Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005705.01.T01 | ABD32582.1 | 65.496 | 826 | 196 | 7 | 1 | 738 | 53 | 877 | 0 | 995 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005705.01.T01 | Q2HU05 | 65.496 | 826 | 196 | 7 | 1 | 738 | 53 | 877 | 0.0 | 995 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047797.01 | MsG0180005705.01 | 0.804022 | 2.637503e-49 | 1.345466e-46 |
| MsG0080047869.01 | MsG0180005705.01 | 0.812881 | 3.391004e-51 | 2.181349e-48 |
| MsG0080048874.01 | MsG0180005705.01 | 0.836725 | 7.906312e-57 | 1.005022e-53 |
| MsG0180000470.01 | MsG0180005705.01 | 0.828168 | 1.044669e-54 | 1.030237e-51 |
| MsG0180000650.01 | MsG0180005705.01 | 0.809135 | 2.197206e-50 | 1.279714e-47 |
| MsG0180002195.01 | MsG0180005705.01 | 0.839208 | 1.818321e-57 | 2.493409e-54 |
| MsG0180002282.01 | MsG0180005705.01 | 0.800626 | 1.319629e-48 | 6.173898e-46 |
| MsG0180002842.01 | MsG0180005705.01 | 0.810539 | 1.096401e-50 | 6.626515e-48 |
| MsG0180002952.01 | MsG0180005705.01 | 0.817589 | 3.048810e-52 | 2.229477e-49 |
| MsG0180004085.01 | MsG0180005705.01 | 0.801696 | 7.972536e-49 | 3.832089e-46 |
| MsG0180004264.01 | MsG0180005705.01 | 0.832532 | 8.958675e-56 | 1.004131e-52 |
| MsG0180004789.01 | MsG0180005705.01 | 0.803049 | 4.196291e-49 | 2.087727e-46 |
| MsG0180005705.01 | MsG0180006134.01 | 0.813679 | 2.265279e-51 | 1.489039e-48 |
| MsG0180005705.01 | MsG0280006325.01 | 0.816454 | 5.484932e-52 | 3.888006e-49 |
| MsG0180005705.01 | MsG0280008894.01 | 0.817561 | 3.093553e-52 | 2.260477e-49 |
| MsG0180005705.01 | MsG0280009248.01 | 0.827112 | 1.872429e-54 | 1.790482e-51 |
| MsG0180005705.01 | MsG0280009297.01 | 0.800194 | 1.615467e-48 | 7.475527e-46 |
| MsG0180005705.01 | MsG0280009986.01 | 0.825162 | 5.448006e-54 | 4.927202e-51 |
| MsG0180005705.01 | MsG0280010336.01 | 0.820241 | 7.609020e-53 | 5.987810e-50 |
| MsG0180005705.01 | MsG0280010443.01 | 0.833153 | 6.279233e-56 | 7.170240e-53 |
| MsG0180005705.01 | MsG0380011786.01 | 0.838607 | 2.600717e-57 | 3.501600e-54 |
| MsG0180005705.01 | MsG0380011910.01 | 0.803099 | 4.098118e-49 | 2.041422e-46 |
| MsG0180005705.01 | MsG0380012330.01 | 0.820134 | 8.054281e-53 | 6.320110e-50 |
| MsG0180005705.01 | MsG0380012365.01 | 0.809810 | 1.574292e-50 | 9.334954e-48 |
| MsG0180005705.01 | MsG0380014135.01 | 0.809821 | 1.565742e-50 | 9.286758e-48 |
| MsG0180005705.01 | MsG0380014239.01 | 0.804511 | 2.085313e-49 | 1.077183e-46 |
| MsG0180005705.01 | MsG0380014251.01 | 0.830674 | 2.570562e-55 | 2.727240e-52 |
| MsG0180005705.01 | MsG0380014894.01 | 0.811175 | 7.985187e-51 | 4.908632e-48 |
| MsG0180005705.01 | MsG0380014902.01 | 0.815547 | 8.741908e-52 | 6.045165e-49 |
| MsG0180005705.01 | MsG0380015039.01 | 0.800204 | 1.608049e-48 | 7.443106e-46 |
| MsG0180005705.01 | MsG0380016475.01 | 0.807145 | 5.831405e-50 | 3.223287e-47 |
| MsG0180005705.01 | MsG0380017822.01 | 0.801567 | 8.471506e-49 | 4.058824e-46 |
| MsG0180005705.01 | MsG0480018964.01 | 0.805036 | 1.620243e-49 | 8.483834e-47 |
| MsG0180005705.01 | MsG0480020634.01 | 0.801982 | 6.962801e-49 | 3.371179e-46 |
| MsG0180005705.01 | MsG0480021276.01 | 0.809240 | 2.086288e-50 | 1.218543e-47 |
| MsG0180005705.01 | MsG0480022259.01 | 0.815054 | 1.125195e-51 | 7.676345e-49 |
| MsG0180005705.01 | MsG0480022262.01 | 0.816461 | 5.464700e-52 | 3.874432e-49 |
| MsG0180005705.01 | MsG0480023248.01 | 0.811788 | 5.874890e-51 | 3.670339e-48 |
| MsG0180005705.01 | MsG0480023251.01 | 0.805545 | 1.267359e-49 | 6.723397e-47 |
| MsG0180005705.01 | MsG0480023654.01 | 0.815861 | 7.442269e-52 | 5.190669e-49 |
| MsG0180005705.01 | MsG0580024114.01 | 0.801751 | 7.767155e-49 | 3.738628e-46 |
| MsG0180005705.01 | MsG0580024305.01 | 0.801580 | 8.420358e-49 | 4.035590e-46 |
| MsG0180005705.01 | MsG0580024363.01 | -0.804138 | 2.493894e-49 | 1.276008e-46 |
| MsG0180005705.01 | MsG0580024621.01 | 0.809026 | 2.319424e-50 | 1.346841e-47 |
| MsG0180005705.01 | MsG0580025201.01 | 0.804036 | 2.618989e-49 | 1.336530e-46 |
| MsG0180005705.01 | MsG0580025435.01 | 0.811101 | 8.284750e-51 | 5.082961e-48 |
| MsG0180005705.01 | MsG0580026165.01 | 0.808331 | 3.264902e-50 | 1.861637e-47 |
| MsG0180005705.01 | MsG0580027018.01 | 0.822806 | 1.944889e-53 | 1.645003e-50 |
| MsG0180005705.01 | MsG0580027688.01 | 0.800706 | 1.270561e-48 | 5.956247e-46 |
| MsG0180005705.01 | MsG0580027829.01 | 0.814370 | 1.595038e-51 | 1.068287e-48 |
| MsG0180005705.01 | MsG0580027832.01 | 0.813922 | 2.002692e-51 | 1.325079e-48 |
| MsG0180005705.01 | MsG0580027833.01 | 0.824404 | 8.220869e-54 | 7.274074e-51 |
| MsG0180005705.01 | MsG0580027838.01 | 0.828906 | 6.926808e-55 | 6.978809e-52 |
| MsG0180005705.01 | MsG0580028170.01 | 0.800927 | 1.145624e-48 | 5.401082e-46 |
| MsG0180005705.01 | MsG0580029554.01 | 0.811585 | 6.503240e-51 | 4.041138e-48 |
| MsG0180005705.01 | MsG0680030561.01 | 0.809896 | 1.508366e-50 | 8.963830e-48 |
| MsG0180005705.01 | MsG0680031379.01 | 0.809831 | 1.558082e-50 | 9.243740e-48 |
| MsG0180005705.01 | MsG0680032157.01 | 0.806027 | 1.003881e-49 | 5.392121e-47 |
| MsG0180005705.01 | MsG0680032801.01 | 0.816148 | 6.420383e-52 | 4.513495e-49 |
| MsG0180005705.01 | MsG0680035444.01 | 0.810706 | 1.008938e-50 | 6.125460e-48 |
| MsG0180005705.01 | MsG0780036018.01 | 0.806516 | 7.919192e-50 | 4.306931e-47 |
| MsG0180005705.01 | MsG0780036080.01 | 0.818425 | 1.973287e-52 | 1.476662e-49 |
| MsG0180005705.01 | MsG0780036134.01 | 0.805776 | 1.133647e-49 | 6.050188e-47 |
| MsG0180005705.01 | MsG0780036201.01 | 0.832268 | 1.041433e-55 | 1.158020e-52 |
| MsG0180005705.01 | MsG0780039252.01 | 0.803873 | 2.831404e-49 | 1.438928e-46 |
| MsG0180005705.01 | MsG0780040704.01 | 0.816045 | 6.768584e-52 | 4.745153e-49 |
| MsG0180005705.01 | MsG0780040788.01 | 0.824676 | 7.095094e-54 | 6.328620e-51 |
| MsG0180005705.01 | MsG0880042161.01 | 0.833934 | 4.008691e-56 | 4.686290e-53 |
| MsG0180005705.01 | MsG0880043941.01 | 0.803593 | 3.236850e-49 | 1.633161e-46 |
| MsG0180005705.01 | MsG0880044573.01 | 0.805706 | 1.173002e-49 | 6.249102e-47 |
| MsG0180005705.01 | MsG0880044574.01 | 0.825676 | 4.117446e-54 | 3.778473e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005705.01.T01 | MTR_1g052045 | 60.559 | 322 | 75 | 3 | 1 | 322 | 1 | 270 | 2.40e-103 | 318 |
| MsG0180005705.01.T01 | MTR_6g053150 | 60.000 | 265 | 51 | 2 | 430 | 639 | 1 | 265 | 1.55e-96 | 300 |
| MsG0180005705.01.T01 | MTR_6g039030 | 65.942 | 138 | 47 | 0 | 396 | 533 | 23 | 160 | 2.79e-53 | 182 |
| MsG0180005705.01.T01 | MTR_1g057850 | 63.057 | 157 | 52 | 1 | 77 | 233 | 24 | 174 | 5.86e-49 | 182 |
| MsG0180005705.01.T01 | MTR_3g049870 | 66.917 | 133 | 27 | 3 | 3 | 133 | 75 | 192 | 4.86e-47 | 168 |
| MsG0180005705.01.T01 | MTR_0439s0040 | 83.333 | 90 | 15 | 0 | 1 | 90 | 31 | 120 | 5.19e-47 | 163 |
| MsG0180005705.01.T01 | MTR_6g016455 | 72.277 | 101 | 28 | 0 | 1 | 101 | 54 | 154 | 2.32e-41 | 150 |
| MsG0180005705.01.T01 | MTR_5g073300 | 45.055 | 182 | 76 | 3 | 1 | 182 | 53 | 210 | 1.65e-38 | 143 |
| MsG0180005705.01.T01 | MTR_3g408370 | 67.021 | 94 | 30 | 1 | 1 | 94 | 6 | 98 | 1.55e-35 | 132 |
| MsG0180005705.01.T01 | MTR_0003s0160 | 75.325 | 77 | 19 | 0 | 9 | 85 | 45 | 121 | 6.43e-35 | 129 |
| MsG0180005705.01.T01 | MTR_4g094808 | 56.637 | 113 | 20 | 1 | 588 | 671 | 1 | 113 | 4.75e-34 | 134 |
| MsG0180005705.01.T01 | MTR_0389s0050 | 67.000 | 100 | 29 | 1 | 223 | 322 | 1 | 96 | 5.31e-34 | 127 |
| MsG0180005705.01.T01 | MTR_0389s0050 | 82.609 | 46 | 8 | 0 | 569 | 614 | 98 | 143 | 2.10e-20 | 88.6 |
| MsG0180005705.01.T01 | MTR_4g033190 | 72.973 | 74 | 20 | 0 | 664 | 737 | 109 | 182 | 1.83e-28 | 118 |
| MsG0180005705.01.T01 | MTR_4g033045 | 74.648 | 71 | 18 | 0 | 667 | 737 | 105 | 175 | 2.48e-28 | 112 |
| MsG0180005705.01.T01 | MTR_8g058830 | 81.967 | 61 | 11 | 0 | 1 | 61 | 1 | 61 | 2.96e-28 | 112 |
| MsG0180005705.01.T01 | MTR_8g468060 | 60.000 | 90 | 35 | 1 | 1 | 90 | 66 | 154 | 1.18e-25 | 103 |
| MsG0180005705.01.T01 | MTR_1684s0010 | 58.537 | 82 | 16 | 1 | 588 | 651 | 1 | 82 | 4.50e-25 | 100 |
| MsG0180005705.01.T01 | MTR_2g449760 | 44.516 | 155 | 72 | 1 | 430 | 570 | 1 | 155 | 1.53e-24 | 102 |
| MsG0180005705.01.T01 | MTR_0758s0030 | 72.000 | 75 | 21 | 0 | 1 | 75 | 41 | 115 | 1.84e-23 | 96.3 |
| MsG0180005705.01.T01 | MTR_8g468190 | 67.213 | 61 | 20 | 0 | 1 | 61 | 53 | 113 | 4.06e-21 | 90.5 |
| MsG0180005705.01.T01 | MTR_0412s0010 | 47.778 | 90 | 46 | 1 | 1 | 90 | 27 | 115 | 1.64e-20 | 88.2 |
| MsG0180005705.01.T01 | MTR_0014s0300 | 46.667 | 90 | 29 | 1 | 574 | 644 | 38 | 127 | 3.27e-20 | 89.0 |
| MsG0180005705.01.T01 | MTR_2g450380 | 81.633 | 49 | 9 | 0 | 569 | 617 | 123 | 171 | 3.44e-20 | 89.4 |
| MsG0180005705.01.T01 | MTR_5g038070 | 60.606 | 66 | 26 | 0 | 665 | 730 | 18 | 83 | 1.63e-18 | 82.4 |
| MsG0180005705.01.T01 | MTR_1g054790 | 36.641 | 131 | 35 | 1 | 196 | 326 | 18 | 100 | 2.94e-18 | 82.0 |
| MsG0180005705.01.T01 | MTR_1g054790 | 77.143 | 35 | 8 | 0 | 569 | 603 | 98 | 132 | 7.96e-11 | 60.8 |
| MsG0180005705.01.T01 | MTR_1g052980 | 32.195 | 205 | 64 | 5 | 505 | 663 | 1 | 176 | 3.59e-17 | 81.3 |
| MsG0180005705.01.T01 | MTR_5g060700 | 37.908 | 153 | 51 | 2 | 480 | 588 | 8 | 160 | 4.17e-16 | 77.0 |
| MsG0180005705.01.T01 | MTR_8g465660 | 31.298 | 131 | 71 | 1 | 578 | 689 | 78 | 208 | 2.04e-12 | 70.1 |
| MsG0180005705.01.T01 | MTR_6g053160 | 35.338 | 133 | 52 | 5 | 533 | 641 | 33 | 155 | 3.03e-12 | 70.5 |
| MsG0180005705.01.T01 | MTR_4g052830 | 36.538 | 104 | 58 | 2 | 557 | 657 | 54 | 152 | 8.44e-12 | 64.3 |
| MsG0180005705.01.T01 | MTR_2g062630 | 53.012 | 83 | 25 | 3 | 644 | 726 | 28 | 96 | 1.12e-11 | 65.1 |
| MsG0180005705.01.T01 | MTR_2g038570 | 53.448 | 58 | 27 | 0 | 120 | 177 | 40 | 97 | 1.18e-11 | 62.0 |
| MsG0180005705.01.T01 | MTR_7g029280 | 44.000 | 75 | 38 | 1 | 207 | 281 | 341 | 411 | 1.72e-11 | 67.4 |
| MsG0180005705.01.T01 | MTR_4g038410 | 60.000 | 40 | 16 | 0 | 664 | 703 | 12 | 51 | 7.88e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 171 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCTTTCCTTGAGCTTC+TGG | 0.129885 | 1:+95212087 | None:intergenic |
| TTACTCCATATTGATTTATT+TGG | 0.140248 | 1:-95210348 | MsG0180005705.01.T01:CDS |
| AAGTTCATCTCTGGGAATTT+TGG | 0.166354 | 1:+95211775 | None:intergenic |
| GCAATTTCATGATTACTTAA+AGG | 0.191285 | 1:+95211530 | None:intergenic |
| GCAGATTAAGCAGAGTTTAA+TGG | 0.192027 | 1:-95211942 | MsG0180005705.01.T01:CDS |
| TTGTAGAGTTTCCTCAGTTC+TGG | 0.235992 | 1:+95212728 | None:intergenic |
| TCCTCAATGGCAGTCACTTT+TGG | 0.239727 | 1:+95212388 | None:intergenic |
| GCTTCTGATGATGTGGCTTC+TGG | 0.245844 | 1:+95214220 | None:intergenic |
| GCCTTTGACTTAGAGTTCTT+TGG | 0.270697 | 1:+95211257 | None:intergenic |
| TGAGCCTAGATGAAGAATTA+TGG | 0.274592 | 1:-95212826 | MsG0180005705.01.T01:CDS |
| AATGGCAACCTGGGATGATT+TGG | 0.274767 | 1:-95211924 | MsG0180005705.01.T01:CDS |
| CATCTTCATGTACTCTGCTT+TGG | 0.283797 | 1:+95212664 | None:intergenic |
| ATCTTCATGTACTCTGCTTT+GGG | 0.291328 | 1:+95212665 | None:intergenic |
| TGAAGAATTATGGGATATTC+TGG | 0.294066 | 1:-95212816 | MsG0180005705.01.T01:CDS |
| TCCAGTTGATCTTCAGCTTC+TGG | 0.294326 | 1:+95214097 | None:intergenic |
| GATCCTAACCTTTGAAATCT+TGG | 0.297220 | 1:+95211217 | None:intergenic |
| GAGAAACTTTCTGTTCTTCT+TGG | 0.301378 | 1:+95212126 | None:intergenic |
| CTTCTGGACCTCTTGTCTTC+AGG | 0.312293 | 1:+95214236 | None:intergenic |
| GCTTCTGGAGTTACCCCTTT+TGG | 0.315220 | 1:+95212102 | None:intergenic |
| GCCTTAGAACTAGAAGCTTC+AGG | 0.317289 | 1:+95211296 | None:intergenic |
| TATCCTCCTCCTACTGGTTC+TGG | 0.321221 | 1:-95212980 | MsG0180005705.01.T01:five_prime_UTR |
| AAGAACAATGGCAGAGGAAT+TGG | 0.322569 | 1:-95211440 | MsG0180005705.01.T01:CDS |
| ACATTGCAAAAGCTGTCTAT+TGG | 0.325127 | 1:-95214044 | MsG0180005705.01.T01:five_prime_UTR |
| TGAGGTTGAAACAATGTCTT+TGG | 0.328444 | 1:+95210383 | None:intergenic |
| TCCTGGAAGGTTAGTACTTA+AGG | 0.332619 | 1:+95211022 | None:intergenic |
| ACCTGAAGCTTCTAGTTCTA+AGG | 0.336975 | 1:-95211297 | MsG0180005705.01.T01:CDS |
| TACCTATGATCTTGCCTGTC+TGG | 0.339407 | 1:+95210820 | None:intergenic |
| GAGGGAGGAAATGTGAAGTT+TGG | 0.348456 | 1:-95210849 | MsG0180005705.01.T01:CDS |
| ATCTGCTTCTTGAATTTGCT+TGG | 0.358111 | 1:+95211959 | None:intergenic |
| GTTTCCAACTCAGCCCCTTC+TGG | 0.370509 | 1:+95211335 | None:intergenic |
| CAGTGAGTACTGCATCCTTA+TGG | 0.370827 | 1:-95210323 | MsG0180005705.01.T01:CDS |
| TTCCTCCCTCTTTCATTGTT+AGG | 0.380267 | 1:+95210862 | None:intergenic |
| GAAGGCATGTGCTTGCAATT+TGG | 0.381102 | 1:-95213963 | MsG0180005705.01.T01:five_prime_UTR |
| CTCAAACAGACTTCAATATC+TGG | 0.384522 | 1:-95212149 | MsG0180005705.01.T01:CDS |
| GATGATTTGGGTAGTGAATC+TGG | 0.388504 | 1:-95211911 | MsG0180005705.01.T01:CDS |
| GCCTTAAGTACTAACCTTCC+AGG | 0.389164 | 1:-95211023 | MsG0180005705.01.T01:CDS |
| TGACTCAACAAGTTCATCTC+TGG | 0.389607 | 1:+95211766 | None:intergenic |
| ACCAGAAGCTGAAGATCAAC+TGG | 0.394117 | 1:-95214098 | MsG0180005705.01.T01:five_prime_UTR |
| CATGTACTCTGCTTTGGGTA+TGG | 0.399659 | 1:+95212670 | None:intergenic |
| TGTACCTTGTGCTGTGAGTT+GGG | 0.399707 | 1:+95211062 | None:intergenic |
| CTTGTTGATTACTGTACAGT+TGG | 0.400694 | 1:+95210675 | None:intergenic |
| AGGTACCATGATCTTTGCTT+TGG | 0.407640 | 1:+95210936 | None:intergenic |
| TGAACCAGATGCTGCTGAAA+TGG | 0.408898 | 1:-95212179 | MsG0180005705.01.T01:CDS |
| ATGGCAACCTGGGATGATTT+GGG | 0.411643 | 1:-95211923 | MsG0180005705.01.T01:CDS |
| TTTAGGTACCCATTGTCCTA+TGG | 0.412864 | 1:+95210998 | None:intergenic |
| TCAGCATCTCCATTGAACTT+TGG | 0.415028 | 1:+95212890 | None:intergenic |
| ATTCCAAGATTTCAAAGGTT+AGG | 0.415255 | 1:-95211220 | MsG0180005705.01.T01:CDS |
| TTCACCAGACTCTGAGGAAT+AGG | 0.416815 | 1:+95211179 | None:intergenic |
| TTGTACCTTGTGCTGTGAGT+TGG | 0.418241 | 1:+95211061 | None:intergenic |
| AGAAGGTGGGACATGCTAAC+TGG | 0.420487 | 1:-95210527 | MsG0180005705.01.T01:CDS |
| CTGGTCCAAATAAATCAATA+TGG | 0.422404 | 1:+95210343 | None:intergenic |
| GAGCCTAGATGAAGAATTAT+GGG | 0.424590 | 1:-95212825 | MsG0180005705.01.T01:CDS |
| GTCATTTCAAAGGTGTTTGA+AGG | 0.427320 | 1:-95213981 | MsG0180005705.01.T01:five_prime_UTR |
| ATGGCCATTTCAGCAGCATC+TGG | 0.437422 | 1:+95212175 | None:intergenic |
| AAAACACAGCAGAAAATTAG+TGG | 0.439533 | 1:-95214016 | MsG0180005705.01.T01:five_prime_UTR |
| TCTCTCTGTTCAAATTATGA+AGG | 0.441773 | 1:-95212608 | MsG0180005705.01.T01:CDS |
| AGTAAGAACCAATGAGTTGA+AGG | 0.443600 | 1:-95211717 | MsG0180005705.01.T01:CDS |
| ACTCCATATTTACTTCCATA+AGG | 0.444055 | 1:+95210308 | None:intergenic |
| AAAATTGACTAATGCTCAAA+AGG | 0.445120 | 1:+95210731 | None:intergenic |
| CCTCTTTCATTGTTAGGCTG+AGG | 0.446230 | 1:+95210868 | None:intergenic |
| ACAGAAAGTTTCTCGCCAAA+AGG | 0.446958 | 1:-95212117 | MsG0180005705.01.T01:CDS |
| TTCACAACAAGACTTTAGAT+TGG | 0.448027 | 1:+95211391 | None:intergenic |
| CAGAAAGTTTCTCGCCAAAA+GGG | 0.451731 | 1:-95212116 | MsG0180005705.01.T01:CDS |
| AGCTTCTGAACAAGGACTTA+GGG | 0.451901 | 1:-95211633 | MsG0180005705.01.T01:CDS |
| AGACAAATCCATTGTGTTCA+AGG | 0.452901 | 1:-95210650 | MsG0180005705.01.T01:CDS |
| GGAAAAGTTCCAAAGTTCAA+TGG | 0.457730 | 1:-95212899 | MsG0180005705.01.T01:five_prime_UTR |
| TTGTTGATTACTGTACAGTT+GGG | 0.461172 | 1:+95210676 | None:intergenic |
| ACCCATTGTCCTATGGGTCC+TGG | 0.464924 | 1:+95211005 | None:intergenic |
| AAGCTTCTGAACAAGGACTT+AGG | 0.472327 | 1:-95211634 | MsG0180005705.01.T01:CDS |
| TATCCCATAATTCTTCATCT+AGG | 0.472419 | 1:+95212822 | None:intergenic |
| CTCAAGGAAAGAAGATCAGA+AGG | 0.474834 | 1:-95212080 | MsG0180005705.01.T01:CDS |
| CATGTCTATCCTCCTCCTAC+TGG | 0.476884 | 1:-95212986 | MsG0180005705.01.T01:five_prime_UTR |
| CATTGTTAGGCTGAGGAACA+TGG | 0.482472 | 1:+95210875 | None:intergenic |
| TCCAGGACCCATAGGACAAT+GGG | 0.482633 | 1:-95211006 | MsG0180005705.01.T01:CDS |
| AGTAAGTTACAACTTGTGAA+AGG | 0.486929 | 1:-95210486 | MsG0180005705.01.T01:CDS |
| GTAAGTTACAACTTGTGAAA+GGG | 0.487395 | 1:-95210485 | MsG0180005705.01.T01:CDS |
| TTGAAGTCTGTTTGAGAGCA+TGG | 0.488368 | 1:+95212156 | None:intergenic |
| GCAGCTTCTGCAGCTTCTGA+TGG | 0.488980 | 1:+95214169 | None:intergenic |
| AGAACCTATTCCTCAGAGTC+TGG | 0.492685 | 1:-95211183 | MsG0180005705.01.T01:intron |
| GACTCAACAAGTTCATCTCT+GGG | 0.495759 | 1:+95211767 | None:intergenic |
| TTTGATGACTTGCCTTTGGA+TGG | 0.496542 | 1:+95212253 | None:intergenic |
| TTAGGTACCCATTGTCCTAT+GGG | 0.504071 | 1:+95210999 | None:intergenic |
| TGTACCAGAAGGGGCTGAGT+TGG | 0.509420 | 1:-95211339 | MsG0180005705.01.T01:CDS |
| CATTGCAACGGTCATTTCAA+AGG | 0.513070 | 1:-95213991 | MsG0180005705.01.T01:five_prime_UTR |
| GCAACAGCAACTTCAGAAGC+TGG | 0.520308 | 1:-95211836 | MsG0180005705.01.T01:CDS |
| CATAAGGATGCAGTACTCAC+TGG | 0.520685 | 1:+95210324 | None:intergenic |
| GGAGGAAATGTGAAGTTTGG+AGG | 0.526400 | 1:-95210846 | MsG0180005705.01.T01:CDS |
| TCAATATGGAGTAATTCTAA+AGG | 0.529305 | 1:+95210357 | None:intergenic |
| AACCAGACAGGCAAGATCAT+AGG | 0.530534 | 1:-95210822 | MsG0180005705.01.T01:intron |
| ATGCTTCAACTGTAAGAAGC+CGG | 0.532308 | 1:-95212056 | MsG0180005705.01.T01:CDS |
| AGCAGAGTTTAATGGCAACC+TGG | 0.532794 | 1:-95211934 | MsG0180005705.01.T01:CDS |
| GAAGCTGCATCATCAGAAGT+TGG | 0.533132 | 1:-95214202 | MsG0180005705.01.T01:five_prime_UTR |
| AAAACATTCTTTGTACCAGA+AGG | 0.534473 | 1:-95211350 | MsG0180005705.01.T01:CDS |
| CATGATGTAACTGTAAAAGT+TGG | 0.536668 | 1:+95212847 | None:intergenic |
| TGCTTCAACTGTAAGAAGCC+GGG | 0.536760 | 1:-95212055 | MsG0180005705.01.T01:CDS |
| CAAGAAGGTCAAAGAAGCAA+AGG | 0.537173 | 1:-95212582 | MsG0180005705.01.T01:CDS |
| TTATGGGATATTCTGGAAGA+TGG | 0.538253 | 1:-95212809 | MsG0180005705.01.T01:CDS |
| TAAATCTTTAGCTTCCTCAA+TGG | 0.539129 | 1:+95212375 | None:intergenic |
| ACCAAAAGTGACTGCCATTG+AGG | 0.541789 | 1:-95212389 | MsG0180005705.01.T01:CDS |
| GATAGTAAGAAAACCAGTGT+TGG | 0.541975 | 1:-95212920 | MsG0180005705.01.T01:five_prime_UTR |
| GAGATGCTGAAGAGTTCTCT+TGG | 0.543033 | 1:-95212877 | MsG0180005705.01.T01:five_prime_UTR |
| TCTGAATGATAGTCAATGTC+TGG | 0.544597 | 1:+95210459 | None:intergenic |
| GATTTAGTCCTTGATGAAGA+AGG | 0.545046 | 1:-95212779 | MsG0180005705.01.T01:CDS |
| GGAAGCTGATGAAGATGCAA+AGG | 0.548159 | 1:-95211876 | MsG0180005705.01.T01:CDS |
| GACAAATCCATTGTGTTCAA+GGG | 0.548420 | 1:-95210649 | MsG0180005705.01.T01:CDS |
| AAACATATGAAGATCAGCTC+AGG | 0.548476 | 1:-95211592 | MsG0180005705.01.T01:CDS |
| CAAAGTGGTTGAATCTGAAG+AGG | 0.549398 | 1:-95212224 | MsG0180005705.01.T01:CDS |
| CCTCAGCCTAACAATGAAAG+AGG | 0.550994 | 1:-95210868 | MsG0180005705.01.T01:CDS |
| GCCAAAGAACTCTAAGTCAA+AGG | 0.552526 | 1:-95211258 | MsG0180005705.01.T01:CDS |
| ATCTGATTCCAAGATTTCAA+AGG | 0.552675 | 1:-95211225 | MsG0180005705.01.T01:CDS |
| TGCAAAGGTAGCTGTTGGGT+TGG | 0.556517 | 1:-95211861 | MsG0180005705.01.T01:CDS |
| AACATTCTTTGTACCAGAAG+GGG | 0.557216 | 1:-95211348 | MsG0180005705.01.T01:CDS |
| CTCTCTGTTCAAATTATGAA+GGG | 0.558051 | 1:-95212607 | MsG0180005705.01.T01:CDS |
| TTCACTACCCAAATCATCCC+AGG | 0.560036 | 1:+95211916 | None:intergenic |
| TGAATCTGGATCTGATAAAG+AGG | 0.560710 | 1:-95211897 | MsG0180005705.01.T01:CDS |
| GTCTTGAGCAACCGCTGTCT+AGG | 0.563118 | 1:+95210916 | None:intergenic |
| CATTCAGCAATGAAGTGTCC+CGG | 0.564311 | 1:+95212037 | None:intergenic |
| TCTCTTTCCCTTGAACACAA+TGG | 0.566708 | 1:+95210642 | None:intergenic |
| GATCTGAAAGCTTCTGAACA+AGG | 0.567975 | 1:-95211641 | MsG0180005705.01.T01:CDS |
| CAGCAGCTCCTTCTTCATCA+AGG | 0.571109 | 1:+95212771 | None:intergenic |
| AAGTTTGGAGGAAACCAGAC+AGG | 0.571154 | 1:-95210834 | MsG0180005705.01.T01:CDS |
| AAACATTCTTTGTACCAGAA+GGG | 0.571723 | 1:-95211349 | MsG0180005705.01.T01:CDS |
| GAGTAATTCTAAAGGTCTTG+AGG | 0.572266 | 1:+95210365 | None:intergenic |
| TGATGAAGAAGGAGCTGCTG+TGG | 0.575095 | 1:-95212768 | MsG0180005705.01.T01:CDS |
| GCAGAGTTTAATGGCAACCT+GGG | 0.576363 | 1:-95211933 | MsG0180005705.01.T01:CDS |
| TGATGCAGCTTCTGATGATG+TGG | 0.586400 | 1:+95214213 | None:intergenic |
| TCAGAAGCTTACCTGCCAGA+TGG | 0.586984 | 1:-95212414 | MsG0180005705.01.T01:CDS |
| GCTTCTGAACAAGGACTTAG+GGG | 0.592709 | 1:-95211632 | MsG0180005705.01.T01:CDS |
| AGCAAACATAGCTTTAGCAG+TGG | 0.595848 | 1:+95212631 | None:intergenic |
| TCAATAGCTCTTCCATCCAA+AGG | 0.598002 | 1:-95212265 | MsG0180005705.01.T01:CDS |
| CAGTGCCAAAGCAAAGATCA+TGG | 0.598125 | 1:-95210941 | MsG0180005705.01.T01:CDS |
| TTCCAGGACCCATAGGACAA+TGG | 0.598588 | 1:-95211007 | MsG0180005705.01.T01:CDS |
| TATAGCATTTACAAGAACAA+TGG | 0.599450 | 1:-95211452 | MsG0180005705.01.T01:CDS |
| TCACCAGAACCAGTAGGAGG+AGG | 0.600126 | 1:+95212977 | None:intergenic |
| ATGCTGAAGAGTTCTCTTGG+TGG | 0.602563 | 1:-95212874 | MsG0180005705.01.T01:five_prime_UTR |
| GAAGATGCAAAGGTAGCTGT+TGG | 0.606649 | 1:-95211866 | MsG0180005705.01.T01:CDS |
| ACTAACCTTCCAGGACCCAT+AGG | 0.607094 | 1:-95211014 | MsG0180005705.01.T01:CDS |
| GTCTTGTTGTGAATGCATCA+AGG | 0.609062 | 1:-95211381 | MsG0180005705.01.T01:CDS |
| GCAACCCAACTCACAGCACA+AGG | 0.610254 | 1:-95211066 | MsG0180005705.01.T01:CDS |
| CTAGTATCACCAGAACCAGT+AGG | 0.611103 | 1:+95212971 | None:intergenic |
| ATTTACAAGAACAATGGCAG+AGG | 0.611977 | 1:-95211446 | MsG0180005705.01.T01:CDS |
| AAGAAGCATCATATTATCAG+AGG | 0.613572 | 1:-95212707 | MsG0180005705.01.T01:CDS |
| ACTCATACTGATGTACAAGC+AGG | 0.618487 | 1:+95212557 | None:intergenic |
| AGAAAGTTTCTCGCCAAAAG+GGG | 0.619404 | 1:-95212115 | MsG0180005705.01.T01:CDS |
| AAGATGCAAAGGTAGCTGTT+GGG | 0.620398 | 1:-95211865 | MsG0180005705.01.T01:CDS |
| ATAGTGCTCCTGAAGACAAG+AGG | 0.620594 | 1:-95214244 | None:intergenic |
| ATTGTCCTATGGGTCCTGGA+AGG | 0.622255 | 1:+95211009 | None:intergenic |
| GGTTGCTCAAGACACATGAC+AGG | 0.624146 | 1:-95210906 | MsG0180005705.01.T01:CDS |
| TGTTGTGAATGCATCAAGGA+AGG | 0.625416 | 1:-95211377 | MsG0180005705.01.T01:CDS |
| ATGGATGTGGCACAGAAGGT+GGG | 0.625621 | 1:-95210540 | MsG0180005705.01.T01:intron |
| TTTGGTTTCACCAGACTCTG+AGG | 0.628044 | 1:+95211173 | None:intergenic |
| TCTGTGGTGCATGTCAGAGA+GGG | 0.631647 | 1:-95210431 | MsG0180005705.01.T01:CDS |
| GTCATCAAAAGCTCTCAAAG+TGG | 0.634736 | 1:-95212239 | MsG0180005705.01.T01:CDS |
| AAATTATGAAGGGAGCAAGA+AGG | 0.637480 | 1:-95212597 | MsG0180005705.01.T01:CDS |
| TGGTGAAATGACTTCTGATG+AGG | 0.640298 | 1:+95214117 | None:intergenic |
| AGTCAAAGGACAAGTCAAAG+AGG | 0.649315 | 1:-95211994 | MsG0180005705.01.T01:CDS |
| CTCAGCCTAACAATGAAAGA+GGG | 0.653555 | 1:-95210867 | MsG0180005705.01.T01:CDS |
| GTATCACCAGAACCAGTAGG+AGG | 0.654189 | 1:+95212974 | None:intergenic |
| AGCCTAACAATGAAAGAGGG+AGG | 0.655223 | 1:-95210864 | MsG0180005705.01.T01:CDS |
| TCAAGGAAAGAAGATCAGAA+GGG | 0.657843 | 1:-95212079 | MsG0180005705.01.T01:CDS |
| TCTTCAAAGAGAAAAGTCAA+AGG | 0.658023 | 1:-95212008 | MsG0180005705.01.T01:CDS |
| GGGGTAACTCCAGAAGCTCA+AGG | 0.659496 | 1:-95212096 | MsG0180005705.01.T01:CDS |
| CTCTGTGGTGCATGTCAGAG+AGG | 0.662570 | 1:-95210432 | MsG0180005705.01.T01:CDS |
| GATATTCTGGAAGATGGTGT+TGG | 0.673336 | 1:-95212803 | MsG0180005705.01.T01:CDS |
| AAATTAGTGGAACATTGCAA+CGG | 0.676701 | 1:-95214003 | MsG0180005705.01.T01:five_prime_UTR |
| CAACTGTACAGTAATCAACA+AGG | 0.676707 | 1:-95210674 | MsG0180005705.01.T01:CDS |
| AGGTGGGACATGCTAACTGG+AGG | 0.689927 | 1:-95210524 | MsG0180005705.01.T01:CDS |
| AGAAACATACTCCAGAACTG+AGG | 0.695172 | 1:-95212739 | MsG0180005705.01.T01:CDS |
| TATCATTCAGATGCACTCTG+TGG | 0.721311 | 1:-95210447 | MsG0180005705.01.T01:CDS |
| AGATCATGGTACCTAGACAG+CGG | 0.739159 | 1:-95210927 | MsG0180005705.01.T01:CDS |
| AGACTCAGAAGATGAAAACG+AGG | 0.743197 | 1:-95211804 | MsG0180005705.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACACAGAAAATTGTTTA+AGG | + | Chr1:95211090-95211109 | None:intergenic | 20.0% |
| !!! | AAAAGAAAAATATGCTGATT+TGG | - | Chr1:95212862-95212881 | MsG0180005705.01.T01:five_prime_UTR | 20.0% |
| !!! | ATAAAATCAATTTTCTGAAC+TGG | - | Chr1:95213946-95213965 | MsG0180005705.01.T01:five_prime_UTR | 20.0% |
| !!! | ATTAGTCAATTTTGTGATAA+TGG | - | Chr1:95213831-95213850 | MsG0180005705.01.T01:intron | 20.0% |
| !!! | CTTGAAGATTTTATTATATC+TGG | - | Chr1:95213046-95213065 | MsG0180005705.01.T01:intron | 20.0% |
| !!! | TCATTGACATTTTTAGATTT+AGG | + | Chr1:95213574-95213593 | None:intergenic | 20.0% |
| !!! | TTACTCCATATTGATTTATT+TGG | - | Chr1:95214204-95214223 | MsG0180005705.01.T01:five_prime_UTR | 20.0% |
| ! | AAAATTGACTAATGCTCAAA+AGG | + | Chr1:95213824-95213843 | None:intergenic | 25.0% |
| ! | CAACCATACATTATTAATTG+AGG | + | Chr1:95213781-95213800 | None:intergenic | 25.0% |
| ! | CTACCTCAATTAATAATGTA+TGG | - | Chr1:95213775-95213794 | MsG0180005705.01.T01:intron | 25.0% |
| ! | CTCAATTAATAATGTATGGT+TGG | - | Chr1:95213779-95213798 | MsG0180005705.01.T01:intron | 25.0% |
| ! | GCAATTTCATGATTACTTAA+AGG | + | Chr1:95213025-95213044 | None:intergenic | 25.0% |
| ! | TACATTATTAATTGAGGTAG+AGG | + | Chr1:95213775-95213794 | None:intergenic | 25.0% |
| ! | TATAGCATTTACAAGAACAA+TGG | - | Chr1:95213100-95213119 | MsG0180005705.01.T01:intron | 25.0% |
| ! | TATCAGTGAATGATAAGAAA+TGG | - | Chr1:95213993-95214012 | MsG0180005705.01.T01:five_prime_UTR | 25.0% |
| ! | TCAATATGGAGTAATTCTAA+AGG | + | Chr1:95214198-95214217 | None:intergenic | 25.0% |
| !! | ATAAGGAATGGATTTCAAAT+TGG | - | Chr1:95210742-95210761 | MsG0180005705.01.T01:CDS | 25.0% |
| !! | ATTTCAAATTGGTTCTTCAT+AGG | - | Chr1:95210753-95210772 | MsG0180005705.01.T01:intron | 25.0% |
| !! | TTTTAAATCCTTCAACTCAT+TGG | + | Chr1:95212846-95212865 | None:intergenic | 25.0% |
| !!! | CTGTGTAATTTTGTTTAGTT+AGG | - | Chr1:95211101-95211120 | MsG0180005705.01.T01:intron | 25.0% |
| AAAACACAGCAGAAAATTAG+TGG | - | Chr1:95210536-95210555 | MsG0180005705.01.T01:intron | 30.0% | |
| AAAACATTCTTTGTACCAGA+AGG | - | Chr1:95213202-95213221 | MsG0180005705.01.T01:intron | 30.0% | |
| AAACATTCTTTGTACCAGAA+GGG | - | Chr1:95213203-95213222 | MsG0180005705.01.T01:intron | 30.0% | |
| AAATTAGTGGAACATTGCAA+CGG | - | Chr1:95210549-95210568 | MsG0180005705.01.T01:intron | 30.0% | |
| AACACTTGATATACAATCAG+AGG | + | Chr1:95211064-95211083 | None:intergenic | 30.0% | |
| ACAGCAAAAATCAACTCTAT+TGG | - | Chr1:95212889-95212908 | MsG0180005705.01.T01:five_prime_UTR | 30.0% | |
| AGTAAGTTACAACTTGTGAA+AGG | - | Chr1:95214066-95214085 | MsG0180005705.01.T01:five_prime_UTR | 30.0% | |
| ATCTGATTCCAAGATTTCAA+AGG | - | Chr1:95213327-95213346 | MsG0180005705.01.T01:intron | 30.0% | |
| ATTACTCTTAGTGAAATCCT+TGG | - | Chr1:95211249-95211268 | MsG0180005705.01.T01:CDS | 30.0% | |
| ATTCCAAGATTTCAAAGGTT+AGG | - | Chr1:95213332-95213351 | MsG0180005705.01.T01:intron | 30.0% | |
| CATATATGTTCCTTTGGATA+AGG | - | Chr1:95210725-95210744 | MsG0180005705.01.T01:CDS | 30.0% | |
| CATGATGTAACTGTAAAAGT+TGG | + | Chr1:95211708-95211727 | None:intergenic | 30.0% | |
| CTCTCTGTTCAAATTATGAA+GGG | - | Chr1:95211945-95211964 | MsG0180005705.01.T01:CDS | 30.0% | |
| CTGGTCCAAATAAATCAATA+TGG | + | Chr1:95214212-95214231 | None:intergenic | 30.0% | |
| GTAAGTTACAACTTGTGAAA+GGG | - | Chr1:95214067-95214086 | MsG0180005705.01.T01:five_prime_UTR | 30.0% | |
| GTATGAGTTATTCAAGATGA+AGG | - | Chr1:95212010-95212029 | MsG0180005705.01.T01:CDS | 30.0% | |
| TAATCAGAATCTAAATGCAG+CGG | + | Chr1:95211364-95211383 | None:intergenic | 30.0% | |
| TATCCCATAATTCTTCATCT+AGG | + | Chr1:95211733-95211752 | None:intergenic | 30.0% | |
| TCTAAAAATGTCAATGATGC+AGG | - | Chr1:95213577-95213596 | MsG0180005705.01.T01:intron | 30.0% | |
| TCTCTCTGTTCAAATTATGA+AGG | - | Chr1:95211944-95211963 | MsG0180005705.01.T01:CDS | 30.0% | |
| TCTTATCATTCACTGATAGT+AGG | + | Chr1:95213991-95214010 | None:intergenic | 30.0% | |
| TCTTCAAAGAGAAAAGTCAA+AGG | - | Chr1:95212544-95212563 | MsG0180005705.01.T01:intron | 30.0% | |
| TCTTTCACACCTCTATATAA+AGG | - | Chr1:95210861-95210880 | MsG0180005705.01.T01:CDS | 30.0% | |
| TGAAGAATTATGGGATATTC+TGG | - | Chr1:95211736-95211755 | MsG0180005705.01.T01:CDS | 30.0% | |
| TGAATGATAAGAAATGGATG+TGG | - | Chr1:95213999-95214018 | MsG0180005705.01.T01:five_prime_UTR | 30.0% | |
| TTCACAACAAGACTTTAGAT+TGG | + | Chr1:95213164-95213183 | None:intergenic | 30.0% | |
| ! | TAAATCTTTAGCTTCCTCAA+TGG | + | Chr1:95212180-95212199 | None:intergenic | 30.0% |
| ! | TTGTTGATTACTGTACAGTT+GGG | + | Chr1:95213879-95213898 | None:intergenic | 30.0% |
| !! | AAGAAGCATCATATTATCAG+AGG | - | Chr1:95211845-95211864 | MsG0180005705.01.T01:CDS | 30.0% |
| !! | AATAATGTATGGTTGGTAGA+TGG | - | Chr1:95213786-95213805 | MsG0180005705.01.T01:intron | 30.0% |
| !! | ACTTTTCTCTTTGAAGATCA+GGG | + | Chr1:95212541-95212560 | None:intergenic | 30.0% |
| AAACATATGAAGATCAGCTC+AGG | - | Chr1:95212960-95212979 | MsG0180005705.01.T01:five_prime_UTR | 35.0% | |
| AAATTATGAAGGGAGCAAGA+AGG | - | Chr1:95211955-95211974 | MsG0180005705.01.T01:CDS | 35.0% | |
| AACATTCTTTGTACCAGAAG+GGG | - | Chr1:95213204-95213223 | MsG0180005705.01.T01:intron | 35.0% | |
| AAGAAAACAGCTCCAGAATA+CGG | - | Chr1:95210693-95210712 | MsG0180005705.01.T01:CDS | 35.0% | |
| AAGGTGAGAAAAACACAAGA+AGG | + | Chr1:95211476-95211495 | None:intergenic | 35.0% | |
| ACATTGCAAAAGCTGTCTAT+TGG | - | Chr1:95210508-95210527 | MsG0180005705.01.T01:CDS | 35.0% | |
| ACGACACAAAGCAATTATAC+TGG | + | Chr1:95211317-95211336 | None:intergenic | 35.0% | |
| AGACAAATCCATTGTGTTCA+AGG | - | Chr1:95213902-95213921 | MsG0180005705.01.T01:intron | 35.0% | |
| AGGTGAGAAAAACACAAGAA+GGG | + | Chr1:95211475-95211494 | None:intergenic | 35.0% | |
| AGGTTTCAAACCTTAGTTTC+TGG | - | Chr1:95212062-95212081 | MsG0180005705.01.T01:CDS | 35.0% | |
| ATCATAGGTACAGGAACTAT+TGG | - | Chr1:95213745-95213764 | MsG0180005705.01.T01:intron | 35.0% | |
| ATCCAAAGGAACATATATGC+AGG | + | Chr1:95210724-95210743 | None:intergenic | 35.0% | |
| ATCTTCATGTACTCTGCTTT+GGG | + | Chr1:95211890-95211909 | None:intergenic | 35.0% | |
| ATGTTCCTTTGGATAAGGAA+TGG | - | Chr1:95210730-95210749 | MsG0180005705.01.T01:CDS | 35.0% | |
| ATTTACAAGAACAATGGCAG+AGG | - | Chr1:95213106-95213125 | MsG0180005705.01.T01:intron | 35.0% | |
| CAAATCAGATACAGACTCAA+TGG | + | Chr1:95211030-95211049 | None:intergenic | 35.0% | |
| CAACTGTACAGTAATCAACA+AGG | - | Chr1:95213878-95213897 | MsG0180005705.01.T01:intron | 35.0% | |
| CTCAAACAGACTTCAATATC+TGG | - | Chr1:95212403-95212422 | MsG0180005705.01.T01:CDS | 35.0% | |
| GAAATCCATTCCTTATCCAA+AGG | + | Chr1:95210738-95210757 | None:intergenic | 35.0% | |
| GAAGGATGATGAAACTATTG+AGG | - | Chr1:95212028-95212047 | MsG0180005705.01.T01:CDS | 35.0% | |
| GACAAATCCATTGTGTTCAA+GGG | - | Chr1:95213903-95213922 | MsG0180005705.01.T01:intron | 35.0% | |
| GAGAAACTTTCTGTTCTTCT+TGG | + | Chr1:95212429-95212448 | None:intergenic | 35.0% | |
| GAGCCTAGATGAAGAATTAT+GGG | - | Chr1:95211727-95211746 | MsG0180005705.01.T01:CDS | 35.0% | |
| GATAGTAAGAAAACCAGTGT+TGG | - | Chr1:95211632-95211651 | MsG0180005705.01.T01:CDS | 35.0% | |
| GATTTAGTCCTTGATGAAGA+AGG | - | Chr1:95211773-95211792 | MsG0180005705.01.T01:CDS | 35.0% | |
| GCAGATTAAGCAGAGTTTAA+TGG | - | Chr1:95212610-95212629 | MsG0180005705.01.T01:CDS | 35.0% | |
| GGAAAAGTTCCAAAGTTCAA+TGG | - | Chr1:95211653-95211672 | MsG0180005705.01.T01:CDS | 35.0% | |
| GGTTTCAAACCTTAGTTTCT+GGG | - | Chr1:95212063-95212082 | MsG0180005705.01.T01:CDS | 35.0% | |
| GTCTTCACTCCTTTATATAG+AGG | + | Chr1:95210873-95210892 | None:intergenic | 35.0% | |
| TCAAGGAAAGAAGATCAGAA+GGG | - | Chr1:95212473-95212492 | MsG0180005705.01.T01:intron | 35.0% | |
| TCTGAATGATAGTCAATGTC+TGG | + | Chr1:95214096-95214115 | None:intergenic | 35.0% | |
| TGAATCTGGATCTGATAAAG+AGG | - | Chr1:95212655-95212674 | MsG0180005705.01.T01:CDS | 35.0% | |
| TGAGCCTAGATGAAGAATTA+TGG | - | Chr1:95211726-95211745 | MsG0180005705.01.T01:CDS | 35.0% | |
| TGAGGTTGAAACAATGTCTT+TGG | + | Chr1:95214172-95214191 | None:intergenic | 35.0% | |
| TTCTGATTAACCATCACCTT+AGG | + | Chr1:95213466-95213485 | None:intergenic | 35.0% | |
| TTGATTGTGTTCTTGAGCAA+AGG | - | Chr1:95211158-95211177 | MsG0180005705.01.T01:intron | 35.0% | |
| ! | AGTAAGAACCAATGAGTTGA+AGG | - | Chr1:95212835-95212854 | MsG0180005705.01.T01:exon | 35.0% |
| ! | ATCTGCTTCTTGAATTTGCT+TGG | + | Chr1:95212596-95212615 | None:intergenic | 35.0% |
| ! | CTTGTTGATTACTGTACAGT+TGG | + | Chr1:95213880-95213899 | None:intergenic | 35.0% |
| ! | GAGTAATTCTAAAGGTCTTG+AGG | + | Chr1:95214190-95214209 | None:intergenic | 35.0% |
| ! | GTGTTTTTCTCACCTTCAAT+TGG | - | Chr1:95211480-95211499 | MsG0180005705.01.T01:CDS | 35.0% |
| ! | GTTTTCTCAAGTTTCACTTC+TGG | + | Chr1:95213142-95213161 | None:intergenic | 35.0% |
| ! | TGATCAGTGTGTTCAGTTTT+AGG | - | Chr1:95211413-95211432 | MsG0180005705.01.T01:CDS | 35.0% |
| ! | TTAACCATCACCTTAGGTTT+TGG | + | Chr1:95213460-95213479 | None:intergenic | 35.0% |
| ! | TTATGGGATATTCTGGAAGA+TGG | - | Chr1:95211743-95211762 | MsG0180005705.01.T01:CDS | 35.0% |
| !! | AAGTTCATCTCTGGGAATTT+TGG | + | Chr1:95212780-95212799 | None:intergenic | 35.0% |
| !! | GAATAGGTTCTGATCTTTTC+AGG | + | Chr1:95213360-95213379 | None:intergenic | 35.0% |
| !! | GACTTTTCTCTTTGAAGATC+AGG | + | Chr1:95212542-95212561 | None:intergenic | 35.0% |
| !! | GATCCTAACCTTTGAAATCT+TGG | + | Chr1:95213338-95213357 | None:intergenic | 35.0% |
| !! | GTCATTTCAAAGGTGTTTGA+AGG | - | Chr1:95210571-95210590 | MsG0180005705.01.T01:intron | 35.0% |
| !! | TTCTGAAGTACCAAAACCTA+AGG | - | Chr1:95213447-95213466 | MsG0180005705.01.T01:intron | 35.0% |
| AAGAACAATGGCAGAGGAAT+TGG | - | Chr1:95213112-95213131 | MsG0180005705.01.T01:intron | 40.0% | |
| AAGATGCAAAGGTAGCTGTT+GGG | - | Chr1:95212687-95212706 | MsG0180005705.01.T01:CDS | 40.0% | |
| AAGCTTCAACAACGACTCTT+TGG | - | Chr1:95210815-95210834 | MsG0180005705.01.T01:intron | 40.0% | |
| AAGCTTCTGAACAAGGACTT+AGG | - | Chr1:95212918-95212937 | MsG0180005705.01.T01:five_prime_UTR | 40.0% | |
| AAGTGTTACACAACAGACCA+AGG | + | Chr1:95211515-95211534 | None:intergenic | 40.0% | |
| AATCTGTAGCCCAGAAACTA+AGG | + | Chr1:95212075-95212094 | None:intergenic | 40.0% | |
| ACAGAAAGTTTCTCGCCAAA+AGG | - | Chr1:95212435-95212454 | MsG0180005705.01.T01:CDS | 40.0% | |
| ACTCATACTGATGTACAAGC+AGG | + | Chr1:95211998-95212017 | None:intergenic | 40.0% | |
| AGAAACATACTCCAGAACTG+AGG | - | Chr1:95211813-95211832 | MsG0180005705.01.T01:CDS | 40.0% | |
| AGAAAGTTTCTCGCCAAAAG+GGG | - | Chr1:95212437-95212456 | MsG0180005705.01.T01:CDS | 40.0% | |
| AGACTCAGAAGATGAAAACG+AGG | - | Chr1:95212748-95212767 | MsG0180005705.01.T01:CDS | 40.0% | |
| AGCTTCTGAACAAGGACTTA+GGG | - | Chr1:95212919-95212938 | MsG0180005705.01.T01:five_prime_UTR | 40.0% | |
| AGGTACCATGATCTTTGCTT+TGG | + | Chr1:95213619-95213638 | None:intergenic | 40.0% | |
| AGTACCAAAACCTAAGGTGA+TGG | - | Chr1:95213453-95213472 | MsG0180005705.01.T01:intron | 40.0% | |
| AGTCAAAGGACAAGTCAAAG+AGG | - | Chr1:95212558-95212577 | MsG0180005705.01.T01:intron | 40.0% | |
| AGTCTGGTGAAACCAAATCT+GGG | - | Chr1:95213385-95213404 | MsG0180005705.01.T01:intron | 40.0% | |
| ATCTTCTTTCCTTGAGCTTC+TGG | + | Chr1:95212468-95212487 | None:intergenic | 40.0% | |
| ATGCAGAACAATTTCAGCAG+AGG | + | Chr1:95210958-95210977 | None:intergenic | 40.0% | |
| ATGCTTCAACTGTAAGAAGC+CGG | - | Chr1:95212496-95212515 | MsG0180005705.01.T01:intron | 40.0% | |
| CAAAGTGGTTGAATCTGAAG+AGG | - | Chr1:95212328-95212347 | MsG0180005705.01.T01:CDS | 40.0% | |
| CAAGAAGGTCAAAGAAGCAA+AGG | - | Chr1:95211970-95211989 | MsG0180005705.01.T01:CDS | 40.0% | |
| CAGAAAGTTTCTCGCCAAAA+GGG | - | Chr1:95212436-95212455 | MsG0180005705.01.T01:CDS | 40.0% | |
| CATCTTCATGTACTCTGCTT+TGG | + | Chr1:95211891-95211910 | None:intergenic | 40.0% | |
| CATTGCAACGGTCATTTCAA+AGG | - | Chr1:95210561-95210580 | MsG0180005705.01.T01:intron | 40.0% | |
| CCAATCAGGCAAAAGATCAT+TGG | - | Chr1:95210783-95210802 | MsG0180005705.01.T01:intron | 40.0% | |
| CTATTGAGGAGATGTACTCA+AGG | - | Chr1:95212042-95212061 | MsG0180005705.01.T01:CDS | 40.0% | |
| CTCAAGGAAAGAAGATCAGA+AGG | - | Chr1:95212472-95212491 | MsG0180005705.01.T01:intron | 40.0% | |
| CTCAGCCTAACAATGAAAGA+GGG | - | Chr1:95213685-95213704 | MsG0180005705.01.T01:intron | 40.0% | |
| GAACAATTTCAGCAGAGGTT+TGG | + | Chr1:95210953-95210972 | None:intergenic | 40.0% | |
| GACTCAACAAGTTCATCTCT+GGG | + | Chr1:95212788-95212807 | None:intergenic | 40.0% | |
| GATCTGAAAGCTTCTGAACA+AGG | - | Chr1:95212911-95212930 | MsG0180005705.01.T01:five_prime_UTR | 40.0% | |
| GCCAAAGAACTCTAAGTCAA+AGG | - | Chr1:95213294-95213313 | MsG0180005705.01.T01:intron | 40.0% | |
| GGTGAGAAAAACACAAGAAG+GGG | + | Chr1:95211474-95211493 | None:intergenic | 40.0% | |
| GTCATCAAAAGCTCTCAAAG+TGG | - | Chr1:95212313-95212332 | MsG0180005705.01.T01:CDS | 40.0% | |
| GTGAGAAAAACACAAGAAGG+GGG | + | Chr1:95211473-95211492 | None:intergenic | 40.0% | |
| TATCATTCAGATGCACTCTG+TGG | - | Chr1:95214105-95214124 | MsG0180005705.01.T01:five_prime_UTR | 40.0% | |
| TCAATAGCTCTTCCATCCAA+AGG | - | Chr1:95212287-95212306 | MsG0180005705.01.T01:CDS | 40.0% | |
| TCAGATCTTTGACTGTTGCA+CGG | + | Chr1:95211540-95211559 | None:intergenic | 40.0% | |
| TCAGCATCTCCATTGAACTT+TGG | + | Chr1:95211665-95211684 | None:intergenic | 40.0% | |
| TCATAGGACAACAACCAATC+AGG | - | Chr1:95210769-95210788 | MsG0180005705.01.T01:intron | 40.0% | |
| TCCTGGAAGGTTAGTACTTA+AGG | + | Chr1:95213533-95213552 | None:intergenic | 40.0% | |
| TCTCTTTCCCTTGAACACAA+TGG | + | Chr1:95213913-95213932 | None:intergenic | 40.0% | |
| TCTTGCATTGCCAAATCTCT+AGG | + | Chr1:95210895-95210914 | None:intergenic | 40.0% | |
| TGACTCAACAAGTTCATCTC+TGG | + | Chr1:95212789-95212808 | None:intergenic | 40.0% | |
| TGAGAAAAACACAAGAAGGG+GGG | + | Chr1:95211472-95211491 | None:intergenic | 40.0% | |
| TGGTGAAATGACTTCTGATG+AGG | + | Chr1:95210438-95210457 | None:intergenic | 40.0% | |
| TGTTGTGAATGCATCAAGGA+AGG | - | Chr1:95213175-95213194 | MsG0180005705.01.T01:intron | 40.0% | |
| TTAGGTACCCATTGTCCTAT+GGG | + | Chr1:95213556-95213575 | None:intergenic | 40.0% | |
| TTCCTCCCTCTTTCATTGTT+AGG | + | Chr1:95213693-95213712 | None:intergenic | 40.0% | |
| TTGAAGTCTGTTTGAGAGCA+TGG | + | Chr1:95212399-95212418 | None:intergenic | 40.0% | |
| TTGTAGAGTTTCCTCAGTTC+TGG | + | Chr1:95211827-95211846 | None:intergenic | 40.0% | |
| TTTAGGTACCCATTGTCCTA+TGG | + | Chr1:95213557-95213576 | None:intergenic | 40.0% | |
| ! | CCAATGATCTTTTGCCTGAT+TGG | + | Chr1:95210786-95210805 | None:intergenic | 40.0% |
| ! | GATATTCTGGAAGATGGTGT+TGG | - | Chr1:95211749-95211768 | MsG0180005705.01.T01:CDS | 40.0% |
| ! | GATGATTTGGGTAGTGAATC+TGG | - | Chr1:95212641-95212660 | MsG0180005705.01.T01:CDS | 40.0% |
| ! | GCCTTTGACTTAGAGTTCTT+TGG | + | Chr1:95213298-95213317 | None:intergenic | 40.0% |
| ! | GTCTTGTTGTGAATGCATCA+AGG | - | Chr1:95213171-95213190 | MsG0180005705.01.T01:intron | 40.0% |
| ! | TCAATTGGTATCTAGAGCCT+TGG | - | Chr1:95211495-95211514 | MsG0180005705.01.T01:CDS | 40.0% |
| ! | TGAAATCCTTGGAAGTGCAA+GGG | - | Chr1:95211260-95211279 | MsG0180005705.01.T01:CDS | 40.0% |
| ! | TGTTTTCTTGTCTTGTAGCG+TGG | + | Chr1:95210682-95210701 | None:intergenic | 40.0% |
| ! | TTTGATGACTTGCCTTTGGA+TGG | + | Chr1:95212302-95212321 | None:intergenic | 40.0% |
| !! | ACCTGAAGCTTCTAGTTCTA+AGG | - | Chr1:95213255-95213274 | MsG0180005705.01.T01:intron | 40.0% |
| !! | AGCAAACATAGCTTTAGCAG+TGG | + | Chr1:95211924-95211943 | None:intergenic | 40.0% |
| !! | AGCTTTTGATGACTTGCCTT+TGG | + | Chr1:95212306-95212325 | None:intergenic | 40.0% |
| !! | AGGCTCTAGATACCAATTGA+AGG | + | Chr1:95211495-95211514 | None:intergenic | 40.0% |
| !!! | CTTTGGAACTTTTCCAACAC+TGG | + | Chr1:95211648-95211667 | None:intergenic | 40.0% |
| AACCAGACAGGCAAGATCAT+AGG | - | Chr1:95213730-95213749 | MsG0180005705.01.T01:intron | 45.0% | |
| AAGTTTGGAGGAAACCAGAC+AGG | - | Chr1:95213718-95213737 | MsG0180005705.01.T01:intron | 45.0% | |
| AATGGCAACCTGGGATGATT+TGG | - | Chr1:95212628-95212647 | MsG0180005705.01.T01:CDS | 45.0% | |
| ACAGGCAAGATCATAGGTAC+AGG | - | Chr1:95213736-95213755 | MsG0180005705.01.T01:intron | 45.0% | |
| ACCAAAAGTGACTGCCATTG+AGG | - | Chr1:95212163-95212182 | MsG0180005705.01.T01:CDS | 45.0% | |
| ACCAGAAGCTGAAGATCAAC+TGG | - | Chr1:95210454-95210473 | MsG0180005705.01.T01:CDS | 45.0% | |
| AGAAATGGATGTGGCACAGA+AGG | - | Chr1:95214008-95214027 | MsG0180005705.01.T01:five_prime_UTR | 45.0% | |
| AGAACCTATTCCTCAGAGTC+TGG | - | Chr1:95213369-95213388 | MsG0180005705.01.T01:intron | 45.0% | |
| AGACTTCAGAACCCCAGATT+TGG | + | Chr1:95213400-95213419 | None:intergenic | 45.0% | |
| AGATCATGGTACCTAGACAG+CGG | - | Chr1:95213625-95213644 | MsG0180005705.01.T01:intron | 45.0% | |
| AGCAGAGTTTAATGGCAACC+TGG | - | Chr1:95212618-95212637 | MsG0180005705.01.T01:CDS | 45.0% | |
| AGCCTAACAATGAAAGAGGG+AGG | - | Chr1:95213688-95213707 | MsG0180005705.01.T01:intron | 45.0% | |
| ATGCTGAAGAGTTCTCTTGG+TGG | - | Chr1:95211678-95211697 | MsG0180005705.01.T01:CDS | 45.0% | |
| ATGGCAACCTGGGATGATTT+GGG | - | Chr1:95212629-95212648 | MsG0180005705.01.T01:CDS | 45.0% | |
| CAGTGCCAAAGCAAAGATCA+TGG | - | Chr1:95213611-95213630 | MsG0180005705.01.T01:intron | 45.0% | |
| CATAAGGATGCAGTACTCAC+TGG | + | Chr1:95214231-95214250 | None:intergenic | 45.0% | |
| CATTGTTAGGCTGAGGAACA+TGG | + | Chr1:95213680-95213699 | None:intergenic | 45.0% | |
| CCTCAGCCTAACAATGAAAG+AGG | - | Chr1:95213684-95213703 | MsG0180005705.01.T01:intron | 45.0% | |
| CCTCTTTCATTGTTAGGCTG+AGG | + | Chr1:95213687-95213706 | None:intergenic | 45.0% | |
| CGCCTGCATATATGTTCCTT+TGG | - | Chr1:95210719-95210738 | MsG0180005705.01.T01:CDS | 45.0% | |
| CTAGTATCACCAGAACCAGT+AGG | + | Chr1:95211584-95211603 | None:intergenic | 45.0% | |
| GAAGATGCAAAGGTAGCTGT+TGG | - | Chr1:95212686-95212705 | MsG0180005705.01.T01:CDS | 45.0% | |
| GAAGCTGCATCATCAGAAGT+TGG | - | Chr1:95210350-95210369 | MsG0180005705.01.T01:CDS | 45.0% | |
| GAGATGCTGAAGAGTTCTCT+TGG | - | Chr1:95211675-95211694 | MsG0180005705.01.T01:CDS | 45.0% | |
| GAGGGAGGAAATGTGAAGTT+TGG | - | Chr1:95213703-95213722 | MsG0180005705.01.T01:intron | 45.0% | |
| GAGTCTGGTGAAACCAAATC+TGG | - | Chr1:95213384-95213403 | MsG0180005705.01.T01:intron | 45.0% | |
| GCAGAGTTTAATGGCAACCT+GGG | - | Chr1:95212619-95212638 | MsG0180005705.01.T01:CDS | 45.0% | |
| GCCTTAAGTACTAACCTTCC+AGG | - | Chr1:95213529-95213548 | MsG0180005705.01.T01:intron | 45.0% | |
| GCCTTAGAACTAGAAGCTTC+AGG | + | Chr1:95213259-95213278 | None:intergenic | 45.0% | |
| GCTTCTGAACAAGGACTTAG+GGG | - | Chr1:95212920-95212939 | MsG0180005705.01.T01:five_prime_UTR | 45.0% | |
| GGAAGCTGATGAAGATGCAA+AGG | - | Chr1:95212676-95212695 | MsG0180005705.01.T01:CDS | 45.0% | |
| GGAGGAAATGTGAAGTTTGG+AGG | - | Chr1:95213706-95213725 | MsG0180005705.01.T01:intron | 45.0% | |
| GGAGTGAAGACCTAGAGATT+TGG | - | Chr1:95210882-95210901 | MsG0180005705.01.T01:CDS | 45.0% | |
| GTCTGGTGAAACCAAATCTG+GGG | - | Chr1:95213386-95213405 | MsG0180005705.01.T01:intron | 45.0% | |
| GTGGACACAAAACAGAGTAG+TGG | + | Chr1:95210663-95210682 | None:intergenic | 45.0% | |
| TACCTATGATCTTGCCTGTC+TGG | + | Chr1:95213735-95213754 | None:intergenic | 45.0% | |
| TCCAGTTGATCTTCAGCTTC+TGG | + | Chr1:95210458-95210477 | None:intergenic | 45.0% | |
| TGAACCAGATGCTGCTGAAA+TGG | - | Chr1:95212373-95212392 | MsG0180005705.01.T01:CDS | 45.0% | |
| TGCTTCAACTGTAAGAAGCC+GGG | - | Chr1:95212497-95212516 | MsG0180005705.01.T01:intron | 45.0% | |
| TGTACCTTGTGCTGTGAGTT+GGG | + | Chr1:95213493-95213512 | None:intergenic | 45.0% | |
| TTCACTACCCAAATCATCCC+AGG | + | Chr1:95212639-95212658 | None:intergenic | 45.0% | |
| TTCTGAACTGGCTGATCAGA+AGG | - | Chr1:95213958-95213977 | MsG0180005705.01.T01:five_prime_UTR | 45.0% | |
| TTGTACCTTGTGCTGTGAGT+TGG | + | Chr1:95213494-95213513 | None:intergenic | 45.0% | |
| ! | AAACAGAGTAGTGGAGAACG+TGG | + | Chr1:95210654-95210673 | None:intergenic | 45.0% |
| ! | AAATCCTTGGAAGTGCAAGG+GGG | - | Chr1:95211262-95211281 | MsG0180005705.01.T01:CDS | 45.0% |
| ! | CAGTGAGTACTGCATCCTTA+TGG | - | Chr1:95214229-95214248 | MsG0180005705.01.T01:five_prime_UTR | 45.0% |
| ! | CATGTACTCTGCTTTGGGTA+TGG | + | Chr1:95211885-95211904 | None:intergenic | 45.0% |
| ! | CATTCAGCAATGAAGTGTCC+CGG | + | Chr1:95212518-95212537 | None:intergenic | 45.0% |
| ! | GAAATCCTTGGAAGTGCAAG+GGG | - | Chr1:95211261-95211280 | MsG0180005705.01.T01:CDS | 45.0% |
| ! | GAAGGCATGTGCTTGCAATT+TGG | - | Chr1:95210589-95210608 | MsG0180005705.01.T01:intron | 45.0% |
| ! | GTGAAATCCTTGGAAGTGCA+AGG | - | Chr1:95211259-95211278 | MsG0180005705.01.T01:CDS | 45.0% |
| ! | TAGCTTGTGTGCTTGAGCAA+AGG | - | Chr1:95211188-95211207 | MsG0180005705.01.T01:CDS | 45.0% |
| ! | TGATGCAGCTTCTGATGATG+TGG | + | Chr1:95210342-95210361 | None:intergenic | 45.0% |
| ! | TTCACCAGACTCTGAGGAAT+AGG | + | Chr1:95213376-95213395 | None:intergenic | 45.0% |
| ! | TTTGGTTTCACCAGACTCTG+AGG | + | Chr1:95213382-95213401 | None:intergenic | 45.0% |
| !! | TACTGGTTCCTTCCACAATC+CGG | + | Chr1:95211300-95211319 | None:intergenic | 45.0% |
| !! | TCCTCAATGGCAGTCACTTT+TGG | + | Chr1:95212167-95212186 | None:intergenic | 45.0% |
| !!! | AGTCACTTTTGGTCTCCATC+TGG | + | Chr1:95212156-95212175 | None:intergenic | 45.0% |
| AATGGATGTGGCACAGAAGG+TGG | - | Chr1:95214011-95214030 | MsG0180005705.01.T01:five_prime_UTR | 50.0% | |
| ACTAACCTTCCAGGACCCAT+AGG | - | Chr1:95213538-95213557 | MsG0180005705.01.T01:intron | 50.0% | |
| ACTGGACTACTTCCGGATTG+TGG | - | Chr1:95211285-95211304 | MsG0180005705.01.T01:CDS | 50.0% | |
| AGAAGGTGGGACATGCTAAC+TGG | - | Chr1:95214025-95214044 | MsG0180005705.01.T01:five_prime_UTR | 50.0% | |
| ATGCAGGCGAAACCGTATTC+TGG | + | Chr1:95210708-95210727 | None:intergenic | 50.0% | |
| ATGGATGTGGCACAGAAGGT+GGG | - | Chr1:95214012-95214031 | MsG0180005705.01.T01:five_prime_UTR | 50.0% | |
| ATGGCCATTTCAGCAGCATC+TGG | + | Chr1:95212380-95212399 | None:intergenic | 50.0% | |
| ATTGTCCTATGGGTCCTGGA+AGG | + | Chr1:95213546-95213565 | None:intergenic | 50.0% | |
| CAGCAGCTCCTTCTTCATCA+AGG | + | Chr1:95211784-95211803 | None:intergenic | 50.0% | |
| CATGTCTATCCTCCTCCTAC+TGG | - | Chr1:95211566-95211585 | MsG0180005705.01.T01:CDS | 50.0% | |
| CTCTTGCATTGTGCTTGAGC+AGG | - | Chr1:95211128-95211147 | MsG0180005705.01.T01:intron | 50.0% | |
| GACTACTTCCGGATTGTGGA+AGG | - | Chr1:95211289-95211308 | MsG0180005705.01.T01:CDS | 50.0% | |
| GCAACAGCAACTTCAGAAGC+TGG | - | Chr1:95212716-95212735 | MsG0180005705.01.T01:CDS | 50.0% | |
| GGTTGCTCAAGACACATGAC+AGG | - | Chr1:95213646-95213665 | MsG0180005705.01.T01:intron | 50.0% | |
| GTATCACCAGAACCAGTAGG+AGG | + | Chr1:95211581-95211600 | None:intergenic | 50.0% | |
| TCAGAAGCTTACCTGCCAGA+TGG | - | Chr1:95212138-95212157 | MsG0180005705.01.T01:CDS | 50.0% | |
| TCCAGGACCCATAGGACAAT+GGG | - | Chr1:95213546-95213565 | MsG0180005705.01.T01:intron | 50.0% | |
| TCTGTGGTGCATGTCAGAGA+GGG | - | Chr1:95214121-95214140 | MsG0180005705.01.T01:five_prime_UTR | 50.0% | |
| TGATGAAGAAGGAGCTGCTG+TGG | - | Chr1:95211784-95211803 | MsG0180005705.01.T01:CDS | 50.0% | |
| TGCAAAGGTAGCTGTTGGGT+TGG | - | Chr1:95212691-95212710 | MsG0180005705.01.T01:CDS | 50.0% | |
| TTCCAGGACCCATAGGACAA+TGG | - | Chr1:95213545-95213564 | MsG0180005705.01.T01:intron | 50.0% | |
| ! | ACAACGACTCTTTGGTGTGC+TGG | - | Chr1:95210823-95210842 | MsG0180005705.01.T01:CDS | 50.0% |
| ! | ACTTTTGGTCTCCATCTGGC+AGG | + | Chr1:95212152-95212171 | None:intergenic | 50.0% |
| ! | GCTTCTGATGATGTGGCTTC+TGG | + | Chr1:95210335-95210354 | None:intergenic | 50.0% |
| !! | TATCCTCCTCCTACTGGTTC+TGG | - | Chr1:95211572-95211591 | MsG0180005705.01.T01:CDS | 50.0% |
| !!! | GCTTCTGGAGTTACCCCTTT+TGG | + | Chr1:95212453-95212472 | None:intergenic | 50.0% |
| AAGGGGGACTGGACTACTTC+CGG | - | Chr1:95211278-95211297 | MsG0180005705.01.T01:CDS | 55.0% | |
| ACCCATTGTCCTATGGGTCC+TGG | + | Chr1:95213550-95213569 | None:intergenic | 55.0% | |
| AGGTGGGACATGCTAACTGG+AGG | - | Chr1:95214028-95214047 | MsG0180005705.01.T01:five_prime_UTR | 55.0% | |
| CTCTGTGGTGCATGTCAGAG+AGG | - | Chr1:95214120-95214139 | MsG0180005705.01.T01:five_prime_UTR | 55.0% | |
| GCAACCCAACTCACAGCACA+AGG | - | Chr1:95213486-95213505 | MsG0180005705.01.T01:intron | 55.0% | |
| GCAGCTTCTGCAGCTTCTGA+TGG | + | Chr1:95210386-95210405 | None:intergenic | 55.0% | |
| GGGGTAACTCCAGAAGCTCA+AGG | - | Chr1:95212456-95212475 | MsG0180005705.01.T01:CDS | 55.0% | |
| GTCTTGAGCAACCGCTGTCT+AGG | + | Chr1:95213639-95213658 | None:intergenic | 55.0% | |
| GTTTCCAACTCAGCCCCTTC+TGG | + | Chr1:95213220-95213239 | None:intergenic | 55.0% | |
| TCACCAGAACCAGTAGGAGG+AGG | + | Chr1:95211578-95211597 | None:intergenic | 55.0% | |
| TGTACCAGAAGGGGCTGAGT+TGG | - | Chr1:95213213-95213232 | MsG0180005705.01.T01:intron | 55.0% | |
| CAGTCCCCCTTGCACTTCCA+AGG | + | Chr1:95211269-95211288 | None:intergenic | 60.0% | |
| ! | CTTGGAAGTGCAAGGGGGAC+TGG | - | Chr1:95211267-95211286 | MsG0180005705.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 95210317 | 95214257 | 95210317 | ID=MsG0180005705.01;Name=MsG0180005705.01 |
| Chr1 | mRNA | 95210317 | 95214257 | 95210317 | ID=MsG0180005705.01.T01;Parent=MsG0180005705.01;Name=MsG0180005705.01.T01;_AED=0.34;_eAED=0.46;_QI=483|0|0|1|1|1|6|0|739 |
| Chr1 | exon | 95213939 | 95214257 | 95213939 | ID=MsG0180005705.01.T01:exon:10394;Parent=MsG0180005705.01.T01 |
| Chr1 | exon | 95212565 | 95213013 | 95212565 | ID=MsG0180005705.01.T01:exon:10393;Parent=MsG0180005705.01.T01 |
| Chr1 | exon | 95211184 | 95212482 | 95211184 | ID=MsG0180005705.01.T01:exon:10392;Parent=MsG0180005705.01.T01 |
| Chr1 | exon | 95210823 | 95211090 | 95210823 | ID=MsG0180005705.01.T01:exon:10391;Parent=MsG0180005705.01.T01 |
| Chr1 | exon | 95210633 | 95210769 | 95210633 | ID=MsG0180005705.01.T01:exon:10390;Parent=MsG0180005705.01.T01 |
| Chr1 | exon | 95210317 | 95210547 | 95210317 | ID=MsG0180005705.01.T01:exon:10389;Parent=MsG0180005705.01.T01 |
| Chr1 | five_prime_UTR | 95213939 | 95214257 | 95213939 | ID=MsG0180005705.01.T01:five_prime_utr;Parent=MsG0180005705.01.T01 |
| Chr1 | five_prime_UTR | 95212850 | 95213013 | 95212850 | ID=MsG0180005705.01.T01:five_prime_utr;Parent=MsG0180005705.01.T01 |
| Chr1 | CDS | 95212565 | 95212849 | 95212565 | ID=MsG0180005705.01.T01:cds;Parent=MsG0180005705.01.T01 |
| Chr1 | CDS | 95211184 | 95212482 | 95211184 | ID=MsG0180005705.01.T01:cds;Parent=MsG0180005705.01.T01 |
| Chr1 | CDS | 95210823 | 95211090 | 95210823 | ID=MsG0180005705.01.T01:cds;Parent=MsG0180005705.01.T01 |
| Chr1 | CDS | 95210633 | 95210769 | 95210633 | ID=MsG0180005705.01.T01:cds;Parent=MsG0180005705.01.T01 |
| Chr1 | CDS | 95210317 | 95210547 | 95210317 | ID=MsG0180005705.01.T01:cds;Parent=MsG0180005705.01.T01 |
| Gene Sequence |
| Protein sequence |
