAGAGTAATGATG+AGG + Chr1:52883274-52883293 MsG0180002912.01.T01:intron 35.0%
GTTGTTTAATAGTGCGAGAA+AGG + Chr1:52886356-52886375 MsG0180002912.01.T01:intron 35.0%
TAAAAACACAACCCACATGT+AGG - Chr1:52890824-52890843 None:intergenic 35.0%
TAATGTAGAGGGTAAGAGTA+AGG + Chr1:52881746-52881765 MsG0180002912.01.T01:intron 35.0%
TACTCCTTATGTTACTCTTG+AGG - Chr1:52880654-52880673 None:intergenic 35.0%
TAGAACAATATAAGCGGCAA+TGG - Chr1:52889692-52889711 None:intergenic 35.0%
TAGTCACCACTAAACATTGT+TGG + Chr1:52888777-52888796 MsG0180002912.01.T01:intron 35.0%
TCTAAGTAACCTACATCGTT+CGG + Chr1:52890096-52890115 MsG0180002912.01.T01:intron 35.0%
TCTATTCTCTCCTCTATTCT+AGG - Chr1:52883148-52883167 None:intergenic 35.0%
TCTCCTTCAAAAAACCTCTT+TGG - Chr1:52888756-52888775 None:intergenic 35.0%
TCTCTACCGAGAAATCTATT+GGG - Chr1:52888678-52888697 None:intergenic 35.0%
TCTGTTATGGTATGATCTTG+TGG - Chr1:52880895-52880914 None:intergenic 35.0%
TCTTCAACATCTGATGCAAT+TGG + Chr1:52881167-52881186 MsG0180002912.01.T01:intron 35.0%
TGAAGTAGGTTATGTTGAGT+AGG + Chr1:52882244-52882263 MsG0180002912.01.T01:intron 35.0%
TGACATATTGAATTGGTGGA+AGG - Chr1:52881376-52881395 None:intergenic 35.0%
TGAGAATGGGGTATACTATT+TGG + Chr1:52881974-52881993 MsG0180002912.01.T01:intron 35.0%
TGAGACTAGGAATTAGGAAT+AGG + Chr1:52883091-52883110 MsG0180002912.01.T01:intron 35.0%
TGATATCAAAGAGGGACAAT+GGG + Chr1:52884603-52884622 MsG0180002912.01.T01:intron 35.0%
TGTTAGAATAGTCAGAAAGG+CGG - Chr1:52890594-52890613 None:intergenic 35.0%
TTATAGAGAGCCTAGAATAG+AGG + Chr1:52883135-52883154 MsG0180002912.01.T01:intron 35.0%
TTCATTAATCCAACCCTTAC+GGG - Chr1:52883231-52883250 None:intergenic 35.0%
TTGAGTAGGAGTTAAAGCAT+TGG + Chr1:52882258-52882277 MsG0180002912.01.T01:intron 35.0%
TTGATATCAAAGAGGGACAA+TGG + Chr1:52884602-52884621 MsG0180002912.01.T01:intron 35.0%
TTGGTCAGTTATGCTTATGA+TGG - Chr1:52880629-52880648 None:intergenic 35.0%
TTGGTTAGGAACAATTATCC+TGG - Chr1:52890703-52890722 None:intergenic 35.0%
TTTCTTTCTGTATGGGTCAA+AGG - Chr1:52887748-52887767 None:intergenic 35.0%
! AAGGTTGATCTTTGATCTTG+TGG - Chr1:52880602-52880621 None:intergenic 35.0%
! ACTTGCAAAAAAGTACGGTA+AGG + Chr1:52880241-52880260 MsG0180002912.01.T01:CDS 35.0%
! AGATGTTGAAGATCTTTTGG+AGG - Chr1:52881159-52881178 None:intergenic 35.0%
! AGCTCTGATATTGTAACACT+AGG + Chr1:52884167-52884186 MsG0180002912.01.T01:intron 35.0%
! AGCTGATTGACACCAATTTT+GGG + Chr1:52881190-52881209 MsG0180002912.01.T01:intron 35.0%
! AGGTTTCTAGAAGCTTAGAA+GGG + Chr1:52880410-52880429 MsG0180002912.01.T01:intron 35.0%
! AGTGGAAGAACTTGATGTTT+TGG - Chr1:52881510-52881529 None:intergenic 35.0%
! CAAAAGTTTTCTCACGGAAT+TGG - Chr1:52884967-52884986 None:intergenic 35.0%
! CACATTTTCGCCATACATAT+TGG + Chr1:52890000-52890019 MsG0180002912.01.T01:intron 35.0%
! GATCGATTACGTTTTCAAAG+TGG + Chr1:52887955-52887974 MsG0180002912.01.T01:CDS 35.0%
! GTAGAGTGCTAAATTGTTAC+AGG - Chr1:52881256-52881275 None:intergenic 35.0%
! GTCAAATAAGGGTGTATAGT+GGG + Chr1:52884852-52884871 MsG0180002912.01.T01:intron 35.0%
! TATAAATATGCAAGCTCTGG+GGG - Chr1:52887228-52887247 None:intergenic 35.0%
! TCAAATAAGGGTGTATAGTG+GGG + Chr1:52884853-52884872 MsG0180002912.01.T01:intron 35.0%
! TCATGTTACTTGTGTCCTAA+GGG - Chr1:52887160-52887179 None:intergenic 35.0%
! TCTCCCTTCTAAGAATTAGT+TGG + Chr1:52889531-52889550 MsG0180002912.01.T01:intron 35.0%
! TGAAGTGGATTTGTATCTCA+TGG - Chr1:52881427-52881446 None:intergenic 35.0%
! TGAGTAGGAGTTAAAGCATT+GGG + Chr1:52882259-52882278 MsG0180002912.01.T01:intron 35.0%
! TGTCAAATAAGGGTGTATAG+TGG + Chr1:52884851-52884870 MsG0180002912.01.T01:intron 35.0%
! TTGAATGAAGGTGTGTTTGA+TGG + Chr1:52888413-52888432 MsG0180002912.01.T01:intron 35.0%
!! AAACAGAGTGTCCTCTTTTT+AGG + Chr1:52889358-52889377 MsG0180002912.01.T01:intron 35.0%
!! ACAATTTCTAGTGGTGCAAT+TGG + Chr1:52890035-52890054 MsG0180002912.01.T01:intron 35.0%
!! CATTAGTTTGTGCCCAAAAT+TGG - Chr1:52881205-52881224 None:intergenic 35.0%
!! GAGACTTTTATTTGGTACTC+TGG + Chr1:52890265-52890284 MsG0180002912.01.T01:intron 35.0%
!! GCATCTCTATGGATTGATTT+TGG + Chr1:52887278-52887297 MsG0180002912.01.T01:intron 35.0%
!! GGGTATTTGTGTATTTTAGG+TGG + Chr1:52880380-52880399 MsG0180002912.01.T01:intron 35.0%
!! GTATTTTAGGTGGTTTCTAG+AGG + Chr1:52880390-52880409 MsG0180002912.01.T01:intron 35.0%
!! GTTGGATGGACTAGTTATTA+TGG - Chr1:52880731-52880750 None:intergenic 35.0%
!! TACATATACTCAGGTTGACT+AGG + Chr1:52884052-52884071 MsG0180002912.01.T01:intron 35.0%
!! TTAAAGCATTGGGTAAGGTT+GGG + Chr1:52882269-52882288 MsG0180002912.01.T01:CDS 35.0%
!! TTGCTTGTTGTGATCTTCTT+GGG + Chr1:52890773-52890792 MsG0180002912.01.T01:three_prime_UTR 35.0%
!!! CAGGGGTATTTGTGTATTTT+AGG + Chr1:52880377-52880396 MsG0180002912.01.T01:intron 35.0%
!!! CTGGATGGACTAGTTAATTT+TGG - Chr1:52880756-52880775 None:intergenic 35.0%
!!! GATGTTTTAAGGTCCATTGA+AGG - Chr1:52881696-52881715 None:intergenic 35.0%
!!! GTTCTTGAGGTTTTATTTGG+AGG + Chr1:52889739-52889758 MsG0180002912.01.T01:intron 35.0%
!!! GTTTTCAAAGTGGTGTTGAT+TGG + Chr1:52887965-52887984 MsG0180002912.01.T01:CDS 35.0%
!!! TCTTTTTATTTGGTGATGGC+CGG + Chr1:52888503-52888522 MsG0180002912.01.T01:intron 35.0%
!!! TGTTTTAAGGTCCATTGAAG+GGG - Chr1:52881694-52881713 None:intergenic 35.0%
!!! TTGATGTTTTGGAAAAGCCT+TGG - Chr1:52881499-52881518 None:intergenic 35.0%
!!! TTGTTGTGTTGTTTTCTGTG+TGG + Chr1:52884015-52884034 MsG0180002912.01.T01:intron 35.0%
!!! TTTTTTTGACCGAACGATGT+AGG - Chr1:52890108-52890127 None:intergenic 35.0%
AACACTTACTGCCAATGATG+AGG + Chr1:52890641-52890660 MsG0180002912.01.T01:three_prime_UTR 40.0%
AAGAACCTAGTTATGTAGGG+AGG + Chr1:52883030-52883049 MsG0180002912.01.T01:intron 40.0%
AAGAAGGCAACATACGATGT+AGG - Chr1:52890145-52890164 None:intergenic 40.0%
AATCTATTGGGCACACAAGA+TGG - Chr1:52888666-52888685 None:intergenic 40.0%
AATGACATCGGTAAGATGTG+AGG + Chr1:52884705-52884724 MsG0180002912.01.T01:intron 40.0%
ACCAAAATGATGAGTAGGAG+TGG + Chr1:52883765-52883784 MsG0180002912.01.T01:intron 40.0%
ACCTAAGCTAATGCAGAAGA+AGG - Chr1:52890187-52890206 None:intergenic 40.0%
ACTTGTGTCAACAAATGGCA+AGG + Chr1:52888472-52888491 MsG0180002912.01.T01:intron 40.0%
AGAAAAAGTCAGCCCAAAAG+AGG - Chr1:52885704-52885723 None:intergenic 40.0%
AGAACCTAGTTATGTAGGGA+GGG + Chr1:52883031-52883050 MsG0180002912.01.T01:intron 40.0%
AGATCACAACAAGCAAGAGT+AGG - Chr1:52890769-52890788 None:intergenic 40.0%
AGATGATCGTAAACGATGAG+AGG + Chr1:52882617-52882636 MsG0180002912.01.T01:intron 40.0%
AGATTGGGAATGCTTGACTT+TGG - Chr1:52880791-52880810 None:intergenic 40.0%
AGGGCCAGAAAATAAGGAAA+TGG - Chr1:52890925-52890944 None:intergenic 40.0%
AGGTCTATCATCATCTTAGC+GGG + Chr1:52889717-52889736 MsG0180002912.01.T01:intron 40.0%
ATCTATTGGGCACACAAGAT+GGG - Chr1:52888665-52888684 None:intergenic 40.0%
ATCTCTCACTTTCTATTGCC+AGG - Chr1:52881900-52881919 None:intergenic 40.0%
ATGACATCGGTAAGATGTGA+GGG + Chr1:52884706-52884725 MsG0180002912.01.T01:intron 40.0%
ATGCATGTCCTAATCTCACA+AGG + Chr1:52889212-52889231 MsG0180002912.01.T01:intron 40.0%
ATTACTGGTGTCTATGCGTA+AGG + Chr1:52888834-52888853 MsG0180002912.01.T01:intron 40.0%
ATTTGATCACATGGCAAGGA+TGG + Chr1:52890396-52890415 MsG0180002912.01.T01:CDS 40.0%
CAACACATCTCTAGCAACTT+GGG + Chr1:52881324-52881343 MsG0180002912.01.T01:intron 40.0%
CAAGACTCATCTGTTAGGAT+TGG + Chr1:52889255-52889274 MsG0180002912.01.T01:intron 40.0%
CAATCCTAACAGATGAGTCT+TGG - Chr1:52889257-52889276 None:intergenic 40.0%
CACCTCTAACATGTCAGATA+TGG - Chr1:52884488-52884507 None:intergenic 40.0%
CGACATTCTTATAGGTCGTT+AGG + Chr1:52883790-52883809 MsG0180002912.01.T01:intron 40.0%
CTAATGCTTCAACTGTCCTT+TGG + Chr1:52881219-52881238 MsG0180002912.01.T01:intron 40.0%
CTCCATATCTGACATGTTAG+AGG + Chr1:52884483-52884502 MsG0180002912.01.T01:intron 40.0%
CTCTCTCATCTCACTAGATT+TGG - Chr1:52884554-52884573 None:intergenic 40.0%
CTTAGGCCAAATACTACGTT+TGG + Chr1:52886083-52886102 MsG0180002912.01.T01:intron 40.0%
CTTGTGTCAACAAATGGCAA+GGG + Chr1:52888473-52888492 MsG0180002912.01.T01:intron 40.0%
GACGACGTTTCTTTCTGTAT+GGG - Chr1:52887755-52887774 None:intergenic 40.0%
GACTTAGAACAACTGGAACT+AGG - Chr1:52881137-52881156 None:intergenic 40.0%
GAGCAAGACGCATAAGAAAT+AGG + Chr1:52882743-52882762 MsG0180002912.01.T01:intron 40.0%
GAGGAAGAACCTAGTTATGT+AGG + Chr1:52883026-52883045 MsG0180002912.01.T01:intron 40.0%
GAGGTCTATCATCATCTTAG+CGG + Chr1:52889716-52889735 MsG0180002912.01.T01:intron 40.0%
GAGTGGTACGACATTCTTAT+AGG + Chr1:52883782-52883801 MsG0180002912.01.T01:intron 40.0%
GAGTTTAGGAATGCCGTTAA+GGG + Chr1:52882494-52882513 MsG0180002912.01.T01:intron 40.0%
GATAAATGGCGAAAACGACA+TGG + Chr1:52884510-52884529 MsG0180002912.01.T01:intron 40.0%
GATATAGTTGTGGGTGCTTT+GGG + Chr1:52889091-52889110 MsG0180002912.01.T01:intron 40.0%
GATGATCGTAAACGATGAGA+GGG + Chr1:52882618-52882637 MsG0180002912.01.T01:intron 40.0%
GCAAAACACCACTAAATGCA+CGG - Chr1:52883597-52883616 None:intergenic 40.0%
GCGTCAATCATTTGATCACA+TGG + Chr1:52890387-52890406 MsG0180002912.01.T01:CDS 40.0%
GGAAAAACATAGCATGACTC+AGG - Chr1:52881656-52881675 None:intergenic 40.0%
GGAAAACAGAACTAAACGGA+GGG - Chr1:52884118-52884137 None:intergenic 40.0%
GGCATTCCTAAACTCATTAC+TGG - Chr1:52882489-52882508 None:intergenic 40.0%
GGGTCTTTAAGCAAGTGTAT+GGG + Chr1:52888610-52888629 MsG0180002912.01.T01:intron 40.0%
GGTCGTTAAGACGAAATGTA+AGG + Chr1:52882639-52882658 MsG0180002912.01.T01:intron 40.0%
GGTCTTTAAGCAAGTGTATG+GGG + Chr1:52888611-52888630 MsG0180002912.01.T01:intron 40.0%
GTAGTAATACAATGAGGTGG+TGG + Chr1:52888945-52888964 MsG0180002912.01.T01:intron 40.0%
GTGACGAGTAATGATGAAGT+AGG + Chr1:52882230-52882249 MsG0180002912.01.T01:intron 40.0%
GTGGATTTGTATCTCATGGA+GGG - Chr1:52881423-52881442 None:intergenic 40.0%
GTTCAATGGTTTCACCTTGT+GGG + Chr1:52889130-52889149 MsG0180002912.01.T01:intron 40.0%
GTTCAGTTCAGATAGAGGAA+TGG + Chr1:52890984-52891003 MsG0180002912.01.T01:three_prime_UTR 40.0%
TAGAAATGAGTCACCCGTAA+GGG + Chr1:52883215-52883234 MsG0180002912.01.T01:intron 40.0%
TATCTGACATGTTAGAGGTG+AGG + Chr1:52884488-52884507 MsG0180002912.01.T01:intron 40.0%
TATTACTGGTGTCTATGCGT+AGG + Chr1:52888833-52888852 MsG0180002912.01.T01:intron 40.0%
TCAACAAATGGCAAGGGATT+GGG + Chr1:52888479-52888498 MsG0180002912.01.T01:intron 40.0%
TCTATGCGTAAGGTTGTGTT+TGG + Chr1:52888844-52888863 MsG0180002912.01.T01:intron 40.0%
TGAGTTTAGGAATGCCGTTA+AGG + Chr1:52882493-52882512 MsG0180002912.01.T01:intron 40.0%
TGATATAGTTGTGGGTGCTT+TGG + Chr1:52889090-52889109 MsG0180002912.01.T01:intron 40.0%
TGCTGAGAATGATGAGATAG+TGG + Chr1:52883914-52883933 MsG0180002912.01.T01:intron 40.0%
TGGAAAACAGAACTAAACGG+AGG - Chr1:52884119-52884138 None:intergenic 40.0%
TGGACTTGCAGTGAAAGATT+GGG - Chr1:52880806-52880825 None:intergenic 40.0%
TGGGTCTTTAAGCAAGTGTA+TGG + Chr1:52888609-52888628 MsG0180002912.01.T01:intron 40.0%
TGTCAAGACGCTACATTCAA+TGG - Chr1:52886432-52886451 None:intergenic 40.0%
TGTGTCCTAGAGACATGTTA+AGG - Chr1:52886970-52886989 None:intergenic 40.0%
TGTGTGCCCAATAGATTTCT+CGG + Chr1:52888669-52888688 MsG0180002912.01.T01:intron 40.0%
TGTTCAATGGTTTCACCTTG+TGG + Chr1:52889129-52889148 MsG0180002912.01.T01:intron 40.0%
TTCTTAACATGTGCCCTTGA+GGG - Chr1:52886850-52886869 None:intergenic 40.0%
TTGGACTTGCAGTGAAAGAT+TGG - Chr1:52880807-52880826 None:intergenic 40.0%
TTGTGTTGAGGTTGAGGTTT+GGG - Chr1:52887798-52887817 None:intergenic 40.0%
TTTGGAGGACTTAGAACAAC+TGG - Chr1:52881144-52881163 None:intergenic 40.0%
TTTGTGTTGAGGTTGAGGTT+TGG - Chr1:52887799-52887818 None:intergenic 40.0%
! AAAGGTGCAGTTTCGTTGTT+GGG - Chr1:52887730-52887749 None:intergenic 40.0%
! AACACACAACCAAGTCGTTT+TGG - Chr1:52884463-52884482 None:intergenic 40.0%
! ACCACTCCTACTCATCATTT+TGG - Chr1:52883769-52883788 None:intergenic 40.0%
! AGCGTCGAAACTTTGAATGA+AGG + Chr1:52888401-52888420 MsG0180002912.01.T01:intron 40.0%
! AGGGATGATGATGATGATGA+CGG - Chr1:52887568-52887587 None:intergenic 40.0%
! AGTGGATTTGTATCTCATGG+AGG - Chr1:52881424-52881443 None:intergenic 40.0%
! AGTTTTCTCACGGAATTGGA+TGG - Chr1:52884963-52884982 None:intergenic 40.0%
! CTAAATGAGGGAATGGGTTT+AGG + Chr1:52881785-52881804 MsG0180002912.01.T01:intron 40.0%
! GAGCTGATTGACACCAATTT+TGG + Chr1:52881189-52881208 MsG0180002912.01.T01:intron 40.0%
! GAGGTTTCTAGAAGCTTAGA+AGG + Chr1:52880409-52880428 MsG0180002912.01.T01:intron 40.0%
! GAGTCATGCTATGTTTTTCC+AGG + Chr1:52881656-52881675 MsG0180002912.01.T01:intron 40.0%
! GGGATTGGGGTCTTTTTATT+TGG + Chr1:52888493-52888512 MsG0180002912.01.T01:intron 40.0%
! GGTGTGTTTGATGGTTTATG+TGG + Chr1:52888422-52888441 MsG0180002912.01.T01:intron 40.0%
! GTCATGTTACTTGTGTCCTA+AGG - Chr1:52887161-52887180 None:intergenic 40.0%
! GTGTGATTTGGGAACTCTAA+AGG + Chr1:52890478-52890497 MsG0180002912.01.T01:exon 40.0%
! GTTTGTCAGAGGTATGTTAC+TGG - Chr1:52883714-52883733 None:intergenic 40.0%
! GTTTTACCTTTTCCCACAGA+CGG + Chr1:52880208-52880227 MsG0180002912.01.T01:CDS 40.0%
! GTTTTCTCACGGAATTGGAT+GGG - Chr1:52884962-52884981 None:intergenic 40.0%
! TCTGAAGCAACTGTAGAAAC+AGG + Chr1:52881295-52881314 MsG0180002912.01.T01:intron 40.0%
! TGGCCTATTTCTTATTGTCG+TGG + Chr1:52886696-52886715 MsG0180002912.01.T01:intron 40.0%
! TGTGTTTTGTGTTGAGGTTG+AGG - Chr1:52887804-52887823 None:intergenic 40.0%
! TTCGCCTGATATTGTTTTCG+AGG + Chr1:52880116-52880135 MsG0180002912.01.T01:CDS 40.0%
! TTCTCGGTAGAGATTAGTCA+CGG + Chr1:52888685-52888704 MsG0180002912.01.T01:intron 40.0%
! TTGGGGCAAAAGTTTTCTCA+CGG - Chr1:52884973-52884992 None:intergenic 40.0%
! TTTCTAGAAGCTTAGAAGGG+CGG + Chr1:52880413-52880432 MsG0180002912.01.T01:intron 40.0%
!! AACTTCTTGCTCGTTTTTCG+AGG + Chr1:52888011-52888030 MsG0180002912.01.T01:CDS 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + Chr1:52886833-52886852 MsG0180002912.01.T01:intron 40.0%
!! AGGAGTTAAAGCATTGGGTA+AGG + Chr1:52882264-52882283 MsG0180002912.01.T01:intron 40.0%
!! AGTGCTTTTGAAAAGAAGGG+TGG + Chr1:52890729-52890748 MsG0180002912.01.T01:three_prime_UTR 40.0%
!! ATGTTAACTTGTGCCCTCAA+GGG + Chr1:52886834-52886853 MsG0180002912.01.T01:intron 40.0%
!! CTTGCTTGTTGTGATCTTCT+TGG + Chr1:52890772-52890791 MsG0180002912.01.T01:three_prime_UTR 40.0%
!! GCGAGTGCTTTTGAAAAGAA+GGG + Chr1:52890726-52890745 MsG0180002912.01.T01:three_prime_UTR 40.0%
!! GGGGTCTTTTTATTTGGTGA+TGG + Chr1:52888499-52888518 MsG0180002912.01.T01:intron 40.0%
!! GTATGGGGTACTGAGAAATT+TGG + Chr1:52888626-52888645 MsG0180002912.01.T01:intron 40.0%
!! GTTAAAGCATTGGGTAAGGT+TGG + Chr1:52882268-52882287 MsG0180002912.01.T01:CDS 40.0%
!! TAAAGCATTGGGTAAGGTTG+GGG + Chr1:52882270-52882289 MsG0180002912.01.T01:CDS 40.0%
!! TACTCTTGAGAGCATTCTCA+AGG - Chr1:52880305-52880324 None:intergenic 40.0%
!! TGCGAGTGCTTTTGAAAAGA+AGG + Chr1:52890725-52890744 MsG0180002912.01.T01:three_prime_UTR 40.0%
!! TTCAGAGTCTGCTTTTAGCA+CGG - Chr1:52881281-52881300 None:intergenic 40.0%
!! TTCTGGTTCAGTTCAGATAG+AGG + Chr1:52890979-52890998 MsG0180002912.01.T01:three_prime_UTR 40.0%
!! TTTCAAAAGCACTCGCATCT+TGG - Chr1:52890722-52890741 None:intergenic 40.0%
!!! ATTTTTTATGGTGGTGACCG+AGG + Chr1:52887014-52887033 MsG0180002912.01.T01:intron 40.0%
!!! ATTTTTTTTGGTGGTGACCG+AGG + Chr1:52887197-52887216 MsG0180002912.01.T01:intron 40.0%
!!! CGGGTTCTTGAGGTTTTATT+TGG + Chr1:52889736-52889755 MsG0180002912.01.T01:intron 40.0%
!!! CTTTTTATTTGGTGATGGCC+GGG + Chr1:52888504-52888523 MsG0180002912.01.T01:intron 40.0%
!!! GTGCCAAAGAGGTTTTTTGA+AGG + Chr1:52888750-52888769 MsG0180002912.01.T01:intron 40.0%
!!! GTGGGTTGTGTTTTTAGAGA+GGG + Chr1:52890828-52890847 MsG0180002912.01.T01:three_prime_UTR 40.0%
!!! TGAGGTTTGGGTTTTGGTTT+GGG - Chr1:52887786-52887805 None:intergenic 40.0%
!!! TGTGGGTTGTGTTTTTAGAG+AGG + Chr1:52890827-52890846 MsG0180002912.01.T01:three_prime_UTR 40.0%
!!! TTGAGGTTTGGGTTTTGGTT+TGG - Chr1:52887787-52887806 None:intergenic 40.0%
!!! TTGTGTTGTTTTCTGTGTGG+TGG + Chr1:52884018-52884037 MsG0180002912.01.T01:intron 40.0%
!!! TTTTTATTTGGTGATGGCCG+GGG + Chr1:52888505-52888524 MsG0180002912.01.T01:intron 40.0%
AAATGGCGAAAACGACATGG+TGG + Chr1:52884513-52884532 MsG0180002912.01.T01:intron 45.0%
AACTCCTGAGCATCTTCAGT+AGG - Chr1:52890509-52890528 None:intergenic 45.0%
AAGATGTGAGGGCAAGTACA+GGG + Chr1:52884717-52884736 MsG0180002912.01.T01:intron 45.0%
AAGGATGGTTAGAGGAACTG+AGG + Chr1:52890411-52890430 MsG0180002912.01.T01:CDS 45.0%
AAGGGTGGGTGAATGTTCAA+TGG + Chr1:52889116-52889135 MsG0180002912.01.T01:intron 45.0%
AAGGTGCAGTTTCGTTGTTG+GGG - Chr1:52887729-52887748 None:intergenic 45.0%
ACACAAATACCCCTGTTGCT+TGG - Chr1:52880372-52880391 None:intergenic 45.0%
ACTGCAAGTCCAAAATCAGC+AGG + Chr1:52880814-52880833 MsG0180002912.01.T01:intron 45.0%
AGAGCTTAACTCAGTCGGTA+TGG - Chr1:52887257-52887276 None:intergenic 45.0%
AGGATGGTTAGAGGAACTGA+GGG + Chr1:52890412-52890431 MsG0180002912.01.T01:CDS 45.0%
AGTACCTACTGAAGATGCTC+AGG + Chr1:52890502-52890521 MsG0180002912.01.T01:three_prime_UTR 45.0%
ATCAAAGAGGGACAATGGGA+GGG + Chr1:52884607-52884626 MsG0180002912.01.T01:intron 45.0%
ATGCGAGAGCTTAACTCAGT+CGG - Chr1:52887262-52887281 None:intergenic 45.0%
ATTGGGAATGGACGATGCAT+AGG + Chr1:52882919-52882938 MsG0180002912.01.T01:intron 45.0%
CAACAAATGGCAAGGGATTG+GGG + Chr1:52888480-52888499 MsG0180002912.01.T01:intron 45.0%
CATCCAATGCCAAAACGACT+TGG + Chr1:52884451-52884470 MsG0180002912.01.T01:intron 45.0%
CATTAGAGCCGTGCATTTAG+TGG + Chr1:52883586-52883605 MsG0180002912.01.T01:intron 45.0%
CCAACACATCTCTAGCAACT+TGG + Chr1:52881323-52881342 MsG0180002912.01.T01:intron 45.0%
CCAAGTTGCTAGAGATGTGT+TGG - Chr1:52881326-52881345 None:intergenic 45.0%
CCAGAAAGGGCCAGAAAATA+AGG - Chr1:52890931-52890950 None:intergenic 45.0%
CCCTAAGCCTAAAACCTTCT+CGG - Chr1:52880145-52880164 None:intergenic 45.0%
CGACGACGTTTCTTTCTGTA+TGG - Chr1:52887756-52887775 None:intergenic 45.0%
CGATTTGCGATTCAGAAACG+TGG + Chr1:52880176-52880195 MsG0180002912.01.T01:CDS 45.0%
CGTCATCACTCGTCACATTA+TGG - Chr1:52883303-52883322 None:intergenic 45.0%
CTAATGATGTCAAGGTTGCC+TGG + Chr1:52881879-52881898 MsG0180002912.01.T01:intron 45.0%
CTAGCAACTTGGGCAAGAAT+AGG + Chr1:52881334-52881353 MsG0180002912.01.T01:intron 45.0%
CTAGTGAGATGAGAGAGTTG+TGG + Chr1:52884557-52884576 MsG0180002912.01.T01:intron 45.0%
CTTCTTAACATGTGCCCTTG+AGG - Chr1:52886851-52886870 None:intergenic 45.0%
CTTGGGCAAGAATAGGATCT+TGG + Chr1:52881341-52881360 MsG0180002912.01.T01:intron 45.0%
GAACCTAGTTATGTAGGGAG+GGG + Chr1:52883032-52883051 MsG0180002912.01.T01:intron 45.0%
GAGCAAATAGTATGGGTTCG+TGG + Chr1:52882353-52882372 MsG0180002912.01.T01:CDS 45.0%
GCGACCTCGAAAACAATATC+AGG - Chr1:52880123-52880142 None:intergenic 45.0%
GGGATGGTGAAAAACTCGAT+CGG - Chr1:52887709-52887728 None:intergenic 45.0%
GGGTTCCTTAACATGTCTCT+AGG + Chr1:52886962-52886981 MsG0180002912.01.T01:intron 45.0%
GGTTGCTTCCTTGTGAGATT+AGG - Chr1:52889223-52889242 None:intergenic 45.0%
GTAACTAGTGCGTATTACCG+TGG + Chr1:52890328-52890347 MsG0180002912.01.T01:CDS 45.0%
GTAGAAATGAGTCACCCGTA+AGG + Chr1:52883214-52883233 MsG0180002912.01.T01:intron 45.0%
GTCAACAAATGGCAAGGGAT+TGG + Chr1:52888478-52888497 MsG0180002912.01.T01:intron 45.0%
GTTAAGCTCTCGCATCTCTA+TGG + Chr1:52887267-52887286 MsG0180002912.01.T01:intron 45.0%
GTTCCTTAACATGTGCCCTT+AGG + Chr1:52887142-52887161 MsG0180002912.01.T01:intron 45.0%
TAAGATGTGAGGGCAAGTAC+AGG + Chr1:52884716-52884735 MsG0180002912.01.T01:intron 45.0%
TATCAAAGAGGGACAATGGG+AGG + Chr1:52884606-52884625 MsG0180002912.01.T01:intron 45.0%
TCAACTGAGTTAAGCTCACG+AGG + Chr1:52888577-52888596 MsG0180002912.01.T01:intron 45.0%
TCTTCAGTCAGCTGTGGTAT+TGG + Chr1:52880986-52881005 MsG0180002912.01.T01:intron 45.0%
TGAGCCAAGACTCATCTGTT+AGG + Chr1:52889250-52889269 MsG0180002912.01.T01:intron 45.0%
TGAGTCTTGGCTCAACGATA+AGG - Chr1:52889244-52889263 None:intergenic 45.0%
TTATAGCCTGCTATGGGCTT+GGG + Chr1:52880329-52880348 MsG0180002912.01.T01:CDS 45.0%
TTTATAGCCTGCTATGGGCT+TGG + Chr1:52880328-52880347 MsG0180002912.01.T01:CDS 45.0%
! AAAGCACTCGCATCTTGGTT+AGG - Chr1:52890717-52890736 None:intergenic 45.0%
! ACATGCAATGTCTGGAGTTC+CGG - Chr1:52888541-52888560 None:intergenic 45.0%
! CAAAGGTGCAGTTTCGTTGT+TGG - Chr1:52887731-52887750 None:intergenic 45.0%
! CACAAATACCCCTGTTGCTT+GGG - Chr1:52880371-52880390 None:intergenic 45.0%
! GCACTTTTCTCTCTCCTTAC+CGG - Chr1:52884680-52884699 None:intergenic 45.0%
! GCCTTCTTCTGCATTAGCTT+AGG + Chr1:52890183-52890202 MsG0180002912.01.T01:intron 45.0%
! TGTCCTAAGGGCACATGTTA+AGG - Chr1:52887148-52887167 None:intergenic 45.0%
! TTGATTGGTGATTCTGCCGT+TGG + Chr1:52887980-52887999 MsG0180002912.01.T01:CDS 45.0%
! TTGTGGGTGCTTTGGGTAAA+GGG + Chr1:52889098-52889117 MsG0180002912.01.T01:intron 45.0%
!! ATCATCTTAGCGGGTTCTTG+AGG + Chr1:52889726-52889745 MsG0180002912.01.T01:intron 45.0%
!! CAACCAAGTCGTTTTGGCAT+TGG - Chr1:52884457-52884476 None:intergenic 45.0%
!! TAGCTGTGGGACGTTTTAGA+AGG + Chr1:52884077-52884096 MsG0180002912.01.T01:intron 45.0%
!! TGAGGTTGAGGTTTGGGTTT+TGG - Chr1:52887792-52887811 None:intergenic 45.0%
!! TTCTGGCCCTTTCTGGTTAT+AGG + Chr1:52890935-52890954 MsG0180002912.01.T01:three_prime_UTR 45.0%
!!! CCGAGAAGGTTTTAGGCTTA+GGG + Chr1:52880142-52880161 MsG0180002912.01.T01:CDS 45.0%
!!! CCTTATTTTCTGGCCCTTTC+TGG + Chr1:52890928-52890947 MsG0180002912.01.T01:three_prime_UTR 45.0%
!!! GTTTTAGAAGGCGGAGATGA+GGG + Chr1:52884089-52884108 MsG0180002912.01.T01:intron 45.0%
!!! TTTTATTTGGTGATGGCCGG+GGG + Chr1:52888506-52888525 MsG0180002912.01.T01:intron 45.0%
!!! CATAAAAAATATAATTTTAT+GGG - Chr1:52887004-52887023 None:intergenic 5.0%
!!! CTTTTTTTTTTTTTTTATAA+AGG - Chr1:52887342-52887361 None:intergenic 5.0%
!!! TATTTTATTATTCATTTTAT+GGG - Chr1:52883176-52883195 None:intergenic 5.0%
!!! TTATTTTATTATTCATTTTA+TGG - Chr1:52883177-52883196 None:intergenic 5.0%
AATGAGTCACCCGTAAGGGT+TGG + Chr1:52883219-52883238 MsG0180002912.01.T01:intron 50.0%
AATGATGAGGCAGATCCTGG+TGG + Chr1:52890654-52890673 MsG0180002912.01.T01:three_prime_UTR 50.0%
ACAGGAGCTCTCTACACCAA+AGG - Chr1:52881238-52881257 None:intergenic 50.0%
ACATGCATGACACCGTCTCT+CGG - Chr1:52889200-52889219 None:intergenic 50.0%
ACCAGGATCTGCCTCATCAT+TGG - Chr1:52890655-52890674 None:intergenic 50.0%
AGCTCACGAGGACAGAGATA+TGG + Chr1:52888589-52888608 MsG0180002912.01.T01:intron 50.0%
AGGCGAAGACCAACCATCAT+CGG - Chr1:52880103-52880122 None:intergenic 50.0%
AGGTCTCAAGAGCCCTTATG+AGG + Chr1:52880457-52880476 MsG0180002912.01.T01:intron 50.0%
AGGTCTTAGAGCCTTTCTGG+AGG + Chr1:52880498-52880517 MsG0180002912.01.T01:intron 50.0%
AGGTTGACTAGGAGTAGCTG+TGG + Chr1:52884063-52884082 MsG0180002912.01.T01:intron 50.0%
ATGACCGAGGGTGGGATAAA+GGG + Chr1:52884642-52884661 MsG0180002912.01.T01:intron 50.0%
ATGGTTTCACCTTGTGGGTC+TGG + Chr1:52889135-52889154 MsG0180002912.01.T01:intron 50.0%
CACATGGCAAGGATGGTTAG+AGG + Chr1:52890403-52890422 MsG0180002912.01.T01:CDS 50.0%
CATAAGGGCTCTTGAGACCT+TGG - Chr1:52880457-52880476 None:intergenic 50.0%
CTTCAGCACAACCCCTTCAA+TGG + Chr1:52881680-52881699 MsG0180002912.01.T01:intron 50.0%
CTTCCCCTCCCTACATAACT+AGG - Chr1:52883038-52883057 None:intergenic 50.0%
GAAAAGAAGGGTGGTTGCTG+CGG + Chr1:52890738-52890757 MsG0180002912.01.T01:three_prime_UTR 50.0%
GACATCTCTTCAGTCAGCTG+TGG + Chr1:52880980-52880999 MsG0180002912.01.T01:intron 50.0%
GCGATTCAGAAACGTGGTCA+AGG + Chr1:52880182-52880201 MsG0180002912.01.T01:CDS 50.0%
GCTATCTCTCTCTCTCTCTC+AGG + Chr1:52890296-52890315 MsG0180002912.01.T01:intron 50.0%
GCTCAAATATGGGACACTGC+TGG + Chr1:52888117-52888136 MsG0180002912.01.T01:intron 50.0%
GCTCACGAGGACAGAGATAT+GGG + Chr1:52888590-52888609 MsG0180002912.01.T01:intron 50.0%
GGATGGTTAGAGGAACTGAG+GGG + Chr1:52890413-52890432 MsG0180002912.01.T01:CDS 50.0%
GGGAAGCTTATTGCTCACTC+TGG + Chr1:52890793-52890812 MsG0180002912.01.T01:three_prime_UTR 50.0%
GGGCAAGAATAGGATCTTGG+TGG + Chr1:52881344-52881363 MsG0180002912.01.T01:intron 50.0%
GGTCTCAAGAGCCCTTATGA+GGG + Chr1:52880458-52880477 MsG0180002912.01.T01:intron 50.0%
GGTCTTAGAGCCTTTCTGGA+GGG + Chr1:52880499-52880518 MsG0180002912.01.T01:intron 50.0%
GGTTGACTAGGAGTAGCTGT+GGG + Chr1:52884064-52884083 MsG0180002912.01.T01:intron 50.0%
GTTAAACGGAGACTGACAGC+AGG + Chr1:52886515-52886534 MsG0180002912.01.T01:intron 50.0%
GTTGTGTTTGATGCCCGTGT+CGG + Chr1:52888908-52888927 MsG0180002912.01.T01:intron 50.0%
TAAGACCTCCAGAAGGACTC+AGG - Chr1:52880486-52880505 None:intergenic 50.0%
TGAGAGAGTTGTGGACGTAG+AGG + Chr1:52884566-52884585 MsG0180002912.01.T01:intron 50.0%
TGCAGTTTCGTTGTTGGGGA+TGG - Chr1:52887725-52887744 None:intergenic 50.0%
TGCTTGGTTCCCAAGCAACA+GGG + Chr1:52880359-52880378 MsG0180002912.01.T01:CDS 50.0%
TGGAGGGCTTCTAAGCCTTT+AGG + Chr1:52880515-52880534 MsG0180002912.01.T01:intron 50.0%
TGGAGGTCTTAGAGCCTTTC+TGG + Chr1:52880495-52880514 MsG0180002912.01.T01:intron 50.0%
TGGTTTCACCTTGTGGGTCT+GGG + Chr1:52889136-52889155 MsG0180002912.01.T01:intron 50.0%
TTGCTTGGTTCCCAAGCAAC+AGG + Chr1:52880358-52880377 MsG0180002912.01.T01:CDS 50.0%
! AAGGGTGTATAGTGGGGTCA+TGG + Chr1:52884859-52884878 MsG0180002912.01.T01:intron 50.0%
! AATCTGAGGCCGATGATGGT+TGG + Chr1:52880091-52880110 MsG0180002912.01.T01:CDS 50.0%
! ATGCAATGTCTGGAGTTCCG+GGG - Chr1:52888539-52888558 None:intergenic 50.0%
! CATGCAATGTCTGGAGTTCC+GGG - Chr1:52888540-52888559 None:intergenic 50.0%
! GAGAAATCTGAGGCCGATGA+TGG + Chr1:52880087-52880106 MsG0180002912.01.T01:CDS 50.0%
! GTTGTGGGTGCTTTGGGTAA+AGG + Chr1:52889097-52889116 MsG0180002912.01.T01:intron 50.0%
!! AAGGCTCTAAGACCTCCAGA+AGG - Chr1:52880493-52880512 None:intergenic 50.0%
!! AGAGTCTGCTTTTAGCACGG+AGG - Chr1:52881278-52881297 None:intergenic 50.0%
!! TTTATTTGGTGATGGCCGGG+GGG + Chr1:52888507-52888526 MsG0180002912.01.T01:intron 50.0%
!!! CGTTTTAGAAGGCGGAGATG+AGG + Chr1:52884088-52884107 MsG0180002912.01.T01:intron 50.0%
!!! CTGTGGGACGTTTTAGAAGG+CGG + Chr1:52884080-52884099 MsG0180002912.01.T01:intron 50.0%
!!! GCCGAGAAGGTTTTAGGCTT+AGG + Chr1:52880141-52880160 MsG0180002912.01.T01:CDS 50.0%
AAAGAGGGACAATGGGAGGG+AGG + Chr1:52884610-52884629 MsG0180002912.01.T01:intron 55.0%
AAGAGGGACAATGGGAGGGA+GGG + Chr1:52884611-52884630 MsG0180002912.01.T01:intron 55.0%
AAGGGGTTGTGCTGAAGTCC+TGG - Chr1:52881677-52881696 None:intergenic 55.0%
ACATCGCTCCAACAGCTCCA+CGG - Chr1:52890348-52890367 None:intergenic 55.0%
AGAGGGTTGAGGTTGCTGGT+GGG + Chr1:52884756-52884775 MsG0180002912.01.T01:intron 55.0%
AGGGTGGGATAAAGGGTGGA+TGG + Chr1:52884649-52884668 MsG0180002912.01.T01:intron 55.0%
CCAAAACCCAAGCCCATAGC+AGG - Chr1:52880338-52880357 None:intergenic 55.0%
CTGGTGGGGATAGACAGAAG+GGG + Chr1:52884771-52884790 MsG0180002912.01.T01:intron 55.0%
GATGACCGAGGGTGGGATAA+AGG + Chr1:52884641-52884660 MsG0180002912.01.T01:intron 55.0%
GCCAATGATGAGGCAGATCC+TGG + Chr1:52890651-52890670 MsG0180002912.01.T01:three_prime_UTR 55.0%
GCGTATTACCGTGGAGCTGT+TGG + Chr1:52890337-52890356 MsG0180002912.01.T01:CDS 55.0%
GCTGGTGGGGATAGACAGAA+GGG + Chr1:52884770-52884789 MsG0180002912.01.T01:intron 55.0%
GCTTGGTTCCCAAGCAACAG+GGG + Chr1:52880360-52880379 MsG0180002912.01.T01:CDS 55.0%
GGCTTAGAAGCCCTCCAGAA+AGG - Chr1:52880512-52880531 None:intergenic 55.0%
GGGACACTGCTGGTCAAGAA+AGG + Chr1:52888127-52888146 MsG0180002912.01.T01:intron 55.0%
GGGATAAAGGGTGGATGGTG+TGG + Chr1:52884654-52884673 MsG0180002912.01.T01:intron 55.0%
GGTGGTTCAGGGCTTCTGAA+GGG + Chr1:52890675-52890694 MsG0180002912.01.T01:three_prime_UTR 55.0%
GGTTTCACCTTGTGGGTCTG+GGG + Chr1:52889137-52889156 MsG0180002912.01.T01:intron 55.0%
TAAAGGGTGGATGGTGTGGC+CGG + Chr1:52884658-52884677 MsG0180002912.01.T01:intron 55.0%
TAACCCCACAAGCCGAGAGA+CGG + Chr1:52889185-52889204 MsG0180002912.01.T01:intron 55.0%
TCCACCCTTTATCCCACCCT+CGG - Chr1:52884649-52884668 None:intergenic 55.0%
TGACAGAGGGTTGAGGTTGC+TGG + Chr1:52884752-52884771 MsG0180002912.01.T01:intron 55.0%
TGCTGGTGGGGATAGACAGA+AGG + Chr1:52884769-52884788 MsG0180002912.01.T01:intron 55.0%
TGGCGAAAACGACATGGTGG+TGG + Chr1:52884516-52884535 MsG0180002912.01.T01:intron 55.0%
TGGGGATAGACAGAAGGGGA+AGG + Chr1:52884775-52884794 MsG0180002912.01.T01:intron 55.0%
TGGTGGTTCAGGGCTTCTGA+AGG + Chr1:52890674-52890693 MsG0180002912.01.T01:three_prime_UTR 55.0%
TTATGGAGCCGACACCGACA+CGG - Chr1:52888925-52888944 None:intergenic 55.0%
! CCTGCTATGGGCTTGGGTTT+TGG + Chr1:52880335-52880354 MsG0180002912.01.T01:CDS 55.0%
! GAGGTCGCCGAGAAGGTTTT+AGG + Chr1:52880135-52880154 MsG0180002912.01.T01:CDS 55.0%
! GGGTGCTTTGGGTAAAGGGT+GGG + Chr1:52889102-52889121 MsG0180002912.01.T01:intron 55.0%
! TGGGTGCTTTGGGTAAAGGG+TGG + Chr1:52889101-52889120 MsG0180002912.01.T01:intron 55.0%
! TTTGATGCCCGTGTCGGTGT+CGG + Chr1:52888914-52888933 MsG0180002912.01.T01:intron 55.0%
!! ACTCTGGCTCTGCCTACATG+TGG + Chr1:52890809-52890828 MsG0180002912.01.T01:three_prime_UTR 55.0%
!! CAGATCCTGGTGGTGGTTCA+GGG + Chr1:52890664-52890683 MsG0180002912.01.T01:three_prime_UTR 55.0%
!! CTCTGGCTCTGCCTACATGT+GGG + Chr1:52890810-52890829 MsG0180002912.01.T01:three_prime_UTR 55.0%
!! TGTTTTCGAGGTCGCCGAGA+AGG + Chr1:52880128-52880147 MsG0180002912.01.T01:CDS 55.0%
!!! GGGCTTGGGTTTTGGTTGCT+TGG + Chr1:52880343-52880362 MsG0180002912.01.T01:CDS 55.0%
ACCGAGGGTGGGATAAAGGG+TGG + Chr1:52884645-52884664 MsG0180002912.01.T01:intron 60.0%
AGAAGCCCTGAACCACCACC+AGG - Chr1:52890672-52890691 None:intergenic 60.0%
AGAGGGACAATGGGAGGGAG+GGG + Chr1:52884612-52884631 MsG0180002912.01.T01:intron 60.0%
AGGACTCAGGCGCCCTCATA+AGG - Chr1:52880473-52880492 None:intergenic 60.0%
AGGGGGAGGAAGATGACCGA+GGG + Chr1:52884630-52884649 MsG0180002912.01.T01:intron 60.0%
AGTACAGTTGGCGCCGTCTG+TGG - Chr1:52880224-52880243 None:intergenic 60.0%
CAGAGGGTTGAGGTTGCTGG+TGG + Chr1:52884755-52884774 MsG0180002912.01.T01:intron 60.0%
CTTAGAAGGGCGGTGCCTCA+AGG + Chr1:52880423-52880442 MsG0180002912.01.T01:intron 60.0%
GAGGGTTGAGGTTGCTGGTG+GGG + Chr1:52884757-52884776 MsG0180002912.01.T01:intron 60.0%
GATGAGGCAGATCCTGGTGG+TGG + Chr1:52890657-52890676 MsG0180002912.01.T01:three_prime_UTR 60.0%
GGACTCAGGCGCCCTCATAA+GGG - Chr1:52880472-52880491 None:intergenic 60.0%
GGAGGAAGATGACCGAGGGT+GGG + Chr1:52884634-52884653 MsG0180002912.01.T01:intron 60.0%
GTACAGTTGGCGCCGTCTGT+GGG - Chr1:52880223-52880242 None:intergenic 60.0%
TATGGAGCCGACACCGACAC+GGG - Chr1:52888924-52888943 None:intergenic 60.0%
TCACCTTGTGGGTCTGGGGA+GGG + Chr1:52889141-52889160 MsG0180002912.01.T01:intron 60.0%
TGAGGGCAAGTACAGGGCGA+CGG + Chr1:52884723-52884742 MsG0180002912.01.T01:intron 60.0%
TTCACCTTGTGGGTCTGGGG+AGG + Chr1:52889140-52889159 MsG0180002912.01.T01:intron 60.0%
TTGGCGCCGTCTGTGGGAAA+AGG - Chr1:52880217-52880236 None:intergenic 60.0%
! ACACCGTCTCTCGGCTTGTG+GGG - Chr1:52889191-52889210 None:intergenic 60.0%
! CAGGGCTTCTGAAGGGAACC+AGG + Chr1:52890682-52890701 MsG0180002912.01.T01:three_prime_UTR 60.0%
! GACACCGTCTCTCGGCTTGT+GGG - Chr1:52889192-52889211 None:intergenic 60.0%
! GTGGTGGTGACAGAGGGTTG+AGG + Chr1:52884745-52884764 MsG0180002912.01.T01:intron 60.0%
! TGACACCGTCTCTCGGCTTG+TGG - Chr1:52889193-52889212 None:intergenic 60.0%
!! AAGCTCTGGGGGTCGAACCT+CGG - Chr1:52887217-52887236 None:intergenic 60.0%
!! GCAGATCCTGGTGGTGGTTC+AGG + Chr1:52890663-52890682 MsG0180002912.01.T01:three_prime_UTR 60.0%
ACCTTGGCGCTCTCGCCTTG+AGG - Chr1:52880441-52880460 None:intergenic 65.0%
CAAGTACAGGGCGACGGTGG+TGG + Chr1:52884729-52884748 MsG0180002912.01.T01:intron 65.0%
CTACCCTCCCCAGACCCACA+AGG - Chr1:52889147-52889166 None:intergenic 65.0%
GAGGGACAATGGGAGGGAGG+GGG + Chr1:52884613-52884632 MsG0180002912.01.T01:intron 65.0%
GAGGGGGAGGAAGATGACCG+AGG + Chr1:52884629-52884648 MsG0180002912.01.T01:intron 65.0%
GGGAGGAAGATGACCGAGGG+TGG + Chr1:52884633-52884652 MsG0180002912.01.T01:intron 65.0%
GGTGGATGGTGTGGCCGGTA+AGG + Chr1:52884663-52884682 MsG0180002912.01.T01:intron 65.0%
! GCGACGGTGGTGGTGACAGA+GGG + Chr1:52884739-52884758 MsG0180002912.01.T01:intron 65.0%
!! TGAGGGCGCCTGAGTCCTTC+TGG + Chr1:52880475-52880494 MsG0180002912.01.T01:intron 65.0%
GGACAATGGGAGGGAGGGGG+AGG + Chr1:52884616-52884635 MsG0180002912.01.T01:intron 70.0%
GGGCAAGTACAGGGCGACGG+TGG + Chr1:52884726-52884745 MsG0180002912.01.T01:intron 70.0%
GGGCGCCTGAGTCCTTCTGG+AGG + Chr1:52880478-52880497 MsG0180002912.01.T01:intron 70.0%
GTTCCGGGGTTCGAACCCCC+CGG - Chr1:52888525-52888544 None:intergenic 70.0%
! GGCGACGGTGGTGGTGACAG+AGG + Chr1:52884738-52884757 MsG0180002912.01.T01:intron 70.0%
!! GCCTCAAGGCGAGAGCGCCA+AGG + Chr1:52880437-52880456 MsG0180002912.01.T01:intron 70.0%
TGGCCGGGGGGTTCGAACCC+CGG + Chr1:52888519-52888538 MsG0180002912.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 52880081 52891075 52880081 ID=MsG0180002912.01;Name=MsG0180002912.01
Chr1 mRNA 52880081 52891075 52880081 ID=MsG0180002912.01.T01;Parent=MsG0180002912.01;Name=MsG0180002912.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0|0.25|0.5|1|1|4|592|248
Chr1 exon 52880081 52880381 52880081 ID=MsG0180002912.01.T01:exon:2595;Parent=MsG0180002912.01.T01
Chr1 exon 52882266 52882374 52882266 ID=MsG0180002912.01.T01:exon:2596;Parent=MsG0180002912.01.T01
Chr1 exon 52887922 52888092 52887922 ID=MsG0180002912.01.T01:exon:2597;Parent=MsG0180002912.01.T01
Chr1 exon 52890318 52891075 52890318 ID=MsG0180002912.01.T01:exon:2598;Parent=MsG0180002912.01.T01
Chr1 CDS 52880081 52880381 52880081 ID=MsG0180002912.01.T01:cds;Parent=MsG0180002912.01.T01
Chr1 CDS 52882266 52882374 52882266 ID=MsG0180002912.01.T01:cds;Parent=MsG0180002912.01.T01
Chr1 CDS 52887922 52888092 52887922 ID=MsG0180002912.01.T01:cds;Parent=MsG0180002912.01.T01
Chr1 CDS 52890318 52890483 52890318 ID=MsG0180002912.01.T01:cds;Parent=MsG0180002912.01.T01
Chr1 three_prime_UTR 52890484 52891075 52890484 ID=MsG0180002912.01.T01:three_prime_utr;Parent=MsG0180002912.01.T01
Gene Sequence

>MsG0180002912.01.T01

ATGTTTGAGAAATCTGAGGCCGATGATGGTTGGTCTTCGCCTGATATTGTTTTCGAGGTCGCCGAGAAGGTTTTAGGCTTAGGGTTTCTAAATCACGATTTGCGATTCAGAAACGTGGTCAAGGTTAGTTTTACCTTTTCCCACAGACGGCGCCAACTGTACTTGCAAAAAAGTACGGTAAGGAATACTAGGATTCTAGGGTTTAGACTGATGATTAGATGCCTTGAGAATGCTCTCAAGAGTAGTATTTATAGCCTGCTATGGGCTTGGGTTTTGGTTGCTTGGTTCCCAAGCAACAGGGGAGTTAAAGCATTGGGTAAGGTTGGGGATGATATAACAGTGAGAAAAGATATCAAGTTAATTATGGTTAAAAGACGAGAATTTAACAGAGCAAATAGTATGGGTTCGTGGATGTCGAATTTATACGGTGATTATAATCAGAAGATCGATTACGTTTTCAAAGTGGTGTTGATTGGTGATTCTGCCGTTGGAAAAACACAACTTCTTGCTCGTTTTTCGAGGAATCAATTTAACGTTGATTCTAAAGCTACAATTGGTGTTGAGTTTCAAACCAAAACTCTGTACAGAGCAGTAACTAGTGCGTATTACCGTGGAGCTGTTGGAGCGATGTTAGTTTACGACATGACTAAGCGTCAATCATTTGATCACATGGCAAGGATGGTTAGAGGAACTGAGGGGTCATGCAGACACAAATATTGTCATAATGCTAATTGGCAACAAGTGTGA
Protein sequence

>MsG0180002912.01.T01

MFEKSEADDGWSSPDIVFEVAEKVLGLGFLNHDLRFRNVVKVSFTFSHRRRQLYLQKSTVRNTRILGFRLMIRCLENALKSSIYSLLWAWVLVAWFPSNRGVKALGKVGDDITVRKDIKLIMVKRREFNRANSMGSWMSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARMVRGTEGSCRHKYCHNANWQQV*