Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008758.01.T01 | XP_003595594.1 | 92.647 | 68 | 5 | 0 | 1 | 68 | 1 | 68 | 1.65E-34 | 132 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008758.01.T01 | Q6ZLP5 | 70.175 | 57 | 17 | 0 | 12 | 68 | 2 | 58 | 1.11E-21 | 89.4 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008758.01.T01 | G7IIY1 | 92.647 | 68 | 5 | 0 | 1 | 68 | 1 | 68 | 7.90e-35 | 132 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048058.01 | MsG0280008758.01 | 0.807397 | 5.155815e-50 | 2.868767e-47 |
MsG0080048383.01 | MsG0280008758.01 | 0.836692 | 8.063445e-57 | 1.023949e-53 |
MsG0080049135.01 | MsG0280008758.01 | 0.824176 | 9.301936e-54 | 8.177990e-51 |
MsG0180000001.01 | MsG0280008758.01 | 0.810503 | 1.115994e-50 | 6.738620e-48 |
MsG0180000332.01 | MsG0280008758.01 | 0.803300 | 3.722818e-49 | 1.864115e-46 |
MsG0180000611.01 | MsG0280008758.01 | 0.808244 | 3.407122e-50 | 1.938273e-47 |
MsG0180001599.01 | MsG0280008758.01 | 0.810688 | 1.018066e-50 | 6.177928e-48 |
MsG0180002664.01 | MsG0280008758.01 | 0.820088 | 8.252179e-53 | 6.467097e-50 |
MsG0180003031.01 | MsG0280008758.01 | 0.804502 | 2.094600e-49 | 1.081724e-46 |
MsG0180003181.01 | MsG0280008758.01 | 0.828827 | 7.239448e-55 | 7.277230e-52 |
MsG0180003303.01 | MsG0280008758.01 | 0.808039 | 3.766459e-50 | 2.131006e-47 |
MsG0180003379.01 | MsG0280008758.01 | 0.807521 | 4.852650e-50 | 2.708779e-47 |
MsG0180003744.01 | MsG0280008758.01 | 0.842444 | 2.576014e-58 | 3.907032e-55 |
MsG0180004050.01 | MsG0280008758.01 | 0.817136 | 3.856859e-52 | 2.785623e-49 |
MsG0180004056.01 | MsG0280008758.01 | 0.833349 | 5.612233e-56 | 6.446558e-53 |
MsG0180004645.01 | MsG0280008758.01 | 0.806859 | 6.704181e-50 | 3.678461e-47 |
MsG0180004767.01 | MsG0280008758.01 | 0.804571 | 2.026338e-49 | 1.048373e-46 |
MsG0180004861.01 | MsG0280008758.01 | 0.829353 | 5.397647e-55 | 5.511360e-52 |
MsG0180005407.01 | MsG0280008758.01 | 0.841422 | 4.798110e-58 | 7.047228e-55 |
MsG0180005765.01 | MsG0280008758.01 | 0.832947 | 7.066324e-56 | 8.019085e-53 |
MsG0180006050.01 | MsG0280008758.01 | 0.808369 | 3.203821e-50 | 1.828642e-47 |
MsG0180006098.01 | MsG0280008758.01 | 0.849733 | 2.674468e-60 | 5.118885e-57 |
MsG0280006679.01 | MsG0280008758.01 | 0.830405 | 2.991190e-55 | 3.148460e-52 |
MsG0280007109.01 | MsG0280008758.01 | 0.826905 | 2.098946e-54 | 1.995125e-51 |
MsG0280007440.01 | MsG0280008758.01 | 0.802241 | 6.160555e-49 | 3.002614e-46 |
MsG0280007775.01 | MsG0280008758.01 | 0.812338 | 4.458243e-51 | 2.827151e-48 |
MsG0280007847.01 | MsG0280008758.01 | 0.801493 | 8.773019e-49 | 4.195548e-46 |
MsG0280007948.01 | MsG0280008758.01 | 0.821300 | 4.344916e-53 | 3.521237e-50 |
MsG0280008041.01 | MsG0280008758.01 | 0.832598 | 8.625820e-56 | 9.687393e-53 |
MsG0280008234.01 | MsG0280008758.01 | 0.827757 | 1.311193e-54 | 1.277574e-51 |
MsG0280008502.01 | MsG0280008758.01 | 0.808722 | 2.693158e-50 | 1.551250e-47 |
MsG0280008518.01 | MsG0280008758.01 | 0.802055 | 6.728230e-49 | 3.263802e-46 |
MsG0280008756.01 | MsG0280008758.01 | 0.859503 | 3.953831e-63 | 1.046499e-59 |
MsG0280008758.01 | MsG0280009575.01 | 0.827823 | 1.264281e-54 | 1.234250e-51 |
MsG0280008758.01 | MsG0280010447.01 | 0.821721 | 3.472279e-53 | 2.847526e-50 |
MsG0280008758.01 | MsG0280010448.01 | 0.818948 | 1.501653e-52 | 1.140109e-49 |
MsG0280008758.01 | MsG0280010567.01 | 0.830225 | 3.309884e-55 | 3.466078e-52 |
MsG0280008758.01 | MsG0280011307.01 | 0.836648 | 8.275871e-57 | 1.049397e-53 |
MsG0280008758.01 | MsG0380011927.01 | 0.809049 | 2.292287e-50 | 1.331970e-47 |
MsG0280008758.01 | MsG0380013085.01 | 0.801803 | 7.577546e-49 | 3.652339e-46 |
MsG0280008758.01 | MsG0380014489.01 | 0.824158 | 9.390261e-54 | 8.251570e-51 |
MsG0280008758.01 | MsG0380014539.01 | 0.806967 | 6.360008e-50 | 3.499338e-47 |
MsG0280008758.01 | MsG0380014541.01 | 0.856934 | 2.299998e-62 | 5.580128e-59 |
MsG0280008758.01 | MsG0380015512.01 | 0.820148 | 7.992762e-53 | 6.274132e-50 |
MsG0280008758.01 | MsG0380015564.01 | 0.803543 | 3.316165e-49 | 1.671019e-46 |
MsG0280008758.01 | MsG0380015607.01 | 0.832500 | 9.122769e-56 | 1.021583e-52 |
MsG0280008758.01 | MsG0380016513.01 | 0.803981 | 2.689631e-49 | 1.370651e-46 |
MsG0280008758.01 | MsG0380016604.01 | 0.833633 | 4.766776e-56 | 5.521465e-53 |
MsG0280008758.01 | MsG0380017719.01 | 0.847073 | 1.456530e-59 | 2.558886e-56 |
MsG0280008758.01 | MsG0380017797.01 | 0.813852 | 2.075394e-51 | 1.370584e-48 |
MsG0280008758.01 | MsG0380018033.01 | 0.818886 | 1.551331e-52 | 1.175735e-49 |
MsG0280008758.01 | MsG0480018235.01 | 0.809815 | 1.569937e-50 | 9.310401e-48 |
MsG0280008758.01 | MsG0480018462.01 | 0.820849 | 5.519955e-53 | 4.417949e-50 |
MsG0280008758.01 | MsG0480018479.01 | 0.817953 | 2.523164e-52 | 1.863605e-49 |
MsG0280008758.01 | MsG0480020144.01 | 0.813237 | 2.833251e-51 | 1.839997e-48 |
MsG0280008758.01 | MsG0480020331.01 | 0.813252 | 2.812475e-51 | 1.827280e-48 |
MsG0280008758.01 | MsG0480020416.01 | 0.808418 | 3.128038e-50 | 1.787628e-47 |
MsG0280008758.01 | MsG0480020675.01 | 0.813606 | 2.351052e-51 | 1.542371e-48 |
MsG0280008758.01 | MsG0480021240.01 | 0.813915 | 2.009791e-51 | 1.329522e-48 |
MsG0280008758.01 | MsG0480021432.01 | 0.835100 | 2.042479e-56 | 2.472160e-53 |
MsG0280008758.01 | MsG0480021772.01 | 0.818102 | 2.335895e-52 | 1.732279e-49 |
MsG0280008758.01 | MsG0480022026.01 | 0.808289 | 3.331761e-50 | 1.897654e-47 |
MsG0280008758.01 | MsG0480022678.01 | 0.825495 | 4.545020e-54 | 4.149301e-51 |
MsG0280008758.01 | MsG0480022717.01 | 0.805711 | 1.170195e-49 | 6.234826e-47 |
MsG0280008758.01 | MsG0480022960.01 | 0.804554 | 2.043040e-49 | 1.056536e-46 |
MsG0280008758.01 | MsG0480023240.01 | 0.821754 | 3.413092e-53 | 2.801448e-50 |
MsG0280008758.01 | MsG0580024536.01 | 0.811597 | 6.467123e-51 | 4.019742e-48 |
MsG0280008758.01 | MsG0580024618.01 | 0.829161 | 6.010325e-55 | 6.101799e-52 |
MsG0280008758.01 | MsG0580024727.01 | 0.821555 | 3.793979e-53 | 3.096771e-50 |
MsG0280008758.01 | MsG0580024819.01 | 0.803962 | 2.714189e-49 | 1.382468e-46 |
MsG0280008758.01 | MsG0580025439.01 | 0.802334 | 5.892749e-49 | 2.879026e-46 |
MsG0280008758.01 | MsG0580025922.01 | 0.805684 | 1.185451e-49 | 6.311740e-47 |
MsG0280008758.01 | MsG0580026225.01 | 0.831753 | 1.396301e-55 | 1.529625e-52 |
MsG0280008758.01 | MsG0580029628.01 | 0.802113 | 6.545248e-49 | 3.179638e-46 |
MsG0280008758.01 | MsG0580029658.01 | 0.858179 | 9.837808e-63 | 2.489100e-59 |
MsG0280008758.01 | MsG0580029661.01 | 0.802938 | 4.423510e-49 | 2.194588e-46 |
MsG0280008758.01 | MsG0580029801.01 | 0.818868 | 1.565647e-52 | 1.185987e-49 |
MsG0280008758.01 | MsG0580030003.01 | 0.830465 | 2.891912e-55 | 3.048981e-52 |
MsG0280008758.01 | MsG0580030249.01 | 0.810476 | 1.130854e-50 | 6.823587e-48 |
MsG0280008758.01 | MsG0680030841.01 | 0.805681 | 1.187291e-49 | 6.320927e-47 |
MsG0280008758.01 | MsG0680031145.01 | 0.804134 | 2.498937e-49 | 1.278438e-46 |
MsG0280008758.01 | MsG0680031301.01 | 0.834276 | 3.290535e-56 | 3.886258e-53 |
MsG0280008758.01 | MsG0680031828.01 | 0.856955 | 2.266654e-62 | 5.503570e-59 |
MsG0280008758.01 | MsG0680032075.01 | 0.820309 | 7.342000e-53 | 5.788638e-50 |
MsG0280008758.01 | MsG0680034269.01 | 0.803164 | 3.972293e-49 | 1.982199e-46 |
MsG0280008758.01 | MsG0680035306.01 | 0.802397 | 5.720408e-49 | 2.799332e-46 |
MsG0280008758.01 | MsG0680035476.01 | 0.863934 | 1.746321e-64 | 5.386848e-61 |
MsG0280008758.01 | MsG0780036845.01 | 0.821122 | 4.775135e-53 | 3.851011e-50 |
MsG0280008758.01 | MsG0780039340.01 | 0.817725 | 2.841534e-52 | 2.085768e-49 |
MsG0280008758.01 | MsG0780039442.01 | 0.804397 | 2.202946e-49 | 1.134616e-46 |
MsG0280008758.01 | MsG0780040208.01 | 0.800253 | 1.571721e-48 | 7.284100e-46 |
MsG0280008758.01 | MsG0780040312.01 | 0.819079 | 1.402113e-52 | 1.068241e-49 |
MsG0280008758.01 | MsG0780040411.01 | 0.813462 | 2.528502e-51 | 1.652420e-48 |
MsG0280008758.01 | MsG0780040424.01 | 0.802092 | 6.610311e-49 | 3.209640e-46 |
MsG0280008758.01 | MsG0780040597.01 | 0.809832 | 1.557191e-50 | 9.238784e-48 |
MsG0280008758.01 | MsG0780040697.01 | 0.810120 | 1.350165e-50 | 8.071086e-48 |
MsG0280008758.01 | MsG0780040845.01 | 0.822310 | 2.536420e-53 | 2.115314e-50 |
MsG0280008758.01 | MsG0780041210.01 | 0.801493 | 8.773002e-49 | 4.195543e-46 |
MsG0280008758.01 | MsG0880042033.01 | 0.813226 | 2.849615e-51 | 1.850077e-48 |
MsG0280008758.01 | MsG0880042206.01 | 0.813499 | 2.481463e-51 | 1.623262e-48 |
MsG0280008758.01 | MsG0880042399.01 | -0.812438 | 4.238739e-51 | 2.695304e-48 |
MsG0280008758.01 | MsG0880042760.01 | 0.815552 | 8.720242e-52 | 6.031005e-49 |
MsG0280008758.01 | MsG0880043162.01 | 0.809979 | 1.447896e-50 | 8.623611e-48 |
MsG0280008758.01 | MsG0880043532.01 | 0.803969 | 2.704339e-49 | 1.377705e-46 |
MsG0280008758.01 | MsG0880044075.01 | 0.820661 | 6.097494e-53 | 4.854098e-50 |
MsG0280008758.01 | MsG0880044990.01 | 0.817267 | 3.603858e-52 | 2.612079e-49 |
MsG0280008758.01 | MsG0880045393.01 | 0.809616 | 1.732788e-50 | 1.022297e-47 |
MsG0280008758.01 | MsG0880045656.01 | 0.837962 | 3.812682e-57 | 5.033433e-54 |
MsG0280008758.01 | MsG0880045754.01 | 0.809727 | 1.639844e-50 | 9.702634e-48 |
MsG0280008758.01 | MsG0880045869.01 | 0.808073 | 3.705029e-50 | 2.098150e-47 |
MsG0280008758.01 | MsG0880045951.01 | 0.816804 | 4.578450e-52 | 3.276803e-49 |
MsG0280008758.01 | MsG0880046047.01 | 0.831750 | 1.398770e-55 | 1.532193e-52 |
MsG0280008758.01 | MsG0880046068.01 | 0.843853 | 1.085493e-58 | 1.720789e-55 |
MsG0280008758.01 | MsG0880046113.01 | 0.812660 | 3.791404e-51 | 2.424763e-48 |
MsG0280008758.01 | MsG0880046535.01 | 0.812493 | 4.124213e-51 | 2.626115e-48 |
MsG0280008758.01 | MsG0880046684.01 | 0.821095 | 4.842955e-53 | 3.902869e-50 |
MsG0280008758.01 | MsG0880046901.01 | 0.817576 | 3.070025e-52 | 2.244166e-49 |
MsG0280008758.01 | MsG0880047391.01 | 0.807845 | 4.142168e-50 | 2.331647e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008758.01.T01 | MTR_2g049790 | 92.647 | 68 | 5 | 0 | 1 | 68 | 1 | 68 | 2.00e-38 | 132 |
MsG0280008758.01.T01 | MTR_5g088350 | 67.308 | 52 | 17 | 0 | 17 | 68 | 7 | 58 | 3.63e-19 | 79.0 |
MsG0280008758.01.T01 | MTR_5g088350 | 67.308 | 52 | 17 | 0 | 17 | 68 | 7 | 58 | 6.99e-19 | 79.0 |
MsG0280008758.01.T01 | MTR_4g114670 | 63.462 | 52 | 19 | 0 | 17 | 68 | 5 | 56 | 3.29e-18 | 76.6 |
MsG0280008758.01.T01 | MTR_4g114670 | 63.462 | 52 | 19 | 0 | 17 | 68 | 5 | 56 | 3.59e-18 | 77.0 |
MsG0280008758.01.T01 | MTR_5g088350 | 67.308 | 52 | 17 | 0 | 17 | 68 | 7 | 58 | 3.64e-18 | 76.6 |
MsG0280008758.01.T01 | MTR_4g114670 | 63.462 | 52 | 19 | 0 | 17 | 68 | 5 | 56 | 3.88e-18 | 76.6 |
MsG0280008758.01.T01 | MTR_8g024590 | 58.929 | 56 | 23 | 0 | 13 | 68 | 7 | 62 | 4.99e-18 | 76.3 |
MsG0280008758.01.T01 | MTR_5g067150 | 66.000 | 50 | 17 | 0 | 19 | 68 | 5 | 54 | 5.30e-18 | 76.3 |
MsG0280008758.01.T01 | MTR_5g067150 | 66.000 | 50 | 17 | 0 | 19 | 68 | 5 | 54 | 9.03e-18 | 75.5 |
MsG0280008758.01.T01 | MTR_5g067150 | 66.000 | 50 | 17 | 0 | 19 | 68 | 5 | 54 | 1.32e-17 | 75.1 |
MsG0280008758.01.T01 | MTR_8g024600 | 61.538 | 52 | 20 | 0 | 17 | 68 | 11 | 62 | 1.69e-17 | 75.1 |
MsG0280008758.01.T01 | MTR_1g103760 | 54.717 | 53 | 24 | 0 | 16 | 68 | 5 | 57 | 1.00e-12 | 61.6 |
MsG0280008758.01.T01 | MTR_4g128820 | 54.000 | 50 | 23 | 0 | 21 | 70 | 8 | 57 | 2.28e-12 | 60.5 |
MsG0280008758.01.T01 | MTR_3g072320 | 50.000 | 52 | 26 | 0 | 16 | 67 | 5 | 56 | 2.15e-11 | 57.8 |
MsG0280008758.01.T01 | MTR_2g045470 | 58.696 | 46 | 19 | 0 | 15 | 60 | 12 | 57 | 2.48e-11 | 57.4 |
MsG0280008758.01.T01 | MTR_4g131060 | 56.250 | 48 | 21 | 0 | 21 | 68 | 16 | 63 | 3.15e-11 | 57.0 |
MsG0280008758.01.T01 | MTR_7g072575 | 50.943 | 53 | 26 | 0 | 16 | 68 | 5 | 57 | 6.77e-11 | 56.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008758.01.T01 | AT1G30270 | 77.551 | 49 | 11 | 0 | 20 | 68 | 28 | 76 | 9.73e-21 | 84.3 |
MsG0280008758.01.T01 | AT1G30270 | 77.551 | 49 | 11 | 0 | 20 | 68 | 28 | 76 | 1.07e-20 | 84.0 |
MsG0280008758.01.T01 | AT2G26980 | 69.231 | 52 | 16 | 0 | 17 | 68 | 8 | 59 | 3.57e-20 | 80.9 |
MsG0280008758.01.T01 | AT2G26980 | 69.231 | 52 | 16 | 0 | 17 | 68 | 8 | 59 | 2.20e-19 | 80.1 |
MsG0280008758.01.T01 | AT2G26980 | 69.231 | 52 | 16 | 0 | 17 | 68 | 8 | 59 | 2.48e-19 | 80.1 |
MsG0280008758.01.T01 | AT2G26980 | 69.231 | 52 | 16 | 0 | 17 | 68 | 8 | 59 | 6.59e-19 | 79.0 |
MsG0280008758.01.T01 | AT2G26980 | 69.231 | 52 | 16 | 0 | 17 | 68 | 18 | 69 | 6.84e-19 | 79.0 |
MsG0280008758.01.T01 | AT1G01140 | 53.968 | 63 | 29 | 0 | 6 | 68 | 2 | 64 | 8.69e-19 | 78.6 |
MsG0280008758.01.T01 | AT1G01140 | 53.968 | 63 | 29 | 0 | 6 | 68 | 2 | 64 | 8.93e-19 | 78.6 |
MsG0280008758.01.T01 | AT1G01140 | 53.968 | 63 | 29 | 0 | 6 | 68 | 2 | 64 | 9.07e-19 | 78.6 |
MsG0280008758.01.T01 | AT4G24400 | 64.000 | 50 | 18 | 0 | 19 | 68 | 5 | 54 | 5.83e-17 | 73.6 |
MsG0280008758.01.T01 | AT5G35410 | 64.000 | 50 | 18 | 0 | 19 | 68 | 7 | 56 | 7.01e-17 | 73.2 |
MsG0280008758.01.T01 | AT5G35410 | 64.000 | 50 | 18 | 0 | 19 | 68 | 7 | 56 | 7.61e-17 | 73.2 |
MsG0280008758.01.T01 | AT4G24400 | 64.000 | 50 | 18 | 0 | 19 | 68 | 5 | 54 | 8.74e-17 | 72.8 |
MsG0280008758.01.T01 | AT5G21326 | 64.000 | 50 | 18 | 0 | 19 | 68 | 9 | 58 | 1.96e-16 | 72.0 |
MsG0280008758.01.T01 | AT5G21222 | 57.692 | 52 | 22 | 0 | 17 | 68 | 7 | 58 | 1.03e-13 | 64.3 |
MsG0280008758.01.T01 | AT5G21222 | 57.692 | 52 | 22 | 0 | 17 | 68 | 7 | 58 | 1.03e-13 | 64.3 |
MsG0280008758.01.T01 | AT5G21222 | 57.692 | 52 | 22 | 0 | 17 | 68 | 7 | 58 | 1.03e-13 | 64.3 |
MsG0280008758.01.T01 | AT5G21222 | 57.692 | 52 | 22 | 0 | 17 | 68 | 7 | 58 | 1.03e-13 | 64.3 |
MsG0280008758.01.T01 | AT5G01810 | 59.574 | 47 | 19 | 0 | 22 | 68 | 11 | 57 | 6.02e-13 | 62.0 |
MsG0280008758.01.T01 | AT5G01810 | 59.574 | 47 | 19 | 0 | 22 | 68 | 11 | 57 | 6.02e-13 | 62.0 |
MsG0280008758.01.T01 | AT5G01810 | 59.574 | 47 | 19 | 0 | 22 | 68 | 11 | 57 | 6.25e-13 | 62.0 |
MsG0280008758.01.T01 | AT1G29230 | 54.167 | 48 | 22 | 0 | 21 | 68 | 72 | 119 | 8.88e-13 | 61.6 |
MsG0280008758.01.T01 | AT5G45810 | 56.250 | 48 | 21 | 0 | 21 | 68 | 26 | 73 | 2.07e-12 | 60.5 |
MsG0280008758.01.T01 | AT4G18700 | 54.167 | 48 | 22 | 0 | 21 | 68 | 24 | 71 | 6.82e-12 | 59.3 |
MsG0280008758.01.T01 | AT5G45820 | 57.447 | 47 | 20 | 0 | 22 | 68 | 11 | 57 | 8.81e-12 | 58.9 |
MsG0280008758.01.T01 | AT4G14580 | 48.333 | 60 | 27 | 1 | 16 | 71 | 14 | 73 | 1.09e-11 | 58.5 |
MsG0280008758.01.T01 | AT5G57630 | 50.943 | 53 | 26 | 0 | 16 | 68 | 5 | 57 | 1.21e-11 | 58.5 |
MsG0280008758.01.T01 | AT5G57630 | 50.943 | 53 | 26 | 0 | 16 | 68 | 5 | 57 | 1.41e-11 | 58.2 |
MsG0280008758.01.T01 | AT3G23000 | 35.616 | 73 | 43 | 1 | 3 | 71 | 5 | 77 | 1.69e-11 | 58.2 |
MsG0280008758.01.T01 | AT3G01090 | 46.970 | 66 | 35 | 0 | 3 | 68 | 22 | 87 | 2.30e-11 | 57.8 |
MsG0280008758.01.T01 | AT3G17510 | 63.415 | 41 | 15 | 0 | 19 | 59 | 16 | 56 | 3.47e-11 | 57.0 |
MsG0280008758.01.T01 | AT2G34180 | 60.000 | 40 | 16 | 0 | 22 | 61 | 56 | 95 | 6.40e-11 | 56.2 |
MsG0280008758.01.T01 | AT3G29160 | 48.387 | 62 | 32 | 0 | 7 | 68 | 4 | 65 | 8.18e-11 | 56.2 |
MsG0280008758.01.T01 | AT3G29160 | 48.387 | 62 | 32 | 0 | 7 | 68 | 4 | 65 | 8.18e-11 | 56.2 |
Find 15 sgRNAs with CRISPR-Local
Find 15 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGCATAAAATGATTCGTC+AGG | 0.448170 | 2:-37758167 | MsG0280008758.01.T01:CDS |
CAACGGCGGACGTGCGAAGG+CGG | 0.465088 | 2:-37758308 | MsG0280008758.01.T01:CDS |
CAGCAACGGCGGACGTGCGA+AGG | 0.469154 | 2:-37758311 | MsG0280008758.01.T01:CDS |
TATGAGCTGGGTAGGACGTT+AGG | 0.472521 | 2:-37758280 | MsG0280008758.01.T01:CDS |
TTTGCGAGACATGTTGAAAC+TGG | 0.475203 | 2:-37758232 | MsG0280008758.01.T01:CDS |
AGCAACGGAGGCAGCAGCAA+CGG | 0.481688 | 2:-37758325 | MsG0280008758.01.T01:CDS |
AACGGCGGACGTGCGAAGGC+GGG | 0.484040 | 2:-37758307 | MsG0280008758.01.T01:CDS |
CGGGAAAGTATGAGCTGGGT+AGG | 0.549445 | 2:-37758288 | MsG0280008758.01.T01:CDS |
GAAGGCGGGAAAGTATGAGC+TGG | 0.568172 | 2:-37758293 | MsG0280008758.01.T01:CDS |
AACGGAGGCAGCAGCAACGG+CGG | 0.578341 | 2:-37758322 | MsG0280008758.01.T01:CDS |
AAGGCGGGAAAGTATGAGCT+GGG | 0.606003 | 2:-37758292 | MsG0280008758.01.T01:CDS |
CTGGGTAGGACGTTAGGTGA+AGG | 0.611905 | 2:-37758274 | MsG0280008758.01.T01:CDS |
AGGTGAAGGTAATTTCGCGA+AGG | 0.640213 | 2:-37758260 | MsG0280008758.01.T01:CDS |
TCACGTTCATCGAATAGCAA+CGG | 0.671573 | 2:-37758340 | MsG0280008758.01.T01:CDS |
CGTTCATCGAATAGCAACGG+AGG | 0.695102 | 2:-37758337 | MsG0280008758.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CAAGCATAAAATGATTCGTC+AGG | - | Chr2:37758329-37758348 | MsG0280008758.01.T01:CDS | 35.0% | |
TCACGTTCATCGAATAGCAA+CGG | - | Chr2:37758156-37758175 | MsG0280008758.01.T01:CDS | 40.0% | |
TTTGCGAGACATGTTGAAAC+TGG | - | Chr2:37758264-37758283 | MsG0280008758.01.T01:CDS | 40.0% | |
AGGTGAAGGTAATTTCGCGA+AGG | - | Chr2:37758236-37758255 | MsG0280008758.01.T01:CDS | 45.0% | |
CGTTCATCGAATAGCAACGG+AGG | - | Chr2:37758159-37758178 | MsG0280008758.01.T01:CDS | 50.0% | |
TATGAGCTGGGTAGGACGTT+AGG | - | Chr2:37758216-37758235 | MsG0280008758.01.T01:CDS | 50.0% | |
! | AAGGCGGGAAAGTATGAGCT+GGG | - | Chr2:37758204-37758223 | MsG0280008758.01.T01:CDS | 50.0% |
CTGGGTAGGACGTTAGGTGA+AGG | - | Chr2:37758222-37758241 | MsG0280008758.01.T01:CDS | 55.0% | |
! | CGGGAAAGTATGAGCTGGGT+AGG | - | Chr2:37758208-37758227 | MsG0280008758.01.T01:CDS | 55.0% |
! | GAAGGCGGGAAAGTATGAGC+TGG | - | Chr2:37758203-37758222 | MsG0280008758.01.T01:CDS | 55.0% |
AGCAACGGAGGCAGCAGCAA+CGG | - | Chr2:37758171-37758190 | MsG0280008758.01.T01:CDS | 60.0% | |
AACGGAGGCAGCAGCAACGG+CGG | - | Chr2:37758174-37758193 | MsG0280008758.01.T01:CDS | 65.0% | |
AACGGCGGACGTGCGAAGGC+GGG | - | Chr2:37758189-37758208 | MsG0280008758.01.T01:CDS | 70.0% | |
CAACGGCGGACGTGCGAAGG+CGG | - | Chr2:37758188-37758207 | MsG0280008758.01.T01:CDS | 70.0% | |
CAGCAACGGCGGACGTGCGA+AGG | - | Chr2:37758185-37758204 | MsG0280008758.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 37758150 | 37758368 | 37758150 | ID=MsG0280008758.01;Name=MsG0280008758.01 |
Chr2 | mRNA | 37758150 | 37758368 | 37758150 | ID=MsG0280008758.01.T01;Parent=MsG0280008758.01;Name=MsG0280008758.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|72 |
Chr2 | exon | 37758150 | 37758368 | 37758150 | ID=MsG0280008758.01.T01:exon:9764;Parent=MsG0280008758.01.T01 |
Chr2 | CDS | 37758150 | 37758368 | 37758150 | ID=MsG0280008758.01.T01:cds;Parent=MsG0280008758.01.T01 |
Gene Sequence |
Protein sequence |