AlfalfaGEDB | MsG0280009986.01

M. sativa cultivar ZhongmuNo.1 / MsG0280009986.01

KEGG: -
GO: GO:0003700 GO:0006355 GO:0043565
PFAM: PF03106

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009986.01.T01	AES66556.2	77.049	183	32	2	26	203	5	182	3.90E-94	283

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009986.01.T01	Q8GWF1	56	75	32	1	37	110	97	171	6.49E-22	94

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009986.01.T01	G7ITD8	77.049	183	32	2	26	203	5	182	1.86e-94	283

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047869.01	MsG0280009986.01	0.805453	1.324951e-49	7.012606e-47
MsG0080047925.01	MsG0280009986.01	0.812314	4.513402e-51	2.860190e-48
MsG0080048431.01	MsG0280009986.01	0.805503	1.293753e-49	6.855898e-47
MsG0180001410.01	MsG0280009986.01	0.804807	1.808945e-49	9.416877e-47
MsG0180002008.01	MsG0280009986.01	0.806444	8.201735e-50	4.452381e-47
MsG0180002195.01	MsG0280009986.01	0.822092	2.850565e-53	2.362321e-50
MsG0180002518.01	MsG0280009986.01	0.814233	1.709888e-51	1.140977e-48
MsG0180004114.01	MsG0280009986.01	0.804149	2.481513e-49	1.270019e-46
MsG0180004264.01	MsG0280009986.01	0.808937	2.423309e-50	1.403796e-47
MsG0180005705.01	MsG0280009986.01	0.825162	5.448006e-54	4.927202e-51
MsG0280009248.01	MsG0280009986.01	0.800130	1.665174e-48	7.693121e-46
MsG0280009986.01	MsG0380012403.01	0.806725	7.155099e-50	3.912227e-47
MsG0280009986.01	MsG0380013883.01	0.853371	2.497708e-61	5.384749e-58
MsG0280009986.01	MsG0380013896.01	0.825766	3.920135e-54	3.606778e-51
MsG0280009986.01	MsG0380014894.01	0.806713	7.196337e-50	3.933529e-47
MsG0280009986.01	MsG0480019722.01	0.801258	9.803321e-49	4.660481e-46
MsG0280009986.01	MsG0480021276.01	0.801224	9.960383e-49	4.731125e-46
MsG0280009986.01	MsG0580026222.01	0.802970	4.356957e-49	2.163297e-46
MsG0280009986.01	MsG0580027332.01	0.800266	1.562257e-48	7.242747e-46
MsG0280009986.01	MsG0580027833.01	0.804088	2.555426e-49	1.305787e-46
MsG0280009986.01	MsG0580027838.01	0.816368	5.732141e-52	4.054093e-49
MsG0280009986.01	MsG0580028170.01	0.805915	1.059863e-49	5.676532e-47
MsG0280009986.01	MsG0580029381.01	0.801366	9.315270e-49	4.440642e-46
MsG0280009986.01	MsG0680031380.01	0.808583	2.884184e-50	1.655323e-47
MsG0280009986.01	MsG0680034565.01	0.801641	8.182700e-49	3.927727e-46
MsG0280009986.01	MsG0780036134.01	0.823094	1.666147e-53	1.420831e-50
MsG0280009986.01	MsG0780038386.01	0.802004	6.891101e-49	3.338426e-46
MsG0280009986.01	MsG0880044821.01	0.800710	1.268743e-48	5.948158e-46
MsG0280009986.01	MsG0880046505.01	0.810832	9.473033e-51	5.770816e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009986.01.T01	MTR_2g075750	77.049	183	32	2	26	203	5	182	4.73e-98	283
MsG0280009986.01.T01	MTR_2g075610	78.286	175	33	1	34	203	14	188	1.78e-95	276
MsG0280009986.01.T01	MTR_2g075700	52.809	178	72	4	34	202	129	303	2.98e-54	176
MsG0280009986.01.T01	MTR_2g075690	46.629	178	79	4	34	198	126	300	2.97e-43	147
MsG0280009986.01.T01	MTR_2g075680	48.810	168	71	5	34	189	133	297	2.40e-42	145
MsG0280009986.01.T01	MTR_7g073430	45.213	188	77	7	34	216	107	273	9.04e-37	130
MsG0280009986.01.T01	MTR_7g073380	53.097	113	50	2	34	144	108	219	1.33e-35	127
MsG0280009986.01.T01	MTR_8g032510	46.575	146	73	4	34	176	103	246	1.10e-34	125
MsG0280009986.01.T01	MTR_0002s1250	47.500	120	59	3	34	150	96	214	2.45e-31	115
MsG0280009986.01.T01	MTR_8g005750	53.846	104	42	3	34	135	87	186	2.92e-29	110
MsG0280009986.01.T01	MTR_3g093830	48.101	79	41	0	34	112	112	190	3.72e-19	84.3
MsG0280009986.01.T01	MTR_8g099350	55.000	60	27	0	49	108	132	191	6.56e-18	81.3
MsG0280009986.01.T01	MTR_5g067700	42.667	75	42	1	34	108	92	165	8.69e-17	76.6
MsG0280009986.01.T01	MTR_7g117200	50.820	61	30	0	48	108	117	177	3.04e-16	76.3
MsG0280009986.01.T01	MTR_3g090860	50.820	61	30	0	48	108	132	192	3.60e-16	76.3
MsG0280009986.01.T01	MTR_5g067680	51.562	64	31	0	49	112	202	265	8.78e-16	75.5
MsG0280009986.01.T01	MTR_8g027860	48.438	64	33	0	48	111	135	198	5.18e-15	73.2
MsG0280009986.01.T01	MTR_7g079010	41.237	97	52	2	24	120	118	209	1.01e-14	70.9
MsG0280009986.01.T01	MTR_4g094588	46.753	77	36	2	48	122	177	250	1.26e-14	72.0
MsG0280009986.01.T01	MTR_8g092140	50.000	60	27	1	47	106	158	214	2.34e-14	70.1
MsG0280009986.01.T01	MTR_5g042920	36.154	130	64	5	26	155	303	413	2.92e-14	71.2
MsG0280009986.01.T01	MTR_4g082580	41.379	87	48	1	47	133	276	359	3.24e-14	70.9
MsG0280009986.01.T01	MTR_5g091390	49.254	67	29	2	48	112	156	219	1.42e-13	68.6
MsG0280009986.01.T01	MTR_3g095080	48.333	60	28	1	47	106	166	222	1.54e-13	67.8
MsG0280009986.01.T01	MTR_3g095080	40.698	86	42	2	47	132	142	218	1.85e-13	67.4
MsG0280009986.01.T01	MTR_7g109800	52.542	59	25	1	48	106	144	199	2.38e-13	67.8
MsG0280009986.01.T01	MTR_7g100510	44.186	86	44	2	43	128	356	437	3.69e-13	68.2
MsG0280009986.01.T01	MTR_5g043880	50.847	59	26	1	48	106	123	178	3.91e-13	67.0
MsG0280009986.01.T01	MTR_7g028415	48.333	60	28	1	47	106	91	147	6.93e-13	64.7
MsG0280009986.01.T01	MTR_7g028710	48.333	60	28	1	47	106	91	147	6.93e-13	64.7
MsG0280009986.01.T01	MTR_1g086790	50.847	59	26	1	48	106	157	212	8.75e-13	66.6
MsG0280009986.01.T01	MTR_8g007270	47.541	61	29	1	47	107	152	209	1.39e-12	65.1
MsG0280009986.01.T01	MTR_7g011820	39.773	88	44	3	20	107	387	465	1.64e-12	66.2
MsG0280009986.01.T01	MTR_2g105060	40.000	70	40	1	38	107	83	150	3.76e-12	63.9
MsG0280009986.01.T01	MTR_4g122530	47.458	59	28	1	48	106	207	262	4.06e-12	65.1
MsG0280009986.01.T01	MTR_2g105060	40.000	70	40	1	38	107	158	225	4.94e-12	64.3
MsG0280009986.01.T01	MTR_5g094430	38.636	88	50	2	21	107	335	419	1.79e-11	63.2
MsG0280009986.01.T01	MTR_2g033820	47.458	59	28	1	48	106	202	257	2.41e-11	62.8
MsG0280009986.01.T01	MTR_1g064310	75.758	33	8	0	1	33	1	33	2.88e-11	58.2
MsG0280009986.01.T01	MTR_3g056100	45.902	61	30	1	47	107	400	457	3.10e-11	62.4
MsG0280009986.01.T01	MTR_3g056100	45.902	61	30	1	47	107	413	470	3.56e-11	62.4
MsG0280009986.01.T01	MTR_5g094430	38.636	88	50	2	21	107	223	307	3.65e-11	62.4
MsG0280009986.01.T01	MTR_5g094430	45.902	61	30	1	47	107	228	285	3.94e-11	62.0
MsG0280009986.01.T01	MTR_5g016610	41.667	72	40	1	50	121	200	269	4.63e-11	61.2
MsG0280009986.01.T01	MTR_3g056100	45.902	61	30	1	47	107	269	326	5.91e-11	61.6
MsG0280009986.01.T01	MTR_7g062220	51.667	60	26	1	47	106	122	178	5.93e-11	61.2
MsG0280009986.01.T01	MTR_3g056100	45.902	61	30	1	47	107	256	313	6.28e-11	61.6
MsG0280009986.01.T01	MTR_5g073620	43.750	64	36	0	49	112	672	735	6.65e-11	61.6
MsG0280009986.01.T01	MTR_3g095040	45.902	61	30	1	47	107	116	173	7.53e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009986.01.T01	AT5G22570	56.000	75	32	1	37	110	97	171	6.62e-23	94.0
MsG0280009986.01.T01	AT1G66560	54.412	68	31	0	49	116	103	170	4.82e-21	88.2
MsG0280009986.01.T01	AT5G01900	54.545	66	30	0	44	109	105	170	1.28e-20	87.4
MsG0280009986.01.T01	AT1G66600	55.556	63	28	0	48	110	102	164	5.14e-20	85.5
MsG0280009986.01.T01	AT1G66550	52.239	67	32	0	50	116	104	170	5.50e-20	85.5
MsG0280009986.01.T01	AT1G66550	52.239	67	32	0	50	116	109	175	6.84e-20	85.5
MsG0280009986.01.T01	AT3G56400	48.052	77	37	1	34	110	108	181	6.87e-20	85.9
MsG0280009986.01.T01	AT1G80590	52.459	61	29	0	50	110	86	146	3.08e-18	80.5
MsG0280009986.01.T01	AT2G40750	44.318	88	46	1	21	108	127	211	6.45e-18	81.3
MsG0280009986.01.T01	AT5G24110	47.561	82	38	2	48	125	112	192	3.45e-17	79.0
MsG0280009986.01.T01	AT4G11070	34.127	126	73	2	49	164	109	234	5.39e-17	77.8
MsG0280009986.01.T01	AT4G11070	34.127	126	73	2	49	164	141	266	8.58e-17	77.8
MsG0280009986.01.T01	AT2G46400	49.180	61	31	0	48	108	103	163	3.89e-15	73.2
MsG0280009986.01.T01	AT2G40740	46.667	60	32	0	49	108	173	232	6.03e-15	72.4
MsG0280009986.01.T01	AT2G40740	46.667	60	32	0	49	108	182	241	7.30e-15	72.4
MsG0280009986.01.T01	AT4G23810	44.776	67	37	0	49	115	158	224	7.53e-15	72.4
MsG0280009986.01.T01	AT1G64000	45.349	86	40	3	22	107	91	169	1.49e-14	69.7
MsG0280009986.01.T01	AT2G37260	45.882	85	32	2	34	107	323	404	3.50e-14	71.2
MsG0280009986.01.T01	AT2G37260	45.882	85	32	2	34	107	243	324	3.63e-14	70.9
MsG0280009986.01.T01	AT2G37260	45.882	85	32	2	34	107	241	322	3.66e-14	70.9
MsG0280009986.01.T01	AT2G03340	35.833	120	66	4	6	123	376	486	4.65e-14	70.9
MsG0280009986.01.T01	AT5G41570	49.180	61	28	1	47	107	96	153	1.99e-13	66.6
MsG0280009986.01.T01	AT4G18170	51.667	60	26	1	48	107	171	227	2.20e-13	68.2
MsG0280009986.01.T01	AT1G29860	51.667	60	26	1	48	107	135	191	2.64e-13	67.8
MsG0280009986.01.T01	AT2G46130	45.455	66	33	1	42	107	23	85	4.15e-13	63.9
MsG0280009986.01.T01	AT1G69310	49.153	59	27	1	48	106	146	201	4.51e-13	67.0
MsG0280009986.01.T01	AT1G69310	49.153	59	27	1	48	106	146	201	4.51e-13	67.0
MsG0280009986.01.T01	AT1G69310	49.153	59	27	1	48	106	146	201	4.51e-13	67.0
MsG0280009986.01.T01	AT1G13960	43.902	82	37	3	26	107	392	464	6.51e-13	67.4
MsG0280009986.01.T01	AT2G44745	47.541	61	29	1	47	107	143	200	7.21e-13	65.5
MsG0280009986.01.T01	AT4G39410	46.667	60	29	1	47	106	221	277	7.42e-13	66.6
MsG0280009986.01.T01	AT5G46350	50.000	60	27	1	48	107	182	238	7.74e-13	66.6
MsG0280009986.01.T01	AT1G13960	38.095	105	53	4	6	107	216	311	9.90e-13	66.6
MsG0280009986.01.T01	AT2G47260	38.889	108	54	3	48	152	173	271	1.12e-12	66.2
MsG0280009986.01.T01	AT5G13080	49.180	61	28	1	47	107	65	122	1.70e-12	63.2
MsG0280009986.01.T01	AT4G31800	40.000	85	46	2	26	107	85	167	1.74e-12	65.1
MsG0280009986.01.T01	AT5G49520	49.153	59	27	1	48	106	220	275	2.91e-12	65.5
MsG0280009986.01.T01	AT4G31800	40.000	85	46	2	26	107	150	232	3.00e-12	65.1
MsG0280009986.01.T01	AT2G25000	43.077	65	35	1	43	107	97	159	2.82e-11	61.2
MsG0280009986.01.T01	AT2G25000	43.077	65	35	1	43	107	97	159	2.82e-11	61.2
MsG0280009986.01.T01	AT2G25000	43.077	65	35	1	43	107	119	181	3.41e-11	61.6
MsG0280009986.01.T01	AT3G01080	41.463	82	39	3	26	107	327	399	3.87e-11	62.4
MsG0280009986.01.T01	AT2G25000	43.077	65	35	1	43	107	140	202	4.80e-11	61.2
MsG0280009986.01.T01	AT5G26170	39.344	61	34	1	47	107	111	168	5.51e-11	59.7
MsG0280009986.01.T01	AT3G01080	41.463	82	39	3	26	107	289	361	7.31e-11	61.2
MsG0280009986.01.T01	AT5G45260	40.000	75	43	1	35	107	1192	1266	8.85e-11	61.6
MsG0280009986.01.T01	AT2G04880	47.541	61	29	1	47	107	281	338	9.04e-11	61.2

Find 57 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATTCAGATATCACATTAT+TGG	0.160744	2:-62449069	MsG0280009986.01.T01:CDS
ATCCCCATCCCCGACGGGTT+CGG	0.296207	2:+62450766	None:intergenic
ACCCGTCGGGGATGGGGATG+GGG	0.314684	2:-62450762	MsG0280009986.01.T01:CDS
TCCCCATCCCCGACGGGTTC+GGG	0.316739	2:+62450767	None:intergenic
GGCTATGAATGGAGAAAGTA+TGG	0.339396	2:-62449639	MsG0280009986.01.T01:CDS
ATGCAGGGACGGGGATGGGG+TGG	0.339489	2:-62450795	None:intergenic
ATTATGATGGCCATAGTATA+TGG	0.342137	2:+62449109	None:intergenic
AACAAATATTGTTGATCCTA+TGG	0.354027	2:-62448781	MsG0280009986.01.T01:CDS
GCAGGGACGGGGATGGGGTG+GGG	0.355401	2:-62450793	None:intergenic
TTCAATTTCATGATGGTTGT+GGG	0.364141	2:-62448815	MsG0280009986.01.T01:CDS
AACCCGTCGGGGATGGGGAT+GGG	0.365653	2:-62450763	MsG0280009986.01.T01:CDS
CTTCAATTTCATGATGGTTG+TGG	0.366368	2:-62448816	MsG0280009986.01.T01:CDS
TGGGGATACCCGAACCCGTC+GGG	0.369216	2:-62450775	MsG0280009986.01.T01:CDS
TAGTATATGGTTCTGTATAA+TGG	0.370420	2:+62449122	None:intergenic
AACATAGAAGAAGTACTATT+AGG	0.393005	2:+62449044	None:intergenic
GTGACCAATGTGGTGATCAT+AGG	0.394837	2:+62448935	None:intergenic
ATGGGAATTGTTCTTTGCAT+TGG	0.395390	2:+62449000	None:intergenic
TGGGAATTGTTCTTTGCATT+GGG	0.399106	2:+62449001	None:intergenic
ACCCGAACCCGTCGGGGATG+GGG	0.399235	2:-62450768	MsG0280009986.01.T01:CDS
AAGATGAATTTGATTATTTG+AGG	0.408137	2:-62448869	MsG0280009986.01.T01:CDS
GATGGTTGTGGGCGCAATCT+TGG	0.419474	2:-62448804	MsG0280009986.01.T01:CDS
TTATACAGAACCATATACTA+TGG	0.423747	2:-62449119	MsG0280009986.01.T01:CDS
GAACCCGTCGGGGATGGGGA+TGG	0.426530	2:-62450764	MsG0280009986.01.T01:CDS
TAGGGATTAATCACTTCTAT+AGG	0.427943	2:+62448954	None:intergenic
TACCCGAACCCGTCGGGGAT+GGG	0.432510	2:-62450769	MsG0280009986.01.T01:CDS
TTGGGTATGGGTAGGGTAAC+GGG	0.433745	2:-62450721	MsG0280009986.01.T01:intron
TTCAATTTCTCATACCCGTT+GGG	0.434768	2:-62450739	MsG0280009986.01.T01:CDS
GATATCTGAATTTAATAAAG+AGG	0.448286	2:+62449079	None:intergenic
TTTCTCATACCCGTTGGGTA+TGG	0.451287	2:-62450734	MsG0280009986.01.T01:CDS
CAATCTCTTCAATTTCATGA+TGG	0.464117	2:-62448822	MsG0280009986.01.T01:CDS
TGCAGGGACGGGGATGGGGT+GGG	0.480181	2:-62450794	None:intergenic
TTCTCATACCCGTTGGGTAT+GGG	0.484460	2:-62450733	MsG0280009986.01.T01:CDS
ATACCCGAACCCGTCGGGGA+TGG	0.505346	2:-62450770	MsG0280009986.01.T01:CDS
GTTCAATTTCTCATACCCGT+TGG	0.509383	2:-62450740	MsG0280009986.01.T01:CDS
GTTGGGTATGGGTAGGGTAA+CGG	0.518896	2:-62450722	MsG0280009986.01.T01:CDS
TGATTGAAGATGGCTATGAA+TGG	0.519157	2:-62449650	MsG0280009986.01.T01:CDS
TTACCCTACCCATACCCAAC+GGG	0.521649	2:+62450725	None:intergenic
GGGAGCTGTCATTGAAGCTA+AGG	0.532528	2:+62449021	None:intergenic
GTGGGGATACCCGAACCCGT+CGG	0.539677	2:-62450776	MsG0280009986.01.T01:CDS
CATACCCGTTGGGTATGGGT+AGG	0.552236	2:-62450729	MsG0280009986.01.T01:CDS
GGTAATCTGATGTTACTGAT+TGG	0.556946	2:+62448910	None:intergenic
ACCCCATCCCCATCCCCGAC+GGG	0.557768	2:+62450761	None:intergenic
AACCCCATCCCCATCCCCGA+CGG	0.563885	2:+62450760	None:intergenic
TGACCAATGTGGTGATCATA+GGG	0.567460	2:+62448936	None:intergenic
TAATCAATGCAAAATACCTA+AGG	0.578124	2:-62449605	MsG0280009986.01.T01:intron
ATACCCGTTGGGTATGGGTA+GGG	0.590328	2:-62450728	MsG0280009986.01.T01:CDS
TATATGGTTCTGTATAATGG+AGG	0.591303	2:+62449125	None:intergenic
CTTACCTAATTAAAATCCAT+AGG	0.595764	2:+62448765	None:intergenic
GGGGATACCCGAACCCGTCG+GGG	0.598531	2:-62450774	MsG0280009986.01.T01:CDS
ATATGGTTCTGTATAATGGA+GGG	0.609613	2:+62449126	None:intergenic
ATGAAATTGAAGAGATTGTG+TGG	0.612061	2:+62448827	None:intergenic
CTTCATAATCACATGAGAGA+GGG	0.620688	2:+62448889	None:intergenic
ACATGTGCAGAGAATTCAAG+AGG	0.632753	2:-62449150	MsG0280009986.01.T01:CDS
TCTTCATAATCACATGAGAG+AGG	0.633424	2:+62448888	None:intergenic
AATCCCTATGATCACCACAT+TGG	0.633844	2:-62448939	MsG0280009986.01.T01:CDS
GTTACCCTACCCATACCCAA+CGG	0.659888	2:+62450724	None:intergenic
CTGATTGGTTGTGACCAATG+TGG	0.754057	2:+62448925	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATAGATTAGTTAAAAAATA+TGG	+	Chr2:62450064-62450083	None:intergenic	10.0%
!!!	TTATTTTAAAACTATAGTAA+TGG	+	Chr2:62449685-62449704	None:intergenic	10.0%
!!!	TTTTGCTAATATTAAATTTA+GGG	+	Chr2:62449167-62449186	None:intergenic	10.0%
!!!	TTTTTGCTAATATTAAATTT+AGG	+	Chr2:62449168-62449187	None:intergenic	10.0%
!!	ATTACATCATAGTTATAAAA+AGG	+	Chr2:62449744-62449763	None:intergenic	15.0%
!!	CAAAGAAATATGATATTTAT+TGG	-	Chr2:62449818-62449837	MsG0280009986.01.T01:intron	15.0%
!!	AAATTCAGATATCACATTAT+TGG	-	Chr2:62450482-62450501	MsG0280009986.01.T01:intron	20.0%
!!	AAGATGAATTTGATTATTTG+AGG	-	Chr2:62450682-62450701	MsG0280009986.01.T01:intron	20.0%
!!	ATCATAGTTATAAAAAGGTA+AGG	+	Chr2:62449739-62449758	None:intergenic	20.0%
!!	ATGTGAAAAAGAAAAAAAGT+TGG	-	Chr2:62449625-62449644	MsG0280009986.01.T01:CDS	20.0%
!!	ATTGAAGATATATATACCTT+AGG	+	Chr2:62449965-62449984	None:intergenic	20.0%
!!	CAATATATCATTCATATCAT+AGG	-	Chr2:62450328-62450347	MsG0280009986.01.T01:intron	20.0%
!!	GATATCTGAATTTAATAAAG+AGG	+	Chr2:62450475-62450494	None:intergenic	20.0%
!!	TGTGAAAAAGAAAAAAAGTT+GGG	-	Chr2:62449626-62449645	MsG0280009986.01.T01:CDS	20.0%
!!!	AATGAACATGTATTTTGAAA+CGG	+	Chr2:62450005-62450024	None:intergenic	20.0%
!!!	AATTGGACATTTATTTTAGT+CGG	+	Chr2:62449402-62449421	None:intergenic	20.0%
!!!	CAATTTTCGGATAAAATAAT+GGG	-	Chr2:62449370-62449389	MsG0280009986.01.T01:intron	20.0%
!!!	CTTCCATTTATTTTAGAAAA+TGG	+	Chr2:62449659-62449678	None:intergenic	20.0%
!!!	TCTCCATTTTCTAAAATAAA+TGG	-	Chr2:62449653-62449672	MsG0280009986.01.T01:CDS	20.0%
!	AAATGTCCAATTCAAAAACA+TGG	-	Chr2:62449410-62449429	MsG0280009986.01.T01:intron	25.0%
!	AACAAATATTGTTGATCCTA+TGG	-	Chr2:62450770-62450789	MsG0280009986.01.T01:CDS	25.0%
!	AATGAAATCAAAAACTCCAA+AGG	-	Chr2:62449010-62449029	MsG0280009986.01.T01:CDS	25.0%
!	ACAATAGACTTTAATTAACG+GGG	-	Chr2:62449602-62449621	MsG0280009986.01.T01:intron	25.0%
!	AGCATTTCCCTTTATTATTT+AGG	-	Chr2:62449235-62449254	MsG0280009986.01.T01:intron	25.0%
!	ATACGATATAAATGCACAAT+AGG	-	Chr2:62449707-62449726	MsG0280009986.01.T01:CDS	25.0%
!	CACAAAGCAATAAATATGAA+AGG	+	Chr2:62448985-62449004	None:intergenic	25.0%
!	CACAATAGACTTTAATTAAC+GGG	-	Chr2:62449601-62449620	MsG0280009986.01.T01:intron	25.0%
!	CCACAATAGACTTTAATTAA+CGG	-	Chr2:62449600-62449619	MsG0280009986.01.T01:intron	25.0%
!	GTTACGACCTAAATAATAAA+GGG	+	Chr2:62449245-62449264	None:intergenic	25.0%
!	TAATCAATGCAAAATACCTA+AGG	-	Chr2:62449946-62449965	MsG0280009986.01.T01:intron	25.0%
!	TAATGGTAAATAGACAGATA+TGG	-	Chr2:62449040-62449059	MsG0280009986.01.T01:CDS	25.0%
!	TGCTAATATTAAATTTAGGG+TGG	+	Chr2:62449164-62449183	None:intergenic	25.0%
!	TTATACAGAACCATATACTA+TGG	-	Chr2:62450432-62450451	MsG0280009986.01.T01:intron	25.0%
!!	CTAATATTAAATTTAGGGTG+GGG	+	Chr2:62449162-62449181	None:intergenic	25.0%
!!	GCAATTTTCGGATAAAATAA+TGG	-	Chr2:62449369-62449388	MsG0280009986.01.T01:intron	25.0%
!!	GCTAATATTAAATTTAGGGT+GGG	+	Chr2:62449163-62449182	None:intergenic	25.0%
!!	TAGTATATGGTTCTGTATAA+TGG	+	Chr2:62450432-62450451	None:intergenic	25.0%
!!!	AACATAGAAGAAGTACTATT+AGG	+	Chr2:62450510-62450529	None:intergenic	25.0%
	AAAACCTAAATACTCCTATC+AGG	+	Chr2:62449314-62449333	None:intergenic	30.0%
	AACTATATGAAAATCGGGTA+TGG	-	Chr2:62448854-62448873	MsG0280009986.01.T01:CDS	30.0%
	AATATGAGAAGTTTCATTGG+AGG	-	Chr2:62449063-62449082	MsG0280009986.01.T01:CDS	30.0%
	AATTCAAAAACATGGTCCTT+CGG	-	Chr2:62449418-62449437	MsG0280009986.01.T01:intron	30.0%
	ACGGGTAACTATATGAAAAT+CGG	-	Chr2:62448848-62448867	MsG0280009986.01.T01:CDS	30.0%
	ACTATATGAAAATCGGGTAT+GGG	-	Chr2:62448855-62448874	MsG0280009986.01.T01:CDS	30.0%
	AGACGTACACATAAAACTTT+CGG	+	Chr2:62449445-62449464	None:intergenic	30.0%
	AGTGGTTAAGTCTTACAATT+AGG	+	Chr2:62448925-62448944	None:intergenic	30.0%
	ATATGAGAAGTTTCATTGGA+GGG	-	Chr2:62449064-62449083	MsG0280009986.01.T01:CDS	30.0%
	ATGAAATTGAAGAGATTGTG+TGG	+	Chr2:62450727-62450746	None:intergenic	30.0%
	ATTATGATGGCCATAGTATA+TGG	+	Chr2:62450445-62450464	None:intergenic	30.0%
	CAATCTCTTCAATTTCATGA+TGG	-	Chr2:62450729-62450748	MsG0280009986.01.T01:CDS	30.0%
	CCGTTAATTAAAGTCTATTG+TGG	+	Chr2:62449603-62449622	None:intergenic	30.0%
	GGTTACGACCTAAATAATAA+AGG	+	Chr2:62449246-62449265	None:intergenic	30.0%
	TAACCCTTGAACTTAACAAT+CGG	-	Chr2:62449261-62449280	MsG0280009986.01.T01:intron	30.0%
	TAGGGATTAATCACTTCTAT+AGG	+	Chr2:62450600-62450619	None:intergenic	30.0%
	TGGAATATGAGAAGTTTCAT+TGG	-	Chr2:62449060-62449079	MsG0280009986.01.T01:CDS	30.0%
	TTAAGTCTTACAATTAGGCA+TGG	+	Chr2:62448920-62448939	None:intergenic	30.0%
	TTAGATTAGTAACTCCTGAT+AGG	-	Chr2:62449297-62449316	MsG0280009986.01.T01:intron	30.0%
	TTATCCGAAAATTGCTCAAT+AGG	+	Chr2:62449364-62449383	None:intergenic	30.0%
	TTCAATTTCATGATGGTTGT+GGG	-	Chr2:62450736-62450755	MsG0280009986.01.T01:CDS	30.0%
	TTGAAAGACAACACTTTCAA+TGG	-	Chr2:62448950-62448969	MsG0280009986.01.T01:CDS	30.0%
!	AAGAGGTTTTGCAATTATGA+TGG	+	Chr2:62450458-62450477	None:intergenic	30.0%
!	ATATGGTTCTGTATAATGGA+GGG	+	Chr2:62450428-62450447	None:intergenic	30.0%
!	ATTTTCATCATCCACAAAAC+TGG	-	Chr2:62450572-62450591	MsG0280009986.01.T01:intron	30.0%
!	GTTTTGTGGATGATGAAAAT+GGG	+	Chr2:62450572-62450591	None:intergenic	30.0%
!	TATATGGTTCTGTATAATGG+AGG	+	Chr2:62450429-62450448	None:intergenic	30.0%
!!	AAAGTTTTATGTGTACGTCT+TGG	-	Chr2:62449445-62449464	MsG0280009986.01.T01:intron	30.0%
!!	AGTTTTGTGGATGATGAAAA+TGG	+	Chr2:62450573-62450592	None:intergenic	30.0%
!!	CTTGGACATGTATTTTGAAA+CGG	-	Chr2:62450225-62450244	MsG0280009986.01.T01:intron	30.0%
!!!	AACATGTATTTTGAAACGGA+GGG	+	Chr2:62450001-62450020	None:intergenic	30.0%
!!!	AGCTCAATTTTGATTGAAGA+TGG	-	Chr2:62449891-62449910	MsG0280009986.01.T01:intron	30.0%
!!!	AGGAGTATTTAGGTTTTTGA+CGG	-	Chr2:62449317-62449336	MsG0280009986.01.T01:intron	30.0%
	AAGATCAAAAACACGCACTT+GGG	-	Chr2:62449860-62449879	MsG0280009986.01.T01:intron	35.0%
	ACTTCCGATTGTTAAGTTCA+AGG	+	Chr2:62449268-62449287	None:intergenic	35.0%
	ATGGGAATTGTTCTTTGCAT+TGG	+	Chr2:62450554-62450573	None:intergenic	35.0%
	CGGGTAACTATATGAAAATC+GGG	-	Chr2:62448849-62448868	MsG0280009986.01.T01:CDS	35.0%
	CTATATGAAAATCGGGTATG+GGG	-	Chr2:62448856-62448875	MsG0280009986.01.T01:CDS	35.0%
	CTTCAATTTCATGATGGTTG+TGG	-	Chr2:62450735-62450754	MsG0280009986.01.T01:CDS	35.0%
	CTTCATAATCACATGAGAGA+GGG	+	Chr2:62450665-62450684	None:intergenic	35.0%
	CTTCCGATTGTTAAGTTCAA+GGG	+	Chr2:62449267-62449286	None:intergenic	35.0%
	GACGTACACATAAAACTTTC+GGG	+	Chr2:62449444-62449463	None:intergenic	35.0%
	GGTAATCTGATGTTACTGAT+TGG	+	Chr2:62450644-62450663	None:intergenic	35.0%
	TAAGATCAAAAACACGCACT+TGG	-	Chr2:62449859-62449878	MsG0280009986.01.T01:intron	35.0%
	TCTTCATAATCACATGAGAG+AGG	+	Chr2:62450666-62450685	None:intergenic	35.0%
	TGATTGAAGATGGCTATGAA+TGG	-	Chr2:62449901-62449920	MsG0280009986.01.T01:intron	35.0%
	TGGGAATTGTTCTTTGCATT+GGG	+	Chr2:62450553-62450572	None:intergenic	35.0%
	TTACAATTAGGCATGGCAAT+GGG	+	Chr2:62448913-62448932	None:intergenic	35.0%
	TTACCATTAGACTGAACCTT+TGG	+	Chr2:62449029-62449048	None:intergenic	35.0%
	TTCAATTTCTCATACCCGTT+GGG	-	Chr2:62448812-62448831	MsG0280009986.01.T01:CDS	35.0%
!	TCTAAGGTAGGAAAGAATCT+GGG	+	Chr2:62449127-62449146	None:intergenic	35.0%
!!	AACTCCTGATAGGAGTATTT+AGG	-	Chr2:62449307-62449326	MsG0280009986.01.T01:intron	35.0%
!!	GAAGGACCATGTTTTTGAAT+TGG	+	Chr2:62449419-62449438	None:intergenic	35.0%
!!	GGAGTATTTAGGTTTTTGAC+GGG	-	Chr2:62449318-62449337	MsG0280009986.01.T01:intron	35.0%
!!	GGCTCAAAAAGTACTTACAA+AGG	+	Chr2:62449105-62449124	None:intergenic	35.0%
!!!	GAACATGTATTTTGAAACGG+AGG	+	Chr2:62450002-62450021	None:intergenic	35.0%
	AATCCCTATGATCACCACAT+TGG	-	Chr2:62450612-62450631	MsG0280009986.01.T01:intron	40.0%
	ACATGTGCAGAGAATTCAAG+AGG	-	Chr2:62450401-62450420	MsG0280009986.01.T01:intron	40.0%
	ACTCCAAAGGTTCAGTCTAA+TGG	-	Chr2:62449023-62449042	MsG0280009986.01.T01:CDS	40.0%
	CTAAGGTAGGAAAGAATCTG+GGG	+	Chr2:62449126-62449145	None:intergenic	40.0%
	CTTACAATTAGGCATGGCAA+TGG	+	Chr2:62448914-62448933	None:intergenic	40.0%
	GGCTATGAATGGAGAAAGTA+TGG	-	Chr2:62449912-62449931	MsG0280009986.01.T01:intron	40.0%
	GTTCAATTTCTCATACCCGT+TGG	-	Chr2:62448811-62448830	MsG0280009986.01.T01:CDS	40.0%
	TACAATTAGGCATGGCAATG+GGG	+	Chr2:62448912-62448931	None:intergenic	40.0%
	TGACCAATGTGGTGATCATA+GGG	+	Chr2:62450618-62450637	None:intergenic	40.0%
	TTATGTGTACGTCTTGGCAT+AGG	-	Chr2:62449451-62449470	MsG0280009986.01.T01:intron	40.0%
!	ACGGGCTGTTAACAATTGAA+GGG	-	Chr2:62449336-62449355	MsG0280009986.01.T01:intron	40.0%
!	ATGATGACTCAGTCTAAGGT+AGG	+	Chr2:62449139-62449158	None:intergenic	40.0%
!	GTCTAAGGTAGGAAAGAATC+TGG	+	Chr2:62449128-62449147	None:intergenic	40.0%
!	TGTTGTCTTTCAAGTGTGAG+TGG	+	Chr2:62448943-62448962	None:intergenic	40.0%
!	TTCTATAGGCTCCAGTTTTG+TGG	+	Chr2:62450586-62450605	None:intergenic	40.0%
	AAAAACACGCACTTGGGAGA+AGG	-	Chr2:62449866-62449885	MsG0280009986.01.T01:intron	45.0%
	ACATAAAACTTTCGGGCCGA+AGG	+	Chr2:62449437-62449456	None:intergenic	45.0%
	ATGAAAATCGGGTATGGGGA+CGG	-	Chr2:62448860-62448879	MsG0280009986.01.T01:CDS	45.0%
	CATGTGTGAAGTGGTTGACT+TGG	-	Chr2:62450207-62450226	MsG0280009986.01.T01:intron	45.0%
	CGGGCTGTTAACAATTGAAG+GGG	-	Chr2:62449337-62449356	MsG0280009986.01.T01:intron	45.0%
	GGGCTGTTAACAATTGAAGG+GGG	-	Chr2:62449338-62449357	MsG0280009986.01.T01:intron	45.0%
	GTGACCAATGTGGTGATCAT+AGG	+	Chr2:62450619-62450638	None:intergenic	45.0%
	GTGCATTAGCATGTGTGAAG+TGG	-	Chr2:62450198-62450217	MsG0280009986.01.T01:intron	45.0%
	TGAGAAGTTTCATTGGAGGG+AGG	-	Chr2:62449067-62449086	MsG0280009986.01.T01:CDS	45.0%
	TTCTCATACCCGTTGGGTAT+GGG	-	Chr2:62448818-62448837	MsG0280009986.01.T01:CDS	45.0%
	TTTCTCATACCCGTTGGGTA+TGG	-	Chr2:62448817-62448836	MsG0280009986.01.T01:CDS	45.0%
!	CTGATTGGTTGTGACCAATG+TGG	+	Chr2:62450629-62450648	None:intergenic	45.0%
!	GGGGCCTATTGAGCAATTTT+CGG	-	Chr2:62449357-62449376	MsG0280009986.01.T01:intron	45.0%
!!	GACGGGCTGTTAACAATTGA+AGG	-	Chr2:62449335-62449354	MsG0280009986.01.T01:intron	45.0%
	AATTAGGCATGGCAATGGGG+CGG	+	Chr2:62448909-62448928	None:intergenic	50.0%
	ATACCCGTTGGGTATGGGTA+GGG	-	Chr2:62448823-62448842	MsG0280009986.01.T01:CDS	50.0%
	CGTCTTGGCATAGGATGTGT+CGG	-	Chr2:62449460-62449479	MsG0280009986.01.T01:intron	50.0%
	GGGAGCTGTCATTGAAGCTA+AGG	+	Chr2:62450533-62450552	None:intergenic	50.0%
	GGGGATGATGACTCAGTCTA+AGG	+	Chr2:62449143-62449162	None:intergenic	50.0%
	GTTACCCTACCCATACCCAA+CGG	+	Chr2:62448830-62448849	None:intergenic	50.0%
	GTTGGGTATGGGTAGGGTAA+CGG	-	Chr2:62448829-62448848	MsG0280009986.01.T01:CDS	50.0%
	GTTTCATTGGAGGGAGGTGA+AGG	-	Chr2:62449073-62449092	MsG0280009986.01.T01:CDS	50.0%
	TGAAAATCGGGTATGGGGAC+GGG	-	Chr2:62448861-62448880	MsG0280009986.01.T01:CDS	50.0%
	TTACCCTACCCATACCCAAC+GGG	+	Chr2:62448829-62448848	None:intergenic	50.0%
	TTGGGTATGGGTAGGGTAAC+GGG	-	Chr2:62448830-62448849	MsG0280009986.01.T01:CDS	50.0%
	ATTAGGCATGGCAATGGGGC+GGG	+	Chr2:62448908-62448927	None:intergenic	55.0%
	CATACCCGTTGGGTATGGGT+AGG	-	Chr2:62448822-62448841	MsG0280009986.01.T01:CDS	55.0%
	GAAAATCGGGTATGGGGACG+GGG	-	Chr2:62448862-62448881	MsG0280009986.01.T01:CDS	55.0%
	GATGGTTGTGGGCGCAATCT+TGG	-	Chr2:62450747-62450766	MsG0280009986.01.T01:CDS	55.0%
	AACCCCATCCCCATCCCCGA+CGG	+	Chr2:62448794-62448813	None:intergenic	65.0%
	AACCCGTCGGGGATGGGGAT+GGG	-	Chr2:62448788-62448807	MsG0280009986.01.T01:CDS	65.0%
	ATACCCGAACCCGTCGGGGA+TGG	-	Chr2:62448781-62448800	MsG0280009986.01.T01:CDS	65.0%
	CATGGCAATGGGGCGGGATG+GGG	+	Chr2:62448902-62448921	None:intergenic	65.0%
	GCATGGCAATGGGGCGGGAT+GGG	+	Chr2:62448903-62448922	None:intergenic	65.0%
	GTGGGGATACCCGAACCCGT+CGG	-	Chr2:62448775-62448794	MsG0280009986.01.T01:CDS	65.0%
	TACCCGAACCCGTCGGGGAT+GGG	-	Chr2:62448782-62448801	MsG0280009986.01.T01:CDS	65.0%
	TGGGGATACCCGAACCCGTC+GGG	-	Chr2:62448776-62448795	MsG0280009986.01.T01:CDS	65.0%
!	ATCCCCATCCCCGACGGGTT+CGG	+	Chr2:62448788-62448807	None:intergenic	65.0%
	ACCCCATCCCCATCCCCGAC+GGG	+	Chr2:62448793-62448812	None:intergenic	70.0%
	ACCCGAACCCGTCGGGGATG+GGG	-	Chr2:62448783-62448802	MsG0280009986.01.T01:CDS	70.0%
	ACCCGTCGGGGATGGGGATG+GGG	-	Chr2:62448789-62448808	MsG0280009986.01.T01:CDS	70.0%
	CAATGGGGCGGGATGGGGAC+GGG	+	Chr2:62448897-62448916	None:intergenic	70.0%
	GAACCCGTCGGGGATGGGGA+TGG	-	Chr2:62448787-62448806	MsG0280009986.01.T01:CDS	70.0%
	GCAATGGGGCGGGATGGGGA+CGG	+	Chr2:62448898-62448917	None:intergenic	70.0%
	GGCATGGCAATGGGGCGGGA+TGG	+	Chr2:62448904-62448923	None:intergenic	70.0%
	GGGGATACCCGAACCCGTCG+GGG	-	Chr2:62448777-62448796	MsG0280009986.01.T01:CDS	70.0%
!	TCCCCATCCCCGACGGGTTC+GGG	+	Chr2:62448787-62448806	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	62448770	62450803	62448770	ID=MsG0280009986.01;Name=MsG0280009986.01
Chr2	mRNA	62448770	62450803	62448770	ID=MsG0280009986.01.T01;Parent=MsG0280009986.01;Name=MsG0280009986.01.T01;_AED=0.56;_eAED=0.56;_QI=0\|0\|0\|0.66\|0.5\|0.33\|3\|0\|219
Chr2	exon	62450722	62450803	62450722	ID=MsG0280009986.01.T01:exon:14106;Parent=MsG0280009986.01.T01
Chr2	exon	62449606	62449729	62449606	ID=MsG0280009986.01.T01:exon:14105;Parent=MsG0280009986.01.T01
Chr2	exon	62448770	62449223	62448770	ID=MsG0280009986.01.T01:exon:14104;Parent=MsG0280009986.01.T01
Chr2	CDS	62450722	62450803	62450722	ID=MsG0280009986.01.T01:cds;Parent=MsG0280009986.01.T01
Chr2	CDS	62449606	62449729	62449606	ID=MsG0280009986.01.T01:cds;Parent=MsG0280009986.01.T01
Chr2	CDS	62448770	62449223	62448770	ID=MsG0280009986.01.T01:cds;Parent=MsG0280009986.01.T01

Gene Sequence

>MsG0280009986.01.T01

ATGGGGTGGGGATACCCGAACCCGTCGGGGATGGGGATGGGGTTCAATTTCTCATACCCGTTGGGTATGGGTAGGGTAACGGACTATTTCATTTTGATAAGATCAAAAACACGCACTTGGGAGAAGGATAGCTCAATTTTGATTGAAGATGGCTATGAATGGAGAAAGTATGGACAAAAGAAGATAATCAATGCAAAATACCTAAGGAGCTACTATAGATGCACTTACAAAAGTGATGAAGAATGTGAAGCTATGAAACATGTGCAGAGAATTCAAGAGGACCCTCCATTATACAGAACCATATACTATGGCCATCATAATTGCAAAACCTCTTTATTAAATTCAGATATCACATTATTGGAACCTAATAGTACTTCTTCTATGTTCCTTAGCTTCAATGACAGCTCCCAATGCAAAGAACAATTCCCATTTTCATCATCCACAAAACTGGAGCCTATAGAAGTGATTAATCCCTATGATCACCACATTGGTCACAACCAATCAGTAACATCAGATTACCCTCTCTCATGTGATTATGAAGATGAATTTGATTATTTGAGGCATGCTACTATGTTATCATCCACACAATCTCTTCAATTTCATGATGGTTGTGGGCGCAATCTTGGAACAAATATTGTTGATCCTATGGATTTTAATTAG

Protein sequence

>MsG0280009986.01.T01

MGWGYPNPSGMGMGFNFSYPLGMGRVTDYFILIRSKTRTWEKDSSILIEDGYEWRKYGQKKIINAKYLRSYYRCTYKSDEECEAMKHVQRIQEDPPLYRTIYYGHHNCKTSLLNSDITLLEPNSTSSMFLSFNDSSQCKEQFPFSSSTKLEPIEVINPYDHHIGHNQSVTSDYPLSCDYEDEFDYLRHATMLSSTQSLQFHDGCGRNLGTNIVDPMDFN*