AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023088.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023088.01.T01 MTR_8g086270 98.842 259 3 0 1 259 1 259 0.0 525
MsG0480023088.01.T01 MTR_2g091225 83.594 256 42 0 1 256 1 256 5.36e-167 462
MsG0480023088.01.T01 MTR_2g015980 82.308 260 42 3 1 259 1 257 3.90e-157 437
MsG0480023088.01.T01 MTR_2g076960 80.315 254 49 1 2 255 3 255 1.05e-153 429
MsG0480023088.01.T01 MTR_2g091225 82.328 232 41 0 25 256 2 233 4.16e-149 416
MsG0480023088.01.T01 MTR_4g083060 79.518 249 51 0 1 249 1 249 1.05e-147 414
MsG0480023088.01.T01 MTR_5g044160 77.551 245 55 0 1 245 1 245 3.81e-143 402
MsG0480023088.01.T01 MTR_5g064580 72.016 243 66 1 7 247 8 250 1.53e-127 362
MsG0480023088.01.T01 MTR_3g099380 71.774 248 68 2 2 247 3 250 7.72e-127 360
MsG0480023088.01.T01 MTR_3g100620 65.560 241 80 1 7 244 11 251 4.47e-115 330
MsG0480023088.01.T01 MTR_3g099380 69.154 201 60 2 2 200 3 203 1.84e-96 281
MsG0480023088.01.T01 MTR_0137s0020 51.417 247 114 3 1 244 5 248 1.44e-76 233
MsG0480023088.01.T01 MTR_3g014060 51.012 247 115 3 1 244 5 248 1.67e-75 230
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023088.01.T01 AT2G42590 78.544 261 54 1 1 259 1 261 8.60e-154 429
MsG0480023088.01.T01 AT2G42590 78.244 262 54 2 1 259 1 262 7.38e-152 424
MsG0480023088.01.T01 AT2G42590 78.244 262 54 2 1 259 1 262 9.34e-152 424
MsG0480023088.01.T01 AT1G26480 77.869 244 54 0 2 245 5 248 9.05e-146 409
MsG0480023088.01.T01 AT1G22300 78.512 242 52 0 6 247 4 245 7.36e-138 388
MsG0480023088.01.T01 AT1G22300 78.512 242 52 0 6 247 4 245 9.37e-138 388
MsG0480023088.01.T01 AT1G34760 75.732 239 58 0 6 244 4 242 1.13e-136 385
MsG0480023088.01.T01 AT1G34760 75.732 239 58 0 6 244 4 242 1.63e-136 385
MsG0480023088.01.T01 AT1G22300 78.903 237 50 0 6 242 4 240 1.75e-135 382
MsG0480023088.01.T01 AT1G35160 70.968 248 70 1 2 247 6 253 8.61e-128 363
MsG0480023088.01.T01 AT1G78300 72.016 243 66 2 7 247 5 247 2.61e-127 362
MsG0480023088.01.T01 AT1G35160 72.803 239 63 2 2 238 6 244 3.88e-126 360
MsG0480023088.01.T01 AT5G38480 74.167 240 60 2 7 244 4 243 6.25e-126 358
MsG0480023088.01.T01 AT5G38480 74.167 240 60 2 7 244 4 243 6.25e-126 358
MsG0480023088.01.T01 AT4G09000 72.152 237 64 2 7 241 10 246 7.58e-126 358
MsG0480023088.01.T01 AT5G38480 71.542 253 69 3 7 257 4 255 2.00e-125 357
MsG0480023088.01.T01 AT3G02520 72.727 242 62 3 7 244 5 246 8.63e-124 353
MsG0480023088.01.T01 AT3G02520 72.727 242 62 3 7 244 5 246 8.63e-124 353
MsG0480023088.01.T01 AT4G09000 71.130 239 67 2 2 238 5 243 1.67e-123 354
MsG0480023088.01.T01 AT5G65430 68.826 247 74 1 1 244 1 247 5.78e-123 350
MsG0480023088.01.T01 AT5G10450 68.016 247 76 1 1 244 1 247 2.65e-122 348
MsG0480023088.01.T01 AT5G65430 68.852 244 73 1 1 241 1 244 1.33e-121 347
MsG0480023088.01.T01 AT5G10450 68.033 244 75 1 1 241 1 244 6.81e-121 345
MsG0480023088.01.T01 AT5G65430 69.295 241 71 1 1 238 1 241 1.92e-120 344
MsG0480023088.01.T01 AT5G10450 68.465 241 73 1 1 238 1 241 4.95e-120 343
MsG0480023088.01.T01 AT5G10450 68.465 241 73 1 1 238 1 241 1.52e-119 342
MsG0480023088.01.T01 AT5G16050 66.667 249 81 1 1 247 1 249 1.44e-116 335
MsG0480023088.01.T01 AT5G16050 66.667 249 81 1 1 247 1 249 1.44e-116 335
MsG0480023088.01.T01 AT1G78220 53.448 232 107 1 6 236 4 235 9.78e-85 253
MsG0480023088.01.T01 AT1G22290 50.000 214 83 5 6 214 4 198 8.60e-58 184
MsG0480023088.01.T01 AT1G22290 49.763 211 82 5 6 211 4 195 2.28e-57 182
MsG0480023088.01.T01 AT2G10450 61.702 47 17 1 204 249 16 62 3.67e-11 58.5

Find 83 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGATTATGCAGCTTCTA+AGG 0.184591 4:+80687025 MsG0480023088.01.T01:CDS
TTGACGTACATATCTGAAAA+AGG 0.188396 4:+80689122 MsG0480023088.01.T01:three_prime_UTR
AGGGGATTATTATCGGTATT+TGG 0.213214 4:+80685595 MsG0480023088.01.T01:CDS
CAATAATATGCATACCTTTC+AGG 0.215945 4:-80686851 None:intergenic
TTGAATTTCGAAAATTTCTA+AGG 0.246374 4:-80684875 None:intergenic
TAATGATTACCTCCATCTTC+AGG 0.273259 4:-80687078 None:intergenic
AGATCAAGATTATATTTATA+AGG 0.279327 4:-80689166 None:intergenic
CATGATATCACTGCATATAT+TGG 0.293412 4:-80685501 None:intergenic
AGAACGTAGTGGGTGCTCAT+AGG 0.371672 4:+80685369 MsG0480023088.01.T01:CDS
TCTAAGGTTTGAACTTTGAA+TGG 0.372286 4:-80684859 None:intergenic
TGGGTGCTCATAGGGCTTCA+TGG 0.373885 4:+80685378 MsG0480023088.01.T01:CDS
GCATCCCATTCGATTGGGTT+TGG 0.375573 4:+80686787 MsG0480023088.01.T01:CDS
GAACAAAAGGTGGAATCTTC+AGG 0.377055 4:+80688791 MsG0480023088.01.T01:CDS
TCATTCCATGGAAGCATATC+AGG 0.381388 4:+80685658 MsG0480023088.01.T01:CDS
AAATGAAAGGGGATTATTAT+CGG 0.396472 4:+80685588 MsG0480023088.01.T01:CDS
CCCACGCATCCCATTCGATT+GGG 0.399932 4:+80686782 MsG0480023088.01.T01:CDS
TCTTGTAGCCAACTGATAGA+AGG 0.402262 4:-80685349 None:intergenic
TTCAGCTTGTTCAGCGAGCT+TGG 0.412085 4:-80684963 None:intergenic
TCTATCCTCAATTGAGCATA+AGG 0.430983 4:+80685406 MsG0480023088.01.T01:CDS
GGCATGTCACCTTGCTAAGC+AGG 0.441855 4:+80686942 MsG0480023088.01.T01:CDS
TTCTTCCTTATGCTCAATTG+AGG 0.450139 4:-80685411 None:intergenic
CTAAGGTTTGAACTTTGAAT+GGG 0.452240 4:-80684858 None:intergenic
TCTAACAGATGAGGAACAAA+AGG 0.452327 4:+80688778 MsG0480023088.01.T01:intron
CCCTTCTGCTGCAGTGGAAG+CGG 0.455549 4:-80686750 None:intergenic
AATGATTACCTCCATCTTCA+GGG 0.461652 4:-80687077 None:intergenic
GAACGTAGTGGGTGCTCATA+GGG 0.465330 4:+80685370 MsG0480023088.01.T01:CDS
CTTATTCCATCGTCCTCTGC+TGG 0.475641 4:+80685542 MsG0480023088.01.T01:CDS
TCCCACGCATCCCATTCGAT+TGG 0.478060 4:+80686781 MsG0480023088.01.T01:CDS
AGCATAAGGAAGAATCTAAA+GGG 0.479531 4:+80685420 MsG0480023088.01.T01:CDS
CGCTTCCACTGCAGCAGAAG+GGG 0.482864 4:+80686751 MsG0480023088.01.T01:CDS
TGATGAAGCAATCTCTGAGT+TGG 0.491752 4:+80686969 MsG0480023088.01.T01:CDS
GAGCATAAGGAAGAATCTAA+AGG 0.492100 4:+80685419 MsG0480023088.01.T01:CDS
GTGGAATCTTCAGGAGCTGT+TGG 0.492385 4:+80688800 MsG0480023088.01.T01:CDS
ACCGCTTCCACTGCAGCAGA+AGG 0.492609 4:+80686749 MsG0480023088.01.T01:CDS
ACGTTCCTTGGTGGAAGCCA+TGG 0.499863 4:-80684921 None:intergenic
AGATATAAGCTAGGAATTTG+TGG 0.500000 4:+80688990 MsG0480023088.01.T01:three_prime_UTR
TATTTGGCGGAATTTAAGAA+TGG 0.505553 4:+80685611 MsG0480023088.01.T01:CDS
GAAAGTTAGCAGAATTTCCA+TGG 0.510429 4:+80684904 MsG0480023088.01.T01:exon
TGTGAATGTGAAGAGGATAA+AGG 0.513152 4:+80685448 MsG0480023088.01.T01:CDS
ACTTCTGACATCCCTGAAGA+TGG 0.519635 4:+80687066 MsG0480023088.01.T01:CDS
TATGATGTTGTGATAAGAGC+AGG 0.522423 4:+80689037 MsG0480023088.01.T01:three_prime_UTR
CCCAATCGAATGGGATGCGT+GGG 0.527885 4:-80686782 None:intergenic
TAACTCCCCTTCTGCTGCAG+TGG 0.529859 4:-80686756 None:intergenic
GAGAGAAACCTTCTATCAGT+TGG 0.536428 4:+80685341 MsG0480023088.01.T01:CDS
AAAGCCAAACCCAATCGAAT+GGG 0.542021 4:-80686791 None:intergenic
CAAAGCCAAACCCAATCGAA+TGG 0.549011 4:-80686792 None:intergenic
ACCCAATCGAATGGGATGCG+TGG 0.554168 4:-80686783 None:intergenic
ATTGATTATGCAGCTTCTAA+GGG 0.556365 4:+80687026 MsG0480023088.01.T01:CDS
CATCAAATGCCTGCTTAGCA+AGG 0.556866 4:-80686951 None:intergenic
AAGAGAAGCAGATATAAGCT+AGG 0.558918 4:+80688981 MsG0480023088.01.T01:three_prime_UTR
GAATCTTCAGGAGCTGTTGG+AGG 0.564663 4:+80688803 MsG0480023088.01.T01:CDS
CCGCTTCCACTGCAGCAGAA+GGG 0.566148 4:+80686750 MsG0480023088.01.T01:CDS
GAACAAGCTGAACGCTATGA+AGG 0.567764 4:+80684974 MsG0480023088.01.T01:CDS
AGGTTTGAACTTTGAATGGG+AGG 0.574980 4:-80684855 None:intergenic
AACAGATGAGGAACAAAAGG+TGG 0.576323 4:+80688781 MsG0480023088.01.T01:intron
GCAGACCTGATATGCTTCCA+TGG 0.581005 4:-80685663 None:intergenic
GGTTTGAACTTTGAATGGGA+GGG 0.587989 4:-80684854 None:intergenic
GGATTATTATCGGTATTTGG+CGG 0.591213 4:+80685598 MsG0480023088.01.T01:CDS
AATCGAATGGGATGCGTGGG+AGG 0.592219 4:-80686779 None:intergenic
ACGACGGAACATGTTGTTCG+TGG 0.592615 4:-80684807 None:intergenic
AGAGGCTGCTGATCATTCCA+TGG 0.596075 4:+80685646 MsG0480023088.01.T01:CDS
GACACTAGATTCACCAGCAG+AGG 0.596973 4:-80685555 None:intergenic
AAGTTCGTTGCATGAAGTCG+AGG 0.603468 4:+80689060 MsG0480023088.01.T01:three_prime_UTR
GAATGGTGATGAGCGAAAAG+AGG 0.603840 4:+80685628 MsG0480023088.01.T01:CDS
TGCATGAAGTCGAGGTTGCA+TGG 0.606506 4:+80689068 MsG0480023088.01.T01:three_prime_UTR
TCCACTCTCCGTATAGCGCG+TGG 0.606776 4:+80684776 None:intergenic
GTTGGCTACAAGAACGTAGT+GGG 0.620992 4:+80685359 MsG0480023088.01.T01:CDS
TGTCAGAAGTCCACAATGTG+AGG 0.623979 4:-80687053 None:intergenic
GATTCACCAGCAGAGGACGA+TGG 0.625143 4:-80685548 None:intergenic
AATTTCCATGGCTTCCACCA+AGG 0.626045 4:+80684916 MsG0480023088.01.T01:exon
TGTTGGAGGTGAAAATGCAT+AGG 0.631634 4:+80688817 MsG0480023088.01.T01:CDS
TAAGGGACAACCTCACATTG+TGG 0.657719 4:+80687043 MsG0480023088.01.T01:CDS
ACAAGACAAGCTACGCACGA+CGG 0.660960 4:-80684823 None:intergenic
TCTGACATCCCTGAAGATGG+AGG 0.665639 4:+80687069 MsG0480023088.01.T01:CDS
AGTTGGCTACAAGAACGTAG+TGG 0.666503 4:+80685358 MsG0480023088.01.T01:CDS
TGAGTTGGATACTCTGAGTG+AGG 0.668276 4:+80686984 MsG0480023088.01.T01:CDS
CCACTCTCCGTATAGCGCGT+GGG 0.669746 4:+80684777 None:intergenic
AAAGGAGTATAGACACAAGG+TGG 0.675844 4:+80685466 MsG0480023088.01.T01:CDS
GCTAGATGTTGAGTTGACAG+TGG 0.686884 4:+80685316 MsG0480023088.01.T01:CDS
GGAATGATGTGAATGTGAAG+AGG 0.689723 4:+80685441 MsG0480023088.01.T01:CDS
GTGCTCATAGGGCTTCATGG+AGG 0.700802 4:+80685381 MsG0480023088.01.T01:CDS
GATAAAGGAGTATAGACACA+AGG 0.704247 4:+80685463 MsG0480023088.01.T01:CDS
GGTGGAAGCAATGAAGAATG+TGG 0.728314 4:+80685289 MsG0480023088.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAATAAAAATAAATGATT+CGG - Chr4:80687169-80687188 None:intergenic 10.0%
!! TTTCTTCAAAAATTAAAAAT+TGG + Chr4:80687834-80687853 MsG0480023088.01.T01:intron 10.0%
!!! ATTTTTATTTGATAGAATTA+AGG + Chr4:80687177-80687196 MsG0480023088.01.T01:intron 10.0%
!! AATCATCATAAAAAAAATCA+AGG - Chr4:80685133-80685152 None:intergenic 15.0%
!! ATCATCATAAAAAAAATCAA+GGG - Chr4:80685132-80685151 None:intergenic 15.0%
!! ATTGATAAAGAAATTGAAAT+TGG + Chr4:80685196-80685215 MsG0480023088.01.T01:intron 15.0%
!! TAACTTAGTTACATATTATA+TGG + Chr4:80688052-80688071 MsG0480023088.01.T01:intron 15.0%
!! TTGATAAAGAAATTGAAATT+GGG + Chr4:80685197-80685216 MsG0480023088.01.T01:intron 15.0%
!!! AAAAATTGATTTTGGATAAA+AGG - Chr4:80686333-80686352 None:intergenic 15.0%
!!! TAAAATCAATTTTATGTGTT+TGG - Chr4:80686190-80686209 None:intergenic 15.0%
!!! TCTTTTTCTATAAAATGAAA+GGG + Chr4:80685576-80685595 MsG0480023088.01.T01:CDS 15.0%
!!! TTTTTTAAATATTATGGAAG+AGG + Chr4:80688542-80688561 MsG0480023088.01.T01:intron 15.0%
!! AAAAATGGAAGTAAAGAAAA+TGG - Chr4:80685015-80685034 None:intergenic 20.0%
!! AAAATGGAAGTAAAGAAAAT+GGG - Chr4:80685014-80685033 None:intergenic 20.0%
!! AAAATTGTAGAGAATTTAGA+TGG - Chr4:80687788-80687807 None:intergenic 20.0%
!! AAACCATTAGATTTAATACA+CGG - Chr4:80688312-80688331 None:intergenic 20.0%
!! AAATTATAAAGAAAATAGCC+AGG - Chr4:80688728-80688747 None:intergenic 20.0%
!! ACTCTTAAATCTGTATATAT+AGG - Chr4:80685073-80685092 None:intergenic 20.0%
!! AGTTAAAAGCTACAAATAAT+AGG - Chr4:80686273-80686292 None:intergenic 20.0%
!! ATAGAATTAAGGATGAAAAT+AGG + Chr4:80687188-80687207 MsG0480023088.01.T01:intron 20.0%
!! TACCAAAAAAAAAAACTGTT+CGG - Chr4:80686128-80686147 None:intergenic 20.0%
!! TAGTTATGGGATAAATATAA+AGG - Chr4:80686575-80686594 None:intergenic 20.0%
!! TATCTGTATTTACTTTAAGT+AGG - Chr4:80687364-80687383 None:intergenic 20.0%
!! TCATCATAAAAAAAATCAAG+GGG - Chr4:80685131-80685150 None:intergenic 20.0%
!! TGTACATAATTTCAATTCAA+TGG + Chr4:80688108-80688127 MsG0480023088.01.T01:intron 20.0%
!! TTAAATATGTGAAAAACTGA+TGG - Chr4:80687483-80687502 None:intergenic 20.0%
!! TTATGAATTATCAGATTAAC+AGG - Chr4:80686720-80686739 None:intergenic 20.0%
!! TTGAATTTCGAAAATTTCTA+AGG - Chr4:80684878-80684897 None:intergenic 20.0%
!!! AAACATAACTTTTGTTAAGT+CGG - Chr4:80688954-80688973 None:intergenic 20.0%
!!! AATCTAATGGTTTAATTTAG+TGG + Chr4:80688319-80688338 MsG0480023088.01.T01:intron 20.0%
!!! AATTTTTTTGAGATTGAAAG+AGG - Chr4:80687978-80687997 None:intergenic 20.0%
!!! AGAAACATTTTTTCTTTCTT+CGG + Chr4:80687868-80687887 MsG0480023088.01.T01:intron 20.0%
!!! ATTTTCATATCTGTTTCTTT+TGG + Chr4:80688880-80688899 MsG0480023088.01.T01:intron 20.0%
!!! CAAAAAAATTGTTGTTTGTT+TGG + Chr4:80687988-80688007 MsG0480023088.01.T01:intron 20.0%
!!! CTTTTTCTATAAAATGAAAG+GGG + Chr4:80685577-80685596 MsG0480023088.01.T01:CDS 20.0%
!!! GTCTTTTTCTATAAAATGAA+AGG + Chr4:80685575-80685594 MsG0480023088.01.T01:CDS 20.0%
!!! TAACATAACTTTTGTTAAGT+CGG - Chr4:80688925-80688944 None:intergenic 20.0%
!!! TAATTTCAATTCAATGGATT+TGG + Chr4:80688114-80688133 MsG0480023088.01.T01:intron 20.0%
!!! TCAGTTTTTCACATATTTAA+AGG + Chr4:80687483-80687502 MsG0480023088.01.T01:intron 20.0%
!!! TGAACTTTAAGAGAAAAAAA+TGG - Chr4:80685030-80685049 None:intergenic 20.0%
!!! TTCTCTACAATTTTTTATCT+AGG + Chr4:80687794-80687813 MsG0480023088.01.T01:intron 20.0%
!!! TTGAAATTTTCATTGTGTTT+TGG + Chr4:80685172-80685191 MsG0480023088.01.T01:intron 20.0%
! AAAATATGAGTAAAGTTGAC+AGG - Chr4:80688690-80688709 None:intergenic 25.0%
! AAATGAAAGGGGATTATTAT+CGG + Chr4:80685588-80685607 MsG0480023088.01.T01:CDS 25.0%
! AATAAGTACATAAGAAACTG+AGG - Chr4:80688490-80688509 None:intergenic 25.0%
! ATGATACATTCATGTAAAAG+TGG - Chr4:80686015-80686034 None:intergenic 25.0%
! TATATCTTTGCGGTTTAAAA+TGG + Chr4:80685703-80685722 MsG0480023088.01.T01:intron 25.0%
! TGAAAAGCTTGACAAATTTA+TGG - Chr4:80687438-80687457 None:intergenic 25.0%
! TTGAGTTAAAAAATCTCGTT+TGG - Chr4:80686296-80686315 None:intergenic 25.0%
!! AAAAAAAGTATGTTCTAGCT+TGG - Chr4:80687247-80687266 None:intergenic 25.0%
!! AATCTGATGGTGAAATTTAA+TGG - Chr4:80687650-80687669 None:intergenic 25.0%
!! ATAAAGTCAGATTTTCTAGA+AGG + Chr4:80687531-80687550 MsG0480023088.01.T01:intron 25.0%
!! ATGCAATTTGTTTATGTAAC+TGG + Chr4:80688417-80688436 MsG0480023088.01.T01:intron 25.0%
!! CAGAACTTTTTATATCTTTG+CGG + Chr4:80685693-80685712 MsG0480023088.01.T01:intron 25.0%
!! GTTGTATACTTTTACTGTTT+TGG + Chr4:80685255-80685274 MsG0480023088.01.T01:intron 25.0%
!! TTGATTTTGTCTTCAGAATT+TGG + Chr4:80685941-80685960 MsG0480023088.01.T01:intron 25.0%
!!! AAAAAAGTATGTTCTAGCTT+GGG - Chr4:80687246-80687265 None:intergenic 25.0%
!!! AACCGAACAGTTTTTTTTTT+TGG + Chr4:80686123-80686142 MsG0480023088.01.T01:intron 25.0%
!!! AGAATTGATTTTGAAATGCT+TGG + Chr4:80685902-80685921 MsG0480023088.01.T01:intron 25.0%
!!! ATGATTTGTAGTTCATTTTG+TGG + Chr4:80686447-80686466 MsG0480023088.01.T01:intron 25.0%
!!! ATTTGATTTTGAACACGTTA+AGG - Chr4:80688466-80688485 None:intergenic 25.0%
!!! GAAACATTTTTTCTTTCTTC+GGG + Chr4:80687869-80687888 MsG0480023088.01.T01:intron 25.0%
!!! GGAGATAAAATTGATTTTAG+AGG + Chr4:80685876-80685895 MsG0480023088.01.T01:intron 25.0%
!!! TTTTTTATCTAGGTTATGTG+TGG + Chr4:80687804-80687823 MsG0480023088.01.T01:intron 25.0%
AAAAAAACAAGACACTTGGT+TGG + Chr4:80688146-80688165 MsG0480023088.01.T01:intron 30.0%
AAACATATCACCAAAGTTTC+AGG - Chr4:80686898-80686917 None:intergenic 30.0%
AAACATCAAGCTTAGAACAT+TGG - Chr4:80685098-80685117 None:intergenic 30.0%
AAATTGCCCTACATAACATT+TGG + Chr4:80687670-80687689 MsG0480023088.01.T01:intron 30.0%
AACTAGATTTGATCAGAGTT+CGG - Chr4:80688856-80688875 None:intergenic 30.0%
AATATCTTATCAGAGATCGT+AGG - Chr4:80686598-80686617 None:intergenic 30.0%
AATATGTGAAAAACTGATGG+AGG - Chr4:80687480-80687499 None:intergenic 30.0%
AGAAAGAAAGTGAATCAAAG+AGG - Chr4:80687725-80687744 None:intergenic 30.0%
AGACCGTGTATTAAATCTAA+TGG + Chr4:80688306-80688325 MsG0480023088.01.T01:intron 30.0%
AGATATAAGCTAGGAATTTG+TGG + Chr4:80688990-80689009 MsG0480023088.01.T01:three_prime_UTR 30.0%
AGCATAAGGAAGAATCTAAA+GGG + Chr4:80685420-80685439 MsG0480023088.01.T01:CDS 30.0%
ATGACTACCAAATGTTATGT+AGG - Chr4:80687680-80687699 None:intergenic 30.0%
ATTATCAGATTAACAGGACT+TGG - Chr4:80686714-80686733 None:intergenic 30.0%
ATTGATTATGCAGCTTCTAA+GGG + Chr4:80687026-80687045 MsG0480023088.01.T01:CDS 30.0%
CAATAATATGCATACCTTTC+AGG - Chr4:80686854-80686873 None:intergenic 30.0%
CATGATATCACTGCATATAT+TGG - Chr4:80685504-80685523 None:intergenic 30.0%
CTAAGGTTTGAACTTTGAAT+GGG - Chr4:80684861-80684880 None:intergenic 30.0%
TAAACAGATCGCTTAATTGT+TGG - Chr4:80688640-80688659 None:intergenic 30.0%
TATTTGGCGGAATTTAAGAA+TGG + Chr4:80685611-80685630 MsG0480023088.01.T01:CDS 30.0%
TCACAAAAAAACAAGACACT+TGG + Chr4:80688142-80688161 MsG0480023088.01.T01:intron 30.0%
TGACGTACATATCTGAAAAA+GGG + Chr4:80689123-80689142 MsG0480023088.01.T01:three_prime_UTR 30.0%
TGACTACCAAATGTTATGTA+GGG - Chr4:80687679-80687698 None:intergenic 30.0%
TGCAACACTTATTTGAATGA+AGG + Chr4:80686632-80686651 MsG0480023088.01.T01:intron 30.0%
TGGATTGAACAATGAATTCA+AGG - Chr4:80685995-80686014 None:intergenic 30.0%
TGTATTTACTTTAAGTAGGC+CGG - Chr4:80687360-80687379 None:intergenic 30.0%
TGTTTCATGTAGAGAAGAAA+AGG + Chr4:80686510-80686529 MsG0480023088.01.T01:intron 30.0%
TTGACGTACATATCTGAAAA+AGG + Chr4:80689122-80689141 MsG0480023088.01.T01:three_prime_UTR 30.0%
TTTGTTTATGTAACTGGTAG+TGG + Chr4:80688423-80688442 MsG0480023088.01.T01:intron 30.0%
! AAATTTTGAACTCTCCTGAA+AGG + Chr4:80686837-80686856 MsG0480023088.01.T01:CDS 30.0%
! AATAGACACACTTGATTTTG+CGG - Chr4:80686360-80686379 None:intergenic 30.0%
! ATATCACTACCAGATTTTCT+AGG + Chr4:80687581-80687600 MsG0480023088.01.T01:intron 30.0%
! TCTAAGGTTTGAACTTTGAA+TGG - Chr4:80684862-80684881 None:intergenic 30.0%
!! AAAAAGTATGTTCTAGCTTG+GGG - Chr4:80687245-80687264 None:intergenic 30.0%
!! GTCTAGTCTTATAGCTAAAT+AGG - Chr4:80687303-80687322 None:intergenic 30.0%
!! TATGTGTTTGGAATCACTTT+TGG - Chr4:80686178-80686197 None:intergenic 30.0%
!! TGTATGTTTGGTTTCACTTT+TGG + Chr4:80685852-80685871 MsG0480023088.01.T01:intron 30.0%
!! TTCTTTTCTAGTATGTTAGC+TGG + Chr4:80687114-80687133 MsG0480023088.01.T01:intron 30.0%
!! TTTGCTGTTATTTCAAAACC+TGG + Chr4:80688707-80688726 MsG0480023088.01.T01:intron 30.0%
!!! ACTGTTTTGGTTGATAGAAA+TGG + Chr4:80685268-80685287 MsG0480023088.01.T01:intron 30.0%
AAAAAAACTGTTCGGTTCTG+AGG - Chr4:80686120-80686139 None:intergenic 35.0%
AAGAGAAGCAGATATAAGCT+AGG + Chr4:80688981-80689000 MsG0480023088.01.T01:three_prime_UTR 35.0%
AAGTGGGATGTAATAAAGGA+GGG + Chr4:80687906-80687925 MsG0480023088.01.T01:intron 35.0%
AATGATTACCTCCATCTTCA+GGG - Chr4:80687080-80687099 None:intergenic 35.0%
ACACACATGATAACCATCAT+AGG - Chr4:80685744-80685763 None:intergenic 35.0%
AGAGAAGTGGGATGTAATAA+AGG + Chr4:80687902-80687921 MsG0480023088.01.T01:intron 35.0%
AGGGGATTATTATCGGTATT+TGG + Chr4:80685595-80685614 MsG0480023088.01.T01:CDS 35.0%
AGTGTAGAACCAAACAGTTT+AGG + Chr4:80686147-80686166 MsG0480023088.01.T01:intron 35.0%
ATATCACCTATGACAAGTAC+CGG - Chr4:80686389-80686408 None:intergenic 35.0%
ATGACACTCCTCATATTTCA+GGG + Chr4:80686921-80686940 MsG0480023088.01.T01:intron 35.0%
ATGTCTATCTTAACTGAGGA+TGG + Chr4:80685786-80685805 MsG0480023088.01.T01:intron 35.0%
CTTCCTACAGCATAGAAAAT+CGG - Chr4:80688388-80688407 None:intergenic 35.0%
GAAAGTTAGCAGAATTTCCA+TGG + Chr4:80684904-80684923 MsG0480023088.01.T01:exon 35.0%
GAGCATAAGGAAGAATCTAA+AGG + Chr4:80685419-80685438 MsG0480023088.01.T01:CDS 35.0%
GGATTATTATCGGTATTTGG+CGG + Chr4:80685598-80685617 MsG0480023088.01.T01:CDS 35.0%
GGCTACCAAAAAATCCATTT+GGG + Chr4:80687327-80687346 MsG0480023088.01.T01:intron 35.0%
GGTGAAATTTAATGGTACAC+CGG - Chr4:80687642-80687661 None:intergenic 35.0%
GTAGAGAATTTAGATGGAGA+CGG - Chr4:80687782-80687801 None:intergenic 35.0%
TAATGATTACCTCCATCTTC+AGG - Chr4:80687081-80687100 None:intergenic 35.0%
TAGAATCCACCTAGAAAATC+TGG - Chr4:80687593-80687612 None:intergenic 35.0%
TAGCTATAAGACTAGACTTC+TGG + Chr4:80687306-80687325 MsG0480023088.01.T01:intron 35.0%
TATGATGTTGTGATAAGAGC+AGG + Chr4:80689037-80689056 MsG0480023088.01.T01:three_prime_UTR 35.0%
TCTATCCTCAATTGAGCATA+AGG + Chr4:80685406-80685425 MsG0480023088.01.T01:CDS 35.0%
TCTCTTATACACTGCTTCAA+TGG - Chr4:80688202-80688221 None:intergenic 35.0%
TGGCTACCAAAAAATCCATT+TGG + Chr4:80687326-80687345 MsG0480023088.01.T01:intron 35.0%
TGTAGGGCAATTTAATCTGA+TGG - Chr4:80687663-80687682 None:intergenic 35.0%
TGTGAATGTGAAGAGGATAA+AGG + Chr4:80685448-80685467 MsG0480023088.01.T01:CDS 35.0%
TTCTTCCTTATGCTCAATTG+AGG - Chr4:80685414-80685433 None:intergenic 35.0%
TTTCTTTCTACTCGCAACTT+CGG + Chr4:80687736-80687755 MsG0480023088.01.T01:intron 35.0%
TTTGAACTCTCCTGAAACTT+TGG + Chr4:80686885-80686904 MsG0480023088.01.T01:intron 35.0%
! AGTCACAAGTCTTGTATGTT+TGG + Chr4:80685840-80685859 MsG0480023088.01.T01:intron 35.0%
! ATAGAAAATCGGTGGATTCT+AGG - Chr4:80688377-80688396 None:intergenic 35.0%
! CATTGATTATGCAGCTTCTA+AGG + Chr4:80687025-80687044 MsG0480023088.01.T01:CDS 35.0%
! GACTCTATCTGAAATGTGAA+TGG + Chr4:80687136-80687155 MsG0480023088.01.T01:intron 35.0%
! GATAAAGGAGTATAGACACA+AGG + Chr4:80685463-80685482 MsG0480023088.01.T01:CDS 35.0%
! GGTTTAATTTAGTGGTACAC+CGG + Chr4:80688327-80688346 MsG0480023088.01.T01:intron 35.0%
! GTTCTAAGCTTGATGTTTCT+TGG + Chr4:80685100-80685119 MsG0480023088.01.T01:intron 35.0%
! TAGAAAATCGGTGGATTCTA+GGG - Chr4:80688376-80688395 None:intergenic 35.0%
! TTGATGTTTTCTGCCTATGA+TGG + Chr4:80685728-80685747 MsG0480023088.01.T01:intron 35.0%
! TTTGTTTGGTGAGAAACTCT+CGG + Chr4:80688002-80688021 MsG0480023088.01.T01:intron 35.0%
!! AAGAAAATGGGTTAGAGAGA+AGG - Chr4:80685002-80685021 None:intergenic 35.0%
!! AGATTTTCTAGGTGGATTCT+AGG + Chr4:80687592-80687611 MsG0480023088.01.T01:intron 35.0%
!! ATGTTTGGTTTCACTTTTGG+AGG + Chr4:80685855-80685874 MsG0480023088.01.T01:intron 35.0%
!! CAGTTCTGACATTTTCATCT+TGG + Chr4:80688661-80688680 MsG0480023088.01.T01:intron 35.0%
!! GATTTTCTAGGTGGATTCTA+GGG + Chr4:80687593-80687612 MsG0480023088.01.T01:intron 35.0%
!! GCGGTGACAAAAATTGATTT+TGG - Chr4:80686341-80686360 None:intergenic 35.0%
!!! GTTTTGGTTGATAGAAATGG+TGG + Chr4:80685271-80685290 MsG0480023088.01.T01:intron 35.0%
AAAATCCATGAACAAGCGAG+GGG + Chr4:80688590-80688609 MsG0480023088.01.T01:intron 40.0%
AAAGCCAAACCCAATCGAAT+GGG - Chr4:80686794-80686813 None:intergenic 40.0%
AAATAGGTCAAACCAACCGA+CGG + Chr4:80687204-80687223 MsG0480023088.01.T01:intron 40.0%
AATTTAATGGTACACCGGTG+AGG - Chr4:80687637-80687656 None:intergenic 40.0%
ACTTGTGACTAAAGAAGCGA+AGG - Chr4:80685830-80685849 None:intergenic 40.0%
AGGTTTGAACTTTGAATGGG+AGG - Chr4:80684858-80684877 None:intergenic 40.0%
AGTGGGATGTAATAAAGGAG+GGG + Chr4:80687907-80687926 MsG0480023088.01.T01:intron 40.0%
ATCAGATTAACAGGACTTGG+CGG - Chr4:80686711-80686730 None:intergenic 40.0%
ATGTAGAGAAGAAAAGGAGC+GGG + Chr4:80686516-80686535 MsG0480023088.01.T01:intron 40.0%
ATTTAATGGTACACCGGTGA+GGG - Chr4:80687636-80687655 None:intergenic 40.0%
CAAAATCCATGAACAAGCGA+GGG + Chr4:80688589-80688608 MsG0480023088.01.T01:intron 40.0%
CAGAGATCGTAGGTAGTTAT+GGG - Chr4:80686588-80686607 None:intergenic 40.0%
CATAGGTGATATGAGCTTTG+AGG + Chr4:80686397-80686416 MsG0480023088.01.T01:intron 40.0%
CATGACACTCCTCATATTTC+AGG + Chr4:80686920-80686939 MsG0480023088.01.T01:intron 40.0%
CATGTAGAGAAGAAAAGGAG+CGG + Chr4:80686515-80686534 MsG0480023088.01.T01:intron 40.0%
CTACAGCATGGTGATAATCA+AGG - Chr4:80688081-80688100 None:intergenic 40.0%
CTTGTGACTAAAGAAGCGAA+GGG - Chr4:80685829-80685848 None:intergenic 40.0%
GAAAGTGAATCAAAGAGGAG+TGG - Chr4:80687720-80687739 None:intergenic 40.0%
GAACAAAAGGTGGAATCTTC+AGG + Chr4:80688791-80688810 MsG0480023088.01.T01:CDS 40.0%
GAAGTGGGATGTAATAAAGG+AGG + Chr4:80687905-80687924 MsG0480023088.01.T01:intron 40.0%
GAGAGAAACCTTCTATCAGT+TGG + Chr4:80685341-80685360 MsG0480023088.01.T01:CDS 40.0%
GATGGTTATCATGTGTGTTG+TGG + Chr4:80685746-80685765 MsG0480023088.01.T01:intron 40.0%
GGAATGATGTGAATGTGAAG+AGG + Chr4:80685441-80685460 MsG0480023088.01.T01:CDS 40.0%
GGTTTGAACTTTGAATGGGA+GGG - Chr4:80684857-80684876 None:intergenic 40.0%
GTACACGTATAACTACAGCA+TGG - Chr4:80688093-80688112 None:intergenic 40.0%
GTTGTGGATATGTAGTTGCT+TGG + Chr4:80685762-80685781 MsG0480023088.01.T01:intron 40.0%
TCAAAATCCATGAACAAGCG+AGG + Chr4:80688588-80688607 MsG0480023088.01.T01:intron 40.0%
TCAGAGATCGTAGGTAGTTA+TGG - Chr4:80686589-80686608 None:intergenic 40.0%
TCTTGTAGCCAACTGATAGA+AGG - Chr4:80685352-80685371 None:intergenic 40.0%
TGATGAAGCAATCTCTGAGT+TGG + Chr4:80686969-80686988 MsG0480023088.01.T01:CDS 40.0%
TGGCATGTCTATCTTAACTG+AGG + Chr4:80685782-80685801 MsG0480023088.01.T01:intron 40.0%
TGTTGGAGGTGAAAATGCAT+AGG + Chr4:80688817-80688836 MsG0480023088.01.T01:CDS 40.0%
TTACACAGATGGGAGATTCA+GGG + Chr4:80688228-80688247 MsG0480023088.01.T01:intron 40.0%
! AAAGGAGTATAGACACAAGG+TGG + Chr4:80685466-80685485 MsG0480023088.01.T01:CDS 40.0%
! ACTTGTTAGGTAGGAGAAAG+TGG + Chr4:80686420-80686439 MsG0480023088.01.T01:intron 40.0%
! TCACTACCAGATTTTCTAGG+TGG + Chr4:80687584-80687603 MsG0480023088.01.T01:intron 40.0%
! TCATTCCATGGAAGCATATC+AGG + Chr4:80685658-80685677 MsG0480023088.01.T01:CDS 40.0%
! TTGGCTCTTCCTAAACTGTT+TGG - Chr4:80686159-80686178 None:intergenic 40.0%
!! AAGTGTGTCTATTTCTGAGC+CGG + Chr4:80686367-80686386 MsG0480023088.01.T01:intron 40.0%
!! ATGAGCTTTGAGGACTTGTT+AGG + Chr4:80686407-80686426 MsG0480023088.01.T01:intron 40.0%
!!! GGTACGTTTTAGAGAGAAGT+GGG + Chr4:80687890-80687909 MsG0480023088.01.T01:intron 40.0%
!!! TGAGGCCCAAATGGATTTTT+TGG - Chr4:80687335-80687354 None:intergenic 40.0%
AAAAGGAGCGGGAAGATAAG+AGG + Chr4:80686527-80686546 MsG0480023088.01.T01:intron 45.0%
AAAGGAGCGGGAAGATAAGA+GGG + Chr4:80686528-80686547 MsG0480023088.01.T01:intron 45.0%
AAGTTCGTTGCATGAAGTCG+AGG + Chr4:80689060-80689079 MsG0480023088.01.T01:three_prime_UTR 45.0%
AATAGGTCAAACCAACCGAC+GGG + Chr4:80687205-80687224 MsG0480023088.01.T01:intron 45.0%
AATTTAGTGGTACACCGGTG+AGG + Chr4:80688332-80688351 MsG0480023088.01.T01:intron 45.0%
AATTTCCATGGCTTCCACCA+AGG + Chr4:80684916-80684935 MsG0480023088.01.T01:exon 45.0%
ACTTCTGACATCCCTGAAGA+TGG + Chr4:80687066-80687085 MsG0480023088.01.T01:CDS 45.0%
AGAGAACGCAGTTACACAGA+TGG + Chr4:80688217-80688236 MsG0480023088.01.T01:intron 45.0%
AGTTGGCTACAAGAACGTAG+TGG + Chr4:80685358-80685377 MsG0480023088.01.T01:CDS 45.0%
ATTTAGTGGTACACCGGTGA+GGG + Chr4:80688333-80688352 MsG0480023088.01.T01:intron 45.0%
CAAAGAGGAGTGGTTTGATC+TGG - Chr4:80687710-80687729 None:intergenic 45.0%
CAAAGCCAAACCCAATCGAA+TGG - Chr4:80686795-80686814 None:intergenic 45.0%
CAGCATGGTGATAATCAAGG+TGG - Chr4:80688078-80688097 None:intergenic 45.0%
CATCAAATGCCTGCTTAGCA+AGG - Chr4:80686954-80686973 None:intergenic 45.0%
CCTACAGCATAGAAAATCGG+TGG - Chr4:80688385-80688404 None:intergenic 45.0%
CTCAACAGCCAACTTCACAT+TGG - Chr4:80686664-80686683 None:intergenic 45.0%
GAACAAGCTGAACGCTATGA+AGG + Chr4:80684974-80684993 MsG0480023088.01.T01:CDS 45.0%
GAGAACGCAGTTACACAGAT+GGG + Chr4:80688218-80688237 MsG0480023088.01.T01:intron 45.0%
GGAGGTGAAAATGCATAGGT+AGG + Chr4:80688821-80688840 MsG0480023088.01.T01:intron 45.0%
GGCATCAACCAATGTGAAGT+TGG + Chr4:80686653-80686672 MsG0480023088.01.T01:intron 45.0%
GGTGGAAGCAATGAAGAATG+TGG + Chr4:80685289-80685308 MsG0480023088.01.T01:CDS 45.0%
GGTTCAATTAAGTCCCTCAC+CGG + Chr4:80687620-80687639 MsG0480023088.01.T01:intron 45.0%
GTGACATGCCCTGAAATATG+AGG - Chr4:80686932-80686951 None:intergenic 45.0%
GTTACACAGATGGGAGATTC+AGG + Chr4:80688227-80688246 MsG0480023088.01.T01:intron 45.0%
GTTGGCTACAAGAACGTAGT+GGG + Chr4:80685359-80685378 MsG0480023088.01.T01:CDS 45.0%
TAAGGGACAACCTCACATTG+TGG + Chr4:80687043-80687062 MsG0480023088.01.T01:CDS 45.0%
TACACAGATGGGAGATTCAG+GGG + Chr4:80688229-80688248 MsG0480023088.01.T01:intron 45.0%
TGTCAGAAGTCCACAATGTG+AGG - Chr4:80687056-80687075 None:intergenic 45.0%
TGTGAAAAACTGATGGAGGC+TGG - Chr4:80687476-80687495 None:intergenic 45.0%
TTCAGGGGAAGATTTGTGTG+TGG + Chr4:80688244-80688263 MsG0480023088.01.T01:intron 45.0%
! GAAGTTTTCACGTTCCTTGG+TGG - Chr4:80684933-80684952 None:intergenic 45.0%
! GAATGGTGATGAGCGAAAAG+AGG + Chr4:80685628-80685647 MsG0480023088.01.T01:CDS 45.0%
! GACGAAGTTTTCACGTTCCT+TGG - Chr4:80684936-80684955 None:intergenic 45.0%
! TGAGTTGGATACTCTGAGTG+AGG + Chr4:80686984-80687003 MsG0480023088.01.T01:CDS 45.0%
!! AGTATGTTCTAGCTTGGGGT+AGG - Chr4:80687241-80687260 None:intergenic 45.0%
!! GCTAGATGTTGAGTTGACAG+TGG + Chr4:80685316-80685335 MsG0480023088.01.T01:CDS 45.0%
!! GCTTTGAGGACTTGTTAGGT+AGG + Chr4:80686411-80686430 MsG0480023088.01.T01:intron 45.0%
!! GTATGTTCTAGCTTGGGGTA+GGG - Chr4:80687240-80687259 None:intergenic 45.0%
!!! CCACCGATTTTCTATGCTGT+AGG + Chr4:80688382-80688401 MsG0480023088.01.T01:intron 45.0%
!!! GGGTACGTTTTAGAGAGAAG+TGG + Chr4:80687889-80687908 MsG0480023088.01.T01:intron 45.0%
!!! AAAACATTTTTTAAATATTA+TGG + Chr4:80688536-80688555 MsG0480023088.01.T01:intron 5.0%
AAGGAGCGGGAAGATAAGAG+GGG + Chr4:80686529-80686548 MsG0480023088.01.T01:intron 50.0%
AATCCATTTGGGCCTCAGAC+CGG + Chr4:80687338-80687357 MsG0480023088.01.T01:intron 50.0%
ACAAGACAAGCTACGCACGA+CGG - Chr4:80684826-80684845 None:intergenic 50.0%
ACGACGGAACATGTTGTTCG+TGG - Chr4:80684810-80684829 None:intergenic 50.0%
ACTTTAAGTAGGCCGGTCTG+AGG - Chr4:80687353-80687372 None:intergenic 50.0%
AGAGGCTGCTGATCATTCCA+TGG + Chr4:80685646-80685665 MsG0480023088.01.T01:CDS 50.0%
AGGAGTGGTTTGATCTGGTG+CGG - Chr4:80687705-80687724 None:intergenic 50.0%
CTTATTCCATCGTCCTCTGC+TGG + Chr4:80685542-80685561 MsG0480023088.01.T01:CDS 50.0%
GAATCTTCAGGAGCTGTTGG+AGG + Chr4:80688803-80688822 MsG0480023088.01.T01:CDS 50.0%
GACACTAGATTCACCAGCAG+AGG - Chr4:80685558-80685577 None:intergenic 50.0%
GCAGACCTGATATGCTTCCA+TGG - Chr4:80685666-80685685 None:intergenic 50.0%
GCATCCCATTCGATTGGGTT+TGG + Chr4:80686787-80686806 MsG0480023088.01.T01:CDS 50.0%
GGTTCAAACAAGTCCCTCAC+CGG - Chr4:80688349-80688368 None:intergenic 50.0%
GTGGAATCTTCAGGAGCTGT+TGG + Chr4:80688800-80688819 MsG0480023088.01.T01:CDS 50.0%
TCTGACATCCCTGAAGATGG+AGG + Chr4:80687069-80687088 MsG0480023088.01.T01:CDS 50.0%
TCTGAGCCGGTACTTGTCAT+AGG + Chr4:80686380-80686399 MsG0480023088.01.T01:intron 50.0%
TGCATGAAGTCGAGGTTGCA+TGG + Chr4:80689068-80689087 MsG0480023088.01.T01:three_prime_UTR 50.0%
! TGGAAGCATATCAGGTCTGC+TGG + Chr4:80685666-80685685 MsG0480023088.01.T01:intron 50.0%
! TTCAGCTTGTTCAGCGAGCT+TGG - Chr4:80684966-80684985 None:intergenic 50.0%
!! AATCGGTGGATTCTAGGGTG+AGG - Chr4:80688371-80688390 None:intergenic 50.0%
!! AGAACGTAGTGGGTGCTCAT+AGG + Chr4:80685369-80685388 MsG0480023088.01.T01:CDS 50.0%
!! ATCGGTGGATTCTAGGGTGA+GGG - Chr4:80688370-80688389 None:intergenic 50.0%
!! CTAGGTGGATTCTAGGGTGA+GGG + Chr4:80687599-80687618 MsG0480023088.01.T01:intron 50.0%
!! GAACGTAGTGGGTGCTCATA+GGG + Chr4:80685370-80685389 MsG0480023088.01.T01:CDS 50.0%
!! TCTAGGTGGATTCTAGGGTG+AGG + Chr4:80687598-80687617 MsG0480023088.01.T01:intron 50.0%
AATCGAATGGGATGCGTGGG+AGG - Chr4:80686782-80686801 None:intergenic 55.0%
ACCCAATCGAATGGGATGCG+TGG - Chr4:80686786-80686805 None:intergenic 55.0%
ACGTTCCTTGGTGGAAGCCA+TGG - Chr4:80684924-80684943 None:intergenic 55.0%
AGGAGCGGGAAGATAAGAGG+GGG + Chr4:80686530-80686549 MsG0480023088.01.T01:intron 55.0%
CCCAATCGAATGGGATGCGT+GGG - Chr4:80686785-80686804 None:intergenic 55.0%
CCCACGCATCCCATTCGATT+GGG + Chr4:80686782-80686801 MsG0480023088.01.T01:CDS 55.0%
CTCGCAACTTCGGCATCTTC+CGG + Chr4:80687746-80687765 MsG0480023088.01.T01:intron 55.0%
GAATGCCCCTCGCTTGTTCA+TGG - Chr4:80688598-80688617 None:intergenic 55.0%
GATTCACCAGCAGAGGACGA+TGG - Chr4:80685551-80685570 None:intergenic 55.0%
GGCATGTCACCTTGCTAAGC+AGG + Chr4:80686942-80686961 MsG0480023088.01.T01:CDS 55.0%
GTGCTCATAGGGCTTCATGG+AGG + Chr4:80685381-80685400 MsG0480023088.01.T01:CDS 55.0%
TAACTCCCCTTCTGCTGCAG+TGG - Chr4:80686759-80686778 None:intergenic 55.0%
TCCCACGCATCCCATTCGAT+TGG + Chr4:80686781-80686800 MsG0480023088.01.T01:CDS 55.0%
TGGAGACGGAGATTGTTCGC+CGG - Chr4:80687768-80687787 None:intergenic 55.0%
TGGGTGCTCATAGGGCTTCA+TGG + Chr4:80685378-80685397 MsG0480023088.01.T01:CDS 55.0%
AACCAACCGACGGGAGCCAA+TGG + Chr4:80687214-80687233 MsG0480023088.01.T01:intron 60.0%
ACCGCTTCCACTGCAGCAGA+AGG + Chr4:80686749-80686768 MsG0480023088.01.T01:CDS 60.0%
CCCTTCTGCTGCAGTGGAAG+CGG - Chr4:80686753-80686772 None:intergenic 60.0%
CCGCTTCCACTGCAGCAGAA+GGG + Chr4:80686750-80686769 MsG0480023088.01.T01:CDS 60.0%
CGCTTCCACTGCAGCAGAAG+GGG + Chr4:80686751-80686770 MsG0480023088.01.T01:CDS 60.0%
CTAGCTTGGGGTAGGGCCAT+TGG - Chr4:80687233-80687252 None:intergenic 60.0%
! AGGCCGGTCTGAGGCCCAAA+TGG - Chr4:80687344-80687363 None:intergenic 65.0%
!! GTAGGGCCATTGGCTCCCGT+CGG - Chr4:80687223-80687242 None:intergenic 65.0%
!! GGCCATTGGCTCCCGTCGGT+TGG - Chr4:80687219-80687238 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 80684788 80689187 80684788 ID=MsG0480023088.01;Name=MsG0480023088.01
Chr4 mRNA 80684788 80689187 80684788 ID=MsG0480023088.01.T01;Parent=MsG0480023088.01;Name=MsG0480023088.01.T01;_AED=0.50;_eAED=0.50;_QI=135|1|1|1|0.6|0.66|6|209|259
Chr4 exon 80684788 80684995 80684788 ID=MsG0480023088.01.T01:exon:23710;Parent=MsG0480023088.01.T01
Chr4 exon 80685285 80685679 80685285 ID=MsG0480023088.01.T01:exon:23711;Parent=MsG0480023088.01.T01
Chr4 exon 80686749 80686858 80686749 ID=MsG0480023088.01.T01:exon:23712;Parent=MsG0480023088.01.T01
Chr4 exon 80686942 80687090 80686942 ID=MsG0480023088.01.T01:exon:23713;Parent=MsG0480023088.01.T01
Chr4 exon 80688786 80688838 80688786 ID=MsG0480023088.01.T01:exon:23714;Parent=MsG0480023088.01.T01
Chr4 exon 80688979 80689187 80688979 ID=MsG0480023088.01.T01:exon:23715;Parent=MsG0480023088.01.T01
Chr4 five_prime_UTR 80684788 80684922 80684788 ID=MsG0480023088.01.T01:five_prime_utr;Parent=MsG0480023088.01.T01
Chr4 CDS 80684923 80684995 80684923 ID=MsG0480023088.01.T01:cds;Parent=MsG0480023088.01.T01
Chr4 CDS 80685285 80685679 80685285 ID=MsG0480023088.01.T01:cds;Parent=MsG0480023088.01.T01
Chr4 CDS 80686749 80686858 80686749 ID=MsG0480023088.01.T01:cds;Parent=MsG0480023088.01.T01
Chr4 CDS 80686942 80687090 80686942 ID=MsG0480023088.01.T01:cds;Parent=MsG0480023088.01.T01
Chr4 CDS 80688786 80688838 80688786 ID=MsG0480023088.01.T01:cds;Parent=MsG0480023088.01.T01
Chr4 three_prime_UTR 80688979 80689187 80688979 ID=MsG0480023088.01.T01:three_prime_utr;Parent=MsG0480023088.01.T01
Gene Sequence

>MsG0480023088.01.T01

ATGGCTTCCACCAAGGAACGTGAAAACTTCGTCTACATCGCCAAGCTCGCTGAACAAGCTGAACGCTATGAAGAAATGGTGGAAGCAATGAAGAATGTGGCGAAGCTAGATGTTGAGTTGACAGTGGAAGAGAGAAACCTTCTATCAGTTGGCTACAAGAACGTAGTGGGTGCTCATAGGGCTTCATGGAGGATTCTATCCTCAATTGAGCATAAGGAAGAATCTAAAGGGAATGATGTGAATGTGAAGAGGATAAAGGAGTATAGACACAAGGTGGAATCTGAATTATCCAATATATGCAGTGATATCATGTCTATTATTGATGATCATCTTATTCCATCGTCCTCTGCTGGTGAATCTAGTGTCTTTTTCTATAAAATGAAAGGGGATTATTATCGGTATTTGGCGGAATTTAAGAATGGTGATGAGCGAAAAGAGGCTGCTGATCATTCCATGGAAGCATATCAGACCGCTTCCACTGCAGCAGAAGGGGAGTTACCTCCCACGCATCCCATTCGATTGGGTTTGGCTTTGAACTTCTCTGTGTTTTATTATGAAATTTTGAACTCTCCTGAAAGGGCATGTCACCTTGCTAAGCAGGCATTTGATGAAGCAATCTCTGAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGACAGCACATTGATTATGCAGCTTCTAAGGGACAACCTCACATTGTGGACTTCTGACATCCCTGAAGATGGAGATGAGGAACAAAAGGTGGAATCTTCAGGAGCTGTTGGAGGTGAAAATGCATAG

Protein sequence

>MsG0480023088.01.T01

MASTKERENFVYIAKLAEQAERYEEMVEAMKNVAKLDVELTVEERNLLSVGYKNVVGAHRASWRILSSIEHKEESKGNDVNVKRIKEYRHKVESELSNICSDIMSIIDDHLIPSSSAGESSVFFYKMKGDYYRYLAEFKNGDERKEAADHSMEAYQTASTAAEGELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGDEEQKVESSGAVGGENA*