AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008041.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 63 sgRNAs with CRISPR-Local

Find 579 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCTCTTGCTTCTTCTTCT+TGG 0.177544 2:-24650193 None:intergenic
TTCTCGAGGAAACTCGTTAG+AGG 0.349439 2:-24637345 None:intergenic
AAACATTGAACAGCAGTTAC+TGG 0.360556 2:+24641836 MsG0280008041.01.T01:intron
ACCACTACACCCTTGAAGAT+TGG 0.387911 2:-24641863 None:intergenic
GGTTGATTGGACGGATCAAT+TGG 0.393142 2:+24646012 MsG0280008041.01.T01:CDS
GGTTGATTGGACGGATCAAT+TGG 0.393142 2:+24648133 MsG0280008041.01.T01:CDS
ACCTCTACGGCCTTTACTCT+TGG 0.399197 2:-24641447 None:intergenic
CGCCAGATCAAGTGGTTCAA+TGG 0.411365 2:+24644041 MsG0280008041.01.T01:CDS
AACCATTGAACCACTTGATC+TGG 0.414296 2:-24644043 None:intergenic
GAAAGCACACGGATAGTATC+TGG 0.420910 2:+24637269 None:intergenic
TGATGAATAAACAGCTTCTT+CGG 0.422537 2:+24642414 MsG0280008041.01.T01:intron
TACTGGGAAGCCAATCTTCA+AGG 0.438474 2:+24641853 MsG0280008041.01.T01:CDS
TGCAGCAAGACAAATATAAC+AGG 0.449898 2:-24650438 None:intergenic
AGAGTAAAGGCCGTAGAGGT+TGG 0.458900 2:+24641450 MsG0280008041.01.T01:CDS
GAGTAAAGGCCGTAGAGGTT+GGG 0.463520 2:+24641451 MsG0280008041.01.T01:CDS
AAAGAAAGAGAAGAGAAAGT+TGG 0.477792 2:+24650296 MsG0280008041.01.T01:CDS
CTTCTTGCTTGAATCAGCGT+TGG 0.485532 2:-24650361 None:intergenic
ATCATGCCGGGAAACATGGC+TGG 0.485670 2:-24650595 None:intergenic
AACAGACAGTACGGCGAGAA+TGG 0.486185 2:+24644012 MsG0280008041.01.T01:intron
AACAGGTAGTACGGCGAGAA+TGG 0.487422 2:+24645991 MsG0280008041.01.T01:intron
AACAGGTAGTACGGCGAGAA+TGG 0.487422 2:+24648112 MsG0280008041.01.T01:intron
ATCTTCAAGGGTGTAGTGGT+TGG 0.488119 2:+24641866 MsG0280008041.01.T01:CDS
AAGGCTGCAGAAATTACAAT+TGG 0.493666 2:+24650249 MsG0280008041.01.T01:CDS
CGGCAAAGACTGATATCAAA+TGG 0.503500 2:+24638817 MsG0280008041.01.T01:exon
AGAAAGTTGGACCAGGAGGT+TGG 0.507377 2:+24650309 MsG0280008041.01.T01:CDS
TCTTCAAGGGTGTAGTGGTT+GGG 0.507778 2:+24641867 MsG0280008041.01.T01:CDS
TGCAAAATCTCACGGTTCAA+CGG 0.514102 2:+24642452 MsG0280008041.01.T01:CDS
AACATTGAACAGCAGTTACT+GGG 0.518054 2:+24641837 MsG0280008041.01.T01:intron
GTACGGCGAGAATGGTTGAT+TGG 0.519543 2:+24645999 MsG0280008041.01.T01:CDS
GTACGGCGAGAATGGTTGAT+TGG 0.519543 2:+24648120 MsG0280008041.01.T01:CDS
CGGATAGTATCTGGAACCGT+TGG 0.521079 2:+24637278 None:intergenic
TGAAGAATAAACAGCTAGTA+CGG 0.523911 2:+24638797 MsG0280008041.01.T01:intron
TGTCATGAACTCCAACCTCC+TGG 0.529422 2:-24650320 None:intergenic
TTGCTTTGTTCTTCTTCTCG+AGG 0.530185 2:-24637359 None:intergenic
TGATGAGGAGCCAAGAGTAA+AGG 0.531984 2:+24641437 MsG0280008041.01.T01:CDS
TATAATCATGCCGGGAAACA+TGG 0.534943 2:-24650599 None:intergenic
GGATGCTGAATAAACTAGAA+TGG 0.537664 2:+24650404 MsG0280008041.01.T01:three_prime_UTR
TAAGATTATATAATCATGCC+GGG 0.541060 2:-24650607 None:intergenic
TTAAGATTATATAATCATGC+CGG 0.544771 2:-24650608 None:intergenic
TATTGAATTGCAAAATCTCA+CGG 0.562249 2:+24642444 MsG0280008041.01.T01:CDS
ACGATCCTTCCCAACCTCTA+CGG 0.562871 2:-24641460 None:intergenic
GGCTGATACGCCAGATCAAG+TGG 0.564016 2:+24644033 MsG0280008041.01.T01:CDS
GCCAATCTTCAAGGGTGTAG+TGG 0.564789 2:+24641862 MsG0280008041.01.T01:CDS
TAATGAATAAACAGGTAGTA+CGG 0.564872 2:+24645982 MsG0280008041.01.T01:intron
TAATGAATAAACAGGTAGTA+CGG 0.564872 2:+24648103 MsG0280008041.01.T01:intron
CGTGTTAGTTAGAGATCCAA+CGG 0.572514 2:-24637294 None:intergenic
GGCGAGAATGGTTGATTGGA+CGG 0.578181 2:+24646003 MsG0280008041.01.T01:CDS
GGCGAGAATGGTTGATTGGA+CGG 0.578181 2:+24648124 MsG0280008041.01.T01:CDS
AGATGACATGGCTGTAGATA+AGG 0.584278 2:+24650230 MsG0280008041.01.T01:CDS
CAAGGGTGTAGTGGTTGGGA+AGG 0.587035 2:+24641871 MsG0280008041.01.T01:CDS
GAAGAGAAAGTTGGACCAGG+AGG 0.598678 2:+24650305 MsG0280008041.01.T01:CDS
ACTGGGAAGCCAATCTTCAA+GGG 0.600221 2:+24641854 MsG0280008041.01.T01:CDS
GCCAAGAGTAAAGGCCGTAG+AGG 0.606415 2:+24641446 MsG0280008041.01.T01:CDS
TGCTGCAGATGAAGATGACA+TGG 0.609429 2:+24650218 MsG0280008041.01.T01:CDS
AGAGAAGAGAAAGTTGGACC+AGG 0.612707 2:+24650302 MsG0280008041.01.T01:CDS
AGAAATTACAATTGGTGATG+CGG 0.615510 2:+24650257 MsG0280008041.01.T01:CDS
TGATGAATAAACAGACAGTA+CGG 0.627386 2:+24644003 MsG0280008041.01.T01:intron
ACAATGAACAGAAGTTGATG+AGG 0.629868 2:+24641422 MsG0280008041.01.T01:intron
AATTACAATTGGTGATGCGG+AGG 0.631424 2:+24650260 MsG0280008041.01.T01:CDS
AAAGGCCGTAGAGGTTGGGA+AGG 0.635836 2:+24641455 MsG0280008041.01.T01:CDS
ATCCAAGAAGAAGAAGCAAG+AGG 0.669525 2:+24650191 MsG0280008041.01.T01:CDS
TCGTTAGAGGAAACTCGTGA+AGG 0.694163 2:-24637332 None:intergenic
GGAGGTTGGAGTTCATGACA+AGG 0.700265 2:+24650323 MsG0280008041.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTAATTTTTTAT+TGG + Chr2:24644390-24644409 MsG0280008041.01.T01:intron 0.0%
!!! TTATAATATAATTTTTATTT+TGG + Chr2:24643411-24643430 MsG0280008041.01.T01:intron 0.0%
!! AAAAAAATAGAAAATGAAAT+TGG - Chr2:24644780-24644799 None:intergenic 10.0%
!! AAAAAATAGAAAATGAAATT+GGG - Chr2:24644779-24644798 None:intergenic 10.0%
!! AAAAATAAAAGTTCATTTAT+TGG + Chr2:24639309-24639328 MsG0280008041.01.T01:intron 10.0%
!! AAAATAATAGAAAATGAAAT+TGG - Chr2:24645135-24645154 None:intergenic 10.0%
!! AAATAATAGAAAATGAAATT+GGG - Chr2:24645134-24645153 None:intergenic 10.0%
!! AACATAATACTATTTAATAA+TGG + Chr2:24639623-24639642 MsG0280008041.01.T01:intron 10.0%
!! AATAATAAAAGTTCAAATAT+TGG + Chr2:24646303-24646322 MsG0280008041.01.T01:intron 10.0%
!! AATAATAAAAGTTCATATAT+TGG + Chr2:24642964-24642983 MsG0280008041.01.T01:intron 10.0%
!! ATATAAAAATTAGTATTAAC+TGG - Chr2:24639594-24639613 None:intergenic 10.0%
!! ATTAAATATAAGATTTACTA+AGG - Chr2:24639534-24639553 None:intergenic 10.0%
!! TTAAACTAAATTTGAATATT+TGG - Chr2:24638007-24638026 None:intergenic 10.0%
!!! ACTTTCTTTTTTTAATTATT+TGG + Chr2:24643244-24643263 MsG0280008041.01.T01:intron 10.0%
!!! GATTGATTTTTTTTTTTTTT+TGG + Chr2:24642647-24642666 MsG0280008041.01.T01:intron 10.0%
!!! TAATATAATTTTTATTTTGG+CGG + Chr2:24643414-24643433 MsG0280008041.01.T01:intron 10.0%
!!! TTATAATATATGTTTGTTTT+TGG + Chr2:24644609-24644628 MsG0280008041.01.T01:intron 10.0%
!!! TTATTTTTTTCCTTTTTTTT+TGG + Chr2:24640292-24640311 MsG0280008041.01.T01:intron 10.0%
!! AAAAAAAAATTAAGAATAGC+AGG - Chr2:24643183-24643202 None:intergenic 15.0%
!! AAAAATACTAGAAAATGAAA+TGG - Chr2:24643583-24643602 None:intergenic 15.0%
!! AAAAGCAAAAAATAAATATC+AGG - Chr2:24642009-24642028 None:intergenic 15.0%
!! AAAATCTAAATCATAACAAA+TGG - Chr2:24649542-24649561 None:intergenic 15.0%
!! AAAGCAAAAAATAAATATCA+GGG - Chr2:24642008-24642027 None:intergenic 15.0%
!! AAATAACAGAGAATTAAATA+GGG - Chr2:24641676-24641695 None:intergenic 15.0%
!! AAGAAAATATCATTATAACA+TGG - Chr2:24644106-24644125 None:intergenic 15.0%
!! AATAATAAAAGCTCATTTAT+TGG + Chr2:24643072-24643091 MsG0280008041.01.T01:intron 15.0%
!! AATAATAATCGAAAATGAAA+TGG - Chr2:24641216-24641235 None:intergenic 15.0%
!! ATATAATATAAGATTTACTC+AGG - Chr2:24644495-24644514 None:intergenic 15.0%
!! GAAAAAGAAATAAAAAAAGA+AGG + Chr2:24650383-24650402 MsG0280008041.01.T01:exon 15.0%
!! TAAATAACAGAGAATTAAAT+AGG - Chr2:24641677-24641696 None:intergenic 15.0%
!! TAAATCTAAATCATAACAAA+TGG - Chr2:24645444-24645463 None:intergenic 15.0%
!! TAAATTAAATTAAGAATAGC+AGG - Chr2:24644376-24644395 None:intergenic 15.0%
!! TAAATTAAATTAAGTATAGC+AGG - Chr2:24646483-24646502 None:intergenic 15.0%
!! TTTATTATTCAATGCATTAA+AGG - Chr2:24643061-24643080 None:intergenic 15.0%
!!! AAAATATATTTTTTGCTATG+TGG - Chr2:24639747-24639766 None:intergenic 15.0%
!!! AAATATATTTTTTGCTATGT+GGG - Chr2:24639746-24639765 None:intergenic 15.0%
!!! AATATAATTTTTATTTTGGC+GGG + Chr2:24643415-24643434 MsG0280008041.01.T01:intron 15.0%
!!! AGGTTATGATTATTTTAATA+TGG - Chr2:24641382-24641401 None:intergenic 15.0%
!!! ATACATTTTTTGTTTTTCTT+TGG + Chr2:24642069-24642088 MsG0280008041.01.T01:intron 15.0%
!!! ATGTTATGGTTATTTTAATA+TGG - Chr2:24641797-24641816 None:intergenic 15.0%
!!! TATTAGTTTATTAATGATGA+TGG - Chr2:24645947-24645966 None:intergenic 15.0%
!!! TATTCTTTTGTTATGTTTTT+TGG + Chr2:24641314-24641333 MsG0280008041.01.T01:intron 15.0%
!!! TCAATTTTTTTAGGAAATTA+GGG + Chr2:24637418-24637437 MsG0280008041.01.T01:intron 15.0%
!!! TGTTATAATGATATTTTCTT+TGG + Chr2:24644106-24644125 MsG0280008041.01.T01:intron 15.0%
!!! TTCAATTTTTTTAGGAAATT+AGG + Chr2:24637417-24637436 MsG0280008041.01.T01:intron 15.0%
!!! TTTCTTTTGTTATGTTTTTT+TGG + Chr2:24645176-24645195 MsG0280008041.01.T01:intron 15.0%
!!! TTTTCTTCTTCAATTTTTTT+AGG + Chr2:24637409-24637428 MsG0280008041.01.T01:intron 15.0%
!!! TTTTTATTGGTTTGTTTTAA+AGG + Chr2:24644403-24644422 MsG0280008041.01.T01:intron 15.0%
!!! TTTTTGATGCTTTTTTTTAA+AGG + Chr2:24639442-24639461 MsG0280008041.01.T01:intron 15.0%
!! AAAAAAAAAAAGACATGCAA+AGG - Chr2:24649778-24649797 None:intergenic 20.0%
!! AAAATATTTAGTGTGATTGA+GGG - Chr2:24638332-24638351 None:intergenic 20.0%
!! AAATAAGAAACAACATGTTA+TGG - Chr2:24641811-24641830 None:intergenic 20.0%
!! AACAATAAAATATGCAAAGA+AGG - Chr2:24642120-24642139 None:intergenic 20.0%
!! AAGAACATATCATTATAACA+TGG - Chr2:24642520-24642539 None:intergenic 20.0%
!! AATATCTAAATCAGGAAAAA+TGG - Chr2:24644155-24644174 None:intergenic 20.0%
!! AATTAAACACTCAAATCTTT+AGG + Chr2:24638618-24638637 MsG0280008041.01.T01:intron 20.0%
!! AGCAATATAAACATAACAAA+TGG - Chr2:24645086-24645105 None:intergenic 20.0%
!! ATATCTAAATCATGACAAAA+TGG - Chr2:24638944-24638963 None:intergenic 20.0%
!! ATGTTCAATAAATAACCAAT+AGG - Chr2:24643345-24643364 None:intergenic 20.0%
!! ATTAAAATAATCATAACCTG+TGG + Chr2:24641383-24641402 MsG0280008041.01.T01:intron 20.0%
!! ATTAAACACTCAAATCTTTA+GGG + Chr2:24638619-24638638 MsG0280008041.01.T01:intron 20.0%
!! ATTAAACACTCAAATCTTTA+TGG + Chr2:24638619-24638638 MsG0280008041.01.T01:intron 20.0%
!! CAAAAAAATAAGAAATGCAA+AGG - Chr2:24645689-24645708 None:intergenic 20.0%
!! CATACATTCATAATTGATTA+AGG + Chr2:24637730-24637749 MsG0280008041.01.T01:intron 20.0%
!! GTATCAATTAAATTATTGCT+AGG + Chr2:24637831-24637850 MsG0280008041.01.T01:intron 20.0%
!! TAAAATTAAGGACCATATTA+GGG + Chr2:24641012-24641031 MsG0280008041.01.T01:intron 20.0%
!! TAAATATCAGGGAATTATAT+AGG - Chr2:24641997-24642016 None:intergenic 20.0%
!! TAAGTCAAAAACAATCTTAT+GGG - Chr2:24642870-24642889 None:intergenic 20.0%
!! TATGGTTGAAAGTTAAAAAA+AGG - Chr2:24641364-24641383 None:intergenic 20.0%
!! TCAAAATTACCTTTAATAAC+AGG - Chr2:24640972-24640991 None:intergenic 20.0%
!! TGTATTCTATTAGTAAAAGT+CGG - Chr2:24640377-24640396 None:intergenic 20.0%
!! TGTTATAATGATATGTTCTT+TGG + Chr2:24642520-24642539 MsG0280008041.01.T01:intron 20.0%
!! TTAAGATTATATAATCATGC+CGG - Chr2:24650611-24650630 None:intergenic 20.0%
!! TTCTTCAATTTATGAAATCA+GGG + Chr2:24637517-24637536 MsG0280008041.01.T01:intron 20.0%
!!! AAATGATTTTTTTTTGTGTC+TGG + Chr2:24640918-24640937 MsG0280008041.01.T01:intron 20.0%
!!! AAATTTTGCTTTAATATGGA+AGG - Chr2:24639801-24639820 None:intergenic 20.0%
!!! AATGATTTTTTTTTGTGTCT+GGG + Chr2:24640919-24640938 MsG0280008041.01.T01:intron 20.0%
!!! AATTTAGTTTAAGTCTGTTT+CGG + Chr2:24638015-24638034 MsG0280008041.01.T01:intron 20.0%
!!! AATTTTGCTTTAATATGGAA+GGG - Chr2:24639800-24639819 None:intergenic 20.0%
!!! ACTTACTTTCTTTTTCTTTA+AGG - Chr2:24646057-24646076 None:intergenic 20.0%
!!! AGAAAAAAATAATGGAGAAT+TGG + Chr2:24640756-24640775 MsG0280008041.01.T01:intron 20.0%
!!! AGAGAAATTTTGCTTTAATA+TGG - Chr2:24639805-24639824 None:intergenic 20.0%
!!! AGATTGCATTTTCATAAAAT+AGG - Chr2:24639006-24639025 None:intergenic 20.0%
!!! AGGTTATGGTTATTTTAATA+TGG - Chr2:24644902-24644921 None:intergenic 20.0%
!!! ATATTGCATTTTCAAAAAAC+AGG - Chr2:24648320-24648339 None:intergenic 20.0%
!!! ATATTGCATTTTCATAAAAC+AGG - Chr2:24642624-24642643 None:intergenic 20.0%
!!! CAACAAAAAATACTGTTTTT+TGG - Chr2:24640946-24640965 None:intergenic 20.0%
!!! GAAAAAAATAATGGAGAATT+GGG + Chr2:24640757-24640776 MsG0280008041.01.T01:intron 20.0%
!!! TAATATATGTTTGTTTTTGG+CGG + Chr2:24644612-24644631 MsG0280008041.01.T01:intron 20.0%
!!! TAATATGGTCCTTAATTTTA+GGG - Chr2:24641012-24641031 None:intergenic 20.0%
!!! TATAATGATATTTTCTTTGG+AGG + Chr2:24644109-24644128 MsG0280008041.01.T01:intron 20.0%
!!! TTATTAAAGGTAATTTTGAG+AGG + Chr2:24640973-24640992 MsG0280008041.01.T01:intron 20.0%
!!! TTTCTTCTGTTATGATTTTT+TGG + Chr2:24643628-24643647 MsG0280008041.01.T01:intron 20.0%
!!! TTTCTTTTGTTATGGTTTTT+TGG + Chr2:24644818-24644837 MsG0280008041.01.T01:intron 20.0%
!!! TTTTTGTCTTTCTTTTGTTA+TGG + Chr2:24644810-24644829 MsG0280008041.01.T01:intron 20.0%
! AAAATTAAGGACCATATTAG+GGG + Chr2:24641013-24641032 MsG0280008041.01.T01:intron 25.0%
! AACATTGAGAGTAAAACTTA+CGG - Chr2:24641482-24641501 None:intergenic 25.0%
! AATATCTAAATCAGGACAAA+TGG - Chr2:24646134-24646153 None:intergenic 25.0%
! ACTACCTGTTTATTCATTAA+AGG - Chr2:24645981-24646000 None:intergenic 25.0%
! AGAACAAAGCAAAAATTTCA+AGG + Chr2:24637370-24637389 MsG0280008041.01.T01:five_prime_UTR 25.0%
! ATTAAAATAACCATAACCTG+AGG + Chr2:24644903-24644922 MsG0280008041.01.T01:intron 25.0%
! ATTAAAATAACCATAACCTG+TGG + Chr2:24644903-24644922 MsG0280008041.01.T01:intron 25.0%
! CAATAAATAACCAATAGTGT+TGG - Chr2:24643340-24643359 None:intergenic 25.0%
! CAATTGATTAATGAAAGTGA+AGG - Chr2:24639894-24639913 None:intergenic 25.0%
! CCAAATCACTCAAAAAAAAA+GGG - Chr2:24638279-24638298 None:intergenic 25.0%
! CGTAAAATCATAAGATCTTA+CGG - Chr2:24648397-24648416 None:intergenic 25.0%
! CTAAAATTAAGGACCATATT+AGG + Chr2:24641011-24641030 MsG0280008041.01.T01:intron 25.0%
! CTAAATTTCTCAAAATCTCA+CGG - Chr2:24638694-24638713 None:intergenic 25.0%
! CTAAGTCAAAAACAATCTTA+TGG - Chr2:24642871-24642890 None:intergenic 25.0%
! CTTATATTCATCCATGTTAT+AGG + Chr2:24637800-24637819 MsG0280008041.01.T01:intron 25.0%
! GAAAATATTTAGTGTGATTG+AGG - Chr2:24638333-24638352 None:intergenic 25.0%
! GTTCTTCAATTTATGAAATC+AGG + Chr2:24637516-24637535 MsG0280008041.01.T01:intron 25.0%
! TAAAAAAAACTTCCCCAAAA+AGG - Chr2:24642187-24642206 None:intergenic 25.0%
! TAACAAAATATGGTGTTTAC+TGG + Chr2:24640636-24640655 MsG0280008041.01.T01:intron 25.0%
! TAAGATTATATAATCATGCC+GGG - Chr2:24650610-24650629 None:intergenic 25.0%
! TAATAAAGGTGAAAAAGAGA+AGG + Chr2:24640792-24640811 MsG0280008041.01.T01:intron 25.0%
! TAATGAATAAACAGGTAGTA+CGG + Chr2:24645982-24646001 MsG0280008041.01.T01:intron 25.0%
! TATTATTAAGGTCCATACTA+GGG - Chr2:24639653-24639672 None:intergenic 25.0%
! TATTGAATTGCAAAATCTCA+CGG + Chr2:24642444-24642463 MsG0280008041.01.T01:CDS 25.0%
! TCATAAAATAGGAAAGCAAA+AGG - Chr2:24638995-24639014 None:intergenic 25.0%
! TCCAAATCACTCAAAAAAAA+AGG - Chr2:24638280-24638299 None:intergenic 25.0%
! TGGGAAGAAGAAAAAAATAA+TGG + Chr2:24640748-24640767 MsG0280008041.01.T01:intron 25.0%
! TGTAATTTATGTAGTGCATT+AGG - Chr2:24650117-24650136 None:intergenic 25.0%
! TTGAATTTCAACATCCATAT+GGG - Chr2:24642916-24642935 None:intergenic 25.0%
! TTGTTGAAACCTGTTATTAA+AGG + Chr2:24640960-24640979 MsG0280008041.01.T01:intron 25.0%
! TTTATTATTCACTGCATGAA+AGG - Chr2:24644254-24644273 None:intergenic 25.0%
! TTTGAATTTCAACATCCATA+TGG - Chr2:24642917-24642936 None:intergenic 25.0%
! TTTGAGAAATTGATTGTGTT+CGG + Chr2:24638590-24638609 MsG0280008041.01.T01:intron 25.0%
!! AAAAAATGCAAAGAAAGTGT+CGG - Chr2:24643705-24643724 None:intergenic 25.0%
!! AATATGGTCCTTAATTTTAG+GGG - Chr2:24641011-24641030 None:intergenic 25.0%
!! AATTACTCTTAACCTTTTTG+GGG + Chr2:24645739-24645758 MsG0280008041.01.T01:intron 25.0%
!! ACACTCAAATCTTTATGTTT+TGG + Chr2:24645810-24645829 MsG0280008041.01.T01:intron 25.0%
!! ACTCAAATCTTTATGTTTTG+GGG + Chr2:24645812-24645831 MsG0280008041.01.T01:intron 25.0%
!! AGAATTACTCTAACCTTTTT+GGG + Chr2:24642171-24642190 MsG0280008041.01.T01:intron 25.0%
!! AGAATTACTCTTAACCTTTT+TGG + Chr2:24645737-24645756 MsG0280008041.01.T01:intron 25.0%
!! AGGGTTTAAAACCTTTAATT+GGG + Chr2:24638043-24638062 MsG0280008041.01.T01:intron 25.0%
!! ATTTAGTTTAAGTCTGTTTC+GGG + Chr2:24638016-24638035 MsG0280008041.01.T01:intron 25.0%
!! CACTCAAATCTTTATGTTTT+GGG + Chr2:24645811-24645830 MsG0280008041.01.T01:intron 25.0%
!! CTAATATGGTCCTTAATTTT+AGG - Chr2:24641013-24641032 None:intergenic 25.0%
!! GAATTACTCTTAACCTTTTT+GGG + Chr2:24645738-24645757 MsG0280008041.01.T01:intron 25.0%
!! TAGGGTTTAAAACCTTTAAT+TGG + Chr2:24638042-24638061 MsG0280008041.01.T01:intron 25.0%
!! TTAAAAAAAGAGAGTACACT+TGG - Chr2:24646558-24646577 None:intergenic 25.0%
!!! AATATATGTTTGTTTTTGGC+GGG + Chr2:24644613-24644632 MsG0280008041.01.T01:intron 25.0%
!!! ATTTTAATAGCCAACACTAT+TGG + Chr2:24643327-24643346 MsG0280008041.01.T01:intron 25.0%
!!! ATTTTTTGTGTTTACTGGAA+GGG + Chr2:24640864-24640883 MsG0280008041.01.T01:intron 25.0%
!!! GCTTTTTCAATATCTAAATC+AGG - Chr2:24644163-24644182 None:intergenic 25.0%
!!! TATGGATTTTTTGTGTTTAC+TGG + Chr2:24640859-24640878 MsG0280008041.01.T01:intron 25.0%
!!! TATTCAATTATTTCTAGCCT+AGG + Chr2:24637684-24637703 MsG0280008041.01.T01:intron 25.0%
!!! TGGTTGTTTGTTTTTAATGT+AGG + Chr2:24640595-24640614 MsG0280008041.01.T01:intron 25.0%
!!! TGTCTTCTGTTAAGTTTTTT+CGG + Chr2:24642034-24642053 MsG0280008041.01.T01:intron 25.0%
!!! TGTCTTCTGTTATGTTTTTT+TGG + Chr2:24645606-24645625 MsG0280008041.01.T01:intron 25.0%
!!! TTATTCTTGCTATTTGTTCA+AGG + Chr2:24645530-24645549 MsG0280008041.01.T01:intron 25.0%
!!! TTTATTTTTCACTGCATGAA+AGG - Chr2:24639298-24639317 None:intergenic 25.0%
!!! TTTTTTGCTTTCCAGTTTTA+TGG + Chr2:24641565-24641584 MsG0280008041.01.T01:intron 25.0%
AAAAAAAAGCTTCCCCAAAA+AGG - Chr2:24638564-24638583 None:intergenic 30.0%
AAAAAAGAAGCCCCAATTAA+AGG - Chr2:24638057-24638076 None:intergenic 30.0%
AAACAATCTTATGGGTCAAA+AGG - Chr2:24642862-24642881 None:intergenic 30.0%
AAAGAAAGAGAAGAGAAAGT+TGG + Chr2:24650296-24650315 MsG0280008041.01.T01:CDS 30.0%
AACATCTAAATCAGGACAAA+TGG - Chr2:24642569-24642588 None:intergenic 30.0%
AACATGGCAATAATCACAAT+AGG - Chr2:24637865-24637884 None:intergenic 30.0%
AAGAGTCGTATCATAACAAA+TGG - Chr2:24641547-24641566 None:intergenic 30.0%
AATCAATCATGATTCATGAG+AGG - Chr2:24641909-24641928 None:intergenic 30.0%
AATGACATTCAACATCCATA+TGG - Chr2:24646368-24646387 None:intergenic 30.0%
ACACTCAAATCTTTATGGTT+TGG + Chr2:24638624-24638643 MsG0280008041.01.T01:intron 30.0%
ACATAACCAACTTATATGCA+TGG - Chr2:24643523-24643542 None:intergenic 30.0%
ACTAGCTGTTTATTCTTCAA+AGG - Chr2:24638796-24638815 None:intergenic 30.0%
ACTCAAATCTTTATGGTTTC+GGG + Chr2:24643839-24643858 MsG0280008041.01.T01:intron 30.0%
ACTCAAATCTTTATGGTTTG+GGG + Chr2:24638626-24638645 MsG0280008041.01.T01:intron 30.0%
ACTGTCTGTTTATTCATCAA+AGG - Chr2:24644002-24644021 None:intergenic 30.0%
AGAAGCTGTTTATTCATCAA+AGG - Chr2:24642413-24642432 None:intergenic 30.0%
AGAATTGTATCTTCTTCACA+TGG - Chr2:24646167-24646186 None:intergenic 30.0%
AGTATGGACCTTAATAATAG+AGG + Chr2:24639654-24639673 MsG0280008041.01.T01:intron 30.0%
ATCAAAAAATCGTCAATCGT+AGG - Chr2:24643463-24643482 None:intergenic 30.0%
ATGACATTCAACATCCATAT+GGG - Chr2:24639265-24639284 None:intergenic 30.0%
ATGATATTCAGTGTGATTGA+GGG - Chr2:24642357-24642376 None:intergenic 30.0%
ATTATTAAGGTCCATACTAG+GGG - Chr2:24639652-24639671 None:intergenic 30.0%
CAACCAAAAATACTGTTTCA+TGG + Chr2:24639719-24639738 MsG0280008041.01.T01:intron 30.0%
CACTCAAATCTTTATGGTTT+CGG + Chr2:24638625-24638644 MsG0280008041.01.T01:intron 30.0%
CACTCAAATCTTTATGGTTT+GGG + Chr2:24638625-24638644 MsG0280008041.01.T01:intron 30.0%
CAGAAGAAAGACAAAAATGA+AGG - Chr2:24643617-24643636 None:intergenic 30.0%
CATTTCACTATGAGTAAAAG+TGG - Chr2:24640003-24640022 None:intergenic 30.0%
CCAGAAAACATATTACAACA+TGG - Chr2:24646088-24646107 None:intergenic 30.0%
CTACAGTCAATATCTAAATC+AGG - Chr2:24646142-24646161 None:intergenic 30.0%
CTATTATTAAGGTCCATACT+AGG - Chr2:24639654-24639673 None:intergenic 30.0%
CTTGCCTTTAATGAATAAAC+AGG + Chr2:24645974-24645993 MsG0280008041.01.T01:intron 30.0%
GAAAATTTCTTTGACCCATA+TGG + Chr2:24642899-24642918 MsG0280008041.01.T01:intron 30.0%
GAATTTAACGAGTTTCTATG+CGG + Chr2:24640034-24640053 MsG0280008041.01.T01:intron 30.0%
GACAAATTAGCTAATCCTAT+TGG + Chr2:24646639-24646658 MsG0280008041.01.T01:intron 30.0%
GATAATATTCAGTGTGATTG+AGG - Chr2:24638738-24638757 None:intergenic 30.0%
GATCCAAGCTTAACAAAATA+TGG + Chr2:24640626-24640645 MsG0280008041.01.T01:intron 30.0%
GGAAGATCATAATTTCACTT+AGG + Chr2:24640349-24640368 MsG0280008041.01.T01:intron 30.0%
GGTTACGTTTATATTGCTAT+TGG + Chr2:24641629-24641648 MsG0280008041.01.T01:intron 30.0%
GTAAATAACATTGACACTCA+TGG + Chr2:24640518-24640537 MsG0280008041.01.T01:intron 30.0%
GTATCTTCATTTCTCATGTA+TGG + Chr2:24640575-24640594 MsG0280008041.01.T01:intron 30.0%
TAAAAAAAGCTTCCCCAAAA+AGG - Chr2:24645754-24645773 None:intergenic 30.0%
TAAAAAATGCTTCCCCAAAA+AGG - Chr2:24649843-24649862 None:intergenic 30.0%
TACATATATGCAATAAGCAC+TGG - Chr2:24650091-24650110 None:intergenic 30.0%
TACTTCTCTTTCCTATAACA+TGG - Chr2:24637814-24637833 None:intergenic 30.0%
TAGTCAAGTTCTTATCCAAA+CGG + Chr2:24640495-24640514 MsG0280008041.01.T01:intron 30.0%
TATGACATTCAACATCCATA+TGG - Chr2:24639266-24639285 None:intergenic 30.0%
TATGATTTCATTGACCCTTA+TGG + Chr2:24646419-24646438 MsG0280008041.01.T01:intron 30.0%
TATGATTTCATTGACCTTTG+TGG + Chr2:24639356-24639375 MsG0280008041.01.T01:intron 30.0%
TATGATTTCGTTGAACCATA+TGG + Chr2:24643011-24643030 MsG0280008041.01.T01:intron 30.0%
TCAAAATAACCTTCAATAGC+AGG + Chr2:24639693-24639712 MsG0280008041.01.T01:intron 30.0%
TGAAGAATAAACAGCTAGTA+CGG + Chr2:24638797-24638816 MsG0280008041.01.T01:intron 30.0%
TGATGAATAAACAGACAGTA+CGG + Chr2:24644003-24644022 MsG0280008041.01.T01:intron 30.0%
TGATGAATAAACAGCTTCTT+CGG + Chr2:24642414-24642433 MsG0280008041.01.T01:intron 30.0%
TGTTACTGTTATTATGCTTG+TGG + Chr2:24640222-24640241 MsG0280008041.01.T01:intron 30.0%
TGTTGATATGCATATAAGCA+TGG + Chr2:24639036-24639055 MsG0280008041.01.T01:intron 30.0%
TTACACATTCAACATCCATA+TGG - Chr2:24643029-24643048 None:intergenic 30.0%
TTGACAATTCACGTTAAACA+TGG - Chr2:24637881-24637900 None:intergenic 30.0%
TTGACATTCAACATCCATAT+GGG - Chr2:24648586-24648605 None:intergenic 30.0%
TTGCAGTGATATATGTTCTT+TGG + Chr2:24638895-24638914 MsG0280008041.01.T01:intron 30.0%
TTGTTGATATGCACATAAGT+TGG + Chr2:24641608-24641627 MsG0280008041.01.T01:intron 30.0%
TTTGACATTCAACATCCATA+TGG - Chr2:24648587-24648606 None:intergenic 30.0%
TTTGATACCAAAACAATCCT+AGG + Chr2:24641110-24641129 MsG0280008041.01.T01:intron 30.0%
TTTGATCAAAAAGAAACCAC+AGG - Chr2:24641402-24641421 None:intergenic 30.0%
! AAAATATGCAAAGAAGGTGT+TGG - Chr2:24642114-24642133 None:intergenic 30.0%
! AATAAGAAATGCAAAGGTGT+AGG - Chr2:24645683-24645702 None:intergenic 30.0%
! ACACCATATTTTGTTAAGCT+TGG - Chr2:24640632-24640651 None:intergenic 30.0%
! AGAACTACTCTAACCTTTTT+GGG + Chr2:24638548-24638567 MsG0280008041.01.T01:intron 30.0%
! CAACTTTTCAACATCCATAA+GGG - Chr2:24643136-24643155 None:intergenic 30.0%
! CAGAATTACTCTAACCTTTT+TGG + Chr2:24642170-24642189 MsG0280008041.01.T01:intron 30.0%
! CATCTTTTCAACATCCATAA+GGG - Chr2:24644329-24644348 None:intergenic 30.0%
! CCATGTTGTAATATGTTTTC+TGG + Chr2:24646085-24646104 MsG0280008041.01.T01:intron 30.0%
! CTAAATATTTTCAACCATGC+TGG + Chr2:24638341-24638360 MsG0280008041.01.T01:intron 30.0%
! GAATTACTCTAACCTTTTTG+GGG + Chr2:24642172-24642191 MsG0280008041.01.T01:intron 30.0%
! GGGTTTAAAACCTTTAATTG+GGG + Chr2:24638044-24638063 MsG0280008041.01.T01:intron 30.0%
! GTGAAAAGTGCATAAATCAT+TGG + Chr2:24640550-24640569 MsG0280008041.01.T01:intron 30.0%
! TAAAGCTTTTGCTTCATTTG+AGG + Chr2:24640667-24640686 MsG0280008041.01.T01:intron 30.0%
! TAGAACTACTCTAACCTTTT+TGG + Chr2:24638547-24638566 MsG0280008041.01.T01:intron 30.0%
! TTTAAAGAAGAGAGTACACT+TGG - Chr2:24644455-24644474 None:intergenic 30.0%
! TTTAGTTTAAGTCTGTTTCG+GGG + Chr2:24638017-24638036 MsG0280008041.01.T01:intron 30.0%
!! AAATATGCAAAGAAGGTGTT+GGG - Chr2:24642113-24642132 None:intergenic 30.0%
!! AGAAATTACAATTGGTGATG+CGG + Chr2:24650257-24650276 MsG0280008041.01.T01:CDS 30.0%
!! CTCAAATCTTTATGTTTTGG+GGG + Chr2:24645813-24645832 MsG0280008041.01.T01:intron 30.0%
!! CTTTTGTTATGTTTTTTGGC+TGG + Chr2:24641318-24641337 MsG0280008041.01.T01:intron 30.0%
!! GTACAATTCGTTTTTGCTTT+CGG + Chr2:24645490-24645509 MsG0280008041.01.T01:intron 30.0%
!! TACAATTCGTTTTTGCTTTC+GGG + Chr2:24645491-24645510 MsG0280008041.01.T01:intron 30.0%
!! TCAAATCTTTATGTTTTGGG+GGG + Chr2:24645814-24645833 MsG0280008041.01.T01:intron 30.0%
!! TGACTTTTGTTGATTGCTTT+TGG + Chr2:24650545-24650564 MsG0280008041.01.T01:three_prime_UTR 30.0%
!! TTCAAAAAGCACCAATTCAA+AGG - Chr2:24638667-24638686 None:intergenic 30.0%
!! TTTATATTGCTATTGGTTCC+AGG + Chr2:24641636-24641655 MsG0280008041.01.T01:intron 30.0%
!! TTTGCTGATTTACACAGAAA+TGG + Chr2:24650143-24650162 MsG0280008041.01.T01:intron 30.0%
!!! ATATTTTTAAAGTGCAGCAG+CGG + Chr2:24639760-24639779 MsG0280008041.01.T01:intron 30.0%
!!! CATATTTTGGTGATGCTATA+CGG + Chr2:24650028-24650047 MsG0280008041.01.T01:intron 30.0%
!!! CCCTTTTTTTTTGAGTGATT+TGG + Chr2:24638276-24638295 MsG0280008041.01.T01:intron 30.0%
!!! CTATTGAAGGTTATTTTGAG+AGG - Chr2:24639692-24639711 None:intergenic 30.0%
!!! GATTTTTTGTGTTTACTGGA+AGG + Chr2:24640863-24640882 MsG0280008041.01.T01:intron 30.0%
!!! TCCTTTTTTTTTGGTTGTCA+CGG + Chr2:24640301-24640320 MsG0280008041.01.T01:intron 30.0%
!!! TGTCTTCTGTTGTGTTTTTT+TGG + Chr2:24641712-24641731 MsG0280008041.01.T01:intron 30.0%
!!! TTGGGGCTTCTTTTTTTTAA+AGG + Chr2:24638061-24638080 MsG0280008041.01.T01:intron 30.0%
AAAAAGAAGAAGTTTCTGCG+AGG + Chr2:24650166-24650185 MsG0280008041.01.T01:CDS 35.0%
AAAAATCGTCAATCGTAGGA+TGG - Chr2:24643459-24643478 None:intergenic 35.0%
AAACAAGAAACCACAGGTTA+TGG - Chr2:24645274-24645293 None:intergenic 35.0%
AAACAAGAAACCTCAGGTTA+TGG - Chr2:24644916-24644935 None:intergenic 35.0%
AAACAGACATATGGGTCAAA+AGG - Chr2:24639211-24639230 None:intergenic 35.0%
AAACATTGAACAGCAGTTAC+TGG + Chr2:24641836-24641855 MsG0280008041.01.T01:intron 35.0%
AAACGAATTGTACCTTCACA+TGG - Chr2:24645483-24645502 None:intergenic 35.0%
AAAGGTGAAAAAGAGAAGGA+TGG + Chr2:24640796-24640815 MsG0280008041.01.T01:intron 35.0%
AACATTGAACAGCAGTTACT+GGG + Chr2:24641837-24641856 MsG0280008041.01.T01:intron 35.0%
AAGAAAGAGATAGAGACAGA+GGG + Chr2:24640824-24640843 MsG0280008041.01.T01:intron 35.0%
AAGGCTGCAGAAATTACAAT+TGG + Chr2:24650249-24650268 MsG0280008041.01.T01:CDS 35.0%
ACATAACCAACTTATGTGCA+TGG - Chr2:24641156-24641175 None:intergenic 35.0%
ACCGTGACAACCAAAAAAAA+AGG - Chr2:24640305-24640324 None:intergenic 35.0%
ACGATATTCAGTGTGATTGA+GGG - Chr2:24643946-24643965 None:intergenic 35.0%
ACGGCTGAAAATCTTTGAAT+TGG + Chr2:24638653-24638672 MsG0280008041.01.T01:intron 35.0%
AGCTTGCATTTCCATAAAAC+TGG - Chr2:24641579-24641598 None:intergenic 35.0%
AGTCAAGTTCTTATCCAAAC+GGG + Chr2:24640496-24640515 MsG0280008041.01.T01:intron 35.0%
ATAGAAGAACAAATCTGGTC+TGG - Chr2:24639867-24639886 None:intergenic 35.0%
ATATCCTCCTCGTTAACTTA+AGG - Chr2:24639972-24639991 None:intergenic 35.0%
ATATGGACCTTAAGTTAACG+AGG + Chr2:24639962-24639981 MsG0280008041.01.T01:intron 35.0%
ATCAAAAGATCGTCAATCGT+AGG - Chr2:24644661-24644680 None:intergenic 35.0%
ATTAAAGGAAGCCCCTAATA+TGG - Chr2:24641027-24641046 None:intergenic 35.0%
CAAGTCAAAAATGGGTCAAA+AGG - Chr2:24648540-24648559 None:intergenic 35.0%
CAGGTCAAAAACAGACATAT+GGG - Chr2:24639219-24639238 None:intergenic 35.0%
CGTAAAATCATACGATCTTG+CGG - Chr2:24642735-24642754 None:intergenic 35.0%
CGTATAGCATCACCAAAATA+TGG - Chr2:24650030-24650049 None:intergenic 35.0%
CTACAGTCAACATCTAAATC+AGG - Chr2:24642577-24642596 None:intergenic 35.0%
CTCAAATCTTTATGGTTTCG+GGG + Chr2:24643840-24643859 MsG0280008041.01.T01:intron 35.0%
GAAAATTTCCTTGACCCATA+TGG + Chr2:24648569-24648588 MsG0280008041.01.T01:intron 35.0%
GAAAATTTCGTTGACCCATA+TGG + Chr2:24639248-24639267 MsG0280008041.01.T01:intron 35.0%
GAACATATATCACTGCAACA+TGG - Chr2:24638893-24638912 None:intergenic 35.0%
GAGTGATAGAAGAACAAATC+TGG - Chr2:24639872-24639891 None:intergenic 35.0%
GATGATATTCAGTGTGATTG+AGG - Chr2:24642358-24642377 None:intergenic 35.0%
GGATGAAGAGAGAGAAAAAA+AGG - Chr2:24639844-24639863 None:intergenic 35.0%
GGATGCTGAATAAACTAGAA+TGG + Chr2:24650404-24650423 MsG0280008041.01.T01:three_prime_UTR 35.0%
GTTGGGAGAGATATGATAAA+CGG - Chr2:24642096-24642115 None:intergenic 35.0%
TAAAAACCGAGATCAAACCT+AGG - Chr2:24644695-24644714 None:intergenic 35.0%
TAAGAATAGCAGGCAATTAC+AGG - Chr2:24644366-24644385 None:intergenic 35.0%
TAGAAGAACAAATCTGGTCT+GGG - Chr2:24639866-24639885 None:intergenic 35.0%
TATGATTTCGTTGACCCTTA+TGG + Chr2:24643119-24643138 MsG0280008041.01.T01:intron 35.0%
TCAAAATTGAGATCTCACCT+AGG - Chr2:24641130-24641149 None:intergenic 35.0%
TCAAATCTTTATGGTTTCGG+GGG + Chr2:24643841-24643860 MsG0280008041.01.T01:intron 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + Chr2:24638179-24638198 MsG0280008041.01.T01:intron 35.0%
TGAAATGGAATCAATTTGCC+TGG - Chr2:24643568-24643587 None:intergenic 35.0%
TGAAATTGGGTAAATTTGCC+TGG - Chr2:24644766-24644785 None:intergenic 35.0%
TGACAACCATGCATATAAGT+TGG + Chr2:24643514-24643533 MsG0280008041.01.T01:intron 35.0%
TGCAGCAAGACAAATATAAC+AGG - Chr2:24650441-24650460 None:intergenic 35.0%
TGTAGGAGAGAGATGATTAA+CGG - Chr2:24645666-24645685 None:intergenic 35.0%
TGTGTAGAATGCACATAGTT+TGG + Chr2:24641928-24641947 MsG0280008041.01.T01:intron 35.0%
TTACAACCATGCACATAAGT+TGG + Chr2:24644712-24644731 MsG0280008041.01.T01:intron 35.0%
TTCTTCAACTCACATCACAA+TGG + Chr2:24640082-24640101 MsG0280008041.01.T01:intron 35.0%
TTGACTTAAGAACCATGTGA+AGG + Chr2:24645468-24645487 MsG0280008041.01.T01:intron 35.0%
TTGATCAAACAAGAAACCAC+AGG - Chr2:24645280-24645299 None:intergenic 35.0%
TTGATCAAACAAGAAACCTC+AGG - Chr2:24644922-24644941 None:intergenic 35.0%
TTGGGAGAGATATGATAAAC+GGG - Chr2:24642095-24642114 None:intergenic 35.0%
! AAAAAGACATGCAAAGGTGT+AGG - Chr2:24649772-24649791 None:intergenic 35.0%
! AATAATGGAAACCCCTAGTA+TGG + Chr2:24639638-24639657 MsG0280008041.01.T01:intron 35.0%
! ATGGGTCAACGAAATTTTCA+CGG - Chr2:24639247-24639266 None:intergenic 35.0%
! ATTGCTATTGTTACTAGACC+AGG + Chr2:24643547-24643566 MsG0280008041.01.T01:intron 35.0%
! CAACTTTTCAACATCCACAA+AGG - Chr2:24639373-24639392 None:intergenic 35.0%
! CTCAAATCTTTATGGTTTGG+GGG + Chr2:24638627-24638646 MsG0280008041.01.T01:intron 35.0%
! GAACTACTCTAACCTTTTTG+GGG + Chr2:24638549-24638568 MsG0280008041.01.T01:intron 35.0%
! GCAACTTTTCAACATCCATA+AGG - Chr2:24643137-24643156 None:intergenic 35.0%
! GCATCTTTTCAACATCCATA+AGG - Chr2:24644330-24644349 None:intergenic 35.0%
! GGACCATGAAACAGTATTTT+TGG - Chr2:24639725-24639744 None:intergenic 35.0%
! GGTTACGTTTATCTTGCTAT+TGG + Chr2:24641949-24641968 MsG0280008041.01.T01:intron 35.0%
! GTCAATGTTATTTACCCGTT+TGG - Chr2:24640513-24640532 None:intergenic 35.0%
!! AAAAAAAAGCGTCCCCAAAA+AGG - Chr2:24643778-24643797 None:intergenic 35.0%
!! ACAATGAACAGAAGTTGATG+AGG + Chr2:24641422-24641441 MsG0280008041.01.T01:intron 35.0%
!! ACACTCAAATCTTTAGGGTT+TGG + Chr2:24642246-24642265 MsG0280008041.01.T01:intron 35.0%
!! ACTCAAATCTTTAGGGTTTG+GGG + Chr2:24642248-24642267 MsG0280008041.01.T01:intron 35.0%
!! ATATATGCAATAAGCACTGG+TGG - Chr2:24650088-24650107 None:intergenic 35.0%
!! CACTCAAATCTTTAGGGTTT+GGG + Chr2:24642247-24642266 MsG0280008041.01.T01:intron 35.0%
!! CTTTTGACCCATTTTTGACT+TGG + Chr2:24648538-24648557 MsG0280008041.01.T01:intron 35.0%
!! TTGCTATTTGTTCAAGGACT+TGG + Chr2:24645536-24645555 MsG0280008041.01.T01:intron 35.0%
!! TTTATCTTGCTATTGGTTCC+TGG + Chr2:24641956-24641975 MsG0280008041.01.T01:intron 35.0%
!!! AGGTTATTTTGAGAGGATCA+TGG - Chr2:24639685-24639704 None:intergenic 35.0%
!!! CATTCTTTGTTTTCTGTTCC+CGG + Chr2:24643665-24643684 MsG0280008041.01.T01:intron 35.0%
!!! CTTTATGTTTTGGGGGATTA+CGG + Chr2:24647942-24647961 MsG0280008041.01.T01:intron 35.0%
!!! GGTTATTTTGAGAGGATCAT+GGG - Chr2:24639684-24639703 None:intergenic 35.0%
!!! GTTTTTGCTTTCGGGTTTTA+TGG + Chr2:24645499-24645518 MsG0280008041.01.T01:intron 35.0%
!!! TCGTTGATCTTGTGTTGTTT+TGG + Chr2:24637774-24637793 MsG0280008041.01.T01:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - Chr2:24638180-24638199 None:intergenic 35.0%
!!! TTTATGTTTTGGGGGGATTA+CGG + Chr2:24645821-24645840 MsG0280008041.01.T01:intron 35.0%
AAAGATCGTCAATCGTAGGA+TGG - Chr2:24644657-24644676 None:intergenic 40.0%
AACCATTGAACCACTTGATC+TGG - Chr2:24644046-24644065 None:intergenic 40.0%
AACGATCCTAGGTTTGATCT+CGG + Chr2:24644686-24644705 MsG0280008041.01.T01:intron 40.0%
AATATGGTGTTTACTGGAGC+TGG + Chr2:24640642-24640661 MsG0280008041.01.T01:intron 40.0%
ACAATGAACAGAAGTTGCTG+AGG + Chr2:24644943-24644962 MsG0280008041.01.T01:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + Chr2:24638173-24638192 MsG0280008041.01.T01:intron 40.0%
ACGGCTGAAAACCTTTGAAT+TGG + Chr2:24643867-24643886 MsG0280008041.01.T01:intron 40.0%
ACGTAACCAACTTATGTGCA+TGG - Chr2:24641617-24641636 None:intergenic 40.0%
ACTGCGAACCAAGTCAAAAA+TGG - Chr2:24648549-24648568 None:intergenic 40.0%
AGAAAGAGATAGAGACAGAG+GGG + Chr2:24640825-24640844 MsG0280008041.01.T01:intron 40.0%
AGAAGAACAAATCTGGTCTG+GGG - Chr2:24639865-24639884 None:intergenic 40.0%
AGATCAAACCTAGGATCGTT+TGG - Chr2:24644686-24644705 None:intergenic 40.0%
AGATGACATGGCTGTAGATA+AGG + Chr2:24650230-24650249 MsG0280008041.01.T01:CDS 40.0%
AGCAGCTGTGTATCGTTAAA+TGG - Chr2:24639927-24639946 None:intergenic 40.0%
ATCCAAGAAGAAGAAGCAAG+AGG + Chr2:24650191-24650210 MsG0280008041.01.T01:CDS 40.0%
ATGAACAGAAGTTGCTGATG+AGG + Chr2:24644946-24644965 MsG0280008041.01.T01:intron 40.0%
ATGGAAAAGACCCTCCATTA+TGG - Chr2:24650011-24650030 None:intergenic 40.0%
ATGGATGTTGAAAAGTTGCG+CGG + Chr2:24643138-24643157 MsG0280008041.01.T01:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + Chr2:24638174-24638193 MsG0280008041.01.T01:intron 40.0%
CCAGGTCAAAAACAGACATA+TGG - Chr2:24639220-24639239 None:intergenic 40.0%
CGAGCAAATTATCGAAACCT+AGG - Chr2:24637704-24637723 None:intergenic 40.0%
CGGCAAAGACTGATATCAAA+TGG + Chr2:24638817-24638836 MsG0280008041.01.T01:exon 40.0%
CGTACAATACACCAAATGGT+GGG + Chr2:24638205-24638224 MsG0280008041.01.T01:intron 40.0%
CGTGTTAGTTAGAGATCCAA+CGG - Chr2:24637297-24637316 None:intergenic 40.0%
CTCAAAAAAAAAGGGCAACC+CGG - Chr2:24638271-24638290 None:intergenic 40.0%
CTGCGAACCAAGTCAAAAAT+GGG - Chr2:24648548-24648567 None:intergenic 40.0%
GAACAGACACATGAGTCAAA+AGG - Chr2:24638440-24638459 None:intergenic 40.0%
GAAGAAAGAGATAGAGACAG+AGG + Chr2:24640823-24640842 MsG0280008041.01.T01:intron 40.0%
GACGATATTCAGTGTGATTG+AGG - Chr2:24643947-24643966 None:intergenic 40.0%
GATCAAACCTAGGATCGTTT+GGG - Chr2:24644685-24644704 None:intergenic 40.0%
GGCTGTTCAGTTTATGCATT+AGG + Chr2:24641733-24641752 MsG0280008041.01.T01:intron 40.0%
GTAACATTCTTCGTGTAGCT+CGG - Chr2:24640141-24640160 None:intergenic 40.0%
GTAGGAGAGAGATGATTAAC+GGG - Chr2:24645665-24645684 None:intergenic 40.0%
GTCGGTGAGAAATGATTAAC+CGG - Chr2:24643687-24643706 None:intergenic 40.0%
GTTGAAAAGTTGCGCAATGA+GGG + Chr2:24639381-24639400 MsG0280008041.01.T01:intron 40.0%
TAAGTCTGTTTCGGGGTATA+GGG + Chr2:24638024-24638043 MsG0280008041.01.T01:intron 40.0%
TAGGAGAGAGATGATTAACG+GGG - Chr2:24645664-24645683 None:intergenic 40.0%
TATAATCATGCCGGGAAACA+TGG - Chr2:24650602-24650621 None:intergenic 40.0%
TCAAAACCAAGATCTCACCT+AGG - Chr2:24643497-24643516 None:intergenic 40.0%
TCAATCGTAGGATGGTAACA+CGG - Chr2:24643451-24643470 None:intergenic 40.0%
TCACGGTTTGTACATCTTGT+GGG + Chr2:24640318-24640337 MsG0280008041.01.T01:intron 40.0%
TCGAGTACCACATGAAAACA+CGG - Chr2:24637967-24637986 None:intergenic 40.0%
TCGGTGAGAAATGATTAACC+GGG - Chr2:24643686-24643705 None:intergenic 40.0%
TGAAATGGAGTCAATTTGCC+TGG - Chr2:24641201-24641220 None:intergenic 40.0%
TGACAACCATGCACATAAGT+TGG + Chr2:24641147-24641166 MsG0280008041.01.T01:intron 40.0%
TGCAAAATCTCACGGTTCAA+CGG + Chr2:24642452-24642471 MsG0280008041.01.T01:CDS 40.0%
TGGAAAAGACCCTCCATTAT+GGG - Chr2:24650010-24650029 None:intergenic 40.0%
TGGGTGAACCCCTAAAATTA+AGG + Chr2:24641000-24641019 MsG0280008041.01.T01:intron 40.0%
TGGGTGGACCTCTATTATTA+AGG - Chr2:24639665-24639684 None:intergenic 40.0%
TGTTGAAAAGTTGCGCAATG+AGG + Chr2:24639380-24639399 MsG0280008041.01.T01:intron 40.0%
TTAAGTCTGTTTCGGGGTAT+AGG + Chr2:24638023-24638042 MsG0280008041.01.T01:intron 40.0%
TTATCAACCCGTACATGACT+GGG + Chr2:24644990-24645009 MsG0280008041.01.T01:intron 40.0%
TTCAACATCCATATGGGTCA+AGG - Chr2:24639259-24639278 None:intergenic 40.0%
TTTATCAACCCGTACATGAC+TGG + Chr2:24644989-24645008 MsG0280008041.01.T01:intron 40.0%
TTTATGGTTTCGGGGGATTA+CGG + Chr2:24643848-24643867 MsG0280008041.01.T01:intron 40.0%
TTTGATACCCAAACGATCCT+AGG + Chr2:24643477-24643496 MsG0280008041.01.T01:intron 40.0%
! AAATCGACCGTGTTTTCATG+TGG + Chr2:24637957-24637976 MsG0280008041.01.T01:intron 40.0%
! CTTTATGGTTTGGGGGATTA+CGG + Chr2:24638634-24638653 MsG0280008041.01.T01:intron 40.0%
! GATCTCACCTAGGATTGTTT+TGG - Chr2:24641120-24641139 None:intergenic 40.0%
! GGAGGGTCTTTTCCATATTT+TGG + Chr2:24650015-24650034 MsG0280008041.01.T01:intron 40.0%
! TATTTTCAACCATGCTGGAG+CGG + Chr2:24638346-24638365 MsG0280008041.01.T01:intron 40.0%
! TGTCGACAAAATTTTCACCG+CGG - Chr2:24638492-24638511 None:intergenic 40.0%
! TTGCTTTGTTCTTCTTCTCG+AGG - Chr2:24637362-24637381 None:intergenic 40.0%
!! AATTACAATTGGTGATGCGG+AGG + Chr2:24650260-24650279 MsG0280008041.01.T01:CDS 40.0%
!! AGGATCATTTTTCCAAGTCC+AGG - Chr2:24641977-24641996 None:intergenic 40.0%
!! AGGTAATTTTGAGAGGACCA+TGG + Chr2:24640980-24640999 MsG0280008041.01.T01:intron 40.0%
!! CTCAAATCTTTAGGGTTTGG+GGG + Chr2:24642249-24642268 MsG0280008041.01.T01:intron 40.0%
!! GGTAATTTTGAGAGGACCAT+GGG + Chr2:24640981-24641000 MsG0280008041.01.T01:intron 40.0%
!! TAATTTTAGGGGTTCACCCA+TGG - Chr2:24641000-24641019 None:intergenic 40.0%
!! TATTTTGAGAGGATCATGGG+TGG - Chr2:24639681-24639700 None:intergenic 40.0%
!!! ATTTTGGTGATGCTATACGG+TGG + Chr2:24650031-24650050 MsG0280008041.01.T01:intron 40.0%
!!! CCATATGTCTGTTTTTGACC+TGG + Chr2:24639217-24639236 MsG0280008041.01.T01:intron 40.0%
AACGATCCTAGGTGAGATCT+TGG + Chr2:24643488-24643507 MsG0280008041.01.T01:intron 45.0%
AAGCCTTACTCCCATTGAGT+AGG + Chr2:24640414-24640433 MsG0280008041.01.T01:intron 45.0%
ACCACTACACCCTTGAAGAT+TGG - Chr2:24641866-24641885 None:intergenic 45.0%
ACCCTCCATTATGGGTCAAA+AGG - Chr2:24650002-24650021 None:intergenic 45.0%
ACTGGGAAGCCAATCTTCAA+GGG + Chr2:24641854-24641873 MsG0280008041.01.T01:CDS 45.0%
AGAGAAGAGAAAGTTGGACC+AGG + Chr2:24650302-24650321 MsG0280008041.01.T01:CDS 45.0%
AGATCTCACCTAGGATCGTT+TGG - Chr2:24643488-24643507 None:intergenic 45.0%
AGCCTCTTGCTTCTTCTTCT+TGG - Chr2:24650196-24650215 None:intergenic 45.0%
AGCCTTACTCCCATTGAGTA+GGG + Chr2:24640415-24640434 MsG0280008041.01.T01:intron 45.0%
ATGAACAGAAGTTGCTGAGG+AGG + Chr2:24645304-24645323 MsG0280008041.01.T01:intron 45.0%
ATTTCGAGAAGGGGTAACCT+TGG + Chr2:24638093-24638112 MsG0280008041.01.T01:intron 45.0%
CACGATCTAATTCTGAGTGC+CGG - Chr2:24648479-24648498 None:intergenic 45.0%
CAGAACAGACCCTACTCAAT+GGG - Chr2:24640427-24640446 None:intergenic 45.0%
CTGTGAGTGATTTCGAGAAG+GGG + Chr2:24638084-24638103 MsG0280008041.01.T01:intron 45.0%
CTTCTTGCTTGAATCAGCGT+TGG - Chr2:24650364-24650383 None:intergenic 45.0%
GATCTCACCTAGGATCGTTT+GGG - Chr2:24643487-24643506 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + Chr2:24638204-24638223 MsG0280008041.01.T01:intron 45.0%
GCTGATGAGGCACAACTAAA+GGG + Chr2:24644959-24644978 MsG0280008041.01.T01:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + Chr2:24638201-24638220 MsG0280008041.01.T01:intron 45.0%
GCTGTGAGTGATTTCGAGAA+GGG + Chr2:24638083-24638102 MsG0280008041.01.T01:intron 45.0%
GGTGCAAAAATCGTTGGAGA+GGG + Chr2:24639131-24639150 MsG0280008041.01.T01:intron 45.0%
GGTGCGAAAATCATTGGAGA+GGG + Chr2:24638367-24638386 MsG0280008041.01.T01:intron 45.0%
GGTTCGAAAATCGTTGGAGA+GGG + Chr2:24642783-24642802 MsG0280008041.01.T01:intron 45.0%
GGTTGATTGGACGGATCAAT+TGG + Chr2:24646012-24646031 MsG0280008041.01.T01:CDS 45.0%
GGTTTGTACATCTTGTGGGA+AGG + Chr2:24640322-24640341 MsG0280008041.01.T01:intron 45.0%
GTCACGGTTTGTACATCTTG+TGG + Chr2:24640317-24640336 MsG0280008041.01.T01:intron 45.0%
GTTGTTGTCATGTGACCGTA+AGG + Chr2:24638129-24638148 MsG0280008041.01.T01:intron 45.0%
TACGATCTAACTCTGAGTGC+CGG - Chr2:24638401-24638420 None:intergenic 45.0%
TACTGGGAAGCCAATCTTCA+AGG + Chr2:24641853-24641872 MsG0280008041.01.T01:CDS 45.0%
TCATGTGTCTGTTCTTGACC+TGG + Chr2:24638446-24638465 MsG0280008041.01.T01:intron 45.0%
TCGTTAGAGGAAACTCGTGA+AGG - Chr2:24637335-24637354 None:intergenic 45.0%
TGATGAGGAGCCAAGAGTAA+AGG + Chr2:24641437-24641456 MsG0280008041.01.T01:CDS 45.0%
TGCTGATGAGGCACAACTAA+AGG + Chr2:24644958-24644977 MsG0280008041.01.T01:intron 45.0%
TGCTGCAGATGAAGATGACA+TGG + Chr2:24650218-24650237 MsG0280008041.01.T01:CDS 45.0%
TGGACCTTAAGTTAACGAGG+AGG + Chr2:24639965-24639984 MsG0280008041.01.T01:intron 45.0%
TGGTTGCAACCTGCTATTGA+AGG - Chr2:24639705-24639724 None:intergenic 45.0%
TTCTCGAGGAAACTCGTTAG+AGG - Chr2:24637348-24637367 None:intergenic 45.0%
! AAAATTTTCACCGCGGACCA+AGG - Chr2:24638485-24638504 None:intergenic 45.0%
! ATCTTCAAGGGTGTAGTGGT+TGG + Chr2:24641866-24641885 MsG0280008041.01.T01:CDS 45.0%
! CAACGATTTTCGAACCGCTT+CGG - Chr2:24642779-24642798 None:intergenic 45.0%
! CGAAATTTTCACGGCAAACC+AGG - Chr2:24639238-24639257 None:intergenic 45.0%
! TACATCTTGTGGGAAGGTGT+TGG + Chr2:24640328-24640347 MsG0280008041.01.T01:intron 45.0%
! TCTTCAAGGGTGTAGTGGTT+GGG + Chr2:24641867-24641886 MsG0280008041.01.T01:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr2:24638169-24638188 None:intergenic 45.0%
! TTTTGTCCAGCCATGTTTCC+CGG + Chr2:24650589-24650608 MsG0280008041.01.T01:three_prime_UTR 45.0%
!! AGAGGGGAGCTCTAAACTTA+TGG + Chr2:24640841-24640860 MsG0280008041.01.T01:intron 45.0%
!! CTTGCTGTTGTTACTAGACC+AGG + Chr2:24641180-24641199 MsG0280008041.01.T01:intron 45.0%
!! CTTTAGGGTTTGGGGGATTA+CGG + Chr2:24642256-24642275 MsG0280008041.01.T01:intron 45.0%
!! GCCTTTTGACCCATAATGGA+GGG + Chr2:24649998-24650017 MsG0280008041.01.T01:intron 45.0%
!! TTGCTATTGGTTCCAGGACT+TGG + Chr2:24641642-24641661 MsG0280008041.01.T01:intron 45.0%
!! TTGCTATTGGTTCCTGGACT+TGG + Chr2:24641962-24641981 MsG0280008041.01.T01:intron 45.0%
!!! AGGGTCATTTTTCCAAGTCC+TGG - Chr2:24641657-24641676 None:intergenic 45.0%
!! ATATAGTATTATATTATTAA+AGG - Chr2:24641042-24641061 None:intergenic 5.0%
!! TAATTAACAAAAATATTTAA+TGG - Chr2:24643394-24643413 None:intergenic 5.0%
!!! TTCTTAATTTTTTTTTATAA+AGG + Chr2:24643187-24643206 MsG0280008041.01.T01:intron 5.0%
AACAGACAGTACGGCGAGAA+TGG + Chr2:24644012-24644031 MsG0280008041.01.T01:intron 50.0%
AACAGGTAGTACGGCGAGAA+TGG + Chr2:24645991-24646010 MsG0280008041.01.T01:intron 50.0%
ACCTCTACGGCCTTTACTCT+TGG - Chr2:24641450-24641469 None:intergenic 50.0%
ACGATCCTTCCCAACCTCTA+CGG - Chr2:24641463-24641482 None:intergenic 50.0%
AGAAAGTTGGACCAGGAGGT+TGG + Chr2:24650309-24650328 MsG0280008041.01.T01:CDS 50.0%
AGAGGCAAGTGGTGTAGAGA+AGG + Chr2:24640703-24640722 MsG0280008041.01.T01:intron 50.0%
AGAGTAAAGGCCGTAGAGGT+TGG + Chr2:24641450-24641469 MsG0280008041.01.T01:CDS 50.0%
AGTCAAAAGGCCGAGAGAGA+CGG - Chr2:24638427-24638446 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - Chr2:24638113-24638132 None:intergenic 50.0%
CACTTGCCTCTTGAGATAGC+TGG - Chr2:24640694-24640713 None:intergenic 50.0%
CAGAGCGGTGCAAAAATCGT+TGG + Chr2:24639125-24639144 MsG0280008041.01.T01:intron 50.0%
CAGCTATCTCAAGAGGCAAG+TGG + Chr2:24640692-24640711 MsG0280008041.01.T01:intron 50.0%
CCAGAACAGACCCTACTCAA+TGG - Chr2:24640428-24640447 None:intergenic 50.0%
CCATTATGGGTCAAAAGGCG+TGG - Chr2:24649997-24650016 None:intergenic 50.0%
CCATTGAGTAGGGTCTGTTC+TGG + Chr2:24640425-24640444 MsG0280008041.01.T01:intron 50.0%
CGAAGCGGTTCGAAAATCGT+TGG + Chr2:24642777-24642796 MsG0280008041.01.T01:intron 50.0%
CGCCAGATCAAGTGGTTCAA+TGG + Chr2:24644041-24644060 MsG0280008041.01.T01:CDS 50.0%
CGGTGCAAAAATCGTTGGAG+AGG + Chr2:24639130-24639149 MsG0280008041.01.T01:intron 50.0%
CGGTGCGAAAATCATTGGAG+AGG + Chr2:24638366-24638385 MsG0280008041.01.T01:intron 50.0%
CGGTTCGAAAATCGTTGGAG+AGG + Chr2:24642782-24642801 MsG0280008041.01.T01:intron 50.0%
GAAGAGAAAGTTGGACCAGG+AGG + Chr2:24650305-24650324 MsG0280008041.01.T01:CDS 50.0%
GACCCTACTCAATGGGAGTA+AGG - Chr2:24640420-24640439 None:intergenic 50.0%
GACTTGAACCCGTGACCTTA+CGG - Chr2:24638147-24638166 None:intergenic 50.0%
GAGTAAAGGCCGTAGAGGTT+GGG + Chr2:24641451-24641470 MsG0280008041.01.T01:CDS 50.0%
GATCGTAAGACCGTCTCTCT+CGG + Chr2:24638414-24638433 MsG0280008041.01.T01:intron 50.0%
GATGAGGCACAACTAAAGGG+CGG + Chr2:24644962-24644981 MsG0280008041.01.T01:intron 50.0%
GCAAAAATCGTTGGAGAGGG+CGG + Chr2:24639134-24639153 MsG0280008041.01.T01:intron 50.0%
GCAAGGTGTGGGAGGTTAAT+GGG + Chr2:24640729-24640748 MsG0280008041.01.T01:intron 50.0%
GGAGGTTGGAGTTCATGACA+AGG + Chr2:24650323-24650342 MsG0280008041.01.T01:CDS 50.0%
GGCGAGAATGGTTGATTGGA+CGG + Chr2:24646003-24646022 MsG0280008041.01.T01:CDS 50.0%
GGCTGTGAGTGATTTCGAGA+AGG + Chr2:24638082-24638101 MsG0280008041.01.T01:intron 50.0%
GTACGGCGAGAATGGTTGAT+TGG + Chr2:24645999-24646018 MsG0280008041.01.T01:CDS 50.0%
GTCATGTGACCGTAAGGTCA+CGG + Chr2:24638135-24638154 MsG0280008041.01.T01:intron 50.0%
TCATGTGACCGTAAGGTCAC+GGG + Chr2:24638136-24638155 MsG0280008041.01.T01:intron 50.0%
TCGAAAATCGTTGGAGAGGG+CGG + Chr2:24642786-24642805 MsG0280008041.01.T01:intron 50.0%
TGAGGACCAGCTATCTCAAG+AGG + Chr2:24640685-24640704 MsG0280008041.01.T01:intron 50.0%
TGGAGCGGTGCGAAAATCAT+TGG + Chr2:24638361-24638380 MsG0280008041.01.T01:intron 50.0%
TGTCATGAACTCCAACCTCC+TGG - Chr2:24650323-24650342 None:intergenic 50.0%
TTCTTCTCCTTCGACCATGC+CGG + Chr2:24648419-24648438 MsG0280008041.01.T01:intron 50.0%
! ATTTTCGAACCGCTTCGGCA+TGG - Chr2:24642774-24642793 None:intergenic 50.0%
! ATTTTTGCACCGCTCTGGCA+TGG - Chr2:24639122-24639141 None:intergenic 50.0%
! CAACGATTTTCGAACCGCTC+CGG - Chr2:24648441-24648460 None:intergenic 50.0%
! CAACGATTTTTGCACCGCTC+TGG - Chr2:24639127-24639146 None:intergenic 50.0%
! CCACGCCTTTTGACCCATAA+TGG + Chr2:24649994-24650013 MsG0280008041.01.T01:intron 50.0%
! CGCCTTTTGACCCATAATGG+AGG + Chr2:24649997-24650016 MsG0280008041.01.T01:intron 50.0%
! CTGTCACGCAGAGGAGTATA+TGG + Chr2:24639945-24639964 MsG0280008041.01.T01:intron 50.0%
! GAGGAGGCACAACTAAAGGA+CGG + Chr2:24647088-24647107 MsG0280008041.01.T01:intron 50.0%
! GCCAATCTTCAAGGGTGTAG+TGG + Chr2:24641862-24641881 MsG0280008041.01.T01:CDS 50.0%
! GCTGAGGAGGCACAACTAAA+GGG + Chr2:24645317-24645336 MsG0280008041.01.T01:intron 50.0%
! TGCTGAGGAGGCACAACTAA+AGG + Chr2:24645316-24645335 MsG0280008041.01.T01:intron 50.0%
! TGGGTCAAAAGGCGTGAAAC+CGG - Chr2:24639200-24639219 None:intergenic 50.0%
AAAGGCCGTAGAGGTTGGGA+AGG + Chr2:24641455-24641474 MsG0280008041.01.T01:CDS 55.0%
AACCGCTTCGGCATGGTTGA+AGG - Chr2:24642767-24642786 None:intergenic 55.0%
AAGGCGTGAAACCGGTGCAA+GGG - Chr2:24648521-24648540 None:intergenic 55.0%
AAGGCGTGAAACCGGTGGAA+GGG - Chr2:24642843-24642862 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr2:24638148-24638167 MsG0280008041.01.T01:intron 55.0%
ACTGAAGCTCCCGCATATGC+AGG - Chr2:24638245-24638264 None:intergenic 55.0%
AGAGAAGGCTCGCAAGGTGT+GGG + Chr2:24640718-24640737 MsG0280008041.01.T01:intron 55.0%
AGTTGCGCAGTCAGTGTAGC+TGG + Chr2:24646451-24646470 MsG0280008041.01.T01:intron 55.0%
ATCATGCCGGGAAACATGGC+TGG - Chr2:24650598-24650617 None:intergenic 55.0%
CAACCCGTACATGACTGGGA+AGG + Chr2:24644994-24645013 MsG0280008041.01.T01:intron 55.0%
CAAGGTCAAGAACACGGACC+AGG - Chr2:24638467-24638486 None:intergenic 55.0%
CGCAAGGTGTGGGAGGTTAA+TGG + Chr2:24640728-24640747 MsG0280008041.01.T01:intron 55.0%
CGGAGCGGTTCGAAAATCGT+TGG + Chr2:24648439-24648458 MsG0280008041.01.T01:intron 55.0%
CGGTCCTTCCCAGTCATGTA+CGG - Chr2:24645001-24645020 None:intergenic 55.0%
CTCCTTCAACCATGCCAGAG+CGG + Chr2:24639110-24639129 MsG0280008041.01.T01:intron 55.0%
CTCCTTCAACCATGCCGAAG+CGG + Chr2:24642762-24642781 MsG0280008041.01.T01:intron 55.0%
CTGAAGCTCCCGCATATGCA+GGG - Chr2:24638244-24638263 None:intergenic 55.0%
CTGGTCCGTGTTCTTGACCT+TGG + Chr2:24638465-24638484 MsG0280008041.01.T01:intron 55.0%
GCCAAGAGTAAAGGCCGTAG+AGG + Chr2:24641446-24641465 MsG0280008041.01.T01:CDS 55.0%
GCGGACCAAGGTCAAGAACA+CGG - Chr2:24638473-24638492 None:intergenic 55.0%
GGCTGATACGCCAGATCAAG+TGG + Chr2:24644033-24644052 MsG0280008041.01.T01:CDS 55.0%
GGTCCTTCCCAGTCATGTAC+GGG - Chr2:24645000-24645019 None:intergenic 55.0%
GTGTTCTTGACCTTGGTCCG+CGG + Chr2:24638472-24638491 MsG0280008041.01.T01:intron 55.0%
TAGAGAAGGCTCGCAAGGTG+TGG + Chr2:24640717-24640736 MsG0280008041.01.T01:intron 55.0%
TGGTGTAGAGAAGGCTCGCA+AGG + Chr2:24640712-24640731 MsG0280008041.01.T01:intron 55.0%
! AAAGGCGTGAAACCGGTGCA+AGG - Chr2:24648522-24648541 None:intergenic 55.0%
! AAAGGCGTGAAACCGGTGGA+AGG - Chr2:24642844-24642863 None:intergenic 55.0%
! ATTTTCGAACCGCTCCGGCA+TGG - Chr2:24648436-24648455 None:intergenic 55.0%
! ATTTTCGCACCGCTCCAGCA+TGG - Chr2:24638358-24638377 None:intergenic 55.0%
! CAAGGGTGTAGTGGTTGGGA+AGG + Chr2:24641871-24641890 MsG0280008041.01.T01:CDS 55.0%
! GAGGAGGCACAACTAAAGGG+CGG + Chr2:24645320-24645339 MsG0280008041.01.T01:intron 55.0%
! GTCAAAAGGCGTGAAACCGG+TGG - Chr2:24642848-24642867 None:intergenic 55.0%
AAATCGTTGGAGAGGGCGGC+AGG + Chr2:24639138-24639157 MsG0280008041.01.T01:intron 60.0%
AATCGTTGGAGAGGGCGGCA+CGG + Chr2:24639139-24639158 MsG0280008041.01.T01:intron 60.0%
AATCGTTGGAGAGGGCGGCA+GGG + Chr2:24639139-24639158 MsG0280008041.01.T01:intron 60.0%
ACACAGCTGCTGTCACGCAG+AGG + Chr2:24639936-24639955 MsG0280008041.01.T01:intron 60.0%
AGATCGCTGCACACGGTGAG+TGG - Chr2:24642820-24642839 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + Chr2:24638102-24638121 MsG0280008041.01.T01:intron 60.0%
AGTTGCGCGGTCAGTGTAGC+TGG + Chr2:24643151-24643170 MsG0280008041.01.T01:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + Chr2:24638249-24638268 MsG0280008041.01.T01:intron 60.0%
ATTGGAGAGGGCTGTGCAGC+CGG + Chr2:24638379-24638398 MsG0280008041.01.T01:intron 60.0%
CACCGCTCTGGCATGGTTGA+AGG - Chr2:24639115-24639134 None:intergenic 60.0%
CATATGCAGGGTCCGGGAAG+GGG - Chr2:24638232-24638251 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + Chr2:24638232-24638251 MsG0280008041.01.T01:intron 60.0%
GCAAGGGAGATCGCTGCACA+CGG - Chr2:24648505-24648524 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - Chr2:24638233-24638252 None:intergenic 60.0%
GGAAGGGAGATCGCTGCACA+CGG - Chr2:24642827-24642846 None:intergenic 60.0%
TGCAGCGATCTCCCTTCCAC+CGG + Chr2:24642829-24642848 MsG0280008041.01.T01:intron 60.0%
TGCAGCGATCTCCCTTGCAC+CGG + Chr2:24648507-24648526 MsG0280008041.01.T01:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + Chr2:24638233-24638252 MsG0280008041.01.T01:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + Chr2:24638217-24638236 MsG0280008041.01.T01:intron 60.0%
! CGCTGCACCGACAGTCTTAC+CGG - Chr2:24639165-24639184 None:intergenic 60.0%
AACCGCTCCGGCATGGTCGA+AGG - Chr2:24648429-24648448 None:intergenic 65.0%
AATCGTTGGAGAGGGCGGCG+CGG + Chr2:24648453-24648472 MsG0280008041.01.T01:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - Chr2:24638234-24638253 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - Chr2:24638219-24638238 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - Chr2:24638238-24638257 None:intergenic 65.0%
CTCCTTCGACCATGCCGGAG+CGG + Chr2:24648424-24648443 MsG0280008041.01.T01:intron 65.0%
GAAGGCTCGCAAGGTGTGGG+AGG + Chr2:24640721-24640740 MsG0280008041.01.T01:intron 65.0%
GCTCCCGCATATGCAGGGTC+CGG - Chr2:24638239-24638258 None:intergenic 65.0%
GGCAGGGCCGGTAAGACTGT+CGG + Chr2:24639155-24639174 MsG0280008041.01.T01:intron 65.0%
TCGCTGCACACGGTGAGTGG+CGG - Chr2:24642817-24642836 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + Chr2:24638250-24638269 MsG0280008041.01.T01:intron 65.0%
GTTGGAGAGGGCGGCAGGGC+CGG + Chr2:24639143-24639162 MsG0280008041.01.T01:intron 75.0%
! GTTGGAGAGGGCGGCGCGGC+CGG + Chr2:24648457-24648476 MsG0280008041.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr2 gene 24637281 24650640 24637281 ID=MsG0280008041.01;Name=MsG0280008041.01
Chr2 mRNA 24637281 24650640 24637281 ID=MsG0280008041.01.T01;Parent=MsG0280008041.01;Name=MsG0280008041.01.T01;_AED=0.46;_eAED=0.46;_QI=145|0.62|1|1|0.37|0.33|9|245|222
Chr2 exon 24637281 24637391 24637281 ID=MsG0280008041.01.T01:exon:3108;Parent=MsG0280008041.01.T01
Chr2 exon 24638802 24638875 24638802 ID=MsG0280008041.01.T01:exon:3109;Parent=MsG0280008041.01.T01
Chr2 exon 24641433 24641480 24641433 ID=MsG0280008041.01.T01:exon:3110;Parent=MsG0280008041.01.T01
Chr2 exon 24641849 24641896 24641849 ID=MsG0280008041.01.T01:exon:3111;Parent=MsG0280008041.01.T01
Chr2 exon 24642428 24642502 24642428 ID=MsG0280008041.01.T01:exon:3112;Parent=MsG0280008041.01.T01
Chr2 exon 24644017 24644088 24644017 ID=MsG0280008041.01.T01:exon:3113;Parent=MsG0280008041.01.T01
Chr2 exon 24645996 24646070 24645996 ID=MsG0280008041.01.T01:exon:3114;Parent=MsG0280008041.01.T01
Chr2 exon 24648117 24648191 24648117 ID=MsG0280008041.01.T01:exon:3115;Parent=MsG0280008041.01.T01
Chr2 exon 24650160 24650640 24650160 ID=MsG0280008041.01.T01:exon:3116;Parent=MsG0280008041.01.T01
Chr2 five_prime_UTR 24637281 24637391 24637281 ID=MsG0280008041.01.T01:five_prime_utr;Parent=MsG0280008041.01.T01
Chr2 five_prime_UTR 24638802 24638835 24638802 ID=MsG0280008041.01.T01:five_prime_utr;Parent=MsG0280008041.01.T01
Chr2 CDS 24638836 24638875 24638836 ID=MsG0280008041.01.T01:cds;Parent=MsG0280008041.01.T01
Chr2 CDS 24641433 24641480 24641433 ID=MsG0280008041.01.T01:cds;Parent=MsG0280008041.01.T01
Chr2 CDS 24641849 24641896 24641849 ID=MsG0280008041.01.T01:cds;Parent=MsG0280008041.01.T01
Chr2 CDS 24642428 24642502 24642428 ID=MsG0280008041.01.T01:cds;Parent=MsG0280008041.01.T01
Chr2 CDS 24644017 24644088 24644017 ID=MsG0280008041.01.T01:cds;Parent=MsG0280008041.01.T01
Chr2 CDS 24645996 24646070 24645996 ID=MsG0280008041.01.T01:cds;Parent=MsG0280008041.01.T01
Chr2 CDS 24648117 24648191 24648117 ID=MsG0280008041.01.T01:cds;Parent=MsG0280008041.01.T01
Chr2 CDS 24650160 24650395 24650160 ID=MsG0280008041.01.T01:cds;Parent=MsG0280008041.01.T01
Chr2 three_prime_UTR 24650396 24650640 24650396 ID=MsG0280008041.01.T01:three_prime_utr;Parent=MsG0280008041.01.T01
Gene Sequence

>MsG0280008041.01.T01

ATGGCTCAACAGTTTAATGCTATGATGAAAGAAAAAGAAAAAGTTGATGAGGAGCCAAGAGTAAAGGCCGTAGAGGTTGGGAAGGATCCAGTTACTGGGAAGCCAATCTTCAAGGGTGTAGTGGTTGGGAAGGATCCTTCTTCGGTGCAATATATTGAATTGCAAAATCTCACGGTTCAACGGATGTTAGCTATCATTAAAGAAAAAAATAACAGTACGGCGAGAATGGCTGATACGCCAGATCAAGTGGTTCAATGGTTTAATGATATCATTAAAGAAGAAAGTAGTACGGCGAGAATGGTTGATTGGACGGATCAATTGGATCAACATTATAATGCTTTCCTTAAAGAAAAAGAAAGTAGTACGGCGAGAATGGTTGATTGGACGGATCAATTGGATCAACATTATAATGCTTTCCTTAAAGAAAAAGAAAAAATGGAAAAAGAAGAAGTTTCTGCGAGGAAATCCAAGAAGAAGAAGCAAGAGGCTGCTGCTGCAGATGAAGATGACATGGCTGTAGATAAGGCTGCAGAAATTACAATTGGTGATGCGGAGGATCACAAGTCAGAAAAGAAAGAGAAGAGAAAGTTGGACCAGGAGGTTGGAGTTCATGACAAGGTTGTAGATGATAGTGCCAACGCTGATTCAAGCAAGAAGAAAAAGAAATAA
Protein sequence

>MsG0280008041.01.T01

MAQQFNAMMKEKEKVDEEPRVKAVEVGKDPVTGKPIFKGVVVGKDPSSVQYIELQNLTVQRMLAIIKEKNNSTARMADTPDQVVQWFNDIIKEESSTARMVDWTDQLDQHYNAFLKEKESSTARMVDWTDQLDQHYNAFLKEKEKMEKEEVSARKSKKKKQEAAAADEDDMAVDKAAEITIGDAEDHKSEKKEKRKLDQEVGVHDKVVDDSANADSSKKKKK*