AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010614.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010614.01.T01 MTR_2g088700 57.879 330 52 7 69 352 7 295 1.53e-107 318
MsG0280010614.01.T01 MTR_2g088700 52.997 317 62 7 69 339 7 282 1.36e-88 269
MsG0280010614.01.T01 MTR_6g028140 43.498 223 80 4 166 342 58 280 6.46e-46 159
MsG0280010614.01.T01 MTR_2g012270 39.831 236 92 6 166 352 57 291 3.47e-39 141
MsG0280010614.01.T01 MTR_4g090900 37.229 231 97 5 154 337 46 275 6.55e-34 127
MsG0280010614.01.T01 MTR_5g012010 38.914 221 88 5 166 339 75 295 2.25e-31 121
MsG0280010614.01.T01 MTR_1g056550 37.037 216 88 5 169 337 68 282 6.39e-30 117
MsG0280010614.01.T01 MTR_1g056560 35.981 214 89 5 171 337 74 286 3.35e-26 107
MsG0280010614.01.T01 MTR_7g106420 32.203 236 112 5 154 342 40 274 2.50e-24 101
MsG0280010614.01.T01 MTR_5g020670 30.583 206 103 5 171 337 70 274 7.41e-20 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010614.01.T01 AT5G08080 52.727 220 56 8 167 339 59 277 2.84e-50 171
MsG0280010614.01.T01 AT5G08080 52.727 220 56 8 167 339 59 277 2.84e-50 171
MsG0280010614.01.T01 AT3G03800 45.909 220 73 4 166 339 59 278 6.72e-50 170
MsG0280010614.01.T01 AT3G03800 45.909 220 73 4 166 339 59 278 6.72e-50 170
MsG0280010614.01.T01 AT5G08080 42.812 313 98 12 74 339 10 288 1.51e-49 169
MsG0280010614.01.T01 AT1G61290 35.983 239 105 5 161 352 52 289 1.46e-33 127
MsG0280010614.01.T01 AT1G61290 35.983 239 105 5 161 352 52 289 1.46e-33 127
MsG0280010614.01.T01 AT4G03330 37.281 228 95 5 162 342 56 282 1.62e-31 121
MsG0280010614.01.T01 AT1G11250 38.813 219 86 5 166 337 52 269 1.76e-31 121
MsG0280010614.01.T01 AT1G08560 36.866 217 94 4 166 339 69 285 2.93e-29 115
MsG0280010614.01.T01 AT3G52400 36.444 225 95 5 165 342 66 289 3.84e-29 115
MsG0280010614.01.T01 AT3G11820 36.744 215 88 5 170 337 41 254 1.69e-28 113
MsG0280010614.01.T01 AT3G11820 36.744 215 88 5 170 337 72 285 2.97e-28 113
MsG0280010614.01.T01 AT2G18260 28.814 236 123 7 165 355 70 305 1.35e-21 94.4
MsG0280010614.01.T01 AT2G18260 28.814 236 123 7 165 355 70 305 1.35e-21 94.4
MsG0280010614.01.T01 AT5G08080 45.968 124 52 4 167 279 59 178 2.28e-15 75.1
MsG0280010614.01.T01 AT5G08080 45.968 124 52 4 167 279 59 178 2.28e-15 75.1

Find 58 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATACCGGTGACGATCTT+AGG 0.262486 2:+72301502 MsG0280010614.01.T01:CDS
CATTGTAACAATACCTTTCA+TGG 0.265022 2:-72303783 None:intergenic
TCAATATCACCTTGTCTAGA+AGG 0.318330 2:-72302966 None:intergenic
TTCATTATACCCTGTATGTT+TGG 0.324839 2:-72303474 None:intergenic
TCAAAGAAGCAGTTCTGATA+TGG 0.330289 2:+72303004 MsG0280010614.01.T01:CDS
GGATCTCATGACAGATTTCC+AGG 0.345216 2:+72304404 MsG0280010614.01.T01:CDS
AACGTATCTAAGTTCATTCA+TGG 0.367084 2:-72301352 None:intergenic
GTGGAGAGAAGAGTTATTAC+AGG 0.369427 2:+72304550 MsG0280010614.01.T01:CDS
TATGCTACATGATAAGTATA+AGG 0.386866 2:+72301455 MsG0280010614.01.T01:CDS
TAGACAAGGTGATATTGAAA+TGG 0.390149 2:+72302971 MsG0280010614.01.T01:CDS
CATGATGATTGCCATTATAT+TGG 0.396943 2:+72307952 MsG0280010614.01.T01:CDS
GAGCACTGTAGAAGAAATTC+AGG 0.400036 2:+72305308 MsG0280010614.01.T01:CDS
CGTTATGCACGATATGACTA+TGG 0.411740 2:+72301371 MsG0280010614.01.T01:CDS
TTTGTTAGTGAGGCTAATCA+TGG 0.423310 2:+72302939 MsG0280010614.01.T01:CDS
GAAAAGGATATTGATGAAGT+TGG 0.433278 2:+72304054 MsG0280010614.01.T01:CDS
AAAACTTCTTGATTTACATC+AGG 0.438716 2:+72305362 MsG0280010614.01.T01:CDS
TAATGTTAACTGTGTGTGTC+TGG 0.441303 2:+72303422 MsG0280010614.01.T01:CDS
TACTGTGAAACCAAACATAC+AGG 0.443097 2:+72303464 MsG0280010614.01.T01:CDS
AATGAGCAGGACCAATATAA+TGG 0.458910 2:-72307963 None:intergenic
ACATATTGAGTGATTTCCAT+TGG 0.459133 2:-72303399 None:intergenic
AGACAAGGTGATATTGAAAT+GGG 0.460114 2:+72302972 MsG0280010614.01.T01:CDS
ACCGGGGCCCTTTCACAGCC+AGG 0.467186 2:-72304247 None:intergenic
CAACTAAGACTGCCATATCA+AGG 0.475634 2:-72305486 None:intergenic
TTTAGACAACATCGAAAGCC+AGG 0.482075 2:+72305525 MsG0280010614.01.T01:CDS
GCAACTGATCATGTGAAGTC+AGG 0.485446 2:+72307878 MsG0280010614.01.T01:CDS
AGATGAATATCGTGAGGTTG+TGG 0.491519 2:+72304531 MsG0280010614.01.T01:CDS
GACAAAAGCCTGGCTGTGAA+AGG 0.501514 2:+72304239 MsG0280010614.01.T01:CDS
TGTATGTTTGGTTTCACAGT+AGG 0.508050 2:-72303462 None:intergenic
ATGTTTGGTTTCACAGTAGG+AGG 0.515924 2:-72303459 None:intergenic
TACTTAAGATGGCAATGAGC+AGG 0.520288 2:-72307976 None:intergenic
ACAAAAGCCTGGCTGTGAAA+GGG 0.539632 2:+72304240 MsG0280010614.01.T01:CDS
ACCACACCGAGTACTTAAGA+TGG 0.542680 2:-72307987 None:intergenic
GCAGGATTCATTTGTTAGTG+AGG 0.542999 2:+72302929 MsG0280010614.01.T01:intron
GAAGCAGTTCTGATATGGAA+TGG 0.547322 2:+72303009 MsG0280010614.01.T01:CDS
GCAAGTAAAGAATATGATAC+CGG 0.550128 2:+72301489 MsG0280010614.01.T01:CDS
GCCTGGCTGTGAAAGGGCCC+CGG 0.551772 2:+72304246 MsG0280010614.01.T01:CDS
ACGTATCTAAGTTCATTCAT+GGG 0.560550 2:-72301351 None:intergenic
ACAAAAGCATCTGCCATGAA+AGG 0.562432 2:+72303770 MsG0280010614.01.T01:CDS
TCATTGCCATCTTAAGTACT+CGG 0.563112 2:+72307981 MsG0280010614.01.T01:CDS
AGAGACAAAATCAATTCCAA+TGG 0.565427 2:+72303383 MsG0280010614.01.T01:CDS
AAAGTGAGTTGAATGTGAAG+CGG 0.578840 2:+72303255 MsG0280010614.01.T01:CDS
AACTAAGACTGCCATATCAA+GGG 0.578984 2:-72305485 None:intergenic
TCTAAACATAGACAAAAGCC+TGG 0.589032 2:+72304229 MsG0280010614.01.T01:CDS
TACTCGGTGTGGTGAAACCA+TGG 0.589247 2:+72307997 MsG0280010614.01.T01:CDS
TGTTACGTAAAGTGTACACT+TGG 0.602460 2:+72301588 MsG0280010614.01.T01:CDS
GGGAAACCTAAGATCGTCAC+CGG 0.614467 2:-72301508 None:intergenic
CATGGACAACCTTCTAGACA+AGG 0.616783 2:+72302957 MsG0280010614.01.T01:CDS
AGTGTACACTTTACGTAACA+AGG 0.617308 2:-72301585 None:intergenic
AGTTGGAAAGATTGCACATG+GGG 0.621884 2:+72304071 MsG0280010614.01.T01:CDS
GCAGTCTTAGTTGATGCTCA+AGG 0.625652 2:+72305496 MsG0280010614.01.T01:CDS
AGAGTTTGCAAAAGAAGTCG+AGG 0.629822 2:+72307924 MsG0280010614.01.T01:CDS
TACATGATAAGTATAAGGCA+TGG 0.660467 2:+72301460 MsG0280010614.01.T01:CDS
GAAGTTGGAAAGATTGCACA+TGG 0.661524 2:+72304069 MsG0280010614.01.T01:CDS
ACTGTGAAACCAAACATACA+GGG 0.666455 2:+72303465 MsG0280010614.01.T01:CDS
AATACAAGATGAATATCGTG+AGG 0.673419 2:+72304525 MsG0280010614.01.T01:CDS
AAAGTGTACACTTGGCAATG+CGG 0.696287 2:+72301596 MsG0280010614.01.T01:CDS
GCCATCTTAAGTACTCGGTG+TGG 0.699237 2:+72307986 MsG0280010614.01.T01:CDS
AAGTTGGAAAGATTGCACAT+GGG 0.717743 2:+72304070 MsG0280010614.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACAAATTTATATATAG+GGG + Chr2:72306779-72306798 MsG0280010614.01.T01:intron 10.0%
!! TTCAAAATAAAAAATAATCT+TGG - Chr2:72305178-72305197 None:intergenic 10.0%
!!! CTTTTCAAAATTAAAAAATA+CGG - Chr2:72304937-72304956 None:intergenic 10.0%
!!! TCAAAATATTAACTTTTTTT+AGG + Chr2:72302224-72302243 MsG0280010614.01.T01:intron 10.0%
!!! TTTATTCATATTTTTCTTAT+AGG + Chr2:72305113-72305132 MsG0280010614.01.T01:intron 10.0%
!! AATATTTATTTAGTTGACAA+TGG + Chr2:72305412-72305431 MsG0280010614.01.T01:intron 15.0%
!! AATGAACTAAAAAATCAAAA+TGG - Chr2:72307286-72307305 None:intergenic 15.0%
!! ATCTGAAAAAATAATATGAT+AGG - Chr2:72305463-72305482 None:intergenic 15.0%
!! CACAATCAAAAATTAAAAAA+GGG + Chr2:72306538-72306557 MsG0280010614.01.T01:intron 15.0%
!! GTTTATATTTAAAAGTTTCA+GGG - Chr2:72307652-72307671 None:intergenic 15.0%
!! TATATATACAGAAAAAATCA+AGG - Chr2:72305568-72305587 None:intergenic 15.0%
!! TGTATTATTATTTATACGAA+CGG + Chr2:72301979-72301998 MsG0280010614.01.T01:intron 15.0%
!! TGTTATATAGATTTCAAATA+CGG + Chr2:72304170-72304189 MsG0280010614.01.T01:intron 15.0%
!! TTGATGTAATATTATTCATT+CGG + Chr2:72302005-72302024 MsG0280010614.01.T01:intron 15.0%
!!! ACAATAAAAAGAGTAATTTT+AGG + Chr2:72302300-72302319 MsG0280010614.01.T01:intron 15.0%
!!! TAAGGATATATTTTTATGTA+TGG + Chr2:72301946-72301965 MsG0280010614.01.T01:intron 15.0%
!!! TATTAGTTTTGTTTGTTAAA+AGG + Chr2:72307364-72307383 MsG0280010614.01.T01:intron 15.0%
!! AAATTGTTCATACTTTAATG+AGG - Chr2:72306860-72306879 None:intergenic 20.0%
!! AACTAAAAAATCAAAATGGT+TGG - Chr2:72307282-72307301 None:intergenic 20.0%
!! AATGAGCTTATAACTAATAA+TGG - Chr2:72307039-72307058 None:intergenic 20.0%
!! AATTGTTCATACTTTAATGA+GGG - Chr2:72306859-72306878 None:intergenic 20.0%
!! ACAAATGAGAGAAAAAAAAA+AGG - Chr2:72306117-72306136 None:intergenic 20.0%
!! AGTATGAAATAATAAAGGAA+TGG - Chr2:72307807-72307826 None:intergenic 20.0%
!! ATGAGCTTATAACTAATAAT+GGG - Chr2:72307038-72307057 None:intergenic 20.0%
!! GAAAAGCAATTAAAGAAAAA+TGG - Chr2:72306452-72306471 None:intergenic 20.0%
!! GATCAAAATTAATCCTATTT+AGG + Chr2:72302768-72302787 MsG0280010614.01.T01:intron 20.0%
!! GCACAATCAAAAATTAAAAA+AGG + Chr2:72306537-72306556 MsG0280010614.01.T01:intron 20.0%
!! GGTTTATATTTAAAAGTTTC+AGG - Chr2:72307653-72307672 None:intergenic 20.0%
!! GTATGAAATAATAAAGGAAT+GGG - Chr2:72307806-72307825 None:intergenic 20.0%
!! GTATTATTATTTATACGAAC+GGG + Chr2:72301980-72301999 MsG0280010614.01.T01:intron 20.0%
!! TAAAAAATACCAGTAAACTT+AGG - Chr2:72303554-72303573 None:intergenic 20.0%
!! TGATGTAATATTATTCATTC+GGG + Chr2:72302006-72302025 MsG0280010614.01.T01:intron 20.0%
!! TGCTATGTTAATTTATGTTT+AGG + Chr2:72301562-72301581 MsG0280010614.01.T01:intron 20.0%
!! TTAGCAGTATGAAATAATAA+AGG - Chr2:72307812-72307831 None:intergenic 20.0%
!! TTAGTTCATATATTACTTTG+TGG + Chr2:72303652-72303671 MsG0280010614.01.T01:intron 20.0%
!! TTGAAAATTGAATTTAGGAA+AGG - Chr2:72302642-72302661 None:intergenic 20.0%
!!! AAAAATTCGATTTTGATTAC+TGG + Chr2:72302605-72302624 MsG0280010614.01.T01:intron 20.0%
!!! AAAATCGAATTTTTTTTCTG+GGG - Chr2:72302599-72302618 None:intergenic 20.0%
!!! AAAATTCGATTTTGATTACT+GGG + Chr2:72302606-72302625 MsG0280010614.01.T01:intron 20.0%
!!! AAATTAATCCTATTTAGGTT+TGG + Chr2:72302773-72302792 MsG0280010614.01.T01:intron 20.0%
!!! AAGAGATAAGTCAATTTTAA+GGG - Chr2:72307216-72307235 None:intergenic 20.0%
!!! AATCATATCTTACTTGTTAT+AGG - Chr2:72301664-72301683 None:intergenic 20.0%
!!! AATTAATCCTATTTAGGTTT+GGG + Chr2:72302774-72302793 MsG0280010614.01.T01:intron 20.0%
!!! AATTCATTATGATATTGACT+TGG + Chr2:72302803-72302822 MsG0280010614.01.T01:intron 20.0%
!!! ATTCATATTTTTCTTATAGG+AGG + Chr2:72305116-72305135 MsG0280010614.01.T01:intron 20.0%
!!! ATTCATTATGATATTGACTT+GGG + Chr2:72302804-72302823 MsG0280010614.01.T01:intron 20.0%
!!! CAAAATCGAATTTTTTTTCT+GGG - Chr2:72302600-72302619 None:intergenic 20.0%
!!! CTTATACTTTTTGAATAACT+CGG - Chr2:72304643-72304662 None:intergenic 20.0%
!!! GAAATCAATTTTAACTTTGA+AGG - Chr2:72302738-72302757 None:intergenic 20.0%
!!! TCAAAATCGAATTTTTTTTC+TGG - Chr2:72302601-72302620 None:intergenic 20.0%
!!! TCATATTTTTCATCTCAATT+AGG + Chr2:72306664-72306683 MsG0280010614.01.T01:intron 20.0%
!!! TTCATATTTTTCTTATAGGA+GGG + Chr2:72305117-72305136 MsG0280010614.01.T01:intron 20.0%
!!! TTTTTGTAGATCAAATTCTA+AGG + Chr2:72302883-72302902 MsG0280010614.01.T01:intron 20.0%
!!! TTTTTTGTTTTGTTTTTTGC+AGG + Chr2:72302911-72302930 MsG0280010614.01.T01:intron 20.0%
! AAAACATTCAATCTTAACAC+TGG + Chr2:72307684-72307703 MsG0280010614.01.T01:intron 25.0%
! AAAACTTCTTGATTTACATC+AGG + Chr2:72305362-72305381 MsG0280010614.01.T01:CDS 25.0%
! AAAAGACTATCTAAGTTTGA+TGG - Chr2:72307749-72307768 None:intergenic 25.0%
! AACACAGTTAACTTTATCAA+GGG - Chr2:72304591-72304610 None:intergenic 25.0%
! AATGAATGAATGATTGTGTT+TGG - Chr2:72302477-72302496 None:intergenic 25.0%
! ACGGATAAAAAATAGTTAAC+CGG + Chr2:72304189-72304208 MsG0280010614.01.T01:intron 25.0%
! ATAAGTTTGGCAAAAACAAA+TGG - Chr2:72303697-72303716 None:intergenic 25.0%
! ATTGAATATCCTAAGTTTAC+TGG + Chr2:72303542-72303561 MsG0280010614.01.T01:intron 25.0%
! CAAGTAAGATATGATTATGA+CGG + Chr2:72301668-72301687 MsG0280010614.01.T01:intron 25.0%
! CTCAAAAGACATAAAAGAAA+AGG - Chr2:72306619-72306638 None:intergenic 25.0%
! CTCAGTTGAAAATTGAATTT+AGG - Chr2:72302647-72302666 None:intergenic 25.0%
! CTCATTAGTCATTAGTAATT+GGG + Chr2:72307053-72307072 MsG0280010614.01.T01:intron 25.0%
! GACAAGAAACAAAATAGAAA+AGG + Chr2:72302375-72302394 MsG0280010614.01.T01:intron 25.0%
! TAATCATTGTGTTGTCAAAA+TGG + Chr2:72307829-72307848 MsG0280010614.01.T01:intron 25.0%
! TATGCTACATGATAAGTATA+AGG + Chr2:72301455-72301474 MsG0280010614.01.T01:CDS 25.0%
! TCATTAGTCATTAGTAATTG+GGG + Chr2:72307054-72307073 MsG0280010614.01.T01:intron 25.0%
! TGATAGCTACTATTATTAAC+AGG - Chr2:72305751-72305770 None:intergenic 25.0%
! TTTAGTAACGGTTATAAGTT+TGG - Chr2:72303710-72303729 None:intergenic 25.0%
!! AAGCCATGATAAACTTTTTA+AGG - Chr2:72306009-72306028 None:intergenic 25.0%
!! AATGGAAGCTTTTAATAAAC+AGG + Chr2:72303027-72303046 MsG0280010614.01.T01:CDS 25.0%
!! ATCTGAAACAAATAAGGATT+GGG - Chr2:72301845-72301864 None:intergenic 25.0%
!! CGAGTTATTCAAAAAGTATA+AGG + Chr2:72304641-72304660 MsG0280010614.01.T01:intron 25.0%
!! CTAAATTCAATTTTCAACTG+AGG + Chr2:72302645-72302664 MsG0280010614.01.T01:intron 25.0%
!! GAAGAGATAAGTCAATTTTA+AGG - Chr2:72307217-72307236 None:intergenic 25.0%
!! TAGCCTTAAAAAGTTTATCA+TGG + Chr2:72306003-72306022 MsG0280010614.01.T01:intron 25.0%
!! TATCTGAAACAAATAAGGAT+TGG - Chr2:72301846-72301865 None:intergenic 25.0%
!! TCATATTTTTCTTATAGGAG+GGG + Chr2:72305118-72305137 MsG0280010614.01.T01:intron 25.0%
!! TTGACTTGATTATTCAGTTA+CGG + Chr2:72304698-72304717 MsG0280010614.01.T01:intron 25.0%
!! TTTGAATTTGCTTAAATGTG+AGG - Chr2:72307600-72307619 None:intergenic 25.0%
!! TTTTTCGTATTTTCATCTCA+TGG + Chr2:72305020-72305039 MsG0280010614.01.T01:intron 25.0%
!!! AAAAACTACTTTGTTTTGTC+TGG - Chr2:72306263-72306282 None:intergenic 25.0%
!!! AAATCGAATTTTTTTTCTGG+GGG - Chr2:72302598-72302617 None:intergenic 25.0%
!!! TCTTTCTTTTTGATTTGACT+TGG + Chr2:72302842-72302861 MsG0280010614.01.T01:intron 25.0%
!!! TGCATAAGTTTTGGTTTAAT+TGG + Chr2:72304787-72304806 MsG0280010614.01.T01:intron 25.0%
AAGCCTAAGTGGTTTAAATT+TGG + Chr2:72306396-72306415 MsG0280010614.01.T01:intron 30.0%
AATACAAGATGAATATCGTG+AGG + Chr2:72304525-72304544 MsG0280010614.01.T01:CDS 30.0%
AATATGAACTTACAGTGAGA+AGG - Chr2:72302565-72302584 None:intergenic 30.0%
ACACAGTTAACTTTATCAAG+GGG - Chr2:72304590-72304609 None:intergenic 30.0%
ACATATTGAGTGATTTCCAT+TGG - Chr2:72303402-72303421 None:intergenic 30.0%
ACTCTATGATATATGACAAG+GGG - Chr2:72305812-72305831 None:intergenic 30.0%
AGACAAGGTGATATTGAAAT+GGG + Chr2:72302972-72302991 MsG0280010614.01.T01:CDS 30.0%
AGAGACAAAATCAATTCCAA+TGG + Chr2:72303383-72303402 MsG0280010614.01.T01:CDS 30.0%
AGCCTAAGTGGTTTAAATTT+GGG + Chr2:72306397-72306416 MsG0280010614.01.T01:intron 30.0%
ATAGTAGCTATCATAGTTGT+TGG + Chr2:72305758-72305777 MsG0280010614.01.T01:intron 30.0%
ATCACAAAGTTAACAACACA+AGG - Chr2:72304676-72304695 None:intergenic 30.0%
ATCATGACATGATTCTAAAC+CGG - Chr2:72301541-72301560 None:intergenic 30.0%
ATGACATGGACAAAATAGAT+CGG - Chr2:72306591-72306610 None:intergenic 30.0%
ATTTCCTTGTAAGTATACTC+CGG - Chr2:72306210-72306229 None:intergenic 30.0%
CAACACAGTTAACTTTATCA+AGG - Chr2:72304592-72304611 None:intergenic 30.0%
CATATCGAGTTACATAAAGT+GGG - Chr2:72307410-72307429 None:intergenic 30.0%
CATGATGATTGCCATTATAT+TGG + Chr2:72307952-72307971 MsG0280010614.01.T01:CDS 30.0%
CATTGTAACAATACCTTTCA+TGG - Chr2:72303786-72303805 None:intergenic 30.0%
CTTATTTGTTTCAGATAAGC+AGG + Chr2:72301849-72301868 MsG0280010614.01.T01:intron 30.0%
GAAAAGGATATTGATGAAGT+TGG + Chr2:72304054-72304073 MsG0280010614.01.T01:CDS 30.0%
GACTCTATGATATATGACAA+GGG - Chr2:72305813-72305832 None:intergenic 30.0%
GATCAAGAGTTAAGATTGTT+TGG - Chr2:72306348-72306367 None:intergenic 30.0%
GATTCTGCATAAAACATATC+CGG - Chr2:72304211-72304230 None:intergenic 30.0%
GCAAGTAAAGAATATGATAC+CGG + Chr2:72301489-72301508 MsG0280010614.01.T01:CDS 30.0%
GCTCATTAGTCATTAGTAAT+TGG + Chr2:72307052-72307071 MsG0280010614.01.T01:intron 30.0%
GGCAAAAACAAATGGTTATA+AGG - Chr2:72303689-72303708 None:intergenic 30.0%
GTTCAATTTGCGTTAATAAG+AGG + Chr2:72305618-72305637 MsG0280010614.01.T01:intron 30.0%
GTTTACTTACAAGAAGATCT+TGG + Chr2:72305384-72305403 MsG0280010614.01.T01:intron 30.0%
TAAATTTGGGGGAAAATGTA+AGG + Chr2:72306410-72306429 MsG0280010614.01.T01:intron 30.0%
TACATGATAAGTATAAGGCA+TGG + Chr2:72301460-72301479 MsG0280010614.01.T01:CDS 30.0%
TAGACAAGGTGATATTGAAA+TGG + Chr2:72302971-72302990 MsG0280010614.01.T01:CDS 30.0%
TATCAAAAAGAGGATGGAAA+AGG + Chr2:72304038-72304057 MsG0280010614.01.T01:CDS 30.0%
TCATATCGAGTTACATAAAG+TGG - Chr2:72307411-72307430 None:intergenic 30.0%
TGACTTGATTATTCAGTTAC+GGG + Chr2:72304699-72304718 MsG0280010614.01.T01:intron 30.0%
TGAGAAGATACACATAAACT+TGG - Chr2:72304469-72304488 None:intergenic 30.0%
TGCTGATAAACAAATTGAGA+AGG + Chr2:72303595-72303614 MsG0280010614.01.T01:intron 30.0%
TTCAATCTTAACACTGGATT+CGG + Chr2:72307690-72307709 MsG0280010614.01.T01:intron 30.0%
TTCATTATACCCTGTATGTT+TGG - Chr2:72303477-72303496 None:intergenic 30.0%
TTCCTTGACTAAAAAGTTCA+GGG + Chr2:72304383-72304402 MsG0280010614.01.T01:CDS 30.0%
TTGTCTGGTATAATCTTAGA+GGG - Chr2:72306248-72306267 None:intergenic 30.0%
TTTGTCTGGTATAATCTTAG+AGG - Chr2:72306249-72306268 None:intergenic 30.0%
! AAAGTTTAGCTCAGAAAGTT+TGG + Chr2:72305270-72305289 MsG0280010614.01.T01:intron 30.0%
! ATATTTTCCTCTATCTGTTG+TGG + Chr2:72307337-72307356 MsG0280010614.01.T01:intron 30.0%
! ATATTTTTCTTATAGGAGGG+GGG + Chr2:72305120-72305139 MsG0280010614.01.T01:intron 30.0%
! CAATTTGTTTATCAGCATCT+TGG - Chr2:72303592-72303611 None:intergenic 30.0%
! CAATTTTACCAGTATGATTC+TGG + Chr2:72302687-72302706 MsG0280010614.01.T01:intron 30.0%
! CATATTTTTCTTATAGGAGG+GGG + Chr2:72305119-72305138 MsG0280010614.01.T01:intron 30.0%
! CTGCTTATCTGAAACAAATA+AGG - Chr2:72301851-72301870 None:intergenic 30.0%
! GCAAAAAGTGCATTTAGTAA+CGG - Chr2:72303722-72303741 None:intergenic 30.0%
! GTTTCTTTAGAAGAAAACCA+AGG - Chr2:72306092-72306111 None:intergenic 30.0%
! TATCAGCTATGCATAAGTTT+TGG + Chr2:72304778-72304797 MsG0280010614.01.T01:intron 30.0%
! TGAATGTTTTGTGCTCAAAA+TGG - Chr2:72307674-72307693 None:intergenic 30.0%
! TTTTCAGATTTCCCTTGATA+TGG + Chr2:72305474-72305493 MsG0280010614.01.T01:intron 30.0%
!! TTACTAAATGCACTTTTTGC+AGG + Chr2:72303722-72303741 MsG0280010614.01.T01:intron 30.0%
!!! AATCGAATTTTTTTTCTGGG+GGG - Chr2:72302597-72302616 None:intergenic 30.0%
!!! GGATAACTTGTTTTTGTTCT+TGG - Chr2:72306327-72306346 None:intergenic 30.0%
AAACTGAGACAAAATCTACC+AGG + Chr2:72307496-72307515 MsG0280010614.01.T01:intron 35.0%
AACTAAGACTGCCATATCAA+GGG - Chr2:72305488-72305507 None:intergenic 35.0%
AACTAGATGTGATGTCAGAA+TGG - Chr2:72303967-72303986 None:intergenic 35.0%
AAGAAAAGGTAGCAATGACA+TGG - Chr2:72306605-72306624 None:intergenic 35.0%
AAGTTAACTGTGTTGCACTA+TGG + Chr2:72304597-72304616 MsG0280010614.01.T01:intron 35.0%
AAGTTGGAAAGATTGCACAT+GGG + Chr2:72304070-72304089 MsG0280010614.01.T01:CDS 35.0%
AATGAGCAGGACCAATATAA+TGG - Chr2:72307966-72307985 None:intergenic 35.0%
AATGGCATTCTGATACAAAC+AGG + Chr2:72307847-72307866 MsG0280010614.01.T01:intron 35.0%
ACAGTTGATTATACGTGTGT+GGG - Chr2:72301727-72301746 None:intergenic 35.0%
ACGTGCGTTAATATTAGTAC+TGG - Chr2:72302060-72302079 None:intergenic 35.0%
ACTGTGAAACCAAACATACA+GGG + Chr2:72303465-72303484 MsG0280010614.01.T01:CDS 35.0%
AGAAGAATTCTCGAAATGGA+TGG + Chr2:72305711-72305730 MsG0280010614.01.T01:intron 35.0%
AGACTATCTAAGTTTGATGG+TGG - Chr2:72307746-72307765 None:intergenic 35.0%
AGTGTACACTTTACGTAACA+AGG - Chr2:72301588-72301607 None:intergenic 35.0%
ATAATTCAAGTACCTGTCCT+CGG - Chr2:72304900-72304919 None:intergenic 35.0%
ATAGCTGAGAATGATGTAAG+AGG - Chr2:72304021-72304040 None:intergenic 35.0%
ATAGGGGTAAAAGAAGAGAT+TGG + Chr2:72306795-72306814 MsG0280010614.01.T01:intron 35.0%
ATAGTAACCACAACAGATAG+AGG - Chr2:72307347-72307366 None:intergenic 35.0%
ATATCATAGAGTCGTGTTGT+TGG + Chr2:72305820-72305839 MsG0280010614.01.T01:intron 35.0%
ATCCATTTCGAGAATTCTTC+TGG - Chr2:72305712-72305731 None:intergenic 35.0%
ATGTGATGTCAGAATGGAAA+AGG - Chr2:72303961-72303980 None:intergenic 35.0%
CATTCTCAGCTATCAAAAAG+AGG + Chr2:72304028-72304047 MsG0280010614.01.T01:intron 35.0%
CCTAAGTGGTTTAAATTTGG+GGG + Chr2:72306399-72306418 MsG0280010614.01.T01:intron 35.0%
CCTCTTCAGTTGAAATCAAA+TGG - Chr2:72307136-72307155 None:intergenic 35.0%
CGACTCTATGATATATGACA+AGG - Chr2:72305814-72305833 None:intergenic 35.0%
CTGGATGGATATTACTTCAA+GGG + Chr2:72301892-72301911 MsG0280010614.01.T01:intron 35.0%
CTTCTCATCTATACATGTCA+TGG - Chr2:72301641-72301660 None:intergenic 35.0%
GAAAAACAGCTTCTAGTGTT+GGG - Chr2:72304447-72304466 None:intergenic 35.0%
GCCTAAGTGGTTTAAATTTG+GGG + Chr2:72306398-72306417 MsG0280010614.01.T01:intron 35.0%
GCTTAGAACAACTTCAACTA+GGG + Chr2:72306938-72306957 MsG0280010614.01.T01:intron 35.0%
GTATAGATACACCTCAGATT+AGG + Chr2:72303094-72303113 MsG0280010614.01.T01:intron 35.0%
GTTCCTTGACTAAAAAGTTC+AGG + Chr2:72304382-72304401 MsG0280010614.01.T01:intron 35.0%
TAATGTTAACTGTGTGTGTC+TGG + Chr2:72303422-72303441 MsG0280010614.01.T01:CDS 35.0%
TACTGTGAAACCAAACATAC+AGG + Chr2:72303464-72303483 MsG0280010614.01.T01:CDS 35.0%
TCAATATCACCTTGTCTAGA+AGG - Chr2:72302969-72302988 None:intergenic 35.0%
TCATTGCCATCTTAAGTACT+CGG + Chr2:72307981-72308000 MsG0280010614.01.T01:CDS 35.0%
TCTAAACATAGACAAAAGCC+TGG + Chr2:72304229-72304248 MsG0280010614.01.T01:CDS 35.0%
TGAAACACCCAAACCTAAAT+AGG - Chr2:72302784-72302803 None:intergenic 35.0%
TGATTATGCATGTTCATAGC+TGG + Chr2:72301873-72301892 MsG0280010614.01.T01:intron 35.0%
TGATTGTACCAGAATCATAC+TGG - Chr2:72302698-72302717 None:intergenic 35.0%
TGCTTAGAACAACTTCAACT+AGG + Chr2:72306937-72306956 MsG0280010614.01.T01:intron 35.0%
TGTTACGTAAAGTGTACACT+TGG + Chr2:72301588-72301607 MsG0280010614.01.T01:CDS 35.0%
TTTCTAGATACGTCTGGTAT+GGG + Chr2:72302087-72302106 MsG0280010614.01.T01:intron 35.0%
TTTGTTAGTGAGGCTAATCA+TGG + Chr2:72302939-72302958 MsG0280010614.01.T01:CDS 35.0%
! AAAGTGAGTTGAATGTGAAG+CGG + Chr2:72303255-72303274 MsG0280010614.01.T01:CDS 35.0%
! AGGGTTCTTACGATGTTTTT+AGG + Chr2:72306957-72306976 MsG0280010614.01.T01:intron 35.0%
! ATGTTGCTTCTTGAGCTTAA+AGG + Chr2:72305075-72305094 MsG0280010614.01.T01:intron 35.0%
! CCATTTGATTTCAACTGAAG+AGG + Chr2:72307133-72307152 MsG0280010614.01.T01:intron 35.0%
! GACTATCTAAGTTTGATGGT+GGG - Chr2:72307745-72307764 None:intergenic 35.0%
! TATCATAGAGTCGTGTTGTT+GGG + Chr2:72305821-72305840 MsG0280010614.01.T01:intron 35.0%
! TCAAAGAAGCAGTTCTGATA+TGG + Chr2:72303004-72303023 MsG0280010614.01.T01:CDS 35.0%
! TGTATGTTTGGTTTCACAGT+AGG - Chr2:72303465-72303484 None:intergenic 35.0%
!! ATCCCTGAACTTTTTAGTCA+AGG - Chr2:72304388-72304407 None:intergenic 35.0%
!! CAACAAAACCAGCTTTAGAA+TGG - Chr2:72306046-72306065 None:intergenic 35.0%
!! CTCATAAGATTTTGCTGTAC+TGG + Chr2:72303852-72303871 MsG0280010614.01.T01:intron 35.0%
!! GGGTTCTTACGATGTTTTTA+GGG + Chr2:72306958-72306977 MsG0280010614.01.T01:intron 35.0%
!!! TACTTTTCTGGTTTCTTCCA+TGG - Chr2:72308017-72308036 None:intergenic 35.0%
AAAGTGTACACTTGGCAATG+CGG + Chr2:72301596-72301615 MsG0280010614.01.T01:CDS 40.0%
AAATCTACCAGGTGTAGTTC+TGG + Chr2:72307507-72307526 MsG0280010614.01.T01:intron 40.0%
AGAGTTAAATGGTGTCTAGG+TGG + Chr2:72307163-72307182 MsG0280010614.01.T01:intron 40.0%
AGAGTTTGCAAAAGAAGTCG+AGG + Chr2:72307924-72307943 MsG0280010614.01.T01:CDS 40.0%
AGATGAATATCGTGAGGTTG+TGG + Chr2:72304531-72304550 MsG0280010614.01.T01:CDS 40.0%
AGTTGGAAAGATTGCACATG+GGG + Chr2:72304071-72304090 MsG0280010614.01.T01:CDS 40.0%
ATACGACTAACTCAGTTGGT+AGG - Chr2:72302124-72302143 None:intergenic 40.0%
ATATGCGTCATTGTCTGTGT+CGG - Chr2:72303149-72303168 None:intergenic 40.0%
ATTCTTGCTCTGTCAATACC+GGG - Chr2:72304267-72304286 None:intergenic 40.0%
ATTGACCACCTGATAGAAAC+TGG + Chr2:72304832-72304851 MsG0280010614.01.T01:intron 40.0%
ATTTCAACTGAAGAGGAGAG+TGG + Chr2:72307140-72307159 MsG0280010614.01.T01:intron 40.0%
CAACTAAGACTGCCATATCA+AGG - Chr2:72305489-72305508 None:intergenic 40.0%
CACACGTATAATCAACTGTC+AGG + Chr2:72301728-72301747 MsG0280010614.01.T01:intron 40.0%
CACTGTTTCCAGTTTCTATC+AGG - Chr2:72304843-72304862 None:intergenic 40.0%
CAGAAAGTTTGGATTGTTGC+AGG + Chr2:72305281-72305300 MsG0280010614.01.T01:intron 40.0%
CATTCTTGCTCTGTCAATAC+CGG - Chr2:72304268-72304287 None:intergenic 40.0%
CCCCCAAATTTAAACCACTT+AGG - Chr2:72306402-72306421 None:intergenic 40.0%
CGTTATGCACGATATGACTA+TGG + Chr2:72301371-72301390 MsG0280010614.01.T01:CDS 40.0%
CTCAGCTATCAAAAAGAGGA+TGG + Chr2:72304032-72304051 MsG0280010614.01.T01:intron 40.0%
CTCATCTATACATGTCATGG+CGG - Chr2:72301638-72301657 None:intergenic 40.0%
CTCCAGAAGAATTCTCGAAA+TGG + Chr2:72305707-72305726 MsG0280010614.01.T01:intron 40.0%
CTTCAGGACATTGGACATTA+AGG + Chr2:72301928-72301947 MsG0280010614.01.T01:intron 40.0%
CTTTCTAGATACGTCTGGTA+TGG + Chr2:72302086-72302105 MsG0280010614.01.T01:intron 40.0%
GAAGTTGGAAAGATTGCACA+TGG + Chr2:72304069-72304088 MsG0280010614.01.T01:CDS 40.0%
GACAGTTGATTATACGTGTG+TGG - Chr2:72301728-72301747 None:intergenic 40.0%
GAGAGAGAGAGAGAGTAAAA+CGG - Chr2:72302504-72302523 None:intergenic 40.0%
GATTCTAAACCGGACGATTA+GGG - Chr2:72301531-72301550 None:intergenic 40.0%
GCTGGATGGATATTACTTCA+AGG + Chr2:72301891-72301910 MsG0280010614.01.T01:intron 40.0%
GCTTGTGACATATATTGCCT+TGG + Chr2:72306072-72306091 MsG0280010614.01.T01:intron 40.0%
GGAAAAACAGCTTCTAGTGT+TGG - Chr2:72304448-72304467 None:intergenic 40.0%
GGGGATAGAAACTGACAATT+TGG - Chr2:72306175-72306194 None:intergenic 40.0%
GTAACATTTCAGAACGTCAG+TGG - Chr2:72307437-72307456 None:intergenic 40.0%
GTCAAGGAACTGCAATTTCA+AGG - Chr2:72304372-72304391 None:intergenic 40.0%
GTGAATACGACTAACTCAGT+TGG - Chr2:72302128-72302147 None:intergenic 40.0%
GTGGAGAGAAGAGTTATTAC+AGG + Chr2:72304550-72304569 MsG0280010614.01.T01:CDS 40.0%
GTGTTTCAGACAAACATACC+TGG - Chr2:72304425-72304444 None:intergenic 40.0%
TACTTAAGATGGCAATGAGC+AGG - Chr2:72307979-72307998 None:intergenic 40.0%
TATGCATGTTCATAGCTGGA+TGG + Chr2:72301877-72301896 MsG0280010614.01.T01:intron 40.0%
TCATCTCATGGACGAGATAT+TGG + Chr2:72305032-72305051 MsG0280010614.01.T01:intron 40.0%
TGATTCTAAACCGGACGATT+AGG - Chr2:72301532-72301551 None:intergenic 40.0%
TGGAGAGTTAAATGGTGTCT+AGG + Chr2:72307160-72307179 MsG0280010614.01.T01:intron 40.0%
TGTACTTCCAGACAGTTACT+AGG + Chr2:72306299-72306318 MsG0280010614.01.T01:intron 40.0%
TGTTTCCAGTTTCTATCAGG+TGG - Chr2:72304840-72304859 None:intergenic 40.0%
TTACTGCTCATCATCTTGTG+AGG + Chr2:72307246-72307265 MsG0280010614.01.T01:intron 40.0%
TTTAGACAACATCGAAAGCC+AGG + Chr2:72305525-72305544 MsG0280010614.01.T01:CDS 40.0%
! AAATGGTGTCTAGGTGGTTT+TGG + Chr2:72307169-72307188 MsG0280010614.01.T01:intron 40.0%
! AATGGTGTCTAGGTGGTTTT+GGG + Chr2:72307170-72307189 MsG0280010614.01.T01:intron 40.0%
! ACTTTTTGCAGGAAGCTATG+AGG + Chr2:72303733-72303752 MsG0280010614.01.T01:intron 40.0%
! ATGTTTGGTTTCACAGTAGG+AGG - Chr2:72303462-72303481 None:intergenic 40.0%
! CGTTAATAAGAGGCTTGTTC+AGG + Chr2:72305628-72305647 MsG0280010614.01.T01:intron 40.0%
! CTGGAAGTACACTTTCGAAT+GGG - Chr2:72306290-72306309 None:intergenic 40.0%
! GAAGCAGTTCTGATATGGAA+TGG + Chr2:72303009-72303028 MsG0280010614.01.T01:CDS 40.0%
! GAGCACTGTAGAAGAAATTC+AGG + Chr2:72305308-72305327 MsG0280010614.01.T01:CDS 40.0%
! GCAGGATTCATTTGTTAGTG+AGG + Chr2:72302929-72302948 MsG0280010614.01.T01:intron 40.0%
! TCTGGAAGTACACTTTCGAA+TGG - Chr2:72306291-72306310 None:intergenic 40.0%
! TGCCTATAGCCTAGGTTTTA+GGG + Chr2:72301793-72301812 MsG0280010614.01.T01:intron 40.0%
! TTGCCTATAGCCTAGGTTTT+AGG + Chr2:72301792-72301811 MsG0280010614.01.T01:intron 40.0%
! TTTTACTCCAGAACTACACC+TGG - Chr2:72307517-72307536 None:intergenic 40.0%
!! AACTAGCTCTGATCAAGCAT+TGG - Chr2:72306372-72306391 None:intergenic 40.0%
!! ACAAAAGCATCTGCCATGAA+AGG + Chr2:72303770-72303789 MsG0280010614.01.T01:CDS 40.0%
!! ACCAGCTTTAGAATGGTACA+AGG - Chr2:72306039-72306058 None:intergenic 40.0%
!! GTTGTTCTAAGCATCGAGAT+AGG - Chr2:72306930-72306949 None:intergenic 40.0%
!! TCCTTGTACCATTCTAAAGC+TGG + Chr2:72306035-72306054 MsG0280010614.01.T01:intron 40.0%
!! TTTGATGGTGGGAAAGAAAC+TGG - Chr2:72307734-72307753 None:intergenic 40.0%
!!! CTCAGTTTTGAGCAACATGA+GGG - Chr2:72307484-72307503 None:intergenic 40.0%
!!! CTTTAGCTTTTGAAGTAGCG+CGG - Chr2:72303624-72303643 None:intergenic 40.0%
!!! TCAGTTTTGAGCAACATGAG+GGG - Chr2:72307483-72307502 None:intergenic 40.0%
!!! TCTCAGTTTTGAGCAACATG+AGG - Chr2:72307485-72307504 None:intergenic 40.0%
ACAAAAGCCTGGCTGTGAAA+GGG + Chr2:72304240-72304259 MsG0280010614.01.T01:CDS 45.0%
ACCACACCGAGTACTTAAGA+TGG - Chr2:72307990-72308009 None:intergenic 45.0%
ACCAGAAGATAGCTTCTGGT+GGG + Chr2:72307545-72307564 MsG0280010614.01.T01:intron 45.0%
ACGAGATATTGGTGTGGTGA+TGG + Chr2:72305043-72305062 MsG0280010614.01.T01:intron 45.0%
ACTAGACAGATGATGAGGTG+AGG + Chr2:72304723-72304742 MsG0280010614.01.T01:intron 45.0%
AGACACCAGAAGATAGCTTC+TGG + Chr2:72307541-72307560 MsG0280010614.01.T01:intron 45.0%
AGTATACTCCGGACACATGT+TGG - Chr2:72306199-72306218 None:intergenic 45.0%
AGTGAGTTCCCCTAAAACCT+AGG - Chr2:72301805-72301824 None:intergenic 45.0%
ATGATACCGGTGACGATCTT+AGG + Chr2:72301502-72301521 MsG0280010614.01.T01:CDS 45.0%
CAGGTTGTAAAGTAGACACG+TGG + Chr2:72301747-72301766 MsG0280010614.01.T01:intron 45.0%
CATGGACAACCTTCTAGACA+AGG + Chr2:72302957-72302976 MsG0280010614.01.T01:CDS 45.0%
CCAGACGTATCTAGAAAGTC+TGG - Chr2:72302084-72302103 None:intergenic 45.0%
CCAGACTTTCTAGATACGTC+TGG + Chr2:72302081-72302100 MsG0280010614.01.T01:intron 45.0%
CGAGATATTGGTGTGGTGAT+GGG + Chr2:72305044-72305063 MsG0280010614.01.T01:intron 45.0%
CGCGCTACTTCAAAAGCTAA+AGG + Chr2:72303622-72303641 MsG0280010614.01.T01:intron 45.0%
CTTAGGTTTCCCTAATCGTC+CGG + Chr2:72301519-72301538 MsG0280010614.01.T01:intron 45.0%
GAGGAGAGTGGAGAGTTAAA+TGG + Chr2:72307152-72307171 MsG0280010614.01.T01:intron 45.0%
GATGACGAAGACACAAAACC+TGG - Chr2:72305546-72305565 None:intergenic 45.0%
GCAACTGATCATGTGAAGTC+AGG + Chr2:72307878-72307897 MsG0280010614.01.T01:CDS 45.0%
GCTAGTTCGATAAGCCTAAG+TGG + Chr2:72306385-72306404 MsG0280010614.01.T01:intron 45.0%
GGATCTCATGACAGATTTCC+AGG + Chr2:72304404-72304423 MsG0280010614.01.T01:CDS 45.0%
GGCATTCTGATACAAACAGG+TGG + Chr2:72307850-72307869 MsG0280010614.01.T01:intron 45.0%
GGGGACTAAGAATTCTTCCA+AGG - Chr2:72305793-72305812 None:intergenic 45.0%
GTATACTCCGGACACATGTT+GGG - Chr2:72306198-72306217 None:intergenic 45.0%
GTGGGACTTGCATACTTAGA+CGG - Chr2:72301709-72301728 None:intergenic 45.0%
GTGTCCGGAGTATACTTACA+AGG + Chr2:72306203-72306222 MsG0280010614.01.T01:intron 45.0%
TACACTTGGCAATGCGGTTT+AGG + Chr2:72301602-72301621 MsG0280010614.01.T01:intron 45.0%
TAGGCTATAGGCAACCTCAA+GGG - Chr2:72301786-72301805 None:intergenic 45.0%
TATACTCCGGACACATGTTG+GGG - Chr2:72306197-72306216 None:intergenic 45.0%
TCATGGACGAGATATTGGTG+TGG + Chr2:72305037-72305056 MsG0280010614.01.T01:intron 45.0%
TCCCCTAAAACCTAGGCTAT+AGG - Chr2:72301798-72301817 None:intergenic 45.0%
TGTTGAGAGAGAGAGTTCGT+GGG + Chr2:72302413-72302432 MsG0280010614.01.T01:intron 45.0%
TTCGTACTGCTTCAGGACAT+TGG + Chr2:72301919-72301938 MsG0280010614.01.T01:intron 45.0%
TTCTTGCTCTGTCAATACCG+GGG - Chr2:72304266-72304285 None:intergenic 45.0%
TTGTCTGTGTCGGACATGAT+AGG - Chr2:72303139-72303158 None:intergenic 45.0%
TTGTTGAGAGAGAGAGTTCG+TGG + Chr2:72302412-72302431 MsG0280010614.01.T01:intron 45.0%
! GCAGTCTTAGTTGATGCTCA+AGG + Chr2:72305496-72305515 MsG0280010614.01.T01:CDS 45.0%
! TTTGAAGTGCGTTGTCTCTC+TGG - Chr2:72305676-72305695 None:intergenic 45.0%
! TTTTGAGCAACATGAGGGGA+GGG - Chr2:72307479-72307498 None:intergenic 45.0%
!! GCCTATAGCCTAGGTTTTAG+GGG + Chr2:72301794-72301813 MsG0280010614.01.T01:intron 45.0%
!! GCTGTACTGGTTACTGAATC+AGG + Chr2:72303865-72303884 MsG0280010614.01.T01:intron 45.0%
!! GTTCTAAGCATCGAGATAGG+AGG - Chr2:72306927-72306946 None:intergenic 45.0%
!! ATAAAAACAAATTTATATAT+AGG + Chr2:72306777-72306796 MsG0280010614.01.T01:intron 5.0%
!! GATAAAAAAAAAAAAAATTT+AGG + Chr2:72307012-72307031 MsG0280010614.01.T01:intron 5.0%
!! TAAAAACAAATTTATATATA+GGG + Chr2:72306778-72306797 MsG0280010614.01.T01:intron 5.0%
AACGACAGCGATGTTAAGCG+AGG - Chr2:72302442-72302461 None:intergenic 50.0%
ACCCACCAGAAGCTATCTTC+TGG - Chr2:72307549-72307568 None:intergenic 50.0%
ATACATGTCATGGCGGTCGA+AGG - Chr2:72301631-72301650 None:intergenic 50.0%
ATACTCCGGACACATGTTGG+GGG - Chr2:72306196-72306215 None:intergenic 50.0%
ATAGGCTTTCGGAGCAGTAC+GGG + Chr2:72307570-72307589 MsG0280010614.01.T01:intron 50.0%
CACCAGAAGATAGCTTCTGG+TGG + Chr2:72307544-72307563 MsG0280010614.01.T01:intron 50.0%
CAGCAGGCAATTCTTGAAGC+AGG + Chr2:72304874-72304893 MsG0280010614.01.T01:intron 50.0%
CAGTGAGCAAATCTTCCAGC+AGG + Chr2:72304858-72304877 MsG0280010614.01.T01:intron 50.0%
CATGATAGGTATCCGACACC+AGG - Chr2:72303125-72303144 None:intergenic 50.0%
CGGGAACTAGACAGATGATG+AGG + Chr2:72304718-72304737 MsG0280010614.01.T01:intron 50.0%
CTAGGCTATAGGCAACCTCA+AGG - Chr2:72301787-72301806 None:intergenic 50.0%
CTGCTCATCATCTTGTGAGG+AGG + Chr2:72307249-72307268 MsG0280010614.01.T01:intron 50.0%
CTGCTTCAAGAATTGCCTGC+TGG - Chr2:72304876-72304895 None:intergenic 50.0%
CTTGAGGTTGCCTATAGCCT+AGG + Chr2:72301785-72301804 MsG0280010614.01.T01:intron 50.0%
CTTGGAGCCTAGTAACTGTC+TGG - Chr2:72306309-72306328 None:intergenic 50.0%
GACAAAAGCCTGGCTGTGAA+AGG + Chr2:72304239-72304258 MsG0280010614.01.T01:CDS 50.0%
GATAGGCTTTCGGAGCAGTA+CGG + Chr2:72307569-72307588 MsG0280010614.01.T01:intron 50.0%
GCAACCTCAAGGGAAACCTA+CGG - Chr2:72301776-72301795 None:intergenic 50.0%
GGGAAACCTAAGATCGTCAC+CGG - Chr2:72301511-72301530 None:intergenic 50.0%
GTTGTTGGCGTTCTCAACCT+TGG + Chr2:72305773-72305792 MsG0280010614.01.T01:intron 50.0%
TACATGTCATGGCGGTCGAA+GGG - Chr2:72301630-72301649 None:intergenic 50.0%
TGTTCGTGTCTGTGCTGCAT+AGG + Chr2:72303192-72303211 MsG0280010614.01.T01:intron 50.0%
! AAAGCATTTGCATGCGTCGG+CGG + Chr2:72305844-72305863 MsG0280010614.01.T01:intron 50.0%
! GATAGCTTCTGGTGGGTGAT+AGG + Chr2:72307552-72307571 MsG0280010614.01.T01:intron 50.0%
! GCCATCTTAAGTACTCGGTG+TGG + Chr2:72307986-72308005 MsG0280010614.01.T01:CDS 50.0%
! TCTGGTGGGTGATAGGCTTT+CGG + Chr2:72307559-72307578 MsG0280010614.01.T01:intron 50.0%
!! GGGAAAGCATTTGCATGCGT+CGG + Chr2:72305841-72305860 MsG0280010614.01.T01:intron 50.0%
!! GTTTTGAGCAACATGAGGGG+AGG - Chr2:72307480-72307499 None:intergenic 50.0%
!! TACTCGGTGTGGTGAAACCA+TGG + Chr2:72307997-72308016 MsG0280010614.01.T01:CDS 50.0%
ACCAGGACACGCCTAATCTG+AGG - Chr2:72303108-72303127 None:intergenic 55.0%
ACCTCAGATTAGGCGTGTCC+TGG + Chr2:72303104-72303123 MsG0280010614.01.T01:intron 55.0%
AGTAGACACGTGGTGACCGT+AGG + Chr2:72301757-72301776 MsG0280010614.01.T01:intron 55.0%
GATTAGGCGTGTCCTGGTGT+CGG + Chr2:72303110-72303129 MsG0280010614.01.T01:intron 55.0%
GCAATTCTTGAAGCAGGCCG+AGG + Chr2:72304880-72304899 MsG0280010614.01.T01:intron 55.0%
GGGTTCGTTCGTACTGCTTC+AGG + Chr2:72301912-72301931 MsG0280010614.01.T01:intron 55.0%
GTGACCGTAGGTTTCCCTTG+AGG + Chr2:72301769-72301788 MsG0280010614.01.T01:intron 55.0%
TACTCCGGACACATGTTGGG+GGG - Chr2:72306195-72306214 None:intergenic 55.0%
TATCCCCCCCAACATGTGTC+CGG + Chr2:72306188-72306207 MsG0280010614.01.T01:intron 55.0%
! AAGCATTTGCATGCGTCGGC+GGG + Chr2:72305845-72305864 MsG0280010614.01.T01:intron 55.0%
ACTCCGGACACATGTTGGGG+GGG - Chr2:72306194-72306213 None:intergenic 60.0%
CGGCGGGAACATCTTAGAGC+AGG + Chr2:72305861-72305880 MsG0280010614.01.T01:intron 60.0%
TCTTGAAGCAGGCCGAGGAC+AGG + Chr2:72304885-72304904 MsG0280010614.01.T01:intron 60.0%
ACCGGGGCCCTTTCACAGCC+AGG - Chr2:72304250-72304269 None:intergenic 70.0%
GCCTGGCTGTGAAAGGGCCC+CGG + Chr2:72304246-72304265 MsG0280010614.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 72301354 72308042 72301354 ID=MsG0280010614.01;Name=MsG0280010614.01
Chr2 mRNA 72301354 72308042 72301354 ID=MsG0280010614.01.T01;Parent=MsG0280010614.01;Name=MsG0280010614.01.T01;_AED=0.51;_eAED=0.53;_QI=0|0.33|0.53|0.69|1|1|13|0|367
Chr2 exon 72301354 72301523 72301354 ID=MsG0280010614.01.T01:exon:15260;Parent=MsG0280010614.01.T01
Chr2 exon 72301584 72301617 72301584 ID=MsG0280010614.01.T01:exon:15261;Parent=MsG0280010614.01.T01
Chr2 exon 72302933 72303048 72302933 ID=MsG0280010614.01.T01:exon:15262;Parent=MsG0280010614.01.T01
Chr2 exon 72303214 72303276 72303214 ID=MsG0280010614.01.T01:exon:15263;Parent=MsG0280010614.01.T01
Chr2 exon 72303368 72303486 72303368 ID=MsG0280010614.01.T01:exon:15264;Parent=MsG0280010614.01.T01
Chr2 exon 72303744 72303791 72303744 ID=MsG0280010614.01.T01:exon:15265;Parent=MsG0280010614.01.T01
Chr2 exon 72304037 72304125 72304037 ID=MsG0280010614.01.T01:exon:15266;Parent=MsG0280010614.01.T01
Chr2 exon 72304227 72304267 72304227 ID=MsG0280010614.01.T01:exon:15267;Parent=MsG0280010614.01.T01
Chr2 exon 72304383 72304425 72304383 ID=MsG0280010614.01.T01:exon:15268;Parent=MsG0280010614.01.T01
Chr2 exon 72304512 72304571 72304512 ID=MsG0280010614.01.T01:exon:15269;Parent=MsG0280010614.01.T01
Chr2 exon 72305303 72305383 72305303 ID=MsG0280010614.01.T01:exon:15270;Parent=MsG0280010614.01.T01
Chr2 exon 72305481 72305546 72305481 ID=MsG0280010614.01.T01:exon:15271;Parent=MsG0280010614.01.T01
Chr2 exon 72307869 72308042 72307869 ID=MsG0280010614.01.T01:exon:15272;Parent=MsG0280010614.01.T01
Chr2 CDS 72301354 72301523 72301354 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72301584 72301617 72301584 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72302933 72303048 72302933 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72303214 72303276 72303214 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72303368 72303486 72303368 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72303744 72303791 72303744 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72304037 72304125 72304037 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72304227 72304267 72304227 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72304383 72304425 72304383 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72304512 72304571 72304512 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72305303 72305383 72305303 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72305481 72305546 72305481 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Chr2 CDS 72307869 72308042 72307869 ID=MsG0280010614.01.T01:cds;Parent=MsG0280010614.01.T01
Gene Sequence

>MsG0280010614.01.T01

ATGAATGAACTTAGATACGTTATGCACGATATGACTATGGTTAAGTTTCATGATTATGCAAGAATGAACTTATGCACATTTATGTTTAAGAACAAGAGCACTATGCTACATGATAAGTATAAGGCATGGATTAGAGCAAGTAAAGAATATGATACCGGTGACGATCTTAGGCCTTGTTACGTAAAGTGTACACTTGGCAATGCGGATTCATTTGTTAGTGAGGCTAATCATGGACAACCTTCTAGACAAGGTGATATTGAAATGGGATTGCAAGATCAAAGAAGCAGTTCTGATATGGAATGGAAGCTTTTAATAAACAGGACTTATGCAACATTTGAATTTGTAAAATTGATTCTAGTTAAAAGTGAGTTGAATGTGAAGCGAATCAATTCTAGACTAGAGACAAAATCAATTCCAATGGAAATCACTCAATATGTTAATGTTAACTGTGTGTGTCTGGAATCACTTTTGACTCCTCCTACTGTGAAACCAAACATACAGGGAAGCTATGAGGAATCAAAAGCTGTTACAAAAGCATCTGCCATGAAAGCTATCAAAAAGAGGATGGAAAAGGATATTGATGAAGTTGGAAAGATTGCACATGGGGTCAAAGCAAAAATTGAAGCTATCAATAGAGAAAATCTAAACATAGACAAAAGCCTGGCTGTGAAAGGGCCCCGTTCCTTGACTAAAAAGTTCAGGGATCTCATGACAGATTTCCAGACTCTCAGACAAGAATACAAGATGAATATCGTGAGGTTGTGGAGAGAAGAGTTATTACAGGTTGTGAGCACTGTAGAAGAAATTCAGGAGAGACATGATGCTGTGAAAGAAATTGAGAAAAAACTTCTTGATTTACATCAGATTTCCCTTGATATGGCAGTCTTAGTTGATGCTCAAGGAGAAATTTTAGACAACATCGAAAGCCAGGTGGCAAATGCAACTGATCATGTGAAGTCAGGTAACGATGCTCTACATACTGCAAAGAGTTTGCAAAAGAAGTCGAGGAAATGCATGATGATTGCCATTATATTGGTCCTGCTCATTGCCATCTTAAGTACTCGGTGTGGTGAAACCATGGAAGAAACCAGAAAAGTAAAGTAA

Protein sequence

>MsG0280010614.01.T01

MNELRYVMHDMTMVKFHDYARMNLCTFMFKNKSTMLHDKYKAWIRASKEYDTGDDLRPCYVKCTLGNADSFVSEANHGQPSRQGDIEMGLQDQRSSSDMEWKLLINRTYATFEFVKLILVKSELNVKRINSRLETKSIPMEITQYVNVNCVCLESLLTPPTVKPNIQGSYEESKAVTKASAMKAIKKRMEKDIDEVGKIAHGVKAKIEAINRENLNIDKSLAVKGPRSLTKKFRDLMTDFQTLRQEYKMNIVRLWREELLQVVSTVEEIQERHDAVKEIEKKLLDLHQISLDMAVLVDAQGEILDNIESQVANATDHVKSGNDALHTAKSLQKKSRKCMMIAIILVLLIAILSTRCGETMEETRKVK*