Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003942.01.T01 | XP_003590585.1 | 99.59 | 244 | 1 | 0 | 1 | 244 | 1 | 244 | 1.30E-172 | 485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003942.01.T01 | Q9SA63 | 76.518 | 247 | 54 | 1 | 1 | 243 | 1 | 247 | 1.99E-136 | 386 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003942.01.T01 | G7IDK0 | 99.590 | 244 | 1 | 0 | 1 | 244 | 1 | 244 | 6.23e-173 | 485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048802.01 | MsG0180003942.01 | -0.823519 | 1.325693e-53 | 1.144104e-50 |
| MsG0080048878.01 | MsG0180003942.01 | -0.804288 | 2.321673e-49 | 1.192441e-46 |
| MsG0080049029.01 | MsG0180003942.01 | -0.813898 | 2.027582e-51 | 1.340726e-48 |
| MsG0080049040.01 | MsG0180003942.01 | -0.811434 | 7.014338e-51 | 4.341596e-48 |
| MsG0080049068.01 | MsG0180003942.01 | -0.848450 | 6.083370e-60 | 1.116920e-56 |
| MsG0080049069.01 | MsG0180003942.01 | -0.856782 | 2.548682e-62 | 6.151660e-59 |
| MsG0180000010.01 | MsG0180003942.01 | 0.867273 | 1.544919e-65 | 5.361793e-62 |
| MsG0180000355.01 | MsG0180003942.01 | -0.825925 | 3.592153e-54 | 3.320111e-51 |
| MsG0180001175.01 | MsG0180003942.01 | -0.812909 | 3.343746e-51 | 2.152540e-48 |
| MsG0180001270.01 | MsG0180003942.01 | -0.839231 | 1.793303e-57 | 2.460834e-54 |
| MsG0180002700.01 | MsG0180003942.01 | -0.841950 | 3.481203e-58 | 5.197587e-55 |
| MsG0180003246.01 | MsG0180003942.01 | 0.820531 | 6.529532e-53 | 5.179760e-50 |
| MsG0180003767.01 | MsG0180003942.01 | 0.823165 | 1.604432e-53 | 1.370856e-50 |
| MsG0180003821.01 | MsG0180003942.01 | -0.820545 | 6.481889e-53 | 5.144012e-50 |
| MsG0180003942.01 | MsG0180004006.01 | -0.839690 | 1.362914e-57 | 1.896624e-54 |
| MsG0180003942.01 | MsG0180004115.01 | -0.803425 | 3.507852e-49 | 1.762190e-46 |
| MsG0180003942.01 | MsG0180004276.01 | -0.823496 | 1.342728e-53 | 1.158067e-50 |
| MsG0180003942.01 | MsG0180004448.01 | -0.812179 | 4.828207e-51 | 3.048574e-48 |
| MsG0180003942.01 | MsG0180004493.01 | -0.808627 | 2.822611e-50 | 1.621783e-47 |
| MsG0180003942.01 | MsG0180004750.01 | -0.804631 | 1.968878e-49 | 1.020192e-46 |
| MsG0180003942.01 | MsG0180004954.01 | 0.817423 | 3.323639e-52 | 2.419532e-49 |
| MsG0180003942.01 | MsG0180005395.01 | 0.858610 | 7.322264e-63 | 1.879565e-59 |
| MsG0180003942.01 | MsG0180005871.01 | 0.813196 | 2.892699e-51 | 1.876561e-48 |
| MsG0180003942.01 | MsG0180005918.01 | 0.800045 | 1.732722e-48 | 7.987811e-46 |
| MsG0180003942.01 | MsG0180005961.01 | -0.809084 | 2.253541e-50 | 1.310685e-47 |
| MsG0180003942.01 | MsG0180005964.01 | -0.852367 | 4.837505e-61 | 1.008528e-57 |
| MsG0180003942.01 | MsG0280006306.01 | 0.807443 | 5.042552e-50 | 2.808941e-47 |
| MsG0180003942.01 | MsG0280007193.01 | 0.853783 | 1.901377e-61 | 4.155735e-58 |
| MsG0180003942.01 | MsG0280007194.01 | 0.803159 | 3.981075e-49 | 1.986326e-46 |
| MsG0180003942.01 | MsG0280007211.01 | 0.806526 | 7.881657e-50 | 4.287508e-47 |
| MsG0180003942.01 | MsG0280007852.01 | -0.825666 | 4.138900e-54 | 3.797212e-51 |
| MsG0180003942.01 | MsG0280007883.01 | -0.800693 | 1.278347e-48 | 5.990862e-46 |
| MsG0180003942.01 | MsG0280008388.01 | -0.820640 | 6.164455e-53 | 4.904538e-50 |
| MsG0180003942.01 | MsG0280008394.01 | -0.835745 | 1.403494e-56 | 1.732150e-53 |
| MsG0180003942.01 | MsG0280008660.01 | 0.801326 | 9.493632e-49 | 4.520957e-46 |
| MsG0180003942.01 | MsG0280008928.01 | -0.841069 | 5.941094e-58 | 8.628750e-55 |
| MsG0180003942.01 | MsG0280008929.01 | -0.836080 | 1.153596e-56 | 1.438306e-53 |
| MsG0180003942.01 | MsG0280009685.01 | -0.826518 | 2.595669e-54 | 2.439746e-51 |
| MsG0180003942.01 | MsG0280009756.01 | -0.825487 | 4.564679e-54 | 4.166301e-51 |
| MsG0180003942.01 | MsG0280010353.01 | -0.822743 | 2.012266e-53 | 1.699022e-50 |
| MsG0180003942.01 | MsG0280011073.01 | -0.800725 | 1.259577e-48 | 5.907658e-46 |
| MsG0180003942.01 | MsG0280011440.01 | 0.849267 | 3.608575e-60 | 6.803582e-57 |
| MsG0180003942.01 | MsG0380012868.01 | -0.844899 | 5.680398e-59 | 9.304269e-56 |
| MsG0180003942.01 | MsG0380014584.01 | -0.806545 | 7.809647e-50 | 4.250529e-47 |
| MsG0180003942.01 | MsG0380014588.01 | -0.806327 | 8.682801e-50 | 4.699440e-47 |
| MsG0180003942.01 | MsG0380015066.01 | 0.812393 | 4.337549e-51 | 2.754661e-48 |
| MsG0180003942.01 | MsG0380015603.01 | -0.800512 | 1.391802e-48 | 6.492797e-46 |
| MsG0180003942.01 | MsG0380015849.01 | 0.813495 | 2.487305e-51 | 1.626900e-48 |
| MsG0180003942.01 | MsG0380016057.01 | -0.802895 | 4.514354e-49 | 2.237314e-46 |
| MsG0180003942.01 | MsG0380016188.01 | 0.808575 | 2.895204e-50 | 1.661323e-47 |
| MsG0180003942.01 | MsG0380016194.01 | -0.806731 | 7.134405e-50 | 3.901521e-47 |
| MsG0180003942.01 | MsG0380016347.01 | 0.833583 | 4.906910e-56 | 5.675342e-53 |
| MsG0180003942.01 | MsG0380016425.01 | 0.816119 | 6.516233e-52 | 4.577280e-49 |
| MsG0180003942.01 | MsG0380016471.01 | -0.812250 | 4.659272e-51 | 2.947601e-48 |
| MsG0180003942.01 | MsG0380016544.01 | -0.800712 | 1.267052e-48 | 5.940624e-46 |
| MsG0180003942.01 | MsG0380016619.01 | 0.804588 | 2.010342e-49 | 1.040533e-46 |
| MsG0180003942.01 | MsG0380016820.01 | -0.800915 | 1.151858e-48 | 5.428915e-46 |
| MsG0180003942.01 | MsG0380017094.01 | 0.844023 | 9.774161e-59 | 1.557621e-55 |
| MsG0180003942.01 | MsG0380017427.01 | -0.847198 | 1.345755e-59 | 2.373608e-56 |
| MsG0180003942.01 | MsG0380017703.01 | -0.800419 | 1.454179e-48 | 6.767976e-46 |
| MsG0180003942.01 | MsG0480018644.01 | -0.859285 | 4.597320e-63 | 1.207743e-59 |
| MsG0180003942.01 | MsG0480018850.01 | -0.843759 | 1.149726e-58 | 1.817055e-55 |
| MsG0180003942.01 | MsG0480018911.01 | -0.800895 | 1.162606e-48 | 5.476884e-46 |
| MsG0180003942.01 | MsG0480019843.01 | 0.805517 | 1.284809e-49 | 6.810883e-47 |
| MsG0180003942.01 | MsG0480020690.01 | -0.846813 | 1.715192e-59 | 2.988269e-56 |
| MsG0180003942.01 | MsG0480020753.01 | -0.828358 | 9.398533e-55 | 9.319876e-52 |
| MsG0180003942.01 | MsG0480021768.01 | -0.802221 | 6.218839e-49 | 3.029412e-46 |
| MsG0180003942.01 | MsG0480021776.01 | 0.834764 | 2.481439e-56 | 2.973333e-53 |
| MsG0180003942.01 | MsG0480022239.01 | -0.839686 | 1.365939e-57 | 1.900627e-54 |
| MsG0180003942.01 | MsG0480022401.01 | -0.806056 | 9.899135e-50 | 5.321031e-47 |
| MsG0180003942.01 | MsG0480022647.01 | -0.814914 | 1.208518e-51 | 8.213448e-49 |
| MsG0180003942.01 | MsG0480022801.01 | 0.807371 | 5.222458e-50 | 2.903697e-47 |
| MsG0180003942.01 | MsG0480022872.01 | 0.834540 | 2.825359e-56 | 3.363434e-53 |
| MsG0180003942.01 | MsG0480023652.01 | -0.804789 | 1.824733e-49 | 9.494456e-47 |
| MsG0180003942.01 | MsG0580024535.01 | 0.814502 | 1.490955e-51 | 1.002225e-48 |
| MsG0180003942.01 | MsG0580024930.01 | 0.830281 | 3.208689e-55 | 3.365167e-52 |
| MsG0180003942.01 | MsG0580025047.01 | 0.812638 | 3.833180e-51 | 2.450107e-48 |
| MsG0180003942.01 | MsG0580025187.01 | 0.803525 | 3.344640e-49 | 1.684590e-46 |
| MsG0180003942.01 | MsG0580025366.01 | -0.802090 | 6.615292e-49 | 3.211946e-46 |
| MsG0180003942.01 | MsG0580025369.01 | 0.815870 | 7.407403e-52 | 5.167645e-49 |
| MsG0180003942.01 | MsG0580025561.01 | 0.841106 | 5.811278e-58 | 8.449937e-55 |
| MsG0180003942.01 | MsG0580025627.01 | -0.876182 | 1.711559e-68 | 8.218891e-65 |
| MsG0180003942.01 | MsG0580025971.01 | -0.850570 | 1.558893e-60 | 3.066754e-57 |
| MsG0180003942.01 | MsG0580026206.01 | -0.815004 | 1.154121e-51 | 7.863510e-49 |
| MsG0180003942.01 | MsG0580027183.01 | -0.827037 | 1.951579e-54 | 1.862069e-51 |
| MsG0180003942.01 | MsG0580027189.01 | -0.854321 | 1.330932e-61 | 2.960689e-58 |
| MsG0180003942.01 | MsG0580027394.01 | -0.823492 | 1.345114e-53 | 1.160006e-50 |
| MsG0180003942.01 | MsG0580029325.01 | -0.862206 | 5.971402e-64 | 1.734809e-60 |
| MsG0180003942.01 | MsG0580029522.01 | 0.815008 | 1.151675e-51 | 7.847768e-49 |
| MsG0180003942.01 | MsG0680030627.01 | -0.803214 | 3.879656e-49 | 1.938382e-46 |
| MsG0180003942.01 | MsG0680031010.01 | -0.812386 | 4.352507e-51 | 2.763549e-48 |
| MsG0180003942.01 | MsG0680031826.01 | -0.804568 | 2.029895e-49 | 1.050098e-46 |
| MsG0180003942.01 | MsG0680032510.01 | 0.816987 | 4.165017e-52 | 2.996165e-49 |
| MsG0180003942.01 | MsG0680032850.01 | -0.878898 | 1.934944e-69 | 1.027670e-65 |
| MsG0180003942.01 | MsG0680033377.01 | -0.836607 | 8.477336e-57 | 1.073644e-53 |
| MsG0180003942.01 | MsG0680034064.01 | -0.835615 | 1.513294e-56 | 1.860363e-53 |
| MsG0180003942.01 | MsG0780035960.01 | -0.814252 | 1.693316e-51 | 1.130501e-48 |
| MsG0180003942.01 | MsG0780035992.01 | -0.802105 | 6.568108e-49 | 3.190203e-46 |
| MsG0180003942.01 | MsG0780036347.01 | 0.847596 | 1.046600e-59 | 1.869633e-56 |
| MsG0180003942.01 | MsG0780036792.01 | -0.804438 | 2.160060e-49 | 1.113706e-46 |
| MsG0180003942.01 | MsG0780037506.01 | 0.811177 | 7.975517e-51 | 4.902972e-48 |
| MsG0180003942.01 | MsG0780037662.01 | -0.819095 | 1.390494e-52 | 1.059888e-49 |
| MsG0180003942.01 | MsG0780038348.01 | -0.809551 | 1.789171e-50 | 1.053657e-47 |
| MsG0180003942.01 | MsG0780038584.01 | 0.881154 | 3.038499e-70 | 1.760492e-66 |
| MsG0180003942.01 | MsG0780038784.01 | -0.845181 | 4.765816e-59 | 7.876571e-56 |
| MsG0180003942.01 | MsG0780039161.01 | -0.802738 | 4.864873e-49 | 2.401417e-46 |
| MsG0180003942.01 | MsG0780039675.01 | -0.834217 | 3.406125e-56 | 4.015157e-53 |
| MsG0180003942.01 | MsG0780039747.01 | 0.834225 | 3.389242e-56 | 3.996225e-53 |
| MsG0180003942.01 | MsG0780039997.01 | 0.890556 | 8.857091e-74 | 7.484889e-70 |
| MsG0180003942.01 | MsG0780040284.01 | -0.819718 | 1.002731e-52 | 7.776835e-50 |
| MsG0180003942.01 | MsG0780040825.01 | 0.827305 | 1.684059e-54 | 1.619557e-51 |
| MsG0180003942.01 | MsG0780040826.01 | 0.821190 | 4.606380e-53 | 3.721989e-50 |
| MsG0180003942.01 | MsG0780041156.01 | 0.803003 | 4.288439e-49 | 2.131016e-46 |
| MsG0180003942.01 | MsG0880042890.01 | -0.801159 | 1.027033e-48 | 4.870464e-46 |
| MsG0180003942.01 | MsG0880043024.01 | -0.840675 | 7.538243e-58 | 1.081654e-54 |
| MsG0180003942.01 | MsG0880043029.01 | -0.805557 | 1.260028e-49 | 6.686477e-47 |
| MsG0180003942.01 | MsG0880044142.01 | -0.809628 | 1.722775e-50 | 1.016684e-47 |
| MsG0180003942.01 | MsG0880044392.01 | -0.810410 | 1.168928e-50 | 7.040645e-48 |
| MsG0180003942.01 | MsG0880044524.01 | -0.820397 | 7.010543e-53 | 5.541066e-50 |
| MsG0180003942.01 | MsG0880045010.01 | 0.809304 | 2.021293e-50 | 1.182538e-47 |
| MsG0180003942.01 | MsG0880045327.01 | -0.832733 | 7.986128e-56 | 9.005184e-53 |
| MsG0180003942.01 | MsG0880046765.01 | -0.819909 | 9.066364e-53 | 7.069442e-50 |
| MsG0180003942.01 | MsG0880046867.01 | -0.830492 | 2.848878e-55 | 3.006071e-52 |
| MsG0180003942.01 | MsG0880047168.01 | -0.801144 | 1.034439e-48 | 4.903702e-46 |
| MsG0180003942.01 | MsG0880047422.01 | 0.823161 | 1.607692e-53 | 1.373478e-50 |
| MsG0180003942.01 | MsG0880047656.01 | -0.845323 | 4.362381e-59 | 7.243404e-56 |
| MsG0180003942.01 | MsG0880047703.01 | -0.814367 | 1.597429e-51 | 1.069801e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180003942.01 | MsG0880046112.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003942.01.T01 | MTR_1g071430 | 99.590 | 244 | 1 | 0 | 1 | 244 | 1 | 244 | 1.58e-176 | 485 |
| MsG0180003942.01.T01 | MTR_7g095640 | 76.170 | 235 | 56 | 0 | 9 | 243 | 3 | 237 | 2.58e-115 | 330 |
| MsG0180003942.01.T01 | MTR_7g095510 | 59.483 | 232 | 94 | 0 | 8 | 239 | 2 | 233 | 1.55e-86 | 257 |
| MsG0180003942.01.T01 | MTR_7g095600 | 58.650 | 237 | 94 | 2 | 10 | 242 | 4 | 240 | 1.04e-85 | 255 |
| MsG0180003942.01.T01 | MTR_7g095530 | 56.034 | 232 | 102 | 0 | 8 | 239 | 2 | 233 | 2.20e-84 | 252 |
| MsG0180003942.01.T01 | MTR_1g110390 | 49.789 | 237 | 114 | 1 | 9 | 240 | 2 | 238 | 1.50e-76 | 231 |
| MsG0180003942.01.T01 | MTR_2g021130 | 50.855 | 234 | 110 | 3 | 12 | 244 | 28 | 257 | 8.70e-74 | 225 |
| MsG0180003942.01.T01 | MTR_7g095550 | 58.667 | 75 | 31 | 0 | 123 | 197 | 19 | 93 | 2.93e-23 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003942.01.T01 | AT1G03070 | 76.518 | 247 | 54 | 1 | 1 | 243 | 1 | 247 | 2.02e-137 | 386 |
| MsG0180003942.01.T01 | AT1G03070 | 76.518 | 247 | 54 | 1 | 1 | 243 | 1 | 247 | 2.02e-137 | 386 |
| MsG0180003942.01.T01 | AT1G03070 | 76.518 | 247 | 54 | 1 | 1 | 243 | 1 | 247 | 2.02e-137 | 386 |
| MsG0180003942.01.T01 | AT3G63310 | 74.590 | 244 | 57 | 1 | 1 | 244 | 1 | 239 | 4.81e-129 | 365 |
| MsG0180003942.01.T01 | AT4G02690 | 74.286 | 245 | 59 | 2 | 1 | 241 | 1 | 245 | 4.06e-123 | 350 |
| MsG0180003942.01.T01 | AT4G02690 | 62.449 | 245 | 50 | 3 | 1 | 241 | 1 | 207 | 2.05e-90 | 266 |
| MsG0180003942.01.T01 | AT4G14730 | 56.957 | 230 | 98 | 1 | 10 | 238 | 3 | 232 | 1.16e-89 | 265 |
| MsG0180003942.01.T01 | AT4G15470 | 52.419 | 248 | 111 | 5 | 1 | 244 | 12 | 256 | 1.91e-81 | 244 |
Find 69 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGACTCTCTACACATTT+TGG | 0.130439 | 1:+70698997 | MsG0180003942.01.T01:CDS |
| GGCTTCTGTCTCCTTATATT+TGG | 0.136616 | 1:+70699317 | MsG0180003942.01.T01:CDS |
| TCCACATCTTCTTGAGTTTC+CGG | 0.192644 | 1:-70697582 | None:intergenic |
| ATACTAGTTCTTATGGTCTT+TGG | 0.193055 | 1:+70699074 | MsG0180003942.01.T01:CDS |
| CTCTCGCTTTCGTTTGTTGT+TGG | 0.232029 | 1:+70698019 | MsG0180003942.01.T01:CDS |
| TGGTGCTATACTAGTTCTTA+TGG | 0.241827 | 1:+70699067 | MsG0180003942.01.T01:CDS |
| TACTAGTTCTTATGGTCTTT+GGG | 0.245956 | 1:+70699075 | MsG0180003942.01.T01:CDS |
| TACGAAAACAAGTTCTTATC+TGG | 0.260330 | 1:+70699451 | MsG0180003942.01.T01:three_prime_UTR |
| TATGGTCTTTGGGATGATTC+AGG | 0.268186 | 1:+70699085 | MsG0180003942.01.T01:CDS |
| TTCCTTGGCCCCTTCTTGTT+TGG | 0.270915 | 1:+70699047 | MsG0180003942.01.T01:CDS |
| GAGGGAAAATGCGAGAAAAT+TGG | 0.304601 | 1:-70697533 | None:intergenic |
| ATAAAGGACCATCGGAGTTC+GGG | 0.315673 | 1:-70697679 | None:intergenic |
| GTTGATGATGTCCAAATATA+AGG | 0.321463 | 1:-70699328 | None:intergenic |
| GTTGTCCCTGTTTCTCGTAC+TGG | 0.324925 | 1:+70699497 | MsG0180003942.01.T01:three_prime_UTR |
| ATTCCTATGATGAATTCATT+TGG | 0.330140 | 1:+70699295 | MsG0180003942.01.T01:CDS |
| GTATGCAGAGAAAGTTATTC+TGG | 0.331873 | 1:+70698941 | MsG0180003942.01.T01:intron |
| TTCCTATGATGAATTCATTT+GGG | 0.372763 | 1:+70699296 | MsG0180003942.01.T01:CDS |
| GTTGAAGTTCTTGTAGTCAT+TGG | 0.373756 | 1:+70699391 | MsG0180003942.01.T01:exon |
| GATAATCCAGTACGAGAAAC+AGG | 0.378815 | 1:-70699503 | None:intergenic |
| AAGTTATCTACAATGATCTA+TGG | 0.395967 | 1:+70699207 | MsG0180003942.01.T01:CDS |
| GATAAAGGACCATCGGAGTT+CGG | 0.409614 | 1:-70697680 | None:intergenic |
| GGCTATGATTTCAACTTCCT+TGG | 0.415448 | 1:+70699032 | MsG0180003942.01.T01:CDS |
| GGTAGCGAAGAAAGTGGAAA+TGG | 0.434726 | 1:-70697779 | None:intergenic |
| GGATTATCACACTATTGTTA+AGG | 0.447436 | 1:+70699518 | MsG0180003942.01.T01:three_prime_UTR |
| TAGTGAGCAAAGACAGGAAA+AGG | 0.461448 | 1:-70699350 | None:intergenic |
| TACAATGATCTATGGTTGCT+TGG | 0.466219 | 1:+70699215 | MsG0180003942.01.T01:CDS |
| TCGGGGCTTTCGAGCATCAT+CGG | 0.470230 | 1:-70697661 | None:intergenic |
| TTCTTCGCTACCACCGGCGC+TGG | 0.472313 | 1:+70697790 | MsG0180003942.01.T01:CDS |
| AACTCAAGAAGATGTGGAAT+CGG | 0.480322 | 1:+70697587 | MsG0180003942.01.T01:exon |
| GCAAGCAGAAGGTAATTAAT+CGG | 0.485670 | 1:-70697986 | None:intergenic |
| CGGGGCTTTCGAGCATCATC+GGG | 0.487087 | 1:-70697660 | None:intergenic |
| AGCGCAACGCACTGATGAAA+GGG | 0.488809 | 1:-70697843 | None:intergenic |
| AGCCCAAATGAATTCATCAT+AGG | 0.498521 | 1:-70699298 | None:intergenic |
| ATTCAATGTTCTCTTGAATG+TGG | 0.502746 | 1:+70699618 | MsG0180003942.01.T01:three_prime_UTR |
| TGAAAATAGTGAGCAAAGAC+AGG | 0.506317 | 1:-70699356 | None:intergenic |
| AAGCGCAACGCACTGATGAA+AGG | 0.522068 | 1:-70697844 | None:intergenic |
| CGGGTAGAGAGGTCTTGAAC+CGG | 0.523484 | 1:-70697641 | None:intergenic |
| TAGTATAGCACCAAACAAGA+AGG | 0.529396 | 1:-70699057 | None:intergenic |
| TCCACTTTCTTCGCTACCAC+CGG | 0.539244 | 1:+70697784 | MsG0180003942.01.T01:CDS |
| GAGTGAAAACCGCAAGCAGA+AGG | 0.540358 | 1:-70697997 | None:intergenic |
| GATTAATTACCTTCTGCTTG+CGG | 0.545443 | 1:+70697988 | MsG0180003942.01.T01:CDS |
| TTGAGTTGTGCTTTCACTAG+CGG | 0.547559 | 1:+70698043 | MsG0180003942.01.T01:CDS |
| TTCTGATAGTAGTAGTAAAG+AGG | 0.547927 | 1:-70697959 | None:intergenic |
| CACCAAACAAGAAGGGGCCA+AGG | 0.548467 | 1:-70699049 | None:intergenic |
| TCTTGAACCGGTTTCCACAT+CGG | 0.552788 | 1:-70697629 | None:intergenic |
| TGGAATCGGAATCAACCTTA+CGG | 0.556296 | 1:+70697601 | MsG0180003942.01.T01:CDS |
| TTGGCAGCAATTATATTCTG+TGG | 0.570347 | 1:+70699234 | MsG0180003942.01.T01:CDS |
| GTAGCGAAGAAAGTGGAAAT+GGG | 0.571169 | 1:-70697778 | None:intergenic |
| TGTTATATTGACTGCTGTGG+TGG | 0.576783 | 1:+70698968 | MsG0180003942.01.T01:CDS |
| TACGAGAAACAGGGACAACA+TGG | 0.584147 | 1:-70699493 | None:intergenic |
| AGTATAGCACCAAACAAGAA+GGG | 0.588101 | 1:-70699056 | None:intergenic |
| ACCGGAAACTCAAGAAGATG+TGG | 0.593472 | 1:+70697581 | MsG0180003942.01.T01:exon |
| GACGGCGCCGACAGCGATGG+TGG | 0.596967 | 1:-70697740 | None:intergenic |
| ATTGTAGATAACTTGCCCAA+TGG | 0.603009 | 1:-70699198 | None:intergenic |
| AAGAGCGAGACCAGCGCCGG+TGG | 0.605231 | 1:-70697800 | None:intergenic |
| TCGAAAGCCCCGAACTCCGA+TGG | 0.608560 | 1:+70697671 | MsG0180003942.01.T01:CDS |
| TTACTCGCCACCATCGCTGT+CGG | 0.610080 | 1:+70697733 | MsG0180003942.01.T01:CDS |
| AGCTGTTATATTGACTGCTG+TGG | 0.612381 | 1:+70698965 | MsG0180003942.01.T01:CDS |
| TCGAGCATCATCGGGTAGAG+AGG | 0.614144 | 1:-70697652 | None:intergenic |
| GAAAGTGGAAATGGGACGAA+CGG | 0.622665 | 1:-70697770 | None:intergenic |
| GGGACGAACGGTGACGACGA+CGG | 0.624706 | 1:-70697758 | None:intergenic |
| GACGACGGCGCCGACAGCGA+TGG | 0.625482 | 1:-70697743 | None:intergenic |
| TTTCTCGACTGAGAAAGTGA+GGG | 0.633090 | 1:-70697551 | None:intergenic |
| GTAAAGAGCGAGACCAGCGC+CGG | 0.640236 | 1:-70697803 | None:intergenic |
| GCCGGTGGTAGCGAAGAAAG+TGG | 0.667378 | 1:-70697785 | None:intergenic |
| GTATAGCACCAAACAAGAAG+GGG | 0.669417 | 1:-70699055 | None:intergenic |
| TAAAGGACCATCGGAGTTCG+GGG | 0.669815 | 1:-70697678 | None:intergenic |
| ATAATCCAGTACGAGAAACA+GGG | 0.691034 | 1:-70699502 | None:intergenic |
| TATCTGGTAATAAATCTCTG+TGG | 0.692161 | 1:+70699467 | MsG0180003942.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCGAAATTGAAAGAAATT+AGG | - | Chr1:70697878-70697897 | None:intergenic | 20.0% |
| !! | ACAAAGAGAAATATTCATTT+AGG | + | Chr1:70698323-70698342 | MsG0180003942.01.T01:intron | 20.0% |
| !! | ATCGAAATTGAAAGAAATTA+GGG | - | Chr1:70697877-70697896 | None:intergenic | 20.0% |
| !! | TGTGTATTTGGTTAAAATTT+GGG | + | Chr1:70698165-70698184 | MsG0180003942.01.T01:intron | 20.0% |
| !! | TTTGATTCTGTAATAATTTG+AGG | + | Chr1:70698209-70698228 | MsG0180003942.01.T01:intron | 20.0% |
| !!! | AATTTCTAGGTTGAAATTTA+GGG | + | Chr1:70698270-70698289 | MsG0180003942.01.T01:intron | 20.0% |
| !!! | GATTTCAATTTTTTGTTATC+TGG | + | Chr1:70698725-70698744 | MsG0180003942.01.T01:intron | 20.0% |
| !!! | TAACTAGAATTTGACATTTT+AGG | + | Chr1:70698360-70698379 | MsG0180003942.01.T01:intron | 20.0% |
| !!! | TTTTGTTTTAATCACACAAT+CGG | - | Chr1:70698767-70698786 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTCATTGCAATTT+GGG | + | Chr1:70698294-70698313 | MsG0180003942.01.T01:intron | 20.0% |
| !!! | TTTTTTTTGTCATTGCAATT+TGG | + | Chr1:70698293-70698312 | MsG0180003942.01.T01:intron | 20.0% |
| ! | AAGTTATCTACAATGATCTA+TGG | + | Chr1:70699207-70699226 | MsG0180003942.01.T01:CDS | 25.0% |
| ! | AGAAATATTCATTTAGGAAC+TGG | + | Chr1:70698329-70698348 | MsG0180003942.01.T01:intron | 25.0% |
| ! | ATATGTGTTAATTGATTAGG+TGG | + | Chr1:70698603-70698622 | MsG0180003942.01.T01:intron | 25.0% |
| ! | ATTCCTATGATGAATTCATT+TGG | + | Chr1:70699295-70699314 | MsG0180003942.01.T01:CDS | 25.0% |
| ! | CGAATATGTGTTAATTGATT+AGG | + | Chr1:70698600-70698619 | MsG0180003942.01.T01:intron | 25.0% |
| ! | GTGTGTATTTGGTTAAAATT+TGG | + | Chr1:70698164-70698183 | MsG0180003942.01.T01:intron | 25.0% |
| ! | TATGTGTTAATTGATTAGGT+GGG | + | Chr1:70698604-70698623 | MsG0180003942.01.T01:intron | 25.0% |
| ! | TATTTAACCGTTTAATGTTC+TGG | + | Chr1:70699135-70699154 | MsG0180003942.01.T01:intron | 25.0% |
| ! | TTATTTCCTTTCATTGAGAA+TGG | + | Chr1:70698696-70698715 | MsG0180003942.01.T01:intron | 25.0% |
| ! | TTCCTATGATGAATTCATTT+GGG | + | Chr1:70699296-70699315 | MsG0180003942.01.T01:CDS | 25.0% |
| ! | TTGCTTTGATTGTAGTAATT+TGG | + | Chr1:70698115-70698134 | MsG0180003942.01.T01:intron | 25.0% |
| !! | CAAATTTGTAATTTGCAGTT+AGG | + | Chr1:70698801-70698820 | MsG0180003942.01.T01:intron | 25.0% |
| !! | CAATTTCTAGGTTGAAATTT+AGG | + | Chr1:70698269-70698288 | MsG0180003942.01.T01:intron | 25.0% |
| !! | TTTGCTGAATTTTTCCTAAT+GGG | + | Chr1:70698908-70698927 | MsG0180003942.01.T01:intron | 25.0% |
| !! | TTTTCTGAATTGTGTGTATT+TGG | + | Chr1:70698153-70698172 | MsG0180003942.01.T01:intron | 25.0% |
| !! | TTTTGCTGAATTTTTCCTAA+TGG | + | Chr1:70698907-70698926 | MsG0180003942.01.T01:intron | 25.0% |
| !!! | AAAATTGGTTTTAGGGATTT+TGG | - | Chr1:70697521-70697540 | None:intergenic | 25.0% |
| !!! | TTTGTTATAAGTCTTTTCTG+TGG | + | Chr1:70698646-70698665 | MsG0180003942.01.T01:intron | 25.0% |
| AAAGGAAATAACTAACCAGT+AGG | - | Chr1:70698687-70698706 | None:intergenic | 30.0% | |
| AATGTCACCAGAACATTAAA+CGG | - | Chr1:70699145-70699164 | None:intergenic | 30.0% | |
| ATTCAATGTTCTCTTGAATG+TGG | + | Chr1:70699618-70699637 | MsG0180003942.01.T01:three_prime_UTR | 30.0% | |
| GAAAAGAAAGAAAGCAGAAA+TGG | - | Chr1:70698085-70698104 | None:intergenic | 30.0% | |
| GAACTTGAGTTTCAATTTCT+AGG | + | Chr1:70698257-70698276 | MsG0180003942.01.T01:intron | 30.0% | |
| GGATTATCACACTATTGTTA+AGG | + | Chr1:70699518-70699537 | MsG0180003942.01.T01:three_prime_UTR | 30.0% | |
| TACGAAAACAAGTTCTTATC+TGG | + | Chr1:70699451-70699470 | MsG0180003942.01.T01:three_prime_UTR | 30.0% | |
| TATCTGGTAATAAATCTCTG+TGG | + | Chr1:70699467-70699486 | MsG0180003942.01.T01:three_prime_UTR | 30.0% | |
| TTCTGATAGTAGTAGTAAAG+AGG | - | Chr1:70697962-70697981 | None:intergenic | 30.0% | |
| ! | AATTTTTCCTAATGGGAATG+GGG | + | Chr1:70698915-70698934 | MsG0180003942.01.T01:intron | 30.0% |
| ! | ATACTAGTTCTTATGGTCTT+TGG | + | Chr1:70699074-70699093 | MsG0180003942.01.T01:CDS | 30.0% |
| ! | GAATTTTTCCTAATGGGAAT+GGG | + | Chr1:70698914-70698933 | MsG0180003942.01.T01:intron | 30.0% |
| ! | GGTTAAAATTTGGGATTGAT+TGG | + | Chr1:70698174-70698193 | MsG0180003942.01.T01:intron | 30.0% |
| ! | TAAGTCTTTTCTGTGGTTAT+TGG | + | Chr1:70698653-70698672 | MsG0180003942.01.T01:intron | 30.0% |
| ! | TACTAGTTCTTATGGTCTTT+GGG | + | Chr1:70699075-70699094 | MsG0180003942.01.T01:CDS | 30.0% |
| ! | TGAATTTTTCCTAATGGGAA+TGG | + | Chr1:70698913-70698932 | MsG0180003942.01.T01:intron | 30.0% |
| ! | TTGCAGATTTTCTTTCCATT+GGG | + | Chr1:70699183-70699202 | MsG0180003942.01.T01:intron | 30.0% |
| !! | AGAATTGCCTACTTTTATGT+GGG | + | Chr1:70698883-70698902 | MsG0180003942.01.T01:intron | 30.0% |
| !! | GTTGATGATGTCCAAATATA+AGG | - | Chr1:70699331-70699350 | None:intergenic | 30.0% |
| !! | TGTTGTTTAATTTGTCGACT+TGG | + | Chr1:70698235-70698254 | MsG0180003942.01.T01:intron | 30.0% |
| !!! | AATGCGAGAAAATTGGTTTT+AGG | - | Chr1:70697529-70697548 | None:intergenic | 30.0% |
| !!! | ATGCGAGAAAATTGGTTTTA+GGG | - | Chr1:70697528-70697547 | None:intergenic | 30.0% |
| !!! | TAGGAGTTACATTGCTATTT+TGG | + | Chr1:70698820-70698839 | MsG0180003942.01.T01:intron | 30.0% |
| AACTCAAGAAGATGTGGAAT+CGG | + | Chr1:70697587-70697606 | MsG0180003942.01.T01:exon | 35.0% | |
| AGCCCAAATGAATTCATCAT+AGG | - | Chr1:70699301-70699320 | None:intergenic | 35.0% | |
| AGTATAGCACCAAACAAGAA+GGG | - | Chr1:70699059-70699078 | None:intergenic | 35.0% | |
| ATAATCCAGTACGAGAAACA+GGG | - | Chr1:70699505-70699524 | None:intergenic | 35.0% | |
| GATTAATTACCTTCTGCTTG+CGG | + | Chr1:70697988-70698007 | MsG0180003942.01.T01:CDS | 35.0% | |
| GCAAAAACCCACATAAAAGT+AGG | - | Chr1:70698893-70698912 | None:intergenic | 35.0% | |
| GCAAGCAGAAGGTAATTAAT+CGG | - | Chr1:70697989-70698008 | None:intergenic | 35.0% | |
| GTATGCAGAGAAAGTTATTC+TGG | + | Chr1:70698941-70698960 | MsG0180003942.01.T01:intron | 35.0% | |
| GTTGAAGTTCTTGTAGTCAT+TGG | + | Chr1:70699391-70699410 | MsG0180003942.01.T01:exon | 35.0% | |
| TACAATGATCTATGGTTGCT+TGG | + | Chr1:70699215-70699234 | MsG0180003942.01.T01:CDS | 35.0% | |
| TAGTATAGCACCAAACAAGA+AGG | - | Chr1:70699060-70699079 | None:intergenic | 35.0% | |
| TGAAAATAGTGAGCAAAGAC+AGG | - | Chr1:70699359-70699378 | None:intergenic | 35.0% | |
| TTGGCAGCAATTATATTCTG+TGG | + | Chr1:70699234-70699253 | MsG0180003942.01.T01:CDS | 35.0% | |
| ! | ATTGTAGATAACTTGCCCAA+TGG | - | Chr1:70699201-70699220 | None:intergenic | 35.0% |
| ! | CTTGCAGATTTTCTTTCCAT+TGG | + | Chr1:70699182-70699201 | MsG0180003942.01.T01:intron | 35.0% |
| ! | CTTTTCTGATAAAGGACCAT+CGG | - | Chr1:70697690-70697709 | None:intergenic | 35.0% |
| ! | GACGTAGACTTTTCTGATAA+AGG | - | Chr1:70697698-70697717 | None:intergenic | 35.0% |
| ! | TCTGACTCTCTACACATTTT+GGG | + | Chr1:70698998-70699017 | MsG0180003942.01.T01:CDS | 35.0% |
| !! | ACGTACTAGTTGTTTTCTGA+TGG | + | Chr1:70699415-70699434 | MsG0180003942.01.T01:three_prime_UTR | 35.0% |
| !! | CGTACTAGTTGTTTTCTGAT+GGG | + | Chr1:70699416-70699435 | MsG0180003942.01.T01:three_prime_UTR | 35.0% |
| !! | GAGAATTGCCTACTTTTATG+TGG | + | Chr1:70698882-70698901 | MsG0180003942.01.T01:intron | 35.0% |
| !! | GTACTAGTTGTTTTCTGATG+GGG | + | Chr1:70699417-70699436 | MsG0180003942.01.T01:three_prime_UTR | 35.0% |
| !! | TACTAGTTGTTTTCTGATGG+GGG | + | Chr1:70699418-70699437 | MsG0180003942.01.T01:three_prime_UTR | 35.0% |
| !! | TGGTGCTATACTAGTTCTTA+TGG | + | Chr1:70699067-70699086 | MsG0180003942.01.T01:CDS | 35.0% |
| !! | TTATTGGAGTTTTGACCTAC+TGG | + | Chr1:70698669-70698688 | MsG0180003942.01.T01:intron | 35.0% |
| ATACAAACCCCATTCCCATT+AGG | - | Chr1:70698925-70698944 | None:intergenic | 40.0% | |
| CAGTCGAGAAAAAACTTCAC+CGG | + | Chr1:70697563-70697582 | MsG0180003942.01.T01:five_prime_UTR | 40.0% | |
| GAGGGAAAATGCGAGAAAAT+TGG | - | Chr1:70697536-70697555 | None:intergenic | 40.0% | |
| GATAATCCAGTACGAGAAAC+AGG | - | Chr1:70699506-70699525 | None:intergenic | 40.0% | |
| GGCTATGATTTCAACTTCCT+TGG | + | Chr1:70699032-70699051 | MsG0180003942.01.T01:CDS | 40.0% | |
| GGCTTCTGTCTCCTTATATT+TGG | + | Chr1:70699317-70699336 | MsG0180003942.01.T01:CDS | 40.0% | |
| GTAGCGAAGAAAGTGGAAAT+GGG | - | Chr1:70697781-70697800 | None:intergenic | 40.0% | |
| GTATAGCACCAAACAAGAAG+GGG | - | Chr1:70699058-70699077 | None:intergenic | 40.0% | |
| TAGTGAGCAAAGACAGGAAA+AGG | - | Chr1:70699353-70699372 | None:intergenic | 40.0% | |
| TCAGCACCATTCTCAATGAA+AGG | - | Chr1:70698705-70698724 | None:intergenic | 40.0% | |
| TCCACATCTTCTTGAGTTTC+CGG | - | Chr1:70697585-70697604 | None:intergenic | 40.0% | |
| TCTGGTGACATTCTCAATGT+GGG | + | Chr1:70699153-70699172 | MsG0180003942.01.T01:intron | 40.0% | |
| TGGAATCGGAATCAACCTTA+CGG | + | Chr1:70697601-70697620 | MsG0180003942.01.T01:CDS | 40.0% | |
| TGTAATCACATGTGCTGTGT+TGG | + | Chr1:70698498-70698517 | MsG0180003942.01.T01:intron | 40.0% | |
| TTCTGGTGACATTCTCAATG+TGG | + | Chr1:70699152-70699171 | MsG0180003942.01.T01:intron | 40.0% | |
| TTTCTCGACTGAGAAAGTGA+GGG | - | Chr1:70697554-70697573 | None:intergenic | 40.0% | |
| ! | AGCTGTTATATTGACTGCTG+TGG | + | Chr1:70698965-70698984 | MsG0180003942.01.T01:CDS | 40.0% |
| ! | CTCTGACTCTCTACACATTT+TGG | + | Chr1:70698997-70699016 | MsG0180003942.01.T01:CDS | 40.0% |
| ! | TGTTATATTGACTGCTGTGG+TGG | + | Chr1:70698968-70698987 | MsG0180003942.01.T01:CDS | 40.0% |
| ! | TTGAGTTGTGCTTTCACTAG+CGG | + | Chr1:70698043-70698062 | MsG0180003942.01.T01:CDS | 40.0% |
| ! | TTTTCTCGACTGAGAAAGTG+AGG | - | Chr1:70697555-70697574 | None:intergenic | 40.0% |
| !! | ACTAGTTGTTTTCTGATGGG+GGG | + | Chr1:70699419-70699438 | MsG0180003942.01.T01:three_prime_UTR | 40.0% |
| !! | TATGGTCTTTGGGATGATTC+AGG | + | Chr1:70699085-70699104 | MsG0180003942.01.T01:CDS | 40.0% |
| ACCGGAAACTCAAGAAGATG+TGG | + | Chr1:70697581-70697600 | MsG0180003942.01.T01:exon | 45.0% | |
| ACCTTACGGAAAAACCGATG+TGG | + | Chr1:70697615-70697634 | MsG0180003942.01.T01:CDS | 45.0% | |
| ATAAAGGACCATCGGAGTTC+GGG | - | Chr1:70697682-70697701 | None:intergenic | 45.0% | |
| GAAAGTGGAAATGGGACGAA+CGG | - | Chr1:70697773-70697792 | None:intergenic | 45.0% | |
| GATAAAGGACCATCGGAGTT+CGG | - | Chr1:70697683-70697702 | None:intergenic | 45.0% | |
| GGAAAAACCGATGTGGAAAC+CGG | + | Chr1:70697622-70697641 | MsG0180003942.01.T01:CDS | 45.0% | |
| GGTAGCGAAGAAAGTGGAAA+TGG | - | Chr1:70697782-70697801 | None:intergenic | 45.0% | |
| TACGAGAAACAGGGACAACA+TGG | - | Chr1:70699496-70699515 | None:intergenic | 45.0% | |
| ! | ACATTTTGGGCTGCAAGTAG+AGG | + | Chr1:70699011-70699030 | MsG0180003942.01.T01:CDS | 45.0% |
| ! | AGTTGTGCTGCTATGAAGCA+CGG | + | Chr1:70698394-70698413 | MsG0180003942.01.T01:intron | 45.0% |
| ! | TCTTGAACCGGTTTCCACAT+CGG | - | Chr1:70697632-70697651 | None:intergenic | 45.0% |
| !! | CTCTCGCTTTCGTTTGTTGT+TGG | + | Chr1:70698019-70698038 | MsG0180003942.01.T01:CDS | 45.0% |
| !!! | TCCACATCGGTTTTTCCGTA+AGG | - | Chr1:70697619-70697638 | None:intergenic | 45.0% |
| AGGTGGGTGATGTCAAGACA+AGG | + | Chr1:70698620-70698639 | MsG0180003942.01.T01:intron | 50.0% | |
| GAGTGAAAACCGCAAGCAGA+AGG | - | Chr1:70698000-70698019 | None:intergenic | 50.0% | |
| TAAAGGACCATCGGAGTTCG+GGG | - | Chr1:70697681-70697700 | None:intergenic | 50.0% | |
| TCCACTTTCTTCGCTACCAC+CGG | + | Chr1:70697784-70697803 | MsG0180003942.01.T01:CDS | 50.0% | |
| TTCCTTGGCCCCTTCTTGTT+TGG | + | Chr1:70699047-70699066 | MsG0180003942.01.T01:CDS | 50.0% | |
| ! | AAGCGCAACGCACTGATGAA+AGG | - | Chr1:70697847-70697866 | None:intergenic | 50.0% |
| ! | AGCGCAACGCACTGATGAAA+GGG | - | Chr1:70697846-70697865 | None:intergenic | 50.0% |
| ! | GTTGTCCCTGTTTCTCGTAC+TGG | + | Chr1:70699497-70699516 | MsG0180003942.01.T01:three_prime_UTR | 50.0% |
| ! | GTTGTGCTGCTATGAAGCAC+GGG | + | Chr1:70698395-70698414 | MsG0180003942.01.T01:intron | 50.0% |
| ! | GTTTTCTGATGGGGGGTTAG+TGG | + | Chr1:70699426-70699445 | MsG0180003942.01.T01:three_prime_UTR | 50.0% |
| CACCAAACAAGAAGGGGCCA+AGG | - | Chr1:70699052-70699071 | None:intergenic | 55.0% | |
| CGGGTAGAGAGGTCTTGAAC+CGG | - | Chr1:70697644-70697663 | None:intergenic | 55.0% | |
| TCGAGCATCATCGGGTAGAG+AGG | - | Chr1:70697655-70697674 | None:intergenic | 55.0% | |
| TCGGGGCTTTCGAGCATCAT+CGG | - | Chr1:70697664-70697683 | None:intergenic | 55.0% | |
| TTACTCGCCACCATCGCTGT+CGG | + | Chr1:70697733-70697752 | MsG0180003942.01.T01:CDS | 55.0% | |
| ! | ATGCCAGTGCCACTGTCGTA+CGG | - | Chr1:70698427-70698446 | None:intergenic | 55.0% |
| !! | TACGACAGTGGCACTGGCAT+TGG | + | Chr1:70698427-70698446 | MsG0180003942.01.T01:intron | 55.0% |
| CGGGGCTTTCGAGCATCATC+GGG | - | Chr1:70697663-70697682 | None:intergenic | 60.0% | |
| CTGCTATGAAGCACGGGTGC+AGG | + | Chr1:70698401-70698420 | MsG0180003942.01.T01:intron | 60.0% | |
| GTAAAGAGCGAGACCAGCGC+CGG | - | Chr1:70697806-70697825 | None:intergenic | 60.0% | |
| TCGAAAGCCCCGAACTCCGA+TGG | + | Chr1:70697671-70697690 | MsG0180003942.01.T01:CDS | 60.0% | |
| ! | GCCGGTGGTAGCGAAGAAAG+TGG | - | Chr1:70697788-70697807 | None:intergenic | 60.0% |
| AGGCCGTACGACAGTGGCAC+TGG | + | Chr1:70698421-70698440 | MsG0180003942.01.T01:intron | 65.0% | |
| GGGACGAACGGTGACGACGA+CGG | - | Chr1:70697761-70697780 | None:intergenic | 65.0% | |
| TTCTTCGCTACCACCGGCGC+TGG | + | Chr1:70697790-70697809 | MsG0180003942.01.T01:CDS | 65.0% | |
| GGGTGCAGGCCGTACGACAG+TGG | + | Chr1:70698415-70698434 | MsG0180003942.01.T01:intron | 70.0% | |
| ! | AAGAGCGAGACCAGCGCCGG+TGG | - | Chr1:70697803-70697822 | None:intergenic | 70.0% |
| !! | GACGACGGCGCCGACAGCGA+TGG | - | Chr1:70697746-70697765 | None:intergenic | 75.0% |
| !! | GACGGCGCCGACAGCGATGG+TGG | - | Chr1:70697743-70697762 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 70697491 | 70699661 | 70697491 | ID=MsG0180003942.01;Name=MsG0180003942.01 |
| Chr1 | mRNA | 70697491 | 70699661 | 70697491 | ID=MsG0180003942.01.T01;Parent=MsG0180003942.01;Name=MsG0180003942.01.T01;_AED=0.26;_eAED=0.26;_QI=107|1|1|1|1|1|4|266|244 |
| Chr1 | exon | 70697491 | 70697853 | 70697491 | ID=MsG0180003942.01.T01:exon:4619;Parent=MsG0180003942.01.T01 |
| Chr1 | exon | 70697951 | 70698064 | 70697951 | ID=MsG0180003942.01.T01:exon:4620;Parent=MsG0180003942.01.T01 |
| Chr1 | exon | 70698949 | 70699106 | 70698949 | ID=MsG0180003942.01.T01:exon:4621;Parent=MsG0180003942.01.T01 |
| Chr1 | exon | 70699189 | 70699661 | 70699189 | ID=MsG0180003942.01.T01:exon:4622;Parent=MsG0180003942.01.T01 |
| Chr1 | five_prime_UTR | 70697491 | 70697597 | 70697491 | ID=MsG0180003942.01.T01:five_prime_utr;Parent=MsG0180003942.01.T01 |
| Chr1 | CDS | 70697598 | 70697853 | 70697598 | ID=MsG0180003942.01.T01:cds;Parent=MsG0180003942.01.T01 |
| Chr1 | CDS | 70697951 | 70698064 | 70697951 | ID=MsG0180003942.01.T01:cds;Parent=MsG0180003942.01.T01 |
| Chr1 | CDS | 70698949 | 70699106 | 70698949 | ID=MsG0180003942.01.T01:cds;Parent=MsG0180003942.01.T01 |
| Chr1 | CDS | 70699189 | 70699395 | 70699189 | ID=MsG0180003942.01.T01:cds;Parent=MsG0180003942.01.T01 |
| Chr1 | three_prime_UTR | 70699396 | 70699661 | 70699396 | ID=MsG0180003942.01.T01:three_prime_utr;Parent=MsG0180003942.01.T01 |
| Gene Sequence |
| Protein sequence |
