AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040505.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040505.01.T01 MTR_7g091650 92.938 439 6 1 1 439 1 414 0.0 827
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040505.01.T01 AT2G19560 71.754 439 98 2 1 439 1 413 0.0 628
MsG0780040505.01.T01 AT2G19560 74.631 339 60 2 101 439 2 314 0.0 508

Find 103 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATTCAAGATTTACTTTA+AGG 0.080216 7:-78482545 MsG0780040505.01.T01:intron
ACGTCGTTGCTTACGAAATT+AGG 0.103949 7:-78484700 MsG0780040505.01.T01:CDS
GACCCTTTCCCCAAGTTAAA+TGG 0.224511 7:-78479689 MsG0780040505.01.T01:CDS
GTTATAGGCTTCAACGAAAT+TGG 0.231468 7:+78484890 None:intergenic
ATATTGTACAAGCTCTAAAA+AGG 0.257192 7:-78480333 MsG0780040505.01.T01:CDS
TTGTTCAGGAATTTCGTAAT+TGG 0.261819 7:-78484751 MsG0780040505.01.T01:CDS
TTGATTGTATTCCAGGTAAA+AGG 0.270860 7:-78482604 MsG0780040505.01.T01:intron
ATTCTAACCTTGTCTCTATT+AGG 0.271778 7:+78482269 None:intergenic
CGGCCATAGGTTTGTTGTAT+TGG 0.281910 7:-78479564 MsG0780040505.01.T01:three_prime_UTR
TTTACCAGTCCTCGTGATAT+TGG 0.284705 7:+78480281 None:intergenic
ACCAGAATTAAACCTTATAT+TGG 0.293079 7:+78481732 None:intergenic
CGTCGTTGCTTACGAAATTA+GGG 0.306448 7:-78484699 MsG0780040505.01.T01:CDS
TAATAACTTAAACAAATTAC+AGG 0.345456 7:+78479269 None:intergenic
AACAGCATGAAGCCAATATA+AGG 0.349869 7:-78481744 MsG0780040505.01.T01:intron
AAATTCCTCAAAATCAAATA+TGG 0.357145 7:+78482292 None:intergenic
ATTTGAGAGAGATGCCGTTT+TGG 0.366232 7:+78485075 None:intergenic
GGAGAAACGGTTGAGGTATT+CGG 0.366603 7:+78485112 None:intergenic
AGCTGCAAAACATTTGTTGA+TGG 0.366918 7:+78482368 None:intergenic
TTTAACAACAAGAACACATT+CGG 0.370856 7:+78479527 None:intergenic
TTCACCTGGTGAGCTCTGCT+TGG 0.378378 7:+78479978 None:intergenic
CACCTCGAAATTTAGAATCA+TGG 0.378473 7:+78479632 None:intergenic
TGGTTTAGTTTCCACTTGTA+TGG 0.384486 7:-78479428 MsG0780040505.01.T01:three_prime_UTR
TGTTCAGGAATTTCGTAATT+GGG 0.401599 7:-78484750 MsG0780040505.01.T01:CDS
AATTAGGGTTCTTGCTGAAA+AGG 0.404518 7:-78484684 MsG0780040505.01.T01:intron
AAGATTCTTGTGTATCAGTA+TGG 0.406611 7:+78479763 None:intergenic
CAGAGCTCACCAGGTGAAGT+TGG 0.407918 7:-78479973 MsG0780040505.01.T01:CDS
TCACTAGTGAACCACATGTT+AGG 0.410487 7:+78479295 None:intergenic
TTAACAACAAGAACACATTC+GGG 0.415211 7:+78479528 None:intergenic
TTCCATTTAACTTGGGGAAA+GGG 0.416354 7:+78479687 None:intergenic
AGAGAGAAGGAAGTGGGAGT+TGG 0.416612 7:+78485034 None:intergenic
ATTCCAGTGAAGCTTTCAAT+AGG 0.418462 7:-78481246 MsG0780040505.01.T01:CDS
CTTCTCCAAGAGCCTGTGAT+TGG 0.422456 7:+78481215 None:intergenic
GACAGACAATTGGCTGCAAA+TGG 0.428454 7:-78483401 MsG0780040505.01.T01:CDS
ACATCTTCTTTACTAATCTC+TGG 0.429870 7:+78480122 None:intergenic
TCACCTGGTGAGCTCTGCTT+GGG 0.437488 7:+78479979 None:intergenic
CTGTTGGTTGCAATGCTTCA+AGG 0.445629 7:+78481762 None:intergenic
CCAGCACCTTTCAACTTCTC+AGG 0.448793 7:+78483371 None:intergenic
CAAGAAAGCCTGGCAATAGC+AGG 0.449826 7:-78479609 MsG0780040505.01.T01:three_prime_UTR
AGACCCAAGCAGAGCTCACC+AGG 0.451286 7:-78479982 MsG0780040505.01.T01:CDS
ATGCCTATTGAAAGCTTCAC+TGG 0.454323 7:+78481243 None:intergenic
TTCTCCAAGAGCCTGTGATT+GGG 0.457016 7:+78481216 None:intergenic
ACCTGTCAATTCATGAGGAC+TGG 0.458515 7:-78479663 MsG0780040505.01.T01:exon
GTCACTTACATGTACTATAC+TGG 0.463654 7:-78482148 MsG0780040505.01.T01:CDS
TGAAAGGGTTCTTCGGCCAT+AGG 0.467348 7:-78479577 MsG0780040505.01.T01:three_prime_UTR
TCCAGTCCTCATGAATTGAC+AGG 0.469275 7:+78479662 None:intergenic
GGGGCGATCCTCAACTTCTT+CGG 0.477985 7:-78480312 MsG0780040505.01.T01:CDS
TATGTCAACAATAATAATAT+CGG 0.481626 7:+78479332 None:intergenic
AAGCTGATTAAACATTATGA+TGG 0.483635 7:+78479238 None:intergenic
TTATTGTTAAAGCATTGAAA+TGG 0.486233 7:-78479947 MsG0780040505.01.T01:CDS
CTTGAAGTTCTACCTTCTCT+AGG 0.487820 7:+78480149 None:intergenic
CCTGAGAAGTTGAAAGGTGC+TGG 0.489843 7:-78483371 MsG0780040505.01.T01:CDS
TTATATTGGCTTCATGCTGT+TGG 0.491818 7:+78481746 None:intergenic
TATTCTTGCAATTTAGATTG+TGG 0.494659 7:-78479448 MsG0780040505.01.T01:three_prime_UTR
TGTTGAAGTGATCGGAAAAG+AGG 0.496197 7:+78484924 None:intergenic
ATTGCCCAATCACAGGCTCT+TGG 0.498484 7:-78481220 MsG0780040505.01.T01:CDS
TTTGCAGGTAGAGTGTATAA+TGG 0.498834 7:-78479786 MsG0780040505.01.T01:intron
ACCTCGAAATTTAGAATCAT+GGG 0.503168 7:+78479633 None:intergenic
TTCTTATTATACTGCGGCAA+AGG 0.505154 7:+78482333 None:intergenic
TTTCGAGGTGCAAGAAAGCC+TGG 0.509157 7:-78479619 MsG0780040505.01.T01:three_prime_UTR
ACCCATGATTCTAAATTTCG+AGG 0.511437 7:-78479634 MsG0780040505.01.T01:three_prime_UTR
AAAATTACCCTGCTATTGCC+AGG 0.512201 7:+78479601 None:intergenic
ATAAGGGCTAGCAGTGGAAG+TGG 0.513174 7:-78479394 MsG0780040505.01.T01:three_prime_UTR
TTTCCATTTAACTTGGGGAA+AGG 0.515780 7:+78479686 None:intergenic
GTTGCAATGCTTCAAGGCAT+AGG 0.517547 7:+78481768 None:intergenic
GTTTATAGTGTTGAAGTGAT+CGG 0.519681 7:+78484916 None:intergenic
CAATAACCTCCAACTTCACC+TGG 0.530433 7:+78479964 None:intergenic
AACAATGGCGTATTTGAGCA+TGG 0.533509 7:-78485156 MsG0780040505.01.T01:exon
ATGAAACGGCGTCGGAGAAA+CGG 0.534306 7:+78485099 None:intergenic
CGGCGAGAGAGAGAAGGAAG+TGG 0.544385 7:+78485027 None:intergenic
CACTCCAATATCACGAGGAC+TGG 0.550692 7:-78480285 MsG0780040505.01.T01:intron
AAAACATACAACCATACAAG+TGG 0.554205 7:+78479417 None:intergenic
AATTGACATGGATGTGGATG+AGG 0.555159 7:-78479919 MsG0780040505.01.T01:intron
CATCCAATACAACAAACCTA+TGG 0.555335 7:+78479561 None:intergenic
TAGGCATATTGCCCAATCAC+AGG 0.563533 7:-78481227 MsG0780040505.01.T01:CDS
GCTTGAAATTGACATGGATG+TGG 0.568571 7:-78479925 MsG0780040505.01.T01:CDS
GTAAAAGGTGCTAAGCGTGT+TGG 0.576657 7:-78482589 MsG0780040505.01.T01:CDS
GGCGAGAGAGAGAAGGAAGT+GGG 0.582230 7:+78485028 None:intergenic
CAATACTTCTTATTATACTG+CGG 0.586087 7:+78482327 None:intergenic
AGCTCACCAGGTGAAGTTGG+AGG 0.588477 7:-78479970 MsG0780040505.01.T01:CDS
ACAATGGCGTATTTGAGCAT+GGG 0.590947 7:-78485155 MsG0780040505.01.T01:CDS
AAATCTCCTGAGAAGTTGAA+AGG 0.593067 7:-78483377 MsG0780040505.01.T01:CDS
CGGCGTCGGAGAAACGGTTG+AGG 0.594594 7:+78485105 None:intergenic
AGTGCAGACCGAAGAAGTTG+AGG 0.599498 7:+78480304 None:intergenic
GGAAAACCTGTCAATTCATG+AGG 0.601097 7:-78479668 MsG0780040505.01.T01:exon
CTTTGCCCACAAAAGCAAAG+TGG 0.605507 7:-78479729 MsG0780040505.01.T01:CDS
GAGCGTCGGCGAGAGAGAGA+AGG 0.610417 7:+78485021 None:intergenic
TGTATATCTTGTCCTAGAGA+AGG 0.611998 7:-78480161 MsG0780040505.01.T01:CDS
ATACACAAGAATCTTGTGAA+AGG 0.613044 7:-78479755 MsG0780040505.01.T01:CDS
GTCGATTGAAGTCGTTGACG+AGG 0.613533 7:+78484994 None:intergenic
GACGCCGTTTCATACCAAAA+CGG 0.616324 7:-78485089 MsG0780040505.01.T01:CDS
TCGTAATTGGGAATCCGCGT+GGG 0.619302 7:-78484738 MsG0780040505.01.T01:CDS
TTCGTAATTGGGAATCCGCG+TGG 0.623906 7:-78484739 MsG0780040505.01.T01:CDS
CTTTCTTCGAAGATCAACAA+TGG 0.631214 7:-78485171 MsG0780040505.01.T01:exon
GGAGAAGTACAATCTACTTG+AGG 0.637346 7:-78481199 MsG0780040505.01.T01:intron
AAGAAAGCCTGGCAATAGCA+GGG 0.645256 7:-78479608 MsG0780040505.01.T01:three_prime_UTR
TACAGCTTCAAGAGCCCACG+CGG 0.650017 7:+78484724 None:intergenic
GGAATTTCCTAATAGAGACA+AGG 0.655538 7:-78482276 MsG0780040505.01.T01:intron
GTTGACGAGGATGAGAGCGT+CGG 0.661085 7:+78485007 None:intergenic
TAACAACAAGAACACATTCG+GGG 0.668941 7:+78479529 None:intergenic
AACAACAAGAACACATTCGG+GGG 0.669743 7:+78479530 None:intergenic
GAAATGGCTTGAAATTGACA+TGG 0.673583 7:-78479931 MsG0780040505.01.T01:CDS
GTCTGCACTCCAATATCACG+AGG 0.694419 7:-78480290 MsG0780040505.01.T01:CDS
ACTACTGAGAACCTAACATG+TGG 0.713877 7:-78479306 MsG0780040505.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCATAAAGATAAATAATA+TGG + Chr7:78482257-78482276 None:intergenic 10.0%
!!! ATTGTAAAATTTTAAACAAA+AGG + Chr7:78483559-78483578 None:intergenic 10.0%
!!! TAAGTAATTATTTTTTCTTT+TGG - Chr7:78484066-78484085 MsG0780040505.01.T01:intron 10.0%
!!! TTGTAAAATTTTAAACAAAA+GGG + Chr7:78483558-78483577 None:intergenic 10.0%
!! ATCTTTCAAAAAACAAATAA+AGG - Chr7:78484586-78484605 MsG0780040505.01.T01:intron 15.0%
!! TAATAACTTAAACAAATTAC+AGG + Chr7:78485167-78485186 None:intergenic 15.0%
!! TATGTCAACAATAATAATAT+CGG + Chr7:78485104-78485123 None:intergenic 15.0%
!! TCTTAGCAAATTAAAAAAAA+GGG + Chr7:78483865-78483884 None:intergenic 15.0%
!! TTCTTAGCAAATTAAAAAAA+AGG + Chr7:78483866-78483885 None:intergenic 15.0%
!!! ATTGAATTCATATTTTTTGT+AGG - Chr7:78484235-78484254 MsG0780040505.01.T01:intron 15.0%
!!! ATTTATACATTTATTTCTTC+TGG + Chr7:78483457-78483476 None:intergenic 15.0%
!!! TGTAAAATTTTAAACAAAAG+GGG + Chr7:78483557-78483576 None:intergenic 15.0%
!! AAAGTAAAGTGATTTATGTT+TGG + Chr7:78480029-78480048 None:intergenic 20.0%
!! AAATATTATATCACAAAGAG+TGG + Chr7:78483584-78483603 None:intergenic 20.0%
!! AAATTCCTCAAAATCAAATA+TGG + Chr7:78482144-78482163 None:intergenic 20.0%
!! AAATTTAGATTACTTACAGA+AGG + Chr7:78482339-78482358 None:intergenic 20.0%
!! AATTTATTCTACTTGAAGTT+GGG + Chr7:78480585-78480604 None:intergenic 20.0%
!! ACAAATGTAAACTCTATAAA+TGG + Chr7:78482619-78482638 None:intergenic 20.0%
!! CTTGGATTTCAAATTAAAAT+AGG + Chr7:78481143-78481162 None:intergenic 20.0%
!! GATATAAACAAATTGAAAGT+AGG + Chr7:78484569-78484588 None:intergenic 20.0%
!! GTTATTCAAGATTTACTTTA+AGG - Chr7:78481888-78481907 MsG0780040505.01.T01:intron 20.0%
!! TTATCTTTATGATATGTTTC+AGG - Chr7:78482263-78482282 MsG0780040505.01.T01:intron 20.0%
!!! AAATCATTGACTGAAAATTT+GGG + Chr7:78481581-78481600 None:intergenic 20.0%
!!! AAATGGAAGTATTTATTAGT+AGG - Chr7:78482929-78482948 MsG0780040505.01.T01:intron 20.0%
!!! AGGTTTTGTTAAACTTTAAA+AGG + Chr7:78483721-78483740 None:intergenic 20.0%
!!! ATTGATTCTAATTTGAAACT+AGG - Chr7:78479812-78479831 MsG0780040505.01.T01:intron 20.0%
!!! ATTTTAATTTGAAATCCAAG+TGG - Chr7:78481143-78481162 MsG0780040505.01.T01:intron 20.0%
!!! CAAAATTGATTCTCTAATTA+GGG + Chr7:78480321-78480340 None:intergenic 20.0%
!!! TAACAAAACCTTTTTTATTG+TGG - Chr7:78483730-78483749 MsG0780040505.01.T01:intron 20.0%
!!! TATGGTTGTATGTTTTATAA+GGG - Chr7:78485023-78485042 MsG0780040505.01.T01:CDS 20.0%
!!! TCGTTTTCTTTTTTCATTTT+CGG - Chr7:78481000-78481019 MsG0780040505.01.T01:intron 20.0%
!!! TTATTGTTAAAGCATTGAAA+TGG - Chr7:78484486-78484505 MsG0780040505.01.T01:intron 20.0%
!!! TTTTAATTTGCTAAGAAGTT+TGG - Chr7:78483869-78483888 MsG0780040505.01.T01:intron 20.0%
!!! TTTTATTGAAATTGAAGTCA+TGG - Chr7:78479629-78479648 MsG0780040505.01.T01:three_prime_UTR 20.0%
! AAGCTGATTAAACATTATGA+TGG + Chr7:78485198-78485217 None:intergenic 25.0%
! ACCAGAATTAAACCTTATAT+TGG + Chr7:78482704-78482723 None:intergenic 25.0%
! AGTATATTATGTTAGTAGCA+AGG + Chr7:78481211-78481230 None:intergenic 25.0%
! ATGTTAAATGTTCAGTTCTA+CGG + Chr7:78480906-78480925 None:intergenic 25.0%
! ATTAGCAGTATAAACAGAAA+CGG + Chr7:78483947-78483966 None:intergenic 25.0%
! ATTCACACTCAAATAAAAGA+AGG + Chr7:78480979-78480998 None:intergenic 25.0%
! CAAATTCAATTCATTCAAAG+TGG + Chr7:78480151-78480170 None:intergenic 25.0%
! CAATACTTCTTATTATACTG+CGG + Chr7:78482109-78482128 None:intergenic 25.0%
! CACTTTGAATGAATTGAATT+TGG - Chr7:78480149-78480168 MsG0780040505.01.T01:CDS 25.0%
! GAATTTATTCTACTTGAAGT+TGG + Chr7:78480586-78480605 None:intergenic 25.0%
! GTATAACACGATTTACATTT+GGG + Chr7:78480405-78480424 None:intergenic 25.0%
! TAGCAAATTAAAAAAAAGGG+AGG + Chr7:78483862-78483881 None:intergenic 25.0%
! TATTCTTGCAATTTAGATTG+TGG - Chr7:78484985-78485004 MsG0780040505.01.T01:CDS 25.0%
! TCAAACTTCAAAAATGAAAG+TGG + Chr7:78479237-78479256 None:intergenic 25.0%
! TCAAGTAGAATAAATTCTAG+AGG - Chr7:78480589-78480608 MsG0780040505.01.T01:intron 25.0%
! TGCAAATAATTTAAACCAGA+AGG + Chr7:78482483-78482502 None:intergenic 25.0%
! TGTATAACACGATTTACATT+TGG + Chr7:78480406-78480425 None:intergenic 25.0%
! TTAATATTTGATGCATTTGC+AGG - Chr7:78484632-78484651 MsG0780040505.01.T01:intron 25.0%
! TTGAACATTAAGTGTATGTT+TGG + Chr7:78480278-78480297 None:intergenic 25.0%
! TTTAACAACAAGAACACATT+CGG + Chr7:78484909-78484928 None:intergenic 25.0%
! TTTGAAAAAGAGACCTAATT+GGG + Chr7:78481268-78481287 None:intergenic 25.0%
!! AAAGTAAGTTGAATGTTAAG+TGG - Chr7:78480485-78480504 MsG0780040505.01.T01:intron 25.0%
!! AATTGGTAACATAAACATGA+TGG + Chr7:78483644-78483663 None:intergenic 25.0%
!! ATTTGGATTTTGCAGTTTAT+GGG + Chr7:78482981-78483000 None:intergenic 25.0%
!! CAAATCATTGACTGAAAATT+TGG + Chr7:78481582-78481601 None:intergenic 25.0%
!! CAAATTTTCAGTCAATGATT+TGG - Chr7:78481580-78481599 MsG0780040505.01.T01:intron 25.0%
!! GCAAAATTGATTCTCTAATT+AGG + Chr7:78480322-78480341 None:intergenic 25.0%
!! GTATGGTTGTATGTTTTATA+AGG - Chr7:78485022-78485041 MsG0780040505.01.T01:CDS 25.0%
!! TCTTTACTCATGAAAGTTTT+TGG - Chr7:78481086-78481105 MsG0780040505.01.T01:intron 25.0%
!! TTATATTTTGCTTCTCAGTT+TGG - Chr7:78480938-78480957 MsG0780040505.01.T01:intron 25.0%
!! TTGCATTAACCTGTATTTTT+AGG - Chr7:78485077-78485096 MsG0780040505.01.T01:CDS 25.0%
!!! ATATTGTACAAGCTCTAAAA+AGG - Chr7:78484100-78484119 MsG0780040505.01.T01:intron 25.0%
!!! ATTTTTTCTTTTGGACAGTA+CGG - Chr7:78484075-78484094 MsG0780040505.01.T01:intron 25.0%
!!! CTTAGTTTACTTTTATGACT+AGG - Chr7:78483405-78483424 MsG0780040505.01.T01:CDS 25.0%
!!! CTTTTTTCATTTTCGGTTTT+AGG - Chr7:78481007-78481026 MsG0780040505.01.T01:intron 25.0%
!!! GAAATTGATTTTGTGATGTT+TGG + Chr7:78480640-78480659 None:intergenic 25.0%
!!! GTATTTTTTCTTTTTCGAGA+GGG - Chr7:78482441-78482460 MsG0780040505.01.T01:intron 25.0%
!!! TATTGTACAAGCTCTAAAAA+GGG - Chr7:78484101-78484120 MsG0780040505.01.T01:intron 25.0%
!!! TATTTTTTCTTTTTCGAGAG+GGG - Chr7:78482442-78482461 MsG0780040505.01.T01:intron 25.0%
!!! TGTATTTTTTCTTTTTCGAG+AGG - Chr7:78482440-78482459 MsG0780040505.01.T01:intron 25.0%
!!! TTTGGTATTACTTTTGAAAG+AGG + Chr7:78480344-78480363 None:intergenic 25.0%
!!! TTTTGAAAAAGAGACCTAAT+TGG + Chr7:78481269-78481288 None:intergenic 25.0%
!!! TTTTTCAAAAATCAAGCACT+TGG - Chr7:78483906-78483925 MsG0780040505.01.T01:intron 25.0%
AAAACATACAACCATACAAG+TGG + Chr7:78485019-78485038 None:intergenic 30.0%
AAAGAATGAATCATACTTGG+TGG + Chr7:78479582-78479601 None:intergenic 30.0%
AAGAAGTTTGGCTATTCAAA+GGG - Chr7:78483881-78483900 MsG0780040505.01.T01:intron 30.0%
AAGATTCTTGTGTATCAGTA+TGG + Chr7:78484673-78484692 None:intergenic 30.0%
AATATCGGACCTAAAAATAC+AGG + Chr7:78485089-78485108 None:intergenic 30.0%
AATTAAAAAAAAGGGAGGAC+CGG + Chr7:78483857-78483876 None:intergenic 30.0%
ACAGTAAAGTTGTTGTCATT+AGG - Chr7:78483765-78483784 MsG0780040505.01.T01:intron 30.0%
ACATCTTCTTTACTAATCTC+TGG + Chr7:78484314-78484333 None:intergenic 30.0%
ACGAAAGAATGAATCATACT+TGG + Chr7:78479585-78479604 None:intergenic 30.0%
ATACACAAGAATCTTGTGAA+AGG - Chr7:78484678-78484697 MsG0780040505.01.T01:intron 30.0%
ATCAACAACCAAATGTAATC+AGG + Chr7:78483996-78484015 None:intergenic 30.0%
ATCTCATTGTTCATCTATGA+AGG - Chr7:78483042-78483061 MsG0780040505.01.T01:intron 30.0%
ATGCATGAATAGGCTAAAAT+TGG + Chr7:78481606-78481625 None:intergenic 30.0%
ATTCTAACCTTGTCTCTATT+AGG + Chr7:78482167-78482186 None:intergenic 30.0%
ATTGAAAGTAGGAAAGAATG+AGG + Chr7:78484558-78484577 None:intergenic 30.0%
CAAAATAATCTGAACCAAAC+AGG + Chr7:78479784-78479803 None:intergenic 30.0%
CATAACAACCTGATTACATT+TGG - Chr7:78483985-78484004 MsG0780040505.01.T01:intron 30.0%
CTAAACGTGAAACTAATCAT+AGG - Chr7:78480686-78480705 MsG0780040505.01.T01:intron 30.0%
CTAGTTAATTGAGCGTTAAT+TGG + Chr7:78483661-78483680 None:intergenic 30.0%
GATACTTAAGAATCATCCTA+TGG + Chr7:78483165-78483184 None:intergenic 30.0%
GCCAATATAAGGTTTAATTC+TGG - Chr7:78482700-78482719 MsG0780040505.01.T01:intron 30.0%
TAAGAAGTTTGGCTATTCAA+AGG - Chr7:78483880-78483899 MsG0780040505.01.T01:intron 30.0%
TAATACCAAACACACACTTA+AGG - Chr7:78480354-78480373 MsG0780040505.01.T01:intron 30.0%
TACTTATAGAGACATTTCTG+AGG + Chr7:78484052-78484071 None:intergenic 30.0%
TACTTCCATGATTCATTAAG+TGG - Chr7:78481758-78481777 MsG0780040505.01.T01:CDS 30.0%
TCAATATTTAGCACTGTTAG+CGG - Chr7:78480746-78480765 MsG0780040505.01.T01:intron 30.0%
TCTCATTGTTCATCTATGAA+GGG - Chr7:78483043-78483062 MsG0780040505.01.T01:intron 30.0%
TGCTTAGTGAATATTCTCTT+TGG - Chr7:78482895-78482914 MsG0780040505.01.T01:intron 30.0%
TGTTATACATAGTGCATGTT+TGG - Chr7:78480417-78480436 MsG0780040505.01.T01:intron 30.0%
TGTTCAGGAATTTCGTAATT+GGG - Chr7:78479683-78479702 MsG0780040505.01.T01:CDS 30.0%
TTAACAACAAGAACACATTC+GGG + Chr7:78484908-78484927 None:intergenic 30.0%
TTAGTGAATATTCTCTTTGG+TGG - Chr7:78482898-78482917 MsG0780040505.01.T01:intron 30.0%
TTATAGCTTGATTGTATTCC+AGG - Chr7:78481822-78481841 MsG0780040505.01.T01:intron 30.0%
TTGATTGTATTCCAGGTAAA+AGG - Chr7:78481829-78481848 MsG0780040505.01.T01:intron 30.0%
TTGTTCAGGAATTTCGTAAT+TGG - Chr7:78479682-78479701 MsG0780040505.01.T01:CDS 30.0%
! AACAAAGTTGATTCCCAATT+AGG - Chr7:78481252-78481271 MsG0780040505.01.T01:CDS 30.0%
! AATTTAAAACCCTCTAGAAG+TGG + Chr7:78479880-78479899 None:intergenic 30.0%
! AATTTTGTGAAAGGGTTCTT+CGG - Chr7:78484849-78484868 MsG0780040505.01.T01:intron 30.0%
! ACCTCGAAATTTAGAATCAT+GGG + Chr7:78484803-78484822 None:intergenic 30.0%
! ACTTTAAAAACAAGCTCAAC+AGG + Chr7:78481543-78481562 None:intergenic 30.0%
! GATTTGGATTTTGCAGTTTA+TGG + Chr7:78482982-78483001 None:intergenic 30.0%
! GTTTATAGTGTTGAAGTGAT+CGG + Chr7:78479520-78479539 None:intergenic 30.0%
! TAATGTTCAACTCGATTTTG+TGG - Chr7:78480288-78480307 MsG0780040505.01.T01:CDS 30.0%
! TCTTGTGCATACTTTTGTTA+AGG - Chr7:78481667-78481686 MsG0780040505.01.T01:intron 30.0%
! TGGGAATCAACTTTGTTTAA+AGG + Chr7:78481249-78481268 None:intergenic 30.0%
! TTATTTTCCACTCTCTCTAT+GGG - Chr7:78483283-78483302 MsG0780040505.01.T01:intron 30.0%
! TTTGGATTTTGCAGTTTATG+GGG + Chr7:78482980-78482999 None:intergenic 30.0%
! TTTTCTATGATGTTACCTTC+TGG - Chr7:78482465-78482484 MsG0780040505.01.T01:intron 30.0%
!! ACAGGTTTTCCATTTAACTT+GGG + Chr7:78484756-78484775 None:intergenic 30.0%
!! AGTCATGGATTTTAATGTTG+TGG - Chr7:78479644-78479663 MsG0780040505.01.T01:three_prime_UTR 30.0%
!! ATTGTACAAGCTCTAAAAAG+GGG - Chr7:78484102-78484121 MsG0780040505.01.T01:intron 30.0%
!! ATTTGTAGCTTTGAGTCTAA+AGG + Chr7:78480562-78480581 None:intergenic 30.0%
!! GACAACCATATTTGATTTTG+AGG - Chr7:78482136-78482155 MsG0780040505.01.T01:CDS 30.0%
!! TAAGGTTCAACTTACTTTTG+CGG - Chr7:78480372-78480391 MsG0780040505.01.T01:intron 30.0%
!! TAGGAATGTTTTTGACTAGT+GGG - Chr7:78482948-78482967 MsG0780040505.01.T01:intron 30.0%
AAAAATCAAGCACTTGGAGT+TGG - Chr7:78483912-78483931 MsG0780040505.01.T01:intron 35.0%
AAACTAAGTTACTGCTCAGA+CGG + Chr7:78483393-78483412 None:intergenic 35.0%
AAATCTCCTGAGAAGTTGAA+AGG - Chr7:78481056-78481075 MsG0780040505.01.T01:intron 35.0%
AACAGCATGAAGCCAATATA+AGG - Chr7:78482689-78482708 MsG0780040505.01.T01:intron 35.0%
AACCAAACACACACTATGTT+TGG + Chr7:78480112-78480131 None:intergenic 35.0%
AACCAAACATAGTGTGTGTT+TGG - Chr7:78480107-78480126 MsG0780040505.01.T01:intron 35.0%
AATTAGGGTTCTTGCTGAAA+AGG - Chr7:78479749-78479768 MsG0780040505.01.T01:CDS 35.0%
ACAATCTACTTGAGGTATGT+TGG - Chr7:78483242-78483261 MsG0780040505.01.T01:intron 35.0%
ACAGCTAATACACATCGAAA+AGG + Chr7:78484365-78484384 None:intergenic 35.0%
ACAGTGGTACGAAACTAAAT+TGG + Chr7:78481296-78481315 None:intergenic 35.0%
ACCCATGATTCTAAATTTCG+AGG - Chr7:78484799-78484818 MsG0780040505.01.T01:intron 35.0%
ATCCTATGGCAAACAAAAAC+TGG + Chr7:78483151-78483170 None:intergenic 35.0%
ATTAAACGTGCATTTGTGGA+TGG - Chr7:78482793-78482812 MsG0780040505.01.T01:intron 35.0%
ATTCATGCATGTACTACTTG+TGG - Chr7:78481616-78481635 MsG0780040505.01.T01:intron 35.0%
ATTCCAGTGAAGCTTTCAAT+AGG - Chr7:78483187-78483206 MsG0780040505.01.T01:intron 35.0%
CAAATTTGCCTCTTCAAAAG+TGG - Chr7:78480250-78480269 MsG0780040505.01.T01:intron 35.0%
CAAGTAGTACATGCATGAAT+AGG + Chr7:78481616-78481635 None:intergenic 35.0%
CAATCTACTTGAGGTATGTT+GGG - Chr7:78483243-78483262 MsG0780040505.01.T01:intron 35.0%
CACAAAACAACACAAAGCTA+TGG + Chr7:78481731-78481750 None:intergenic 35.0%
CACATCCACTTAATGAATCA+TGG + Chr7:78481766-78481785 None:intergenic 35.0%
CAGAAGGACAGAGTTAAATA+TGG + Chr7:78483113-78483132 None:intergenic 35.0%
CATCCAATACAACAAACCTA+TGG + Chr7:78484875-78484894 None:intergenic 35.0%
CCTCATAATGAAACAACGAT+GGG + Chr7:78484182-78484201 None:intergenic 35.0%
CGAAACATACAATACACGTT+TGG + Chr7:78479855-78479874 None:intergenic 35.0%
CTAATACACATCGAAAAGGA+GGG + Chr7:78484361-78484380 None:intergenic 35.0%
CTTGAGAGGAGTTTATAAAG+AGG - Chr7:78480814-78480833 MsG0780040505.01.T01:intron 35.0%
CTTTCTTCGAAGATCAACAA+TGG - Chr7:78479262-78479281 MsG0780040505.01.T01:three_prime_UTR 35.0%
CTTTGCAATGCTAAGCAATA+TGG + Chr7:78481340-78481359 None:intergenic 35.0%
GAAAATGTTTACATACCGCA+AGG + Chr7:78481115-78481134 None:intergenic 35.0%
GAAATGGCTTGAAATTGACA+TGG - Chr7:78484502-78484521 MsG0780040505.01.T01:intron 35.0%
GAGTTGAATGTAAACTGAAC+TGG - Chr7:78480195-78480214 MsG0780040505.01.T01:intron 35.0%
GCAAATTAAACGTGCATTTG+TGG - Chr7:78482789-78482808 MsG0780040505.01.T01:intron 35.0%
GGAATTTCCTAATAGAGACA+AGG - Chr7:78482157-78482176 MsG0780040505.01.T01:intron 35.0%
GTCACTTACATGTACTATAC+TGG - Chr7:78482285-78482304 MsG0780040505.01.T01:CDS 35.0%
GTGTGAAATTTCACTTTCAG+AGG - Chr7:78481783-78481802 MsG0780040505.01.T01:CDS 35.0%
GTTATAGGCTTCAACGAAAT+TGG + Chr7:78479546-78479565 None:intergenic 35.0%
GTTTACATTTGTGACTTGAC+AGG - Chr7:78482627-78482646 MsG0780040505.01.T01:intron 35.0%
TAACAACAAGAACACATTCG+GGG + Chr7:78484907-78484926 None:intergenic 35.0%
TCCTCATAATGAAACAACGA+TGG + Chr7:78484183-78484202 None:intergenic 35.0%
TGGACATTATCAGTAATGAG+AGG + Chr7:78483624-78483643 None:intergenic 35.0%
TGTATATCTTGTCCTAGAGA+AGG - Chr7:78484272-78484291 MsG0780040505.01.T01:intron 35.0%
TTAAAAACAAGCTCAACAGG+TGG + Chr7:78481540-78481559 None:intergenic 35.0%
TTAAACGTGCATTTGTGGAT+GGG - Chr7:78482794-78482813 MsG0780040505.01.T01:intron 35.0%
TTCTTATTATACTGCGGCAA+AGG + Chr7:78482103-78482122 None:intergenic 35.0%
TTGAACCTTAAGTGTGTGTT+TGG + Chr7:78480362-78480381 None:intergenic 35.0%
TTGAATGTAAACTGAACTGG+AGG - Chr7:78480198-78480217 MsG0780040505.01.T01:intron 35.0%
TTTACTAGGGTAGGAAGATT+TGG + Chr7:78482998-78483017 None:intergenic 35.0%
TTTGCAGGTAGAGTGTATAA+TGG - Chr7:78484647-78484666 MsG0780040505.01.T01:intron 35.0%
! AATGGATTCTACTTGAAGCT+AGG - Chr7:78479938-78479957 MsG0780040505.01.T01:CDS 35.0%
! AATTTTCAGTGCGTTTGTTC+AGG - Chr7:78479668-78479687 MsG0780040505.01.T01:exon 35.0%
! AGCAGGGTAATTTTGTGAAA+GGG - Chr7:78484841-78484860 MsG0780040505.01.T01:intron 35.0%
! AGCAGTCTAATTGATTCTAG+AGG + Chr7:78480666-78480685 None:intergenic 35.0%
! AGCTGCAAAACATTTGTTGA+TGG + Chr7:78482068-78482087 None:intergenic 35.0%
! ATTTTAAACAAAAGGGGCGA+AGG + Chr7:78483551-78483570 None:intergenic 35.0%
! CACCTCGAAATTTAGAATCA+TGG + Chr7:78484804-78484823 None:intergenic 35.0%
! CATGAAGTGAGCTTTCTTTT+AGG - Chr7:78482749-78482768 MsG0780040505.01.T01:intron 35.0%
! GACAGGTTTTCCATTTAACT+TGG + Chr7:78484757-78484776 None:intergenic 35.0%
! TAGCAGGGTAATTTTGTGAA+AGG - Chr7:78484840-78484859 MsG0780040505.01.T01:intron 35.0%
! TATTTTCCACTCTCTCTATG+GGG - Chr7:78483284-78483303 MsG0780040505.01.T01:intron 35.0%
! TCAACAAATGTTTTGCAGCT+TGG - Chr7:78482068-78482087 MsG0780040505.01.T01:intron 35.0%
! TCTCATTTGTTGACATATGC+TGG - Chr7:78481961-78481980 MsG0780040505.01.T01:intron 35.0%
! TGGTTTAGTTTCCACTTGTA+TGG - Chr7:78485005-78485024 MsG0780040505.01.T01:CDS 35.0%
! TTTTAAACAAAAGGGGCGAA+GGG + Chr7:78483550-78483569 None:intergenic 35.0%
! TTTTCCAAGTGCCAATTTGT+AGG - Chr7:78483493-78483512 MsG0780040505.01.T01:intron 35.0%
! TTTTCCCATAAGTGTCTGAT+GGG - Chr7:78483519-78483538 MsG0780040505.01.T01:intron 35.0%
! TTTTGTAGGTTCTTGAGATC+AGG - Chr7:78484249-78484268 MsG0780040505.01.T01:intron 35.0%
!! AACCAGTTTTTGTTTGCCAT+AGG - Chr7:78483146-78483165 MsG0780040505.01.T01:intron 35.0%
!! AACTACTTTTGCCATATCTC+AGG + Chr7:78481491-78481510 None:intergenic 35.0%
!! CAAATGCACGTTTAATTTGC+AGG + Chr7:78482789-78482808 None:intergenic 35.0%
!! CTTTGCTTTTGTCTCTAGAA+TGG - Chr7:78479920-78479939 MsG0780040505.01.T01:CDS 35.0%
!! GTAGGAATGTTTTTGACTAG+TGG - Chr7:78482947-78482966 MsG0780040505.01.T01:intron 35.0%
!! GTTATTTTCCACTCTCTCTA+TGG - Chr7:78483282-78483301 MsG0780040505.01.T01:intron 35.0%
!! TACCACTGTTGATTGGTTTA+GGG - Chr7:78481307-78481326 MsG0780040505.01.T01:intron 35.0%
!! TTATATTGGCTTCATGCTGT+TGG + Chr7:78482690-78482709 None:intergenic 35.0%
!! TTCCATTTAACTTGGGGAAA+GGG + Chr7:78484749-78484768 None:intergenic 35.0%
!! TTTCCATTTAACTTGGGGAA+AGG + Chr7:78484750-78484769 None:intergenic 35.0%
!!! ATAGTGTGTGTTTGGTTTTG+TGG - Chr7:78480115-78480134 MsG0780040505.01.T01:intron 35.0%
!!! CAGGTTTTCCATTTAACTTG+GGG + Chr7:78484755-78484774 None:intergenic 35.0%
!!! GCTTGTTTTTAAAGTTGAGC+TGG - Chr7:78481548-78481567 MsG0780040505.01.T01:intron 35.0%
!!! GGTTTTTTCGAAAGCGTTAT+AGG + Chr7:78479561-78479580 None:intergenic 35.0%
!!! GTAAACCTTTTAGAGCTTGT+AGG - Chr7:78483348-78483367 MsG0780040505.01.T01:CDS 35.0%
AAAATTACCCTGCTATTGCC+AGG + Chr7:78484835-78484854 None:intergenic 40.0%
AACAACAAGAACACATTCGG+GGG + Chr7:78484906-78484925 None:intergenic 40.0%
AACAATGGCGTATTTGAGCA+TGG - Chr7:78479277-78479296 MsG0780040505.01.T01:three_prime_UTR 40.0%
AATTGACATGGATGTGGATG+AGG - Chr7:78484514-78484533 MsG0780040505.01.T01:intron 40.0%
ACAATGGCGTATTTGAGCAT+GGG - Chr7:78479278-78479297 MsG0780040505.01.T01:three_prime_UTR 40.0%
ACGTCGTTGCTTACGAAATT+AGG - Chr7:78479733-78479752 MsG0780040505.01.T01:CDS 40.0%
ACTACTGAGAACCTAACATG+TGG - Chr7:78485127-78485146 MsG0780040505.01.T01:CDS 40.0%
AGAATCCTATCTATCCGATG+TGG + Chr7:78480796-78480815 None:intergenic 40.0%
AGACGGAAACATAACTGAGT+TGG + Chr7:78483376-78483395 None:intergenic 40.0%
AGTTTCGTACCACTGTTGAT+TGG - Chr7:78481300-78481319 MsG0780040505.01.T01:intron 40.0%
ATCTGAACTTGTAGCATCTC+AGG - Chr7:78481989-78482008 MsG0780040505.01.T01:intron 40.0%
ATCTTCCTACCCTAGTAAAG+AGG - Chr7:78482999-78483018 MsG0780040505.01.T01:intron 40.0%
ATGCCTATTGAAAGCTTCAC+TGG + Chr7:78483193-78483212 None:intergenic 40.0%
ATGTTTCGTTCCACTTCTAG+AGG - Chr7:78479867-78479886 MsG0780040505.01.T01:intron 40.0%
CATTAGAAACCAATGGCATC+AGG + Chr7:78481371-78481390 None:intergenic 40.0%
CGTACAATACACCAAATGGT+TGG - Chr7:78483791-78483810 MsG0780040505.01.T01:intron 40.0%
CGTCGTTGCTTACGAAATTA+GGG - Chr7:78479734-78479753 MsG0780040505.01.T01:CDS 40.0%
CTAACTCATCCTTACAAGAC+AGG + Chr7:78480861-78480880 None:intergenic 40.0%
CTGTCTTGTAAGGATGAGTT+AGG - Chr7:78480859-78480878 MsG0780040505.01.T01:intron 40.0%
CTTGAAGTTCTACCTTCTCT+AGG + Chr7:78484287-78484306 None:intergenic 40.0%
GAAAGTAGGAAAGAATGAGG+AGG + Chr7:78484555-78484574 None:intergenic 40.0%
GAATCCTATCTATCCGATGT+GGG + Chr7:78480795-78480814 None:intergenic 40.0%
GAGAGGAGTTTATAAAGAGG+AGG - Chr7:78480817-78480836 MsG0780040505.01.T01:intron 40.0%
GCTAATACACATCGAAAAGG+AGG + Chr7:78484362-78484381 None:intergenic 40.0%
GCTTGAAATTGACATGGATG+TGG - Chr7:78484508-78484527 MsG0780040505.01.T01:intron 40.0%
GGAAAACCTGTCAATTCATG+AGG - Chr7:78484765-78484784 MsG0780040505.01.T01:intron 40.0%
GGATAGATAGGATTCTTGAG+AGG - Chr7:78480800-78480819 MsG0780040505.01.T01:intron 40.0%
GGTGCTTGTAATGAATATCG+AGG + Chr7:78480885-78480904 None:intergenic 40.0%
GTATCCCATCAGACACTTAT+GGG + Chr7:78483526-78483545 None:intergenic 40.0%
GTTACAGATCGTCATACAGA+AGG + Chr7:78483129-78483148 None:intergenic 40.0%
TAAACGTGCATTTGTGGATG+GGG - Chr7:78482795-78482814 MsG0780040505.01.T01:intron 40.0%
TCACTAGTGAACCACATGTT+AGG + Chr7:78485141-78485160 None:intergenic 40.0%
TCAGAACTCAGAACACAATC+AGG + Chr7:78482381-78482400 None:intergenic 40.0%
TGTATCCCATCAGACACTTA+TGG + Chr7:78483527-78483546 None:intergenic 40.0%
TGTTCCGTTTGCTTTCCTAT+CGG - Chr7:78481914-78481933 MsG0780040505.01.T01:intron 40.0%
TGTTGAAGTGATCGGAAAAG+AGG + Chr7:78479512-78479531 None:intergenic 40.0%
TGTTTCGTTCCACTTCTAGA+GGG - Chr7:78479868-78479887 MsG0780040505.01.T01:intron 40.0%
TTTACCAGTCCTCGTGATAT+TGG + Chr7:78484155-78484174 None:intergenic 40.0%
! AAAGGTATGTTGTGCCTGTT+TGG - Chr7:78479767-78479786 MsG0780040505.01.T01:CDS 40.0%
! AGAGGTGCATTAGAAACCAA+TGG + Chr7:78481378-78481397 None:intergenic 40.0%
! ATTTTCCACTCTCTCTATGG+GGG - Chr7:78483285-78483304 MsG0780040505.01.T01:intron 40.0%
! CCAAGGCACCACAATAAAAA+AGG + Chr7:78483741-78483760 None:intergenic 40.0%
! CCCATCGTTGTTTCATTATG+AGG - Chr7:78484179-78484198 MsG0780040505.01.T01:intron 40.0%
! CTTTGGTGGCTAAGCAAAAA+TGG - Chr7:78482912-78482931 MsG0780040505.01.T01:intron 40.0%
! GATTTTGCAGTTTATGGGGT+TGG + Chr7:78482976-78482995 None:intergenic 40.0%
! GGAGAAGTACAATCTACTTG+AGG - Chr7:78483234-78483253 MsG0780040505.01.T01:intron 40.0%
! GTTTTCCCATAAGTGTCTGA+TGG - Chr7:78483518-78483537 MsG0780040505.01.T01:intron 40.0%
!! ACACACTATGTTTGGTTCTG+CGG + Chr7:78480104-78480123 None:intergenic 40.0%
!! ATACAGCCACTTTGCTTTTG+TGG + Chr7:78484713-78484732 None:intergenic 40.0%
!! ATTTGAGAGAGATGCCGTTT+TGG + Chr7:78479361-78479380 None:intergenic 40.0%
!! GTACCACTGTTGATTGGTTT+AGG - Chr7:78481306-78481325 MsG0780040505.01.T01:intron 40.0%
!! GTTTGGTTCCACTTTTGAAG+AGG + Chr7:78480261-78480280 None:intergenic 40.0%
!! GTTTTAGGCTGACAGACAAT+TGG - Chr7:78481022-78481041 MsG0780040505.01.T01:intron 40.0%
!! TACAGCCACTTTGCTTTTGT+GGG + Chr7:78484712-78484731 None:intergenic 40.0%
!! TGTTTTATAAGGGCTAGCAG+TGG - Chr7:78485033-78485052 MsG0780040505.01.T01:CDS 40.0%
!!! ATGCTCTCTAGAGCAACTTT+TGG + Chr7:78484214-78484233 None:intergenic 40.0%
!!! CCTTTTTTATTGTGGTGCCT+TGG - Chr7:78483738-78483757 MsG0780040505.01.T01:intron 40.0%
!!! GAAAGTTTTTGGCATCCTTG+CGG - Chr7:78481097-78481116 MsG0780040505.01.T01:intron 40.0%
!!! GATGCCGTTTTGGTATGAAA+CGG + Chr7:78479351-78479370 None:intergenic 40.0%
AAGAAAGCCTGGCAATAGCA+GGG - Chr7:78484825-78484844 MsG0780040505.01.T01:intron 45.0%
AATCAAGCACTTGGAGTTGG+AGG - Chr7:78483915-78483934 MsG0780040505.01.T01:intron 45.0%
ACAACTTTACTGTTGCGCCA+AGG + Chr7:78483758-78483777 None:intergenic 45.0%
ACCTGTCAATTCATGAGGAC+TGG - Chr7:78484770-78484789 MsG0780040505.01.T01:intron 45.0%
ACTAAATCCCAACCGAGTGT+TGG + Chr7:78480772-78480791 None:intergenic 45.0%
ACTTTCTGTATGCTTCCTGC+TGG - Chr7:78482402-78482421 MsG0780040505.01.T01:CDS 45.0%
ATACACATCGAAAAGGAGGG+AGG + Chr7:78484358-78484377 None:intergenic 45.0%
ATCAAGCACTTGGAGTTGGA+GGG - Chr7:78483916-78483935 MsG0780040505.01.T01:intron 45.0%
CAATAACCTCCAACTTCACC+TGG + Chr7:78484472-78484491 None:intergenic 45.0%
CCTTACAAGACAGGCTTGTA+CGG + Chr7:78480852-78480871 None:intergenic 45.0%
CTACCCTAGTAAAGAGGAGT+GGG - Chr7:78483005-78483024 MsG0780040505.01.T01:intron 45.0%
CTTTGCCCACAAAAGCAAAG+TGG - Chr7:78484704-78484723 MsG0780040505.01.T01:CDS 45.0%
GACAGACAATTGGCTGCAAA+TGG - Chr7:78481032-78481051 MsG0780040505.01.T01:intron 45.0%
GACCCTAAACCAATCAACAG+TGG + Chr7:78481312-78481331 None:intergenic 45.0%
GACCCTTTCCCCAAGTTAAA+TGG - Chr7:78484744-78484763 MsG0780040505.01.T01:CDS 45.0%
GACGCCGTTTCATACCAAAA+CGG - Chr7:78479344-78479363 MsG0780040505.01.T01:three_prime_UTR 45.0%
GCCATATCTCAGGTTCATCT+GGG + Chr7:78481481-78481500 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - Chr7:78483787-78483806 MsG0780040505.01.T01:intron 45.0%
GTATGTTGGGTGCTTATGGA+TGG - Chr7:78483256-78483275 MsG0780040505.01.T01:intron 45.0%
GTGAATAAGCCTGATGCCAT+TGG - Chr7:78481359-78481378 MsG0780040505.01.T01:intron 45.0%
GTTCCCACTCCTCTTTACTA+GGG + Chr7:78483011-78483030 None:intergenic 45.0%
GTTCCGTTTGCTTTCCTATC+GGG - Chr7:78481915-78481934 MsG0780040505.01.T01:intron 45.0%
GTTGCAATGCTTCAAGGCAT+AGG + Chr7:78482668-78482687 None:intergenic 45.0%
GTTGGGATTTAGTCCCACAT+CGG - Chr7:78480779-78480798 MsG0780040505.01.T01:intron 45.0%
TACACATCGAAAAGGAGGGA+GGG + Chr7:78484357-78484376 None:intergenic 45.0%
TAGAAAACTACGAAGCCAGC+AGG + Chr7:78482420-78482439 None:intergenic 45.0%
TAGGCATATTGCCCAATCAC+AGG - Chr7:78483206-78483225 MsG0780040505.01.T01:intron 45.0%
TAGTCCCACATCGGATAGAT+AGG - Chr7:78480788-78480807 MsG0780040505.01.T01:intron 45.0%
TCCAAGTGCCAATTTGTAGG+CGG - Chr7:78483496-78483515 MsG0780040505.01.T01:intron 45.0%
TCCAGTCCTCATGAATTGAC+AGG + Chr7:78484774-78484793 None:intergenic 45.0%
TCCCAGATGAACCTGAGATA+TGG - Chr7:78481477-78481496 MsG0780040505.01.T01:intron 45.0%
TGAGGTATGTTGGGTGCTTA+TGG - Chr7:78483252-78483271 MsG0780040505.01.T01:intron 45.0%
TGCCATATCTCAGGTTCATC+TGG + Chr7:78481482-78481501 None:intergenic 45.0%
TGGGAAAACCGCCTACAAAT+TGG + Chr7:78483507-78483526 None:intergenic 45.0%
TGTTCCCACTCCTCTTTACT+AGG + Chr7:78483012-78483031 None:intergenic 45.0%
TTCCGTTTGCTTTCCTATCG+GGG - Chr7:78481916-78481935 MsG0780040505.01.T01:intron 45.0%
! CTGTTGGTTGCAATGCTTCA+AGG + Chr7:78482674-78482693 None:intergenic 45.0%
! GGAGAAACGGTTGAGGTATT+CGG + Chr7:78479324-78479343 None:intergenic 45.0%
! TTTTCCACTCTCTCTATGGG+GGG - Chr7:78483286-78483305 MsG0780040505.01.T01:intron 45.0%
!! AGACATTTCTGAGGCACACA+TGG + Chr7:78484043-78484062 None:intergenic 45.0%
!! CGGCCATAGGTTTGTTGTAT+TGG - Chr7:78484869-78484888 MsG0780040505.01.T01:intron 45.0%
!! GTAAAAGGTGCTAAGCGTGT+TGG - Chr7:78481844-78481863 MsG0780040505.01.T01:intron 45.0%
!! GTTTTGGTATGAAACGGCGT+CGG + Chr7:78479345-78479364 None:intergenic 45.0%
!! TGGCACCTACAAGCTCTAAA+AGG + Chr7:78483356-78483375 None:intergenic 45.0%
!! AAATAAATGTATAAATAAAA+AGG - Chr7:78483461-78483480 MsG0780040505.01.T01:intron 5.0%
!! AATAAATGTATAAATAAAAA+GGG - Chr7:78483462-78483481 MsG0780040505.01.T01:intron 5.0%
ACAAAAGCTCCCGCATACAC+AGG + Chr7:78483831-78483850 None:intergenic 50.0%
ACCCCCGATAGGAAAGCAAA+CGG + Chr7:78481921-78481940 None:intergenic 50.0%
ACCGCCTACAAATTGGCACT+TGG + Chr7:78483500-78483519 None:intergenic 50.0%
ACGCACAGAGTCACATAGCA+CGG - Chr7:78481410-78481429 MsG0780040505.01.T01:intron 50.0%
AGAGAGAAGGAAGTGGGAGT+TGG + Chr7:78479402-78479421 None:intergenic 50.0%
AGTGCAGACCGAAGAAGTTG+AGG + Chr7:78484132-78484151 None:intergenic 50.0%
ATCCAAGTGGTTTCGCTCGA+AGG - Chr7:78481156-78481175 MsG0780040505.01.T01:intron 50.0%
ATTCCCGAACCCTGTGTATG+CGG - Chr7:78483818-78483837 MsG0780040505.01.T01:intron 50.0%
CAAAAGCTCCCGCATACACA+GGG + Chr7:78483830-78483849 None:intergenic 50.0%
CAAGAAAGCCTGGCAATAGC+AGG - Chr7:78484824-78484843 MsG0780040505.01.T01:intron 50.0%
CACTCCAATATCACGAGGAC+TGG - Chr7:78484148-78484167 MsG0780040505.01.T01:intron 50.0%
CATACACAGGGTTCGGGAAT+GGG + Chr7:78483818-78483837 None:intergenic 50.0%
CCACTCCTCTTTACTAGGGT+AGG + Chr7:78483007-78483026 None:intergenic 50.0%
CCAGCACCTTTCAACTTCTC+AGG + Chr7:78481065-78481084 None:intergenic 50.0%
CCGTACAAGCCTGTCTTGTA+AGG - Chr7:78480849-78480868 MsG0780040505.01.T01:intron 50.0%
CCTACCCTAGTAAAGAGGAG+TGG - Chr7:78483004-78483023 MsG0780040505.01.T01:intron 50.0%
GAGTGCTATAAACCCCCGAT+AGG + Chr7:78481932-78481951 None:intergenic 50.0%
GTCGATTGAAGTCGTTGACG+AGG + Chr7:78479442-78479461 None:intergenic 50.0%
GTCTGCACTCCAATATCACG+AGG - Chr7:78484143-78484162 MsG0780040505.01.T01:intron 50.0%
TCCGTTTGCTTTCCTATCGG+GGG - Chr7:78481917-78481936 MsG0780040505.01.T01:intron 50.0%
TCGCTCGAAGGAGTTTGAGA+AGG - Chr7:78481168-78481187 MsG0780040505.01.T01:intron 50.0%
TCGTAATTGGGAATCCGCGT+GGG - Chr7:78479695-78479714 MsG0780040505.01.T01:CDS 50.0%
TGAAAGGGTTCTTCGGCCAT+AGG - Chr7:78484856-78484875 MsG0780040505.01.T01:intron 50.0%
TTCGTAATTGGGAATCCGCG+TGG - Chr7:78479694-78479713 MsG0780040505.01.T01:CDS 50.0%
TTTCCACTCTCTCTATGGGG+GGG - Chr7:78483287-78483306 MsG0780040505.01.T01:intron 50.0%
TTTCGAGGTGCAAGAAAGCC+TGG - Chr7:78484814-78484833 MsG0780040505.01.T01:intron 50.0%
! ATAAGGGCTAGCAGTGGAAG+TGG - Chr7:78485039-78485058 MsG0780040505.01.T01:CDS 50.0%
! ATGAAACGGCGTCGGAGAAA+CGG + Chr7:78479337-78479356 None:intergenic 50.0%
! CACGCTTAGCACCTTTTACC+TGG + Chr7:78481843-78481862 None:intergenic 50.0%
! CCTGAGAAGTTGAAAGGTGC+TGG - Chr7:78481062-78481081 MsG0780040505.01.T01:intron 50.0%
AGCTCACCAGGTGAAGTTGG+AGG - Chr7:78484463-78484482 MsG0780040505.01.T01:intron 55.0%
ATCGAAAAGGAGGGAGGGCA+AGG + Chr7:78484352-78484371 None:intergenic 55.0%
CAAGACAGGCTTGTACGGTG+AGG + Chr7:78480847-78480866 None:intergenic 55.0%
CACTGTTAGCGGCCAACACT+CGG - Chr7:78480757-78480776 MsG0780040505.01.T01:intron 55.0%
CAGAGCTCACCAGGTGAAGT+TGG - Chr7:78484460-78484479 MsG0780040505.01.T01:intron 55.0%
CGGGAATGGGTCCAACCATT+TGG + Chr7:78483805-78483824 None:intergenic 55.0%
CTCCTTCGAGCGAAACCACT+TGG + Chr7:78481161-78481180 None:intergenic 55.0%
GCATACACAGGGTTCGGGAA+TGG + Chr7:78483819-78483838 None:intergenic 55.0%
GGCGAGAGAGAGAAGGAAGT+GGG + Chr7:78479408-78479427 None:intergenic 55.0%
GGGGCGATCCTCAACTTCTT+CGG - Chr7:78484121-78484140 MsG0780040505.01.T01:intron 55.0%
GTGACTCTGTGCGTGTCTGT+GGG + Chr7:78481404-78481423 None:intergenic 55.0%
TACAGCTTCAAGAGCCCACG+CGG + Chr7:78479712-78479731 None:intergenic 55.0%
TCACCTGGTGAGCTCTGCTT+GGG + Chr7:78484457-78484476 None:intergenic 55.0%
TGACTCTGTGCGTGTCTGTG+GGG + Chr7:78481403-78481422 None:intergenic 55.0%
TGTGACTCTGTGCGTGTCTG+TGG + Chr7:78481405-78481424 None:intergenic 55.0%
TTAGCGGCCAACACTCGGTT+GGG - Chr7:78480762-78480781 MsG0780040505.01.T01:intron 55.0%
TTCACCTGGTGAGCTCTGCT+TGG + Chr7:78484458-78484477 None:intergenic 55.0%
TTCCCGAACCCTGTGTATGC+GGG - Chr7:78483819-78483838 MsG0780040505.01.T01:intron 55.0%
! ATGCGGGAGCTTTTGTGCAC+CGG - Chr7:78483835-78483854 MsG0780040505.01.T01:intron 55.0%
! GTTGACGAGGATGAGAGCGT+CGG + Chr7:78479429-78479448 None:intergenic 55.0%
ACTCTGTGCGTGTCTGTGGG+GGG + Chr7:78481401-78481420 None:intergenic 60.0%
AGACCCAAGCAGAGCTCACC+AGG - Chr7:78484451-78484470 MsG0780040505.01.T01:intron 60.0%
CGGCGAGAGAGAGAAGGAAG+TGG + Chr7:78479409-78479428 None:intergenic 60.0%
CTCCCGCATACACAGGGTTC+GGG + Chr7:78483824-78483843 None:intergenic 60.0%
GACTCTGTGCGTGTCTGTGG+GGG + Chr7:78481402-78481421 None:intergenic 60.0%
GCTCCCGCATACACAGGGTT+CGG + Chr7:78483825-78483844 None:intergenic 60.0%
GTACCCCCCCATAGAGAGAG+TGG + Chr7:78483293-78483312 None:intergenic 60.0%
GTTAGCGGCCAACACTCGGT+TGG - Chr7:78480761-78480780 MsG0780040505.01.T01:intron 60.0%
! CGGCGTCGGAGAAACGGTTG+AGG + Chr7:78479331-78479350 None:intergenic 65.0%
!! GAGCGTCGGCGAGAGAGAGA+AGG + Chr7:78479415-78479434 None:intergenic 65.0%
GTGCGTGTCTGTGGGGGGAG+AGG + Chr7:78481396-78481415 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 78479230 78485225 78479230 ID=MsG0780040505.01;Name=MsG0780040505.01
Chr7 mRNA 78479230 78485225 78479230 ID=MsG0780040505.01.T01;Parent=MsG0780040505.01;Name=MsG0780040505.01.T01;_AED=0.35;_eAED=0.38;_QI=51|0.90|0.91|1|1|1|12|440|439
Chr7 exon 78479230 78479801 78479230 ID=MsG0780040505.01.T01:exon:325;Parent=MsG0780040505.01.T01
Chr7 exon 78479920 78480025 78479920 ID=MsG0780040505.01.T01:exon:324;Parent=MsG0780040505.01.T01
Chr7 exon 78480124 78480198 78480124 ID=MsG0780040505.01.T01:exon:323;Parent=MsG0780040505.01.T01
Chr7 exon 78480286 78480362 78480286 ID=MsG0780040505.01.T01:exon:322;Parent=MsG0780040505.01.T01
Chr7 exon 78481200 78481287 78481200 ID=MsG0780040505.01.T01:exon:321;Parent=MsG0780040505.01.T01
Chr7 exon 78481745 78481806 78481745 ID=MsG0780040505.01.T01:exon:320;Parent=MsG0780040505.01.T01
Chr7 exon 78482114 78482170 78482114 ID=MsG0780040505.01.T01:exon:319;Parent=MsG0780040505.01.T01
Chr7 exon 78482277 78482444 78482277 ID=MsG0780040505.01.T01:exon:318;Parent=MsG0780040505.01.T01
Chr7 exon 78482546 78482611 78482546 ID=MsG0780040505.01.T01:exon:317;Parent=MsG0780040505.01.T01
Chr7 exon 78483337 78483426 78483337 ID=MsG0780040505.01.T01:exon:316;Parent=MsG0780040505.01.T01
Chr7 exon 78484685 78484778 78484685 ID=MsG0780040505.01.T01:exon:315;Parent=MsG0780040505.01.T01
Chr7 exon 78484870 78485225 78484870 ID=MsG0780040505.01.T01:exon:314;Parent=MsG0780040505.01.T01
Chr7 five_prime_UTR 78485175 78485225 78485175 ID=MsG0780040505.01.T01:five_prime_utr;Parent=MsG0780040505.01.T01
Chr7 CDS 78484870 78485174 78484870 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78484685 78484778 78484685 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78483337 78483426 78483337 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78482546 78482611 78482546 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78482277 78482444 78482277 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78482114 78482170 78482114 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78481745 78481806 78481745 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78481200 78481287 78481200 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78480286 78480362 78480286 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78480124 78480198 78480124 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78479920 78480025 78479920 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 CDS 78479670 78479801 78479670 ID=MsG0780040505.01.T01:cds;Parent=MsG0780040505.01.T01
Chr7 three_prime_UTR 78479230 78479669 78479230 ID=MsG0780040505.01.T01:three_prime_utr;Parent=MsG0780040505.01.T01
Gene Sequence

>MsG0780040505.01.T01

ATGGCGTATTTGAGCATGGGTGAAGCTCATAGAAGAATCACCGAATACCTCAACCGTTTCTCCGACGCCGTTTCATACCAAAACGGCATCTCTCTCAAATCTCTCTTCTCTCTCTCTTCCAACTCCCACTTCCTTCTCTCTCTCGCCGACGCTCTCATCCTCGTCAACGACTTCAATCGACTCATCAATCAAAACGATAACTACTCTCACTTCTCAGATATCATCTCTCCTCTTTTCCGATCACTTCAACACTATAAACAATCCAATTTCGTTGAAGCCTATAACGCTTTCGAAAAAACCACCAATGCGTTTGTTCAGGAATTTCGTAATTGGGAATCCGCGTGGGCTCTTGAAGCTGTATACGTCGTTGCTTACGAAATTAGGGTTCTTGCTGAAAAGGCTGACAGACAATTGGCTGCAAATGGAAAATCTCCTGAGAAGTTGAAAGGTGCTGGTTCTTTACTCATGAAAGTTTTTGGCATCCTTGCGGTAAAAGGTGCTAAGCGTGTTGGAGCATTGTATGTAACTTGTCAGTTATTCAAGATTTACTTTAAGGTTGATCAAATATACATCTTAATTTTTGCTGAAGATAGAATTTTGACTTTTATTCCATCAACAAATGTTTTGCAGCTTGGTACAGTTAACCTTTGCCGCAGTATAATAAGAAGTATTGAAACTGCGACAACCATATTTGATTTTGAGGAATTTCCTAATAGAGACAAGGTCACTTACATGTACTATACTGGTCGTCTCGAAGTTTTCAATGAAAATTTTCCTTCTGCTGACTATAAATTATCCTATGCCTTGAAGCATTGCAACCAACAGCATGAAGCCAATATAAGGATGATTCTTAAGTATCTGATTCCAGTGAAGCTTTCAATAGGCATATTGCCCAATCACAGGCTCTTGGAGAAGTACAATCTACTTGAGTACGGTAATATTGTACAAGCTCTAAAAAGGGGCGATCCTCAACTTCTTCGGTCTGCACTCCAATATCACGAGGACTGGTTCTTGAGATCAGGTGTATATCTTGTCCTAGAGAAGGTAGAACTTCAAGTATACCAGAGATTAGTAAAGAAGATTTACATCATTCAAAAGCAGAGAGACCCAAGCAGAGCTCACCAGGTGAAGTTGGAGGTTATTGTTAAAGCATTGAAATGGCTTGAAATTGACATGGATGTGGATGAGGTAGAGTGTATAATGGCCATACTGATACACAAGAATCTTGTGAAAGGTTACTTTGCCCACAAAAGCAAAGTGGCTGTATTGAGCAAGCAAGACCCTTTCCCCAAGTTAAATGGAAAACCTGTCAATTCATGA

Protein sequence

>MsG0780040505.01.T01

MAYLSMGEAHRRITEYLNRFSDAVSYQNGISLKSLFSLSSNSHFLLSLADALILVNDFNRLINQNDNYSHFSDIISPLFRSLQHYKQSNFVEAYNAFEKTTNAFVQEFRNWESAWALEAVYVVAYEIRVLAEKADRQLAANGKSPEKLKGAGSLLMKVFGILAVKGAKRVGALYVTCQLFKIYFKVDQIYILIFAEDRILTFIPSTNVLQLGTVNLCRSIIRSIETATTIFDFEEFPNRDKVTYMYYTGRLEVFNENFPSADYKLSYALKHCNQQHEANIRMILKYLIPVKLSIGILPNHRLLEKYNLLEYGNIVQALKRGDPQLLRSALQYHEDWFLRSGVYLVLEKVELQVYQRLVKKIYIIQKQRDPSRAHQVKLEVIVKALKWLEIDMDVDEVECIMAILIHKNLVKGYFAHKSKVAVLSKQDPFPKLNGKPVNS*