AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017719.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017719.01.T01 MTR_3g111060 96.599 441 14 1 1 440 1 441 0.0 889
MsG0380017719.01.T01 MTR_3g110142 41.593 452 228 9 1 436 1 432 1.78e-111 335
MsG0380017719.01.T01 MTR_3g110142 41.562 397 196 9 1 381 1 377 4.14e-93 286
MsG0380017719.01.T01 MTR_5g016600 28.041 296 162 9 187 440 151 437 1.75e-24 106
MsG0380017719.01.T01 MTR_4g094912 27.848 316 179 9 167 440 130 438 1.51e-22 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017719.01.T01 AT1G27600 56.433 443 141 8 1 440 1 394 6.00e-172 488
MsG0380017719.01.T01 AT1G27600 56.433 443 141 8 1 440 1 394 6.00e-172 488
MsG0380017719.01.T01 AT2G37090 35.638 376 186 12 57 414 4 341 1.08e-70 227
MsG0380017719.01.T01 AT5G67230 30.479 292 163 9 187 440 152 441 1.23e-29 120
MsG0380017719.01.T01 AT4G36890 28.754 313 171 10 171 440 148 451 1.13e-26 112

Find 123 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACAAATAAAATTCTTTA+TGG 0.108209 3:-99993863 None:intergenic
CGGAATGACGCCATTAATTT+AGG 0.156462 3:-99991010 None:intergenic
AAGCAAGAACAAGGCTATTT+TGG 0.178767 3:+99993339 MsG0380017719.01.T01:CDS
TCTTGAACTACATGAATTTC+AGG 0.191022 3:-99994081 None:intergenic
TGAAAAGTTTGTCTTATTCT+AGG 0.191970 3:+99993966 MsG0380017719.01.T01:three_prime_UTR
ATTTCAATCCCTAGATTTCT+AGG 0.225591 3:+99990967 MsG0380017719.01.T01:five_prime_UTR
TCTTCATGTACCTAAATTAA+TGG 0.228573 3:+99991000 MsG0380017719.01.T01:exon
TTCCACCAATTGTTCAATAA+AGG 0.288276 3:-99993646 None:intergenic
GGAAATGAATTCTGCTTCTA+TGG 0.295993 3:+99991690 MsG0380017719.01.T01:CDS
GCGATTATTGAGAATTGATT+TGG 0.304122 3:-99991374 None:intergenic
AGATTTCATGTTGATATGTC+TGG 0.307522 3:+99993430 MsG0380017719.01.T01:CDS
ACTGAGTCTAATTGCCGTAT+AGG 0.330564 3:-99993514 None:intergenic
GTAGGGCGCCGCCACCGCTT+TGG 0.351660 3:-99993484 None:intergenic
CATGAATTTCAGGTTGTTGC+TGG 0.352673 3:-99994071 None:intergenic
TGCGTTCTCTGTTTCTTCGT+TGG 0.355661 3:+99991235 MsG0380017719.01.T01:CDS
GACCACCTTTATTGAACAAT+TGG 0.367701 3:+99993641 MsG0380017719.01.T01:CDS
TTCTCAAGCATCCAACCCTT+TGG 0.387858 3:-99993756 None:intergenic
GCGTTCTCTGTTTCTTCGTT+GGG 0.390433 3:+99991236 MsG0380017719.01.T01:CDS
ATCGGAAACCCTAGAAATCT+AGG 0.394568 3:-99990976 None:intergenic
TATCACACACTCTATAGAAT+TGG 0.394651 3:-99993817 None:intergenic
ATTGAACATCATAAACTTGA+TGG 0.398247 3:+99991829 MsG0380017719.01.T01:CDS
GCCCTACTTCAAATCCTATA+CGG 0.399233 3:+99993500 MsG0380017719.01.T01:CDS
TCGTCGTTTCAGAGATTAAT+CGG 0.401703 3:+99991154 MsG0380017719.01.T01:CDS
TTCAGACAATCAGAGATATC+AGG 0.403188 3:+99991899 MsG0380017719.01.T01:CDS
AAAATAGCCTTGTTCTTGCT+TGG 0.406483 3:-99993337 None:intergenic
TTATTAGGTATGTTCCCTTT+CGG 0.411490 3:+99991262 MsG0380017719.01.T01:CDS
CACGTCAGCGTCGGTGGTGG+TGG 0.416469 3:+99991409 MsG0380017719.01.T01:CDS
CTGTGTAATGAAGAAATTAC+AGG 0.420105 3:-99990777 None:intergenic
GGATAAGGATAAGAAGAGTA+AGG 0.423109 3:+99991441 MsG0380017719.01.T01:CDS
GTTGCAAGAAAATAATGAAT+TGG 0.437417 3:+99993700 MsG0380017719.01.T01:CDS
CACGACCGTCACTACATAAA+CGG 0.444334 3:+99991055 MsG0380017719.01.T01:CDS
AATTCTATAGAGTGTGTGAT+AGG 0.451944 3:+99993819 MsG0380017719.01.T01:three_prime_UTR
AATGGCGAAAAGTTGCTTTC+AGG 0.453308 3:+99991212 MsG0380017719.01.T01:CDS
CACAAACTTCCATCTTCAAA+CGG 0.454365 3:+99991112 MsG0380017719.01.T01:CDS
AACTGAGATTTAGAAGTTAG+CGG 0.466415 3:-99993905 None:intergenic
TCAACGGATGTGAAGGATAG+AGG 0.473437 3:+99991775 MsG0380017719.01.T01:CDS
CATAATATAGTTTATCCAAA+GGG 0.474680 3:+99993741 MsG0380017719.01.T01:CDS
GTTGCTGGGACCCAAAGAAT+GGG 0.475869 3:-99994056 None:intergenic
GAGTAGTTTCCGTTTGAAGA+TGG 0.479126 3:-99991121 None:intergenic
GATTTCATGTTGATATGTCT+GGG 0.481532 3:+99993431 MsG0380017719.01.T01:CDS
TGTGGGATCCAAAGCGGTGG+CGG 0.482823 3:+99993476 MsG0380017719.01.T01:CDS
AGATGGAGACGACGGTGAAA+AGG 0.484318 3:-99991089 None:intergenic
TGTTGCTGGGACCCAAAGAA+TGG 0.485589 3:-99994057 None:intergenic
CACCTTTATTGAACAATTGG+TGG 0.486008 3:+99993644 MsG0380017719.01.T01:CDS
TGACGTGGATGACAGCATCT+AGG 0.490726 3:-99993782 None:intergenic
GGTGTCTGTGGTTATGAGTA+TGG 0.493038 3:-99990833 None:intergenic
TGGTGGTGATGATGAGGATA+AGG 0.495077 3:+99991426 MsG0380017719.01.T01:CDS
CTTGGTGCAAGCATGGCGAC+AGG 0.495355 3:-99993319 None:intergenic
ATGAATTTCAGGTTGTTGCT+GGG 0.496226 3:-99994070 None:intergenic
TGTGGTTATGAGTATGGATT+CGG 0.500729 3:-99990827 None:intergenic
GCCGTATAGGATTTGAAGTA+GGG 0.501903 3:-99993501 None:intergenic
ATAATGAAAAGCTGAAAGAG+AGG 0.501926 3:+99991515 MsG0380017719.01.T01:CDS
CATGAATGAGATTACCGAAA+GGG 0.506123 3:-99991276 None:intergenic
TAGTGACGGTCGTGATATGC+CGG 0.506800 3:-99991046 None:intergenic
ATTCCGACGGACGTTATCTC+CGG 0.516727 3:+99991027 MsG0380017719.01.T01:CDS
GAAGATGGAAGTTTGTGAGA+TGG 0.518700 3:-99991106 None:intergenic
GTTCTTGCTTGGTGCAAGCA+TGG 0.519522 3:-99993326 None:intergenic
TGCCGTATAGGATTTGAAGT+AGG 0.523006 3:-99993502 None:intergenic
CACACACTCTATAGAATTGG+TGG 0.524728 3:-99993814 None:intergenic
TCTCTCTCTTCACACGAAGA+AGG 0.525805 3:+99990868 MsG0380017719.01.T01:five_prime_UTR
TTGAACATCATAAACTTGAT+GGG 0.527171 3:+99991830 MsG0380017719.01.T01:CDS
TATGGATTCGGTTCGGATCG+AGG 0.530374 3:-99990815 None:intergenic
TTTCAATCCCTAGATTTCTA+GGG 0.530676 3:+99990968 MsG0380017719.01.T01:five_prime_UTR
AAGCACGTCAGCGTCGGTGG+TGG 0.531902 3:+99991406 MsG0380017719.01.T01:CDS
GGGTGTGATGTATAGGCATT+TGG 0.535560 3:+99991738 MsG0380017719.01.T01:CDS
GCAATTAGACTCAGTGAAAG+AGG 0.535687 3:+99993522 MsG0380017719.01.T01:CDS
ATATAGTTTATCCAAAGGGT+TGG 0.536359 3:+99993745 MsG0380017719.01.T01:CDS
TGCAATGGAAGCCAAGTGCT+TGG 0.537309 3:+99993373 MsG0380017719.01.T01:CDS
ATTGATTTGGCATCAGATTG+TGG 0.537571 3:-99991361 None:intergenic
GATAAGGATAAGAAGAGTAA+GGG 0.537759 3:+99991442 MsG0380017719.01.T01:CDS
TTGTATGCCACCCAAGCACT+TGG 0.538534 3:-99993384 None:intergenic
GGTGGAAGATGAGAGTCAAA+TGG 0.541257 3:+99993662 MsG0380017719.01.T01:CDS
ATCTGAGAAAATTGATATTG+TGG 0.542030 3:+99991549 MsG0380017719.01.T01:CDS
TTATGAGTATGGATTCGGTT+CGG 0.543767 3:-99990822 None:intergenic
TCAAATGGAAGGTTCGCCAC+CGG 0.544013 3:+99993677 MsG0380017719.01.T01:CDS
CACCAATTGTTCAATAAAGG+TGG 0.551699 3:-99993643 None:intergenic
CAAATGGAAGGTTCGCCACC+GGG 0.554822 3:+99993678 MsG0380017719.01.T01:CDS
ATTTAGGTACATGAAGAGAT+CGG 0.556856 3:-99990994 None:intergenic
GCAATGGAAGCCAAGTGCTT+GGG 0.557871 3:+99993374 MsG0380017719.01.T01:CDS
TAATGAAAAGCTGAAAGAGA+GGG 0.563255 3:+99991516 MsG0380017719.01.T01:CDS
TAAGAATTCAACGGATGTGA+AGG 0.565155 3:+99991768 MsG0380017719.01.T01:CDS
TTGGAGGGTCCGGTATGCAA+TGG 0.566859 3:+99993358 MsG0380017719.01.T01:CDS
ACTTGGCTTCCATTGCATAC+CGG 0.569129 3:-99993367 None:intergenic
TATAGAGTGTGTGATAGGTA+TGG 0.570408 3:+99993824 MsG0380017719.01.T01:three_prime_UTR
TCATCAGAGGAATAAAGCAT+TGG 0.572046 3:+99991801 MsG0380017719.01.T01:CDS
ACCACCCATAAAAGCGGCGG+CGG 0.572761 3:-99991664 None:intergenic
GAGAGAGAAGACGGTGTCTG+TGG 0.577430 3:-99990845 None:intergenic
TGAAAAGCGCGGTTATAAGT+CGG 0.578372 3:-99991598 None:intergenic
ATGCGACGATACAATCGAAA+GGG 0.578550 3:+99991187 MsG0380017719.01.T01:CDS
CTGTAATTTCTTCATTACAC+AGG 0.579666 3:+99990778 MsG0380017719.01.T01:five_prime_UTR
AATTAATGGCGTCATTCCGA+CGG 0.581992 3:+99991014 MsG0380017719.01.T01:exon
CATTCAACAGCACAATCCTG+TGG 0.583078 3:+99993458 MsG0380017719.01.T01:CDS
CTCAAACATGAACGCTGAGA+AGG 0.583981 3:+99991492 MsG0380017719.01.T01:CDS
TCATAATATAGTTTATCCAA+AGG 0.585209 3:+99993740 MsG0380017719.01.T01:CDS
GATACAATCGAAAGGGACAA+TGG 0.588516 3:+99991194 MsG0380017719.01.T01:CDS
TCGGAAACCCTAGAAATCTA+GGG 0.589072 3:-99990975 None:intergenic
CGGTGGTGGTGGTGATGATG+AGG 0.599517 3:+99991420 MsG0380017719.01.T01:CDS
CAATTAGACTCAGTGAAAGA+GGG 0.602242 3:+99993523 MsG0380017719.01.T01:CDS
GCTTGCACCAAGCAAGAACA+AGG 0.606742 3:+99993330 MsG0380017719.01.T01:CDS
TCCTGTGGGATCCAAAGCGG+TGG 0.608772 3:+99993473 MsG0380017719.01.T01:CDS
GCCACCGCTTTGGATCCCAC+AGG 0.619308 3:-99993474 None:intergenic
AGGATAGAGGAGTTCATCAG+AGG 0.628437 3:+99991788 MsG0380017719.01.T01:CDS
CGTCACTACATAAACGGCGG+TGG 0.628520 3:+99991061 MsG0380017719.01.T01:CDS
ATGGAAGCCAAGTGCTTGGG+TGG 0.635295 3:+99993377 MsG0380017719.01.T01:CDS
TCCACCACCACCCATAAAAG+CGG 0.639611 3:-99991670 None:intergenic
TGGTGGAAGATTACTTGACG+TGG 0.643604 3:-99993797 None:intergenic
CATGCGACGATACAATCGAA+AGG 0.645339 3:+99991186 MsG0380017719.01.T01:CDS
TGGAGACGACGGTGAAAAGG+CGG 0.646294 3:-99991086 None:intergenic
CACCGCCGTTTATGTAGTGA+CGG 0.648586 3:-99991060 None:intergenic
TCATGAATGAGATTACCGAA+AGG 0.650007 3:-99991277 None:intergenic
ATTCAACAGCACAATCCTGT+GGG 0.650054 3:+99993459 MsG0380017719.01.T01:CDS
AGAAAATTGATATTGTGGCG+AGG 0.651531 3:+99991554 MsG0380017719.01.T01:CDS
TTGCTGGGACCCAAAGAATG+GGG 0.653893 3:-99994055 None:intergenic
GAAGATGAGAGTCAAATGGA+AGG 0.657273 3:+99993666 MsG0380017719.01.T01:CDS
GGATACTCTTACAATTACAA+CGG 0.657840 3:-99993989 None:intergenic
ACCACCACCCATAAAAGCGG+CGG 0.658671 3:-99991667 None:intergenic
TTCGGATCGAGGTTGAAACT+CGG 0.669912 3:-99990804 None:intergenic
TCGTTTCAGAGATTAATCGG+TGG 0.678331 3:+99991157 MsG0380017719.01.T01:CDS
GGTGTGTACTAAGAATTCAA+CGG 0.679123 3:+99991759 MsG0380017719.01.T01:CDS
ATGCCGGAGATAACGTCCGT+CGG 0.686418 3:-99991030 None:intergenic
GACCGTCACTACATAAACGG+CGG 0.698582 3:+99991058 MsG0380017719.01.T01:CDS
CAATCCTGTGGGATCCAAAG+CGG 0.703864 3:+99993470 MsG0380017719.01.T01:CDS
AGTTTGTGAGATGGAGACGA+CGG 0.778732 3:-99991097 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTGAAAAATTCAAATT+TGG - Chr3:99993037-99993056 None:intergenic 10.0%
!! ATTACAAATAAAATTCTTTA+TGG - Chr3:99993866-99993885 None:intergenic 10.0%
!!! TTTTTTTTCTTAAATATCTT+TGG + Chr3:99992227-99992246 MsG0380017719.01.T01:intron 10.0%
!! AAAAAAAAAAACAATCATCA+AGG - Chr3:99992215-99992234 None:intergenic 15.0%
!! AAAAAAAAAACAATCATCAA+GGG - Chr3:99992214-99992233 None:intergenic 15.0%
!! AAATCAAAACAATACAAATT+AGG - Chr3:99992545-99992564 None:intergenic 15.0%
!! AACTTTAAGTATAAATTCAA+AGG - Chr3:99991987-99992006 None:intergenic 15.0%
!! AATAATAATCCTAAAAAAGT+AGG - Chr3:99991956-99991975 None:intergenic 15.0%
!! ATAAAATTCATACAAAGAAA+CGG - Chr3:99992259-99992278 None:intergenic 15.0%
!! ATTAAATAAATTTGTGTGTT+TGG + Chr3:99993067-99993086 MsG0380017719.01.T01:intron 15.0%
!!! ACTTTTTTAGGATTATTATT+CGG + Chr3:99991956-99991975 MsG0380017719.01.T01:intron 15.0%
!!! ATTTTCCTTTTTTAATGAAA+TGG + Chr3:99993008-99993027 MsG0380017719.01.T01:intron 15.0%
!!! TCTTTGTATGAATTTTATAA+CGG + Chr3:99992261-99992280 MsG0380017719.01.T01:intron 15.0%
!! AATCAATACATAACAATCAA+AGG - Chr3:99992986-99993005 None:intergenic 20.0%
!! CATAATATAGTTTATCCAAA+GGG + Chr3:99993741-99993760 MsG0380017719.01.T01:CDS 20.0%
!! GTGTAAATAAAAGTAATGAT+AGG - Chr3:99993564-99993583 None:intergenic 20.0%
!! TAAATAAAAGTAATGATAGG+AGG - Chr3:99993561-99993580 None:intergenic 20.0%
!! TCATAATATAGTTTATCCAA+AGG + Chr3:99993740-99993759 MsG0380017719.01.T01:CDS 20.0%
!!! AATTTTTCTCTCTCTTTTTT+GGG - Chr3:99994035-99994054 None:intergenic 20.0%
!!! CATATTTTTTGAATAGGTTA+GGG + Chr3:99991623-99991642 MsG0380017719.01.T01:CDS 20.0%
!!! CTTTGTATGAATTTTATAAC+GGG + Chr3:99992262-99992281 MsG0380017719.01.T01:intron 20.0%
!!! GTAGTTCAAGAAATTTTTAT+GGG + Chr3:99994093-99994112 MsG0380017719.01.T01:three_prime_UTR 20.0%
!!! TAAAGTTATATTGCTTGTTT+TGG + Chr3:99992000-99992019 MsG0380017719.01.T01:intron 20.0%
!!! TCATATTTTTTGAATAGGTT+AGG + Chr3:99991622-99991641 MsG0380017719.01.T01:CDS 20.0%
!!! TGTAGTTCAAGAAATTTTTA+TGG + Chr3:99994092-99994111 MsG0380017719.01.T01:three_prime_UTR 20.0%
!!! TTCAGTCATATTTTTTGAAT+AGG + Chr3:99991617-99991636 MsG0380017719.01.T01:CDS 20.0%
! AAAACATGCTAATGTAACAA+AGG - Chr3:99992647-99992666 None:intergenic 25.0%
! ATCTGAGAAAATTGATATTG+TGG + Chr3:99991549-99991568 MsG0380017719.01.T01:CDS 25.0%
! ATTGAACATCATAAACTTGA+TGG + Chr3:99991829-99991848 MsG0380017719.01.T01:CDS 25.0%
! CAGGAAATAAAGTGAAAATA+CGG + Chr3:99992724-99992743 MsG0380017719.01.T01:intron 25.0%
! CTCCTACACTTAATTAAAAA+GGG - Chr3:99992830-99992849 None:intergenic 25.0%
! GGATTCCATTTCATTAAAAA+AGG - Chr3:99993016-99993035 None:intergenic 25.0%
! GGTGAAAACAAGATTTATAA+AGG - Chr3:99992680-99992699 None:intergenic 25.0%
! GTTGCAAGAAAATAATGAAT+TGG + Chr3:99993700-99993719 MsG0380017719.01.T01:CDS 25.0%
! TCTTCATGTACCTAAATTAA+TGG + Chr3:99991000-99991019 MsG0380017719.01.T01:exon 25.0%
! TTGAACATCATAAACTTGAT+GGG + Chr3:99991830-99991849 MsG0380017719.01.T01:CDS 25.0%
!! ATAATACCTTTAACTTTGAC+AGG + Chr3:99993617-99993636 MsG0380017719.01.T01:intron 25.0%
!! GAATTTTTCTCTCTCTTTTT+TGG - Chr3:99994036-99994055 None:intergenic 25.0%
!! TGAAAAGTTTGTCTTATTCT+AGG + Chr3:99993966-99993985 MsG0380017719.01.T01:three_prime_UTR 25.0%
!!! ATTTTTCTCTCTCTTTTTTG+GGG - Chr3:99994034-99994053 None:intergenic 25.0%
!!! GGTTTGTTATACTTTTTAAC+TGG + Chr3:99994114-99994133 MsG0380017719.01.T01:three_prime_UTR 25.0%
!!! TGTGTTATACCTACTTTTTT+AGG + Chr3:99991944-99991963 MsG0380017719.01.T01:intron 25.0%
!!! TTCCCTTTTTAATTAAGTGT+AGG + Chr3:99992825-99992844 MsG0380017719.01.T01:intron 25.0%
AAAAAAACAATCATCAAGGG+AGG - Chr3:99992211-99992230 None:intergenic 30.0%
AAAAAACAATCATCAAGGGA+GGG - Chr3:99992210-99992229 None:intergenic 30.0%
AAAAACACAATTGCCAAAGA+TGG - Chr3:99992963-99992982 None:intergenic 30.0%
AAAAATATGACTGAAAAGCG+CGG - Chr3:99991612-99991631 None:intergenic 30.0%
AAAAGTAGGTATAACACAAC+AGG - Chr3:99991942-99991961 None:intergenic 30.0%
AACTGAGATTTAGAAGTTAG+CGG - Chr3:99993908-99993927 None:intergenic 30.0%
AAGTTAAATGATGTACACAG+AGG - Chr3:99993191-99993210 None:intergenic 30.0%
AATTCTATAGAGTGTGTGAT+AGG + Chr3:99993819-99993838 MsG0380017719.01.T01:three_prime_UTR 30.0%
AGAAAAATTCCCCATTCTTT+GGG + Chr3:99994046-99994065 MsG0380017719.01.T01:three_prime_UTR 30.0%
AGATTTCATGTTGATATGTC+TGG + Chr3:99993430-99993449 MsG0380017719.01.T01:CDS 30.0%
AGTTATGAAGGTGACATTTA+CGG - Chr3:99992402-99992421 None:intergenic 30.0%
ATAATGAAAAGCTGAAAGAG+AGG + Chr3:99991515-99991534 MsG0380017719.01.T01:CDS 30.0%
ATATAGTTTATCCAAAGGGT+TGG + Chr3:99993745-99993764 MsG0380017719.01.T01:CDS 30.0%
ATTTAGGTACATGAAGAGAT+CGG - Chr3:99990997-99991016 None:intergenic 30.0%
ATTTCAATCCCTAGATTTCT+AGG + Chr3:99990967-99990986 MsG0380017719.01.T01:five_prime_UTR 30.0%
CAGTTCAACATTAGAACATA+GGG - Chr3:99993274-99993293 None:intergenic 30.0%
CCTCCTACACTTAATTAAAA+AGG - Chr3:99992831-99992850 None:intergenic 30.0%
CTGTAATTTCTTCATTACAC+AGG + Chr3:99990778-99990797 MsG0380017719.01.T01:five_prime_UTR 30.0%
CTGTGTAATGAAGAAATTAC+AGG - Chr3:99990780-99990799 None:intergenic 30.0%
CTTCATAAATTCTCGAAAAC+AGG + Chr3:99992705-99992724 MsG0380017719.01.T01:intron 30.0%
GATAAGGATAAGAAGAGTAA+GGG + Chr3:99991442-99991461 MsG0380017719.01.T01:CDS 30.0%
GATTTCATGTTGATATGTCT+GGG + Chr3:99993431-99993450 MsG0380017719.01.T01:CDS 30.0%
GCGATTATTGAGAATTGATT+TGG - Chr3:99991377-99991396 None:intergenic 30.0%
GGATACTCTTACAATTACAA+CGG - Chr3:99993992-99994011 None:intergenic 30.0%
TAATGAAAAGCTGAAAGAGA+GGG + Chr3:99991516-99991535 MsG0380017719.01.T01:CDS 30.0%
TATCACACACTCTATAGAAT+TGG - Chr3:99993820-99993839 None:intergenic 30.0%
TATCAGATAATACGAATTGC+AGG - Chr3:99993600-99993619 None:intergenic 30.0%
TCGAGAATTTATGAAGGAAA+AGG - Chr3:99992701-99992720 None:intergenic 30.0%
TCTTGAACTACATGAATTTC+AGG - Chr3:99994084-99994103 None:intergenic 30.0%
TGCTGAATTGTTGAGAAAAA+CGG + Chr3:99991717-99991736 MsG0380017719.01.T01:CDS 30.0%
TTATTAGGTATGTTCCCTTT+CGG + Chr3:99991262-99991281 MsG0380017719.01.T01:CDS 30.0%
TTCCACCAATTGTTCAATAA+AGG - Chr3:99993649-99993668 None:intergenic 30.0%
TTGGATGACACAATTCATAA+AGG - Chr3:99993231-99993250 None:intergenic 30.0%
TTTAATTAAGTGTAGGAGGA+AGG + Chr3:99992832-99992851 MsG0380017719.01.T01:intron 30.0%
TTTCAATCCCTAGATTTCTA+GGG + Chr3:99990968-99990987 MsG0380017719.01.T01:five_prime_UTR 30.0%
! TTCATTATTTTCTTGCAACC+CGG - Chr3:99993699-99993718 None:intergenic 30.0%
! TTCTTCGTTGGGTTTTTATT+AGG + Chr3:99991247-99991266 MsG0380017719.01.T01:CDS 30.0%
!! CCTTTTTAATTAAGTGTAGG+AGG + Chr3:99992828-99992847 MsG0380017719.01.T01:intron 30.0%
!! CTGTTTTCGAGAATTTATGA+AGG - Chr3:99992707-99992726 None:intergenic 30.0%
!! TGTATGAATTTTATAACGGG+CGG + Chr3:99992265-99992284 MsG0380017719.01.T01:intron 30.0%
!!! AACTGGTTTTATAGTCGTTT+TGG + Chr3:99993289-99993308 MsG0380017719.01.T01:intron 30.0%
!!! ACTTTTTTCCCTTCCATTTT+CGG - Chr3:99992797-99992816 None:intergenic 30.0%
!!! AGTTATATTGCTTGTTTTGG+AGG + Chr3:99992003-99992022 MsG0380017719.01.T01:intron 30.0%
!!! CTAAATCTCAGTTTTGTTAG+TGG + Chr3:99993915-99993934 MsG0380017719.01.T01:three_prime_UTR 30.0%
!!! TAAATTTGCGCCTTGTTTTT+GGG + Chr3:99992580-99992599 MsG0380017719.01.T01:intron 30.0%
!!! TTTTTCTCTCTCTTTTTTGG+GGG - Chr3:99994033-99994052 None:intergenic 30.0%
AAATGATGTACACAGAGGAT+GGG - Chr3:99993186-99993205 None:intergenic 35.0%
AATACGAATTGCAGGTGATA+TGG - Chr3:99993592-99993611 None:intergenic 35.0%
ACCAAAAGCCAACAAACAAA+AGG - Chr3:99992063-99992082 None:intergenic 35.0%
AGAAAATTGATATTGTGGCG+AGG + Chr3:99991554-99991573 MsG0380017719.01.T01:CDS 35.0%
ATACGAATTGCAGGTGATAT+GGG - Chr3:99993591-99993610 None:intergenic 35.0%
CAACATTAGAACATAGGGTT+AGG - Chr3:99993269-99993288 None:intergenic 35.0%
CAATTAGACTCAGTGAAAGA+GGG + Chr3:99993523-99993542 MsG0380017719.01.T01:CDS 35.0%
CACAAACTTCCATCTTCAAA+CGG + Chr3:99991112-99991131 MsG0380017719.01.T01:CDS 35.0%
CACCAATTGTTCAATAAAGG+TGG - Chr3:99993646-99993665 None:intergenic 35.0%
CACCTTTATTGAACAATTGG+TGG + Chr3:99993644-99993663 MsG0380017719.01.T01:CDS 35.0%
CATGAATGAGATTACCGAAA+GGG - Chr3:99991279-99991298 None:intergenic 35.0%
CCAGTTCAACATTAGAACAT+AGG - Chr3:99993275-99993294 None:intergenic 35.0%
CCTATGTTCTAATGTTGAAC+TGG + Chr3:99993272-99993291 MsG0380017719.01.T01:intron 35.0%
CTTGTGAATACCCAAAAACA+AGG - Chr3:99992593-99992612 None:intergenic 35.0%
GACCACCTTTATTGAACAAT+TGG + Chr3:99993641-99993660 MsG0380017719.01.T01:CDS 35.0%
GAGAAAAATTCCCCATTCTT+TGG + Chr3:99994045-99994064 MsG0380017719.01.T01:three_prime_UTR 35.0%
GCTGAATTGTTGAGAAAAAC+GGG + Chr3:99991718-99991737 MsG0380017719.01.T01:CDS 35.0%
GGAAATGAATTCTGCTTCTA+TGG + Chr3:99991690-99991709 MsG0380017719.01.T01:CDS 35.0%
GGATAAGGATAAGAAGAGTA+AGG + Chr3:99991441-99991460 MsG0380017719.01.T01:CDS 35.0%
GGTGTGTACTAAGAATTCAA+CGG + Chr3:99991759-99991778 MsG0380017719.01.T01:CDS 35.0%
GTAGATACAACTCAGAAAAC+TGG - Chr3:99993105-99993124 None:intergenic 35.0%
TAAATGATGTACACAGAGGA+TGG - Chr3:99993187-99993206 None:intergenic 35.0%
TAAGAATTCAACGGATGTGA+AGG + Chr3:99991768-99991787 MsG0380017719.01.T01:CDS 35.0%
TAGGAACTGAATGAACAAGT+TGG - Chr3:99993250-99993269 None:intergenic 35.0%
TATAGAGTGTGTGATAGGTA+TGG + Chr3:99993824-99993843 MsG0380017719.01.T01:three_prime_UTR 35.0%
TCATCAGAGGAATAAAGCAT+TGG + Chr3:99991801-99991820 MsG0380017719.01.T01:CDS 35.0%
TCATGAATGAGATTACCGAA+AGG - Chr3:99991280-99991299 None:intergenic 35.0%
TCGTCGTTTCAGAGATTAAT+CGG + Chr3:99991154-99991173 MsG0380017719.01.T01:CDS 35.0%
TGTGGTTATGAGTATGGATT+CGG - Chr3:99990830-99990849 None:intergenic 35.0%
TTCAGACAATCAGAGATATC+AGG + Chr3:99991899-99991918 MsG0380017719.01.T01:CDS 35.0%
! AAGCAAGAACAAGGCTATTT+TGG + Chr3:99993339-99993358 MsG0380017719.01.T01:CDS 35.0%
! AATGACGTATTGACCGAAAA+TGG + Chr3:99992781-99992800 MsG0380017719.01.T01:intron 35.0%
! GTTTTCTGAGTTGTATCTAC+TGG + Chr3:99993105-99993124 MsG0380017719.01.T01:intron 35.0%
! TTATGAGTATGGATTCGGTT+CGG - Chr3:99990825-99990844 None:intergenic 35.0%
! TTGTTTTCACGATGTTGTTG+AGG - Chr3:99991307-99991326 None:intergenic 35.0%
!! AAAATAGCCTTGTTCTTGCT+TGG - Chr3:99993340-99993359 None:intergenic 35.0%
!! AAGAACAAGGCTATTTTGGA+GGG + Chr3:99993343-99993362 MsG0380017719.01.T01:CDS 35.0%
!! ATCGTTTGCCTTTTGTTTGT+TGG + Chr3:99992052-99992071 MsG0380017719.01.T01:intron 35.0%
!! ATGAATTTCAGGTTGTTGCT+GGG - Chr3:99994073-99994092 None:intergenic 35.0%
!! ATTGATTTGGCATCAGATTG+TGG - Chr3:99991364-99991383 None:intergenic 35.0%
!! ATTTGGGAGTTTGGGTTTTT+GGG + Chr3:99992178-99992197 MsG0380017719.01.T01:intron 35.0%
!! TTTATAGTCGTTTTGGCACT+TGG + Chr3:99993296-99993315 MsG0380017719.01.T01:intron 35.0%
!!! CTAAATTTGCGCCTTGTTTT+TGG + Chr3:99992579-99992598 MsG0380017719.01.T01:intron 35.0%
!!! GTATGAATTTTATAACGGGC+GGG + Chr3:99992266-99992285 MsG0380017719.01.T01:intron 35.0%
!!! TATTGCTTGTTTTGGAGGTA+TGG + Chr3:99992008-99992027 MsG0380017719.01.T01:intron 35.0%
!!! TTTTTTGAATAGGTTAGGGC+AGG + Chr3:99991627-99991646 MsG0380017719.01.T01:CDS 35.0%
AAGTTCGTGGGATTGTGATT+TGG + Chr3:99992161-99992180 MsG0380017719.01.T01:intron 40.0%
AATTAATGGCGTCATTCCGA+CGG + Chr3:99991014-99991033 MsG0380017719.01.T01:exon 40.0%
ACACAATTGCCAAAGATGGT+TGG - Chr3:99992959-99992978 None:intergenic 40.0%
ACTGAGTCTAATTGCCGTAT+AGG - Chr3:99993517-99993536 None:intergenic 40.0%
AGTTCGTGGGATTGTGATTT+GGG + Chr3:99992162-99992181 MsG0380017719.01.T01:intron 40.0%
ATCGGAAACCCTAGAAATCT+AGG - Chr3:99990979-99990998 None:intergenic 40.0%
ATGCGACGATACAATCGAAA+GGG + Chr3:99991187-99991206 MsG0380017719.01.T01:CDS 40.0%
ATGTGTAGCATGTAAGTTCG+TGG + Chr3:99992148-99992167 MsG0380017719.01.T01:intron 40.0%
ATTAAGTGTAGGAGGAAGGT+AGG + Chr3:99992836-99992855 MsG0380017719.01.T01:intron 40.0%
ATTCAACAGCACAATCCTGT+GGG + Chr3:99993459-99993478 MsG0380017719.01.T01:CDS 40.0%
CACACACTCTATAGAATTGG+TGG - Chr3:99993817-99993836 None:intergenic 40.0%
CCGATACACTTGTAGTCTAA+CGG + Chr3:99992291-99992310 MsG0380017719.01.T01:intron 40.0%
CCGTTAGACTACAAGTGTAT+CGG - Chr3:99992294-99992313 None:intergenic 40.0%
CGGAATGACGCCATTAATTT+AGG - Chr3:99991013-99991032 None:intergenic 40.0%
CTCAAGAACAACCAACTTGT+CGG - Chr3:99992430-99992449 None:intergenic 40.0%
GAAAAACGGGTGTGATGTAT+AGG + Chr3:99991731-99991750 MsG0380017719.01.T01:CDS 40.0%
GAAGATGAGAGTCAAATGGA+AGG + Chr3:99993666-99993685 MsG0380017719.01.T01:CDS 40.0%
GAAGATGGAAGTTTGTGAGA+TGG - Chr3:99991109-99991128 None:intergenic 40.0%
GAGTAGTTTCCGTTTGAAGA+TGG - Chr3:99991124-99991143 None:intergenic 40.0%
GATACAATCGAAAGGGACAA+TGG + Chr3:99991194-99991213 MsG0380017719.01.T01:CDS 40.0%
GCAATTAGACTCAGTGAAAG+AGG + Chr3:99993522-99993541 MsG0380017719.01.T01:CDS 40.0%
GCCCTACTTCAAATCCTATA+CGG + Chr3:99993500-99993519 MsG0380017719.01.T01:CDS 40.0%
GCTTCAATGAAGGTTCATAG+TGG + Chr3:99992892-99992911 MsG0380017719.01.T01:intron 40.0%
GGTTACAGTTATTGAGGCAT+TGG + Chr3:99992353-99992372 MsG0380017719.01.T01:intron 40.0%
GTTAATGTGGCCGAAATTTG+CGG + Chr3:99992454-99992473 MsG0380017719.01.T01:intron 40.0%
GTTCTTGAGAGGAGTTAATG+TGG + Chr3:99992441-99992460 MsG0380017719.01.T01:intron 40.0%
TACACTTGTAGTCTAACGGT+TGG + Chr3:99992295-99992314 MsG0380017719.01.T01:intron 40.0%
TACGAATTGCAGGTGATATG+GGG - Chr3:99993590-99993609 None:intergenic 40.0%
TCGGAAACCCTAGAAATCTA+GGG - Chr3:99990978-99990997 None:intergenic 40.0%
TCGTTTCAGAGATTAATCGG+TGG + Chr3:99991157-99991176 MsG0380017719.01.T01:CDS 40.0%
TCTGCATTATCCAATGAGTC+TGG + Chr3:99992329-99992348 MsG0380017719.01.T01:intron 40.0%
TGAACCTTCATTGAAGCATG+TGG - Chr3:99992889-99992908 None:intergenic 40.0%
TGGTCTCCTGTCAAAGTTAA+AGG - Chr3:99993626-99993645 None:intergenic 40.0%
TGTCTCAATGCAGTTGTAGT+TGG + Chr3:99992099-99992118 MsG0380017719.01.T01:intron 40.0%
TGTGTAGCATGTAAGTTCGT+GGG + Chr3:99992149-99992168 MsG0380017719.01.T01:intron 40.0%
TTGTCGGTAGCAAGTTATGA+AGG - Chr3:99992414-99992433 None:intergenic 40.0%
! AATGGCGAAAAGTTGCTTTC+AGG + Chr3:99991212-99991231 MsG0380017719.01.T01:CDS 40.0%
! ACGTATTGACCGAAAATGGA+AGG + Chr3:99992785-99992804 MsG0380017719.01.T01:intron 40.0%
! ATTATTTTCTTGCAACCCGG+TGG - Chr3:99993696-99993715 None:intergenic 40.0%
! CGTATTGACCGAAAATGGAA+GGG + Chr3:99992786-99992805 MsG0380017719.01.T01:intron 40.0%
! GCCGTATAGGATTTGAAGTA+GGG - Chr3:99993504-99993523 None:intergenic 40.0%
! GGATTGTGATTTGGGAGTTT+GGG + Chr3:99992170-99992189 MsG0380017719.01.T01:intron 40.0%
! TGAAAAGCGCGGTTATAAGT+CGG - Chr3:99991601-99991620 None:intergenic 40.0%
! TGCCGTATAGGATTTGAAGT+AGG - Chr3:99993505-99993524 None:intergenic 40.0%
!! ACAAGTTGGTTGTTCTTGAG+AGG + Chr3:99992430-99992449 MsG0380017719.01.T01:intron 40.0%
!! ATAACTTGCTACCGACAAGT+TGG + Chr3:99992416-99992435 MsG0380017719.01.T01:intron 40.0%
!! CAAGAACAAGGCTATTTTGG+AGG + Chr3:99993342-99993361 MsG0380017719.01.T01:CDS 40.0%
!! CATGAATTTCAGGTTGTTGC+TGG - Chr3:99994074-99994093 None:intergenic 40.0%
!! GATTTGGGAGTTTGGGTTTT+TGG + Chr3:99992177-99992196 MsG0380017719.01.T01:intron 40.0%
!! TACAGTTATTGAGGCATTGG+TGG + Chr3:99992356-99992375 MsG0380017719.01.T01:intron 40.0%
!!! AGTTGGTACTGTTGGCTTTT+AGG + Chr3:99992116-99992135 MsG0380017719.01.T01:intron 40.0%
!!! GCCTTTTGTTTGTTGGCTTT+TGG + Chr3:99992059-99992078 MsG0380017719.01.T01:intron 40.0%
!!! GTTGGTACTGTTGGCTTTTA+GGG + Chr3:99992117-99992136 MsG0380017719.01.T01:intron 40.0%
ACGAATTGCAGGTGATATGG+GGG - Chr3:99993589-99993608 None:intergenic 45.0%
ACTTGGCTTCCATTGCATAC+CGG - Chr3:99993370-99993389 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAAGA+CGG - Chr3:99990857-99990876 None:intergenic 45.0%
AGGATAGAGGAGTTCATCAG+AGG + Chr3:99991788-99991807 MsG0380017719.01.T01:CDS 45.0%
AGTTTGTGAGATGGAGACGA+CGG - Chr3:99991100-99991119 None:intergenic 45.0%
CACGACCGTCACTACATAAA+CGG + Chr3:99991055-99991074 MsG0380017719.01.T01:CDS 45.0%
CATGCGACGATACAATCGAA+AGG + Chr3:99991186-99991205 MsG0380017719.01.T01:CDS 45.0%
CATTCAACAGCACAATCCTG+TGG + Chr3:99993458-99993477 MsG0380017719.01.T01:CDS 45.0%
CCCCAAAGAACCGCAAATTT+CGG - Chr3:99992467-99992486 None:intergenic 45.0%
CCGAAATTTGCGGTTCTTTG+GGG + Chr3:99992464-99992483 MsG0380017719.01.T01:intron 45.0%
CTCAAACATGAACGCTGAGA+AGG + Chr3:99991492-99991511 MsG0380017719.01.T01:CDS 45.0%
GCATTATCCAATGAGTCTGG+CGG + Chr3:99992332-99992351 MsG0380017719.01.T01:intron 45.0%
GCCGAAATTTGCGGTTCTTT+GGG + Chr3:99992463-99992482 MsG0380017719.01.T01:intron 45.0%
GGGTATTCACAAGCTTGTCT+GGG + Chr3:99992600-99992619 MsG0380017719.01.T01:intron 45.0%
GGGTGTGATGTATAGGCATT+TGG + Chr3:99991738-99991757 MsG0380017719.01.T01:CDS 45.0%
GGTGGAAGATGAGAGTCAAA+TGG + Chr3:99993662-99993681 MsG0380017719.01.T01:CDS 45.0%
GGTGTCTGTGGTTATGAGTA+TGG - Chr3:99990836-99990855 None:intergenic 45.0%
TCAACGGATGTGAAGGATAG+AGG + Chr3:99991775-99991794 MsG0380017719.01.T01:CDS 45.0%
TCTCTCTCTTCACACGAAGA+AGG + Chr3:99990868-99990887 MsG0380017719.01.T01:five_prime_UTR 45.0%
TCTGGCGGTTACAGTTATTG+AGG + Chr3:99992347-99992366 MsG0380017719.01.T01:intron 45.0%
TGGGTATTCACAAGCTTGTC+TGG + Chr3:99992599-99992618 MsG0380017719.01.T01:intron 45.0%
TGGTGGAAGATTACTTGACG+TGG - Chr3:99993800-99993819 None:intergenic 45.0%
TTCGGATCGAGGTTGAAACT+CGG - Chr3:99990807-99990826 None:intergenic 45.0%
TTCTCAAGCATCCAACCCTT+TGG - Chr3:99993759-99993778 None:intergenic 45.0%
! ATAGGTTAGGGCAGGTTTTG+AGG + Chr3:99991635-99991654 MsG0380017719.01.T01:CDS 45.0%
! CTCAGTGAAAGAGGGTTTTC+AGG + Chr3:99993531-99993550 MsG0380017719.01.T01:CDS 45.0%
! GCAGTTGTAGTTGGTACTGT+TGG + Chr3:99992108-99992127 MsG0380017719.01.T01:intron 45.0%
! GCGTTCTCTGTTTCTTCGTT+GGG + Chr3:99991236-99991255 MsG0380017719.01.T01:CDS 45.0%
! GGGATTGTGATTTGGGAGTT+TGG + Chr3:99992169-99992188 MsG0380017719.01.T01:intron 45.0%
! TCGGGGTTTTTACATACGCA+AGG + Chr3:99992494-99992513 MsG0380017719.01.T01:intron 45.0%
! TGCGTTCTCTGTTTCTTCGT+TGG + Chr3:99991235-99991254 MsG0380017719.01.T01:CDS 45.0%
! TGGTGGTGATGATGAGGATA+AGG + Chr3:99991426-99991445 MsG0380017719.01.T01:CDS 45.0%
! TTGAAAAAGCACGTCAGCGT+CGG + Chr3:99991400-99991419 MsG0380017719.01.T01:CDS 45.0%
!! GGTTCTTTGGGGCATCAATT+CGG + Chr3:99992475-99992494 MsG0380017719.01.T01:intron 45.0%
!! GTTCTTTGGGGCATCAATTC+GGG + Chr3:99992476-99992495 MsG0380017719.01.T01:intron 45.0%
!! TTCTTTGGGGCATCAATTCG+GGG + Chr3:99992477-99992496 MsG0380017719.01.T01:intron 45.0%
!!! TCTCTCTCTTTTTTGGGGGA+GGG - Chr3:99994029-99994048 None:intergenic 45.0%
!!! TTCTCTCTCTTTTTTGGGGG+AGG - Chr3:99994030-99994049 None:intergenic 45.0%
AATTGCAGGTGATATGGGGG+TGG - Chr3:99993586-99993605 None:intergenic 50.0%
ACGGCGCACAAGTGTTTAAC+TGG - Chr3:99992383-99992402 None:intergenic 50.0%
ACTGTAACCGCCAGACTCAT+TGG - Chr3:99992342-99992361 None:intergenic 50.0%
AGATGGAGACGACGGTGAAA+AGG - Chr3:99991092-99991111 None:intergenic 50.0%
ATTCCGACGGACGTTATCTC+CGG + Chr3:99991027-99991046 MsG0380017719.01.T01:CDS 50.0%
CAATCCTGTGGGATCCAAAG+CGG + Chr3:99993470-99993489 MsG0380017719.01.T01:CDS 50.0%
CACCGCCGTTTATGTAGTGA+CGG - Chr3:99991063-99991082 None:intergenic 50.0%
CAGGCCACATGCTTCAATGA+AGG + Chr3:99992882-99992901 MsG0380017719.01.T01:intron 50.0%
CCTACTGAGCCAACCATCTT+TGG + Chr3:99992947-99992966 MsG0380017719.01.T01:intron 50.0%
GACCGTCACTACATAAACGG+CGG + Chr3:99991058-99991077 MsG0380017719.01.T01:CDS 50.0%
GCAATGGAAGCCAAGTGCTT+GGG + Chr3:99993374-99993393 MsG0380017719.01.T01:CDS 50.0%
GCTTGCACCAAGCAAGAACA+AGG + Chr3:99993330-99993349 MsG0380017719.01.T01:CDS 50.0%
GGCCGAAATTTGCGGTTCTT+TGG + Chr3:99992462-99992481 MsG0380017719.01.T01:intron 50.0%
GTTGCTGGGACCCAAAGAAT+GGG - Chr3:99994059-99994078 None:intergenic 50.0%
TAGTGACGGTCGTGATATGC+CGG - Chr3:99991049-99991068 None:intergenic 50.0%
TCAAATGGAAGGTTCGCCAC+CGG + Chr3:99993677-99993696 MsG0380017719.01.T01:CDS 50.0%
TCCACCACCACCCATAAAAG+CGG - Chr3:99991673-99991692 None:intergenic 50.0%
TGACGTGGATGACAGCATCT+AGG - Chr3:99993785-99993804 None:intergenic 50.0%
TGCAATGGAAGCCAAGTGCT+TGG + Chr3:99993373-99993392 MsG0380017719.01.T01:CDS 50.0%
TGTTGCTGGGACCCAAAGAA+TGG - Chr3:99994060-99994079 None:intergenic 50.0%
TTGCTGGGACCCAAAGAATG+GGG - Chr3:99994058-99994077 None:intergenic 50.0%
TTGTATGCCACCCAAGCACT+TGG - Chr3:99993387-99993406 None:intergenic 50.0%
! CCAAAGATGGTTGGCTCAGT+AGG - Chr3:99992950-99992969 None:intergenic 50.0%
!! CAAGGCTATTTTGGAGGGTC+CGG + Chr3:99993348-99993367 MsG0380017719.01.T01:CDS 50.0%
!! GTTCTTGCTTGGTGCAAGCA+TGG - Chr3:99993329-99993348 None:intergenic 50.0%
!! TATGGATTCGGTTCGGATCG+AGG - Chr3:99990818-99990837 None:intergenic 50.0%
!!! CTCTCTCTTTTTTGGGGGAG+GGG - Chr3:99994028-99994047 None:intergenic 50.0%
!!! GTTAGGGCAGGTTTTGAGGT+TGG + Chr3:99991639-99991658 MsG0380017719.01.T01:CDS 50.0%
!!! TCTCTCTTTTTTGGGGGAGG+GGG - Chr3:99994027-99994046 None:intergenic 50.0%
ACCACCACCCATAAAAGCGG+CGG - Chr3:99991670-99991689 None:intergenic 55.0%
ATGCCGGAGATAACGTCCGT+CGG - Chr3:99991033-99991052 None:intergenic 55.0%
ATGGAAGCCAAGTGCTTGGG+TGG + Chr3:99993377-99993396 MsG0380017719.01.T01:CDS 55.0%
ATGTGGCCTGTCTCGACCAT+GGG - Chr3:99992872-99992891 None:intergenic 55.0%
CAAATGGAAGGTTCGCCACC+GGG + Chr3:99993678-99993697 MsG0380017719.01.T01:CDS 55.0%
CGTCACTACATAAACGGCGG+TGG + Chr3:99991061-99991080 MsG0380017719.01.T01:CDS 55.0%
GAGAGAGAAGACGGTGTCTG+TGG - Chr3:99990848-99990867 None:intergenic 55.0%
TGGAGACGACGGTGAAAAGG+CGG - Chr3:99991089-99991108 None:intergenic 55.0%
TTGGAGGGTCCGGTATGCAA+TGG + Chr3:99993358-99993377 MsG0380017719.01.T01:CDS 55.0%
! AAAAAGCACGTCAGCGTCGG+TGG + Chr3:99991403-99991422 MsG0380017719.01.T01:CDS 55.0%
!!! TTTTTTGGGGGAGGGGGCTA+AGG - Chr3:99994021-99994040 None:intergenic 55.0%
ACCACCCATAAAAGCGGCGG+CGG - Chr3:99991667-99991686 None:intergenic 60.0%
CATGTGGCCTGTCTCGACCA+TGG - Chr3:99992873-99992892 None:intergenic 60.0%
CCTGTCTCGACCATGGGAGT+GGG - Chr3:99992866-99992885 None:intergenic 60.0%
TCCTGTGGGATCCAAAGCGG+TGG + Chr3:99993473-99993492 MsG0380017719.01.T01:CDS 60.0%
TGTGGGATCCAAAGCGGTGG+CGG + Chr3:99993476-99993495 MsG0380017719.01.T01:CDS 60.0%
! CTTGGTGCAAGCATGGCGAC+AGG - Chr3:99993322-99993341 None:intergenic 60.0%
! GGTAGGTTGACCCACTCCCA+TGG + Chr3:99992853-99992872 MsG0380017719.01.T01:intron 60.0%
!! CGGTGGTGGTGGTGATGATG+AGG + Chr3:99991420-99991439 MsG0380017719.01.T01:CDS 60.0%
!!! GCCGCTTTTATGGGTGGTGG+TGG + Chr3:99991669-99991688 MsG0380017719.01.T01:CDS 60.0%
CCCACTCCCATGGTCGAGAC+AGG + Chr3:99992863-99992882 MsG0380017719.01.T01:intron 65.0%
GCCTGTCTCGACCATGGGAG+TGG - Chr3:99992867-99992886 None:intergenic 65.0%
GGGAGGGGGCTAAGGATGAC+GGG - Chr3:99994013-99994032 None:intergenic 65.0%
GGGGAGGGGGCTAAGGATGA+CGG - Chr3:99994014-99994033 None:intergenic 65.0%
! GCCACCGCTTTGGATCCCAC+AGG - Chr3:99993477-99993496 None:intergenic 65.0%
!! AAGCACGTCAGCGTCGGTGG+TGG + Chr3:99991406-99991425 MsG0380017719.01.T01:CDS 65.0%
!!! GCCGCCGCTTTTATGGGTGG+TGG + Chr3:99991666-99991685 MsG0380017719.01.T01:CDS 65.0%
!!! GGTGCCGCCGCCGCTTTTAT+GGG + Chr3:99991660-99991679 MsG0380017719.01.T01:CDS 65.0%
!!! TGGTGCCGCCGCCGCTTTTA+TGG + Chr3:99991659-99991678 MsG0380017719.01.T01:CDS 65.0%
!! CACGTCAGCGTCGGTGGTGG+TGG + Chr3:99991409-99991428 MsG0380017719.01.T01:CDS 70.0%
!!! GCCGCCGCCGCTTTTATGGG+TGG + Chr3:99991663-99991682 MsG0380017719.01.T01:CDS 70.0%
!! GTAGGGCGCCGCCACCGCTT+TGG - Chr3:99993487-99993506 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 99990738 99994138 99990738 ID=MsG0380017719.01;Name=MsG0380017719.01
Chr3 mRNA 99990738 99994138 99990738 ID=MsG0380017719.01.T01;Parent=MsG0380017719.01;Name=MsG0380017719.01.T01;_AED=0.27;_eAED=0.27;_QI=281|1|1|1|1|1|3|329|440
Chr3 exon 99990738 99991920 99990738 ID=MsG0380017719.01.T01:exon:2711;Parent=MsG0380017719.01.T01
Chr3 exon 99993303 99993552 99993303 ID=MsG0380017719.01.T01:exon:2712;Parent=MsG0380017719.01.T01
Chr3 exon 99993639 99994138 99993639 ID=MsG0380017719.01.T01:exon:2713;Parent=MsG0380017719.01.T01
Chr3 five_prime_UTR 99990738 99991018 99990738 ID=MsG0380017719.01.T01:five_prime_utr;Parent=MsG0380017719.01.T01
Chr3 CDS 99991019 99991920 99991019 ID=MsG0380017719.01.T01:cds;Parent=MsG0380017719.01.T01
Chr3 CDS 99993303 99993552 99993303 ID=MsG0380017719.01.T01:cds;Parent=MsG0380017719.01.T01
Chr3 CDS 99993639 99993809 99993639 ID=MsG0380017719.01.T01:cds;Parent=MsG0380017719.01.T01
Chr3 three_prime_UTR 99993810 99994138 99993810 ID=MsG0380017719.01.T01:three_prime_utr;Parent=MsG0380017719.01.T01
Gene Sequence

>MsG0380017719.01.T01

ATGGCGTCATTCCGACGGACGTTATCTCCGGCATATCACGACCGTCACTACATAAACGGCGGTGGTGCCGCCTTTTCACCGTCGTCTCCATCTCACAAACTTCCATCTTCAAACGGAAACTACTCTGCAATAGCTTCGTCGTTTCAGAGATTAATCGGTGGCGTTTTCATGCGACGATACAATCGAAAGGGACAATGGCGAAAAGTTGCTTTCAGGTGCGTTCTCTGTTTCTTCGTTGGGTTTTTATTAGGTATGTTCCCTTTCGGTAATCTCATTCATGAAATTCCTCAACAACATCGTGAAAACAACAACAATATCATTGCTTTTGATATCAATAAAACTCCACAATCTGATGCCAAATCAATTCTCAATAATCGCGTTTTGAAAAAGCACGTCAGCGTCGGTGGTGGTGGTGATGATGAGGATAAGGATAAGAAGAGTAAGGGTTTTTTGATTGAACAAGTAAGTTTGAGCTCAAACATGAACGCTGAGAAGGATAATGAAAAGCTGAAAGAGAGGGAATTGATCGAATCTGAGAAAATTGATATTGTGGCGAGGAAGCAATTGATTATTGTGACACCGACTTATAACCGCGCTTTTCAGTCATATTTTTTGAATAGGTTAGGGCAGGTTTTGAGGTTGGTGCCGCCGCCGCTTTTATGGGTGGTGGTGGAAATGAATTCTGCTTCTATGGAAACTGCTGAATTGTTGAGAAAAACGGGTGTGATGTATAGGCATTTGGTGTGTACTAAGAATTCAACGGATGTGAAGGATAGAGGAGTTCATCAGAGGAATAAAGCATTGGAGCATATTGAACATCATAAACTTGATGGGATTGTTTACTTTGCTGATGATGATAATGTATATTCTCTTGAATTGTTTCAGACAATCAGAGATATCAGTCGTTTTGGCACTTGGCCTGTCGCCATGCTTGCACCAAGCAAGAACAAGGCTATTTTGGAGGGTCCGGTATGCAATGGAAGCCAAGTGCTTGGGTGGCATACAAATGAGAAAAGTAAAAGACTTCGAAGATTTCATGTTGATATGTCTGGGTTTGCATTCAACAGCACAATCCTGTGGGATCCAAAGCGGTGGCGGCGCCCTACTTCAAATCCTATACGGCAATTAGACTCAGTGAAAGAGGGTTTTCAGGAGACCACCTTTATTGAACAATTGGTGGAAGATGAGAGTCAAATGGAAGGTTCGCCACCGGGTTGCAAGAAAATAATGAATTGGCATCTTCATTTGAATGTTCATAATATAGTTTATCCAAAGGGTTGGATGCTTGAGAAAAACCTAGATGCTGTCATCCACGTCAAGTAA

Protein sequence

>MsG0380017719.01.T01

MASFRRTLSPAYHDRHYINGGGAAFSPSSPSHKLPSSNGNYSAIASSFQRLIGGVFMRRYNRKGQWRKVAFRCVLCFFVGFLLGMFPFGNLIHEIPQQHRENNNNIIAFDINKTPQSDAKSILNNRVLKKHVSVGGGGDDEDKDKKSKGFLIEQVSLSSNMNAEKDNEKLKERELIESEKIDIVARKQLIIVTPTYNRAFQSYFLNRLGQVLRLVPPPLLWVVVEMNSASMETAELLRKTGVMYRHLVCTKNSTDVKDRGVHQRNKALEHIEHHKLDGIVYFADDDNVYSLELFQTIRDISRFGTWPVAMLAPSKNKAILEGPVCNGSQVLGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTSNPIRQLDSVKEGFQETTFIEQLVEDESQMEGSPPGCKKIMNWHLHLNVHNIVYPKGWMLEKNLDAVIHVK*