AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010406.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010406.01.T01 MTR_2g083480 82.135 459 81 1 1 459 1 458 0.0 769
MsG0280010406.01.T01 MTR_2g083420 80.392 459 65 2 1 459 1 434 0.0 761
MsG0280010406.01.T01 MTR_2g083390 80.392 459 65 2 1 459 1 434 0.0 757
MsG0280010406.01.T01 MTR_2g083430 76.035 459 109 1 1 459 1 458 0.0 692
MsG0280010406.01.T01 MTR_2g083380 65.359 459 158 1 1 459 18 475 0.0 602
MsG0280010406.01.T01 MTR_2g083490 64.488 459 162 1 1 459 1 458 0.0 601
MsG0280010406.01.T01 MTR_4g079250 59.219 461 183 4 1 459 1 458 0.0 564
MsG0280010406.01.T01 MTR_4g079270 59.002 461 184 4 1 459 1 458 0.0 560
MsG0280010406.01.T01 MTR_2g083360 62.996 454 62 5 6 459 27 374 0.0 533
MsG0280010406.01.T01 MTR_2g014900 57.522 452 190 2 8 459 7 456 0.0 530
MsG0280010406.01.T01 MTR_1g090270 41.215 461 252 11 7 458 14 464 6.63e-112 338
MsG0280010406.01.T01 MTR_2g086283 57.312 253 56 2 206 458 135 335 1.31e-91 281
MsG0280010406.01.T01 MTR_2g086283 62.044 137 51 1 11 147 1 136 3.63e-50 174
MsG0280010406.01.T01 MTR_4g059370 40.836 311 170 5 154 458 89 391 1.87e-74 239
MsG0280010406.01.T01 MTR_8g068360 32.700 474 291 14 2 459 6 467 1.07e-70 231
MsG0280010406.01.T01 MTR_8g068330 31.992 472 300 13 1 459 1 464 3.74e-68 225
MsG0280010406.01.T01 MTR_8g068340 31.250 464 304 10 2 455 6 464 4.33e-67 222
MsG0280010406.01.T01 MTR_7g067330 31.974 466 258 15 2 453 3 423 1.76e-66 219
MsG0280010406.01.T01 MTR_4g123553 32.112 464 282 14 6 455 13 457 1.70e-63 213
MsG0280010406.01.T01 MTR_7g067120 31.263 467 260 17 2 453 3 423 2.35e-61 206
MsG0280010406.01.T01 MTR_2g008225 30.638 470 296 13 2 456 9 463 5.39e-61 206
MsG0280010406.01.T01 MTR_2g008226 32.265 468 290 13 6 455 8 466 1.27e-60 205
MsG0280010406.01.T01 MTR_2g008220 30.538 465 303 10 2 456 8 462 7.72e-60 203
MsG0280010406.01.T01 MTR_6g042310 31.236 461 288 13 7 455 17 460 3.26e-59 201
MsG0280010406.01.T01 MTR_6g036650 29.684 475 296 13 1 455 11 467 9.49e-59 200
MsG0280010406.01.T01 MTR_2g014930 40.690 290 91 6 17 306 9 217 2.87e-57 189
MsG0280010406.01.T01 MTR_2g046620 30.652 460 294 12 6 455 14 458 6.44e-56 192
MsG0280010406.01.T01 MTR_4g079280 40.175 229 91 3 11 239 1 183 4.64e-51 171
MsG0280010406.01.T01 MTR_2g083440 75.490 102 25 0 358 459 11 112 6.25e-51 168
MsG0280010406.01.T01 MTR_4g077960 29.773 440 278 14 17 443 1 422 8.51e-51 178
MsG0280010406.01.T01 MTR_3g435310 28.731 449 265 13 6 451 16 412 5.77e-48 170
MsG0280010406.01.T01 MTR_1g090280 42.788 208 107 5 262 458 108 314 2.72e-45 160
MsG0280010406.01.T01 MTR_8g007650 30.000 440 279 11 7 428 6 434 3.19e-45 164
MsG0280010406.01.T01 MTR_8g007565 29.773 440 280 11 7 428 6 434 3.26e-45 164
MsG0280010406.01.T01 MTR_5g066410 28.702 439 263 10 11 428 1 410 8.67e-42 154
MsG0280010406.01.T01 MTR_8g066610 27.345 501 300 19 1 458 1 480 8.10e-34 133
MsG0280010406.01.T01 MTR_4g031800 27.475 495 289 18 6 459 7 472 1.97e-32 129
MsG0280010406.01.T01 MTR_5g087620 26.360 478 298 17 8 444 10 474 2.06e-30 123
MsG0280010406.01.T01 MTR_8g071070 26.250 480 316 16 5 458 4 471 2.43e-30 123
MsG0280010406.01.T01 MTR_6g023665 27.477 444 281 15 9 428 14 440 1.38e-29 120
MsG0280010406.01.T01 MTR_8g009050 27.234 470 269 16 7 435 5 442 4.97e-29 119
MsG0280010406.01.T01 MTR_4g485590 28.780 410 233 14 8 395 9 381 5.02e-29 118
MsG0280010406.01.T01 MTR_2g098430 24.255 470 298 17 9 441 7 455 5.13e-29 119
MsG0280010406.01.T01 MTR_8g009055 26.915 457 287 16 7 435 5 442 1.24e-28 118
MsG0280010406.01.T01 MTR_6g488280 27.149 442 285 13 9 428 7 433 3.88e-28 116
MsG0280010406.01.T01 MTR_0428s0010 27.149 442 285 13 9 428 7 433 3.88e-28 116
MsG0280010406.01.T01 MTR_8g465670 26.050 476 266 18 9 435 8 446 5.49e-28 116
MsG0280010406.01.T01 MTR_1g062380 26.496 468 291 19 5 433 13 466 5.87e-28 116
MsG0280010406.01.T01 MTR_0009s0240 26.098 410 276 13 5 398 4 402 1.15e-27 115
MsG0280010406.01.T01 MTR_8g027885 27.521 476 293 19 6 453 16 467 4.23e-27 114
MsG0280010406.01.T01 MTR_8g008990 26.115 471 275 16 7 435 5 444 1.98e-26 111
MsG0280010406.01.T01 MTR_4g485620 25.641 468 308 14 20 458 1 457 2.30e-26 111
MsG0280010406.01.T01 MTR_8g027870 26.230 488 284 19 6 453 16 467 3.10e-26 111
MsG0280010406.01.T01 MTR_7g117170 37.158 183 99 5 258 428 266 444 3.59e-26 111
MsG0280010406.01.T01 MTR_7g070740 24.520 469 293 14 7 434 10 458 4.82e-26 110
MsG0280010406.01.T01 MTR_7g070660 23.894 452 290 15 7 422 10 443 7.41e-26 110
MsG0280010406.01.T01 MTR_5g045970 26.566 463 296 14 5 433 13 465 7.45e-26 110
MsG0280010406.01.T01 MTR_8g006710 25.393 445 290 15 9 428 7 434 1.78e-25 108
MsG0280010406.01.T01 MTR_8g006220 24.895 474 282 16 9 435 7 453 4.22e-25 108
MsG0280010406.01.T01 MTR_0078s0060 33.673 196 112 5 254 437 253 442 6.20e-25 107
MsG0280010406.01.T01 MTR_6g005600 35.233 193 108 4 256 435 255 443 7.29e-25 107
MsG0280010406.01.T01 MTR_8g009073 26.638 473 266 21 7 435 5 440 1.25e-24 106
MsG0280010406.01.T01 MTR_6g038220 24.528 477 301 16 8 459 11 453 1.49e-24 106
MsG0280010406.01.T01 MTR_0184s0030 32.432 222 124 7 234 436 230 444 1.85e-24 105
MsG0280010406.01.T01 MTR_3g009510 31.336 217 130 5 237 437 241 454 2.89e-24 105
MsG0280010406.01.T01 MTR_8g006730 25.056 443 297 15 8 428 6 435 3.82e-24 105
MsG0280010406.01.T01 MTR_4g485630 25.800 469 282 19 7 434 8 451 4.19e-24 105
MsG0280010406.01.T01 MTR_4g117980 25.647 464 282 19 6 428 9 450 4.20e-24 105
MsG0280010406.01.T01 MTR_0184s0040 32.653 196 114 5 254 437 269 458 4.43e-24 105
MsG0280010406.01.T01 MTR_0078s0190 32.653 196 114 5 254 437 269 458 4.43e-24 105
MsG0280010406.01.T01 MTR_6g038230 25.417 480 294 19 8 459 11 454 4.97e-24 104
MsG0280010406.01.T01 MTR_4g024020 24.784 464 292 18 7 428 8 456 5.92e-24 104
MsG0280010406.01.T01 MTR_0078s0010 34.896 192 111 5 254 435 254 441 9.77e-24 103
MsG0280010406.01.T01 MTR_6g033625 24.783 460 289 15 9 435 5 440 9.97e-24 103
MsG0280010406.01.T01 MTR_7g070780 23.871 465 305 13 5 434 8 458 1.20e-23 103
MsG0280010406.01.T01 MTR_7g117405 26.552 467 280 19 8 434 12 455 1.32e-23 103
MsG0280010406.01.T01 MTR_6g038200 25.105 474 295 18 8 455 11 450 1.33e-23 103
MsG0280010406.01.T01 MTR_7g013180 25.581 430 282 13 8 420 5 413 1.53e-23 103
MsG0280010406.01.T01 MTR_6g038240 34.043 188 110 7 249 436 258 431 1.82e-23 102
MsG0280010406.01.T01 MTR_8g009063 25.910 467 279 17 7 435 12 449 2.42e-23 102
MsG0280010406.01.T01 MTR_6g033615 25.442 452 282 16 9 435 5 426 2.60e-23 102
MsG0280010406.01.T01 MTR_8g006270 29.150 247 154 6 207 436 198 440 2.70e-23 102
MsG0280010406.01.T01 MTR_7g070810 24.661 442 297 14 7 422 8 439 3.18e-23 102
MsG0280010406.01.T01 MTR_8g009073 33.023 215 126 7 235 435 101 311 5.20e-23 100
MsG0280010406.01.T01 MTR_5g035560 23.750 480 301 17 7 459 10 451 6.47e-23 101
MsG0280010406.01.T01 MTR_7g070610 23.467 473 294 16 7 434 12 461 7.25e-23 101
MsG0280010406.01.T01 MTR_4g128720 24.890 454 292 16 7 441 14 437 7.45e-23 101
MsG0280010406.01.T01 MTR_8g012635 31.193 218 129 5 236 436 235 448 8.88e-23 100
MsG0280010406.01.T01 MTR_6g033725 30.802 237 142 7 217 435 205 437 1.54e-22 100
MsG0280010406.01.T01 MTR_3g069690 32.787 183 114 5 254 435 251 425 1.90e-22 100
MsG0280010406.01.T01 MTR_7g013220 24.289 457 302 14 8 445 5 436 2.22e-22 99.8
MsG0280010406.01.T01 MTR_8g009067 34.043 188 110 5 258 435 139 322 2.26e-22 98.6
MsG0280010406.01.T01 MTR_1g019520 33.333 189 111 4 258 435 4 188 2.95e-22 95.1
MsG0280010406.01.T01 MTR_3g009490 35.928 167 91 4 284 437 3 166 2.99e-22 94.4
MsG0280010406.01.T01 MTR_5g035580 31.401 207 132 5 253 459 257 453 3.38e-22 99.4
MsG0280010406.01.T01 MTR_8g009067 34.043 188 110 5 258 435 257 440 3.54e-22 99.4
MsG0280010406.01.T01 MTR_8g012650 30.734 218 130 5 236 436 235 448 3.77e-22 99.4
MsG0280010406.01.T01 MTR_7g047030 34.409 186 108 5 260 435 260 441 3.93e-22 99.0
MsG0280010406.01.T01 MTR_7g047270 34.409 186 108 5 260 435 260 441 3.93e-22 99.0
MsG0280010406.01.T01 MTR_8g012730 31.081 222 134 5 229 436 69 285 4.75e-22 96.7
MsG0280010406.01.T01 MTR_7g102460 25.000 476 273 21 7 428 8 453 5.11e-22 99.0
MsG0280010406.01.T01 MTR_7g102490 25.270 463 290 17 7 428 8 455 5.60e-22 99.0
MsG0280010406.01.T01 MTR_8g083290 23.899 477 277 17 6 435 2 439 5.97e-22 98.6
MsG0280010406.01.T01 MTR_4g117950 25.435 460 286 17 6 434 4 437 9.31e-22 98.2
MsG0280010406.01.T01 MTR_7g055710 23.110 463 307 13 7 434 10 458 9.44e-22 98.2
MsG0280010406.01.T01 MTR_8g077590 28.470 281 182 5 166 433 168 442 1.29e-21 97.4
MsG0280010406.01.T01 MTR_8g466240 25.400 437 250 18 1 399 1 399 1.36e-21 97.4
MsG0280010406.01.T01 MTR_7g013200 30.769 208 128 8 242 445 230 425 2.14e-21 96.7
MsG0280010406.01.T01 MTR_8g074550 21.748 492 300 16 1 435 1 464 2.21e-21 97.1
MsG0280010406.01.T01 MTR_1g019510 25.926 459 286 21 7 435 5 439 2.40e-21 96.7
MsG0280010406.01.T01 MTR_5g098930 23.185 496 306 16 7 457 4 469 2.46e-21 96.7
MsG0280010406.01.T01 MTR_2g034990 23.974 463 300 16 1 429 4 448 3.63e-21 96.3
MsG0280010406.01.T01 MTR_7g070940 23.060 451 313 14 7 434 8 447 4.74e-21 95.9
MsG0280010406.01.T01 MTR_2g046820 32.174 230 142 6 237 455 236 462 5.51e-21 95.5
MsG0280010406.01.T01 MTR_7g102560 24.313 473 310 15 1 437 1 461 8.68e-21 95.1
MsG0280010406.01.T01 MTR_7g071040 22.462 463 315 13 5 434 14 465 1.68e-20 94.4
MsG0280010406.01.T01 MTR_8g006260 31.401 207 126 7 242 437 246 447 1.74e-20 94.4
MsG0280010406.01.T01 MTR_7g070910 22.581 465 312 14 5 434 8 459 2.12e-20 94.0
MsG0280010406.01.T01 MTR_3g069710 31.455 213 130 8 252 458 252 454 3.46e-20 93.2
MsG0280010406.01.T01 MTR_4g082810 26.667 420 263 15 7 398 6 408 4.43e-20 92.4
MsG0280010406.01.T01 MTR_7g046490 32.308 195 116 5 254 436 250 440 4.74e-20 92.8
MsG0280010406.01.T01 MTR_8g012630 31.606 193 114 5 258 436 204 392 4.97e-20 92.4
MsG0280010406.01.T01 MTR_7g102450 36.628 172 97 5 269 429 271 441 6.63e-20 92.4
MsG0280010406.01.T01 MTR_2g059240 25.118 422 274 12 2 398 8 412 8.15e-20 92.0
MsG0280010406.01.T01 MTR_1g107350 33.333 180 114 5 258 435 269 444 9.25e-20 92.0
MsG0280010406.01.T01 MTR_2g046750 32.609 230 141 6 237 455 239 465 1.06e-19 91.7
MsG0280010406.01.T01 MTR_7g102550 24.124 485 315 18 8 453 9 479 1.51e-19 91.3
MsG0280010406.01.T01 MTR_7g070800 23.739 476 289 18 5 434 3 450 1.51e-19 91.3
MsG0280010406.01.T01 MTR_1g029540 23.758 463 303 18 13 451 19 455 1.69e-19 91.3
MsG0280010406.01.T01 MTR_8g083280 25.572 481 299 16 8 457 7 459 1.76e-19 91.3
MsG0280010406.01.T01 MTR_0536s0010 25.330 454 281 18 6 428 19 445 2.03e-19 90.9
MsG0280010406.01.T01 MTR_6g033675 27.731 238 145 7 220 435 208 440 2.33e-19 90.9
MsG0280010406.01.T01 MTR_2g040530 29.675 246 151 6 230 455 221 464 2.69e-19 90.5
MsG0280010406.01.T01 MTR_8g064880 25.708 459 258 20 5 413 6 431 3.48e-19 90.5
MsG0280010406.01.T01 MTR_8g012745 27.365 296 184 10 162 436 160 445 3.53e-19 90.1
MsG0280010406.01.T01 MTR_4g485640 25.342 438 279 17 18 428 219 635 4.17e-19 90.5
MsG0280010406.01.T01 MTR_5g019580 29.536 237 143 7 237 455 265 495 5.36e-19 89.7
MsG0280010406.01.T01 MTR_3g084540 28.767 219 128 6 242 437 238 451 5.88e-19 89.7
MsG0280010406.01.T01 MTR_6g038300 31.217 189 117 6 249 437 258 433 6.05e-19 89.4
MsG0280010406.01.T01 MTR_5g019580 29.536 237 143 7 237 455 241 471 6.76e-19 89.4
MsG0280010406.01.T01 MTR_3g049970 25.793 473 280 22 3 435 4 445 7.90e-19 89.4
MsG0280010406.01.T01 MTR_6g035185 22.912 467 302 15 1 428 4 451 8.18e-19 89.4
MsG0280010406.01.T01 MTR_8g008970 31.915 188 114 5 258 435 257 440 8.70e-19 89.7
MsG0280010406.01.T01 MTR_8g008970 31.285 179 112 5 258 435 596 764 8.71e-17 83.6
MsG0280010406.01.T01 MTR_8g044140 24.740 384 246 10 64 417 37 407 9.05e-19 89.0
MsG0280010406.01.T01 MTR_5g045960 25.891 421 264 17 7 395 8 412 1.23e-18 88.6
MsG0280010406.01.T01 MTR_5g067170 31.746 189 113 5 254 428 262 448 1.29e-18 88.6
MsG0280010406.01.T01 MTR_8g088560 30.263 228 137 8 237 450 229 448 1.35e-18 88.2
MsG0280010406.01.T01 MTR_4g117960 24.411 467 291 16 1 428 6 449 1.43e-18 88.6
MsG0280010406.01.T01 MTR_6g033660 31.522 184 120 4 254 435 260 439 1.54e-18 88.2
MsG0280010406.01.T01 MTR_4g108250 23.504 468 301 16 7 433 10 461 1.62e-18 88.2
MsG0280010406.01.T01 MTR_3g079480 23.881 469 277 19 8 428 21 457 1.77e-18 88.2
MsG0280010406.01.T01 MTR_7g013240 29.412 204 128 7 242 441 230 421 1.91e-18 87.8
MsG0280010406.01.T01 MTR_7g102520 33.862 189 113 5 255 433 276 462 2.02e-18 88.2
MsG0280010406.01.T01 MTR_4g128690 29.412 238 152 7 200 435 205 428 2.03e-18 87.8
MsG0280010406.01.T01 MTR_7g070930 22.479 476 313 15 1 434 1 462 2.28e-18 87.8
MsG0280010406.01.T01 MTR_1g107360 28.947 228 146 6 233 455 245 461 2.53e-18 87.4
MsG0280010406.01.T01 MTR_1g107315 35.625 160 95 5 258 413 269 424 4.94e-18 86.7
MsG0280010406.01.T01 MTR_8g090095 23.690 477 295 17 13 451 30 475 5.57e-18 86.7
MsG0280010406.01.T01 MTR_2g035040 29.897 194 117 5 258 437 173 361 5.97e-18 85.9
MsG0280010406.01.T01 MTR_3g084530 29.224 219 126 7 242 437 238 450 6.15e-18 86.3
MsG0280010406.01.T01 MTR_5g098960 31.330 233 134 10 234 455 229 446 6.71e-18 86.3
MsG0280010406.01.T01 MTR_7g011470 23.956 455 296 13 8 435 10 441 6.74e-18 86.3
MsG0280010406.01.T01 MTR_6g013900 32.768 177 105 6 254 428 283 447 7.29e-18 86.3
MsG0280010406.01.T01 MTR_5g090610 26.354 277 175 7 187 439 173 444 9.51e-18 85.9
MsG0280010406.01.T01 MTR_0891s0010 29.825 171 111 4 258 428 97 258 1.14e-17 83.6
MsG0280010406.01.T01 MTR_6g014170 29.592 196 124 6 254 447 266 449 1.29e-17 85.5
MsG0280010406.01.T01 MTR_4g095008 30.357 168 110 5 254 417 260 424 1.46e-17 85.5
MsG0280010406.01.T01 MTR_3g479610 30.409 171 110 4 258 428 120 281 1.51e-17 83.6
MsG0280010406.01.T01 MTR_5g027210 25.092 271 166 6 213 451 212 477 1.69e-17 85.1
MsG0280010406.01.T01 MTR_4g094920 29.101 189 122 6 254 433 275 460 1.75e-17 85.1
MsG0280010406.01.T01 MTR_6g013920 30.726 179 108 6 254 429 283 448 1.98e-17 85.1
MsG0280010406.01.T01 MTR_8g032950 23.246 456 301 16 6 428 10 449 2.02e-17 85.1
MsG0280010406.01.T01 MTR_7g013260 30.978 184 116 6 242 421 231 407 2.29e-17 84.3
MsG0280010406.01.T01 MTR_2g008210 30.682 176 113 5 254 428 278 445 2.38e-17 84.7
MsG0280010406.01.T01 MTR_5g090700 29.911 224 134 7 237 439 239 460 2.79e-17 84.3
MsG0280010406.01.T01 MTR_3g479520 22.024 504 327 20 1 459 1 483 3.15e-17 84.3
MsG0280010406.01.T01 MTR_3g084520 28.796 191 123 6 254 437 266 450 3.38e-17 84.3
MsG0280010406.01.T01 MTR_4g008630 26.909 275 171 9 200 451 191 458 3.87e-17 84.0
MsG0280010406.01.T01 MTR_6g035265 28.571 189 118 5 255 428 256 442 4.03e-17 84.0
MsG0280010406.01.T01 MTR_7g080950 31.217 189 117 7 254 442 253 428 4.07e-17 84.0
MsG0280010406.01.T01 MTR_5g058320 25.758 462 271 22 4 428 7 433 5.22e-17 83.6
MsG0280010406.01.T01 MTR_7g080940 29.412 187 121 5 255 441 259 434 6.35e-17 83.2
MsG0280010406.01.T01 MTR_7g011470 23.348 454 296 11 8 435 10 437 6.53e-17 83.2
MsG0280010406.01.T01 MTR_6g014220 29.213 178 116 5 258 435 286 453 8.31e-17 83.2
MsG0280010406.01.T01 MTR_5g090620 27.197 239 143 7 230 439 223 459 1.08e-16 82.8
MsG0280010406.01.T01 MTR_7g470610 34.028 144 91 3 254 395 128 269 1.09e-16 80.9
MsG0280010406.01.T01 MTR_7g070583 34.028 144 91 3 254 395 128 269 1.09e-16 80.9
MsG0280010406.01.T01 MTR_6g013990 27.473 182 122 5 254 435 282 453 1.15e-16 82.4
MsG0280010406.01.T01 MTR_7g080935 28.877 187 122 5 255 441 259 434 1.21e-16 82.4
MsG0280010406.01.T01 MTR_6g014020 29.348 184 116 6 254 435 284 455 1.22e-16 82.4
MsG0280010406.01.T01 MTR_4g082820 31.731 208 122 4 237 424 234 441 1.22e-16 82.4
MsG0280010406.01.T01 MTR_0288s0020 28.634 227 140 8 211 435 230 436 1.23e-16 82.4
MsG0280010406.01.T01 MTR_6g014190 29.891 184 115 6 254 435 91 262 1.34e-16 80.5
MsG0280010406.01.T01 MTR_7g070870 22.549 408 287 12 4 395 15 409 1.66e-16 82.0
MsG0280010406.01.T01 MTR_1g107375 30.899 178 111 5 258 435 264 429 1.84e-16 81.6
MsG0280010406.01.T01 MTR_5g029800 31.461 178 107 4 254 417 260 436 1.91e-16 82.0
MsG0280010406.01.T01 MTR_6g014250 28.646 192 123 6 258 447 286 465 1.98e-16 82.0
MsG0280010406.01.T01 MTR_5g016480 26.540 211 145 6 252 457 267 472 2.02e-16 81.6
MsG0280010406.01.T01 MTR_7g071050 28.169 213 134 6 254 456 227 430 2.13e-16 81.6
MsG0280010406.01.T01 MTR_5g040030 26.459 257 156 8 216 448 224 471 2.15e-16 81.6
MsG0280010406.01.T01 MTR_6g014200 29.891 184 115 6 254 435 281 452 3.19e-16 81.3
MsG0280010406.01.T01 MTR_8g064870 30.851 188 120 6 254 435 266 449 3.55e-16 81.3
MsG0280010406.01.T01 MTR_7g070860 22.388 469 286 17 7 434 6 437 4.89e-16 80.5
MsG0280010406.01.T01 MTR_2g035020 29.897 194 117 5 258 437 268 456 5.89e-16 80.5
MsG0280010406.01.T01 MTR_7g012120 30.526 190 116 5 254 428 266 454 7.21e-16 80.1
MsG0280010406.01.T01 MTR_1g032490 33.750 160 98 5 258 413 271 426 7.88e-16 80.1
MsG0280010406.01.T01 MTR_8g007585 30.000 180 112 6 258 435 200 367 8.20e-16 79.3
MsG0280010406.01.T01 MTR_6g011340 25.368 272 171 11 182 435 198 455 9.69e-16 79.7
MsG0280010406.01.T01 MTR_6g014050 29.670 182 114 6 256 435 287 456 9.90e-16 79.7
MsG0280010406.01.T01 MTR_8g059425 28.889 180 114 6 258 435 286 453 1.11e-15 79.7
MsG0280010406.01.T01 MTR_8g056740 25.862 232 158 5 211 432 111 338 1.31e-15 79.0
MsG0280010406.01.T01 MTR_3g479490 27.811 169 113 4 260 428 283 442 1.60e-15 79.0
MsG0280010406.01.T01 MTR_5g072820 22.748 444 298 15 8 435 10 424 2.04e-15 78.6
MsG0280010406.01.T01 MTR_4g117890 28.272 191 119 6 258 433 260 447 3.52e-15 78.2
MsG0280010406.01.T01 MTR_6g014270 28.804 184 117 6 254 435 283 454 4.29e-15 77.8
MsG0280010406.01.T01 MTR_5g039900 22.152 474 295 17 7 435 12 456 5.57e-15 77.4
MsG0280010406.01.T01 MTR_3g008010 28.333 180 115 6 258 435 286 453 6.36e-15 77.0
MsG0280010406.01.T01 MTR_6g014240 28.261 184 118 6 254 435 251 422 8.43e-15 76.6
MsG0280010406.01.T01 MTR_6g013450 28.261 184 118 6 254 435 285 456 9.34e-15 76.6
MsG0280010406.01.T01 MTR_4g118000 24.146 439 275 17 6 419 10 415 1.17e-14 76.3
MsG0280010406.01.T01 MTR_5g072840 22.098 448 296 15 8 435 10 424 1.28e-14 76.3
MsG0280010406.01.T01 MTR_7g039550 26.984 252 149 9 221 448 5 245 1.33e-14 74.3
MsG0280010406.01.T01 MTR_1g107365 30.270 185 105 6 242 413 274 447 1.60e-14 75.9
MsG0280010406.01.T01 MTR_6g014310 26.250 240 149 9 211 435 230 456 1.71e-14 75.9
MsG0280010406.01.T01 MTR_6g014150 28.804 184 117 6 254 435 281 452 1.93e-14 75.9
MsG0280010406.01.T01 MTR_6g014040 28.261 184 118 6 254 435 285 456 2.73e-14 75.1
MsG0280010406.01.T01 MTR_0536s0020 28.415 183 115 4 258 425 265 446 4.04e-14 74.7
MsG0280010406.01.T01 MTR_5g004940 34.454 119 76 2 258 375 197 314 7.00e-14 73.6
MsG0280010406.01.T01 MTR_1g040310 27.273 220 133 6 221 417 227 442 7.52e-14 73.9
MsG0280010406.01.T01 MTR_1g107285 30.864 162 101 4 254 413 267 419 9.40e-14 73.6
MsG0280010406.01.T01 MTR_5g072830 21.847 444 302 15 8 435 10 424 1.19e-13 73.2
MsG0280010406.01.T01 MTR_5g075440 25.957 235 155 5 216 441 213 437 1.23e-13 73.2
MsG0280010406.01.T01 MTR_6g014290 27.528 178 115 6 260 435 288 453 2.15e-13 72.4
MsG0280010406.01.T01 MTR_6g014187 27.717 184 119 6 254 435 284 455 2.48e-13 72.4
MsG0280010406.01.T01 MTR_4g064987 24.946 461 276 23 18 447 18 439 3.37e-13 71.6
MsG0280010406.01.T01 MTR_5g016660 28.415 183 112 6 254 423 272 448 4.10e-13 71.6
MsG0280010406.01.T01 MTR_4g064987 24.726 457 276 23 18 447 18 433 8.06e-13 70.5
MsG0280010406.01.T01 MTR_3g031450 26.230 183 116 4 250 428 253 420 1.20e-12 70.1
MsG0280010406.01.T01 MTR_7g080900 29.213 178 106 6 258 430 264 426 1.35e-12 69.7
MsG0280010406.01.T01 MTR_8g009840 31.250 160 94 3 275 420 333 490 1.44e-12 70.1
MsG0280010406.01.T01 MTR_6g013960 25.543 184 123 6 254 435 284 455 1.84e-12 69.7
MsG0280010406.01.T01 MTR_4g094220 26.705 176 120 4 260 435 288 454 2.68e-12 68.9
MsG0280010406.01.T01 MTR_5g031830 26.744 172 115 5 253 423 276 437 3.93e-12 68.6
MsG0280010406.01.T01 MTR_6g014300 26.282 156 105 5 280 435 296 441 4.09e-12 68.6
MsG0280010406.01.T01 MTR_5g090600 23.396 265 171 7 217 457 199 455 4.51e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010406.01.T01 AT4G27570 42.670 457 241 6 8 459 7 447 4.00e-135 397
MsG0280010406.01.T01 AT5G54010 43.640 456 245 6 5 459 3 447 5.91e-135 396
MsG0280010406.01.T01 AT5G53990 43.736 455 236 7 7 459 5 441 3.83e-133 392
MsG0280010406.01.T01 AT5G54060 43.601 461 250 8 5 459 10 466 4.04e-133 392
MsG0280010406.01.T01 AT4G27560 42.451 457 242 6 8 459 7 447 1.06e-132 391
MsG0280010406.01.T01 AT1G64920 42.048 459 242 8 7 459 5 445 3.25e-129 382
MsG0280010406.01.T01 AT4G09500 42.070 454 245 6 7 459 5 441 5.91e-129 381
MsG0280010406.01.T01 AT2G22930 43.137 459 233 7 7 459 5 441 8.00e-128 378
MsG0280010406.01.T01 AT1G64910 41.703 458 241 6 7 459 5 441 1.17e-126 375
MsG0280010406.01.T01 AT3G29630 40.749 454 250 5 5 455 3 440 3.69e-123 366
MsG0280010406.01.T01 AT3G29630 40.355 451 230 6 5 455 3 414 2.16e-116 348
MsG0280010406.01.T01 AT4G09500 40.177 453 230 7 7 459 5 416 2.74e-115 345
MsG0280010406.01.T01 AT1G50580 40.088 454 251 7 5 455 3 438 1.07e-113 342
MsG0280010406.01.T01 AT2G22590 33.547 468 277 16 7 455 14 466 3.07e-69 228
MsG0280010406.01.T01 AT5G49690 33.030 439 274 10 7 438 9 434 5.15e-68 224
MsG0280010406.01.T01 AT5G65550 31.277 470 297 16 1 455 1 459 1.15e-62 211
MsG0280010406.01.T01 AT2G22930 37.220 223 115 4 7 224 5 207 7.65e-44 155
MsG0280010406.01.T01 AT2G22930 37.143 105 61 3 358 459 187 289 3.81e-12 67.4
MsG0280010406.01.T01 AT1G73880 26.005 423 271 13 2 400 8 412 2.50e-33 131
MsG0280010406.01.T01 AT5G03490 26.058 449 287 13 6 436 17 438 4.77e-33 130
MsG0280010406.01.T01 AT5G12890 26.866 469 293 18 4 438 6 458 7.03e-33 130
MsG0280010406.01.T01 AT2G16890 27.623 467 291 23 8 446 9 456 1.96e-31 126
MsG0280010406.01.T01 AT1G51210 26.244 442 282 12 8 434 20 432 1.03e-29 120
MsG0280010406.01.T01 AT2G36800 27.451 459 287 17 5 428 9 456 1.98e-29 120
MsG0280010406.01.T01 AT2G15490 25.551 454 298 14 7 428 6 451 3.74e-29 119
MsG0280010406.01.T01 AT4G34131 26.061 495 306 18 2 455 4 479 3.81e-29 119
MsG0280010406.01.T01 AT2G15490 25.499 451 299 13 7 428 6 448 4.32e-29 119
MsG0280010406.01.T01 AT2G36750 29.158 463 270 20 6 428 8 452 8.04e-29 119
MsG0280010406.01.T01 AT4G36770 26.124 467 279 16 7 436 3 440 8.33e-29 118
MsG0280010406.01.T01 AT4G34138 26.380 489 304 16 5 455 8 478 8.94e-29 119
MsG0280010406.01.T01 AT2G18570 25.902 471 284 19 1 435 1 442 1.21e-28 118
MsG0280010406.01.T01 AT2G15480 25.714 455 291 14 7 427 9 450 1.86e-28 117
MsG0280010406.01.T01 AT2G16890 27.146 431 272 21 8 413 9 422 2.27e-28 116
MsG0280010406.01.T01 AT1G05675 26.889 450 280 18 8 435 6 428 2.33e-28 117
MsG0280010406.01.T01 AT2G15480 26.258 457 286 15 7 429 9 448 2.34e-28 117
MsG0280010406.01.T01 AT1G10400 26.096 479 300 21 7 452 6 463 5.98e-28 116
MsG0280010406.01.T01 AT2G36770 28.228 457 283 20 6 428 12 457 1.68e-27 115
MsG0280010406.01.T01 AT2G31750 24.783 460 295 15 1 437 1 432 3.28e-27 114
MsG0280010406.01.T01 AT1G05680 26.549 452 279 18 8 435 6 428 3.57e-27 114
MsG0280010406.01.T01 AT2G31750 24.783 460 295 15 1 437 1 432 4.54e-27 114
MsG0280010406.01.T01 AT2G18560 29.365 252 153 5 203 435 107 352 7.64e-27 111
MsG0280010406.01.T01 AT3G50740 25.000 464 292 16 8 436 7 449 1.08e-26 112
MsG0280010406.01.T01 AT5G14860 26.446 484 318 17 1 455 1 475 1.11e-26 112
MsG0280010406.01.T01 AT2G36780 27.571 457 284 18 7 428 13 457 9.42e-26 110
MsG0280010406.01.T01 AT4G34135 25.490 459 267 15 7 417 10 441 1.20e-25 109
MsG0280010406.01.T01 AT1G01420 35.047 214 118 6 237 435 238 445 3.85e-25 108
MsG0280010406.01.T01 AT1G01420 35.047 214 118 6 237 435 235 442 3.99e-25 108
MsG0280010406.01.T01 AT2G36760 27.155 464 279 17 6 428 12 457 5.73e-24 104
MsG0280010406.01.T01 AT3G53150 26.667 465 284 19 7 426 21 473 7.52e-24 104
MsG0280010406.01.T01 AT2G31790 25.207 484 295 19 8 459 8 456 1.42e-23 103
MsG0280010406.01.T01 AT5G59580 26.652 469 293 19 8 455 9 447 4.20e-23 102
MsG0280010406.01.T01 AT2G43820 23.868 486 272 16 8 450 7 437 5.98e-23 101
MsG0280010406.01.T01 AT4G01070 34.272 213 122 6 237 435 235 443 9.11e-23 101
MsG0280010406.01.T01 AT5G66690 24.444 450 305 14 8 436 7 442 1.64e-22 100
MsG0280010406.01.T01 AT2G43840 24.520 469 288 16 8 449 7 436 3.73e-22 99.0
MsG0280010406.01.T01 AT5G59590 30.116 259 163 8 206 455 200 449 4.75e-22 98.6
MsG0280010406.01.T01 AT2G43840 24.520 469 288 16 8 449 7 436 5.21e-22 98.6
MsG0280010406.01.T01 AT2G36970 29.386 228 149 6 216 438 229 449 1.23e-21 97.8
MsG0280010406.01.T01 AT3G53160 25.319 470 308 20 1 437 1 460 1.39e-21 97.8
MsG0280010406.01.T01 AT2G36790 27.195 467 283 20 2 428 7 456 5.97e-21 95.9
MsG0280010406.01.T01 AT2G30140 23.830 470 308 17 8 457 13 452 9.88e-21 94.7
MsG0280010406.01.T01 AT3G46670 23.028 469 329 15 2 458 3 451 1.28e-20 94.4
MsG0280010406.01.T01 AT5G26310 23.542 480 309 15 8 453 7 462 1.30e-20 94.7
MsG0280010406.01.T01 AT3G46660 34.722 216 120 10 237 446 237 437 6.09e-20 92.4
MsG0280010406.01.T01 AT2G30140 23.391 466 316 16 8 457 13 453 9.04e-20 92.0
MsG0280010406.01.T01 AT5G05880 25.508 443 293 17 1 430 1 419 1.03e-19 91.7
MsG0280010406.01.T01 AT4G15480 31.280 211 129 7 237 435 248 454 1.23e-19 91.7
MsG0280010406.01.T01 AT2G29730 25.877 456 282 18 7 429 4 436 2.36e-19 90.9
MsG0280010406.01.T01 AT3G11340 31.667 180 111 6 258 435 251 420 6.85e-19 89.4
MsG0280010406.01.T01 AT1G07250 28.139 231 154 6 237 457 246 474 8.86e-19 89.0
MsG0280010406.01.T01 AT1G01390 33.173 208 121 6 242 435 257 460 1.15e-18 89.0
MsG0280010406.01.T01 AT1G01390 33.173 208 121 6 242 435 240 443 1.19e-18 88.6
MsG0280010406.01.T01 AT3G21560 24.699 498 300 18 4 459 8 472 1.40e-18 88.6
MsG0280010406.01.T01 AT4G15500 29.952 207 131 7 258 458 267 465 1.85e-18 88.2
MsG0280010406.01.T01 AT2G30150 21.237 485 319 18 4 459 6 456 2.13e-18 87.8
MsG0280010406.01.T01 AT4G15550 30.392 204 129 6 242 437 253 451 2.35e-18 87.8
MsG0280010406.01.T01 AT3G21790 28.016 257 161 6 221 455 224 478 6.25e-18 86.7
MsG0280010406.01.T01 AT4G15490 22.560 461 312 15 1 435 1 442 1.21e-17 85.5
MsG0280010406.01.T01 AT3G16520 28.794 257 165 8 197 447 203 447 3.25e-17 84.3
MsG0280010406.01.T01 AT5G05890 27.778 216 142 6 202 406 198 410 3.34e-17 84.0
MsG0280010406.01.T01 AT1G05530 26.275 255 164 6 223 459 206 454 4.04e-17 84.0
MsG0280010406.01.T01 AT4G15280 28.505 214 135 4 260 457 296 507 4.88e-17 84.0
MsG0280010406.01.T01 AT4G15280 28.505 214 135 4 260 457 264 475 5.22e-17 83.6
MsG0280010406.01.T01 AT3G55700 30.542 203 130 7 247 446 246 440 5.93e-17 83.6
MsG0280010406.01.T01 AT1G24100 28.421 190 127 4 260 449 268 448 6.15e-17 83.2
MsG0280010406.01.T01 AT3G16520 29.268 246 156 8 197 436 203 436 6.87e-17 83.2
MsG0280010406.01.T01 AT3G16520 29.268 246 156 8 197 436 203 436 7.10e-17 83.2
MsG0280010406.01.T01 AT3G55710 29.630 189 124 5 260 446 263 444 7.16e-17 83.2
MsG0280010406.01.T01 AT2G30150 20.930 473 314 17 13 459 2 440 1.12e-16 82.4
MsG0280010406.01.T01 AT1G78270 31.111 180 111 6 260 437 289 457 1.36e-16 82.4
MsG0280010406.01.T01 AT3G22250 32.984 191 97 9 258 434 274 447 1.59e-16 82.0
MsG0280010406.01.T01 AT1G05560 26.800 250 162 7 223 457 206 449 2.92e-16 81.3
MsG0280010406.01.T01 AT1G05560 26.800 250 162 7 223 457 256 499 3.17e-16 81.3
MsG0280010406.01.T01 AT3G21760 26.222 225 146 5 249 455 258 480 3.44e-16 81.3
MsG0280010406.01.T01 AT1G06000 22.967 418 249 14 8 400 10 379 3.71e-16 80.9
MsG0280010406.01.T01 AT3G21800 28.169 213 134 4 260 455 265 475 4.16e-16 80.9
MsG0280010406.01.T01 AT3G21750 26.556 241 155 5 237 457 232 470 5.09e-16 80.5
MsG0280010406.01.T01 AT2G29710 33.898 177 97 7 260 428 267 431 5.60e-16 80.5
MsG0280010406.01.T01 AT1G07260 27.511 229 154 6 237 455 245 471 5.67e-16 80.5
MsG0280010406.01.T01 AT4G15260 26.852 216 137 5 260 457 144 356 5.85e-16 79.7
MsG0280010406.01.T01 AT3G46690 29.084 251 161 8 198 441 191 431 9.15e-16 79.7
MsG0280010406.01.T01 AT4G14090 28.643 199 131 7 254 449 255 445 9.46e-16 79.7
MsG0280010406.01.T01 AT1G30530 28.866 194 124 6 259 451 263 443 1.41e-15 79.0
MsG0280010406.01.T01 AT2G29740 29.353 201 132 6 237 429 250 448 1.50e-15 79.3
MsG0280010406.01.T01 AT5G17030 26.891 238 154 8 203 434 207 430 1.60e-15 79.0
MsG0280010406.01.T01 AT2G28080 26.027 219 142 6 215 417 220 434 2.32e-15 78.6
MsG0280010406.01.T01 AT2G23250 29.060 234 144 8 236 455 210 435 3.78e-15 77.8
MsG0280010406.01.T01 AT1G22400 28.652 178 117 5 260 437 291 458 6.74e-15 77.0
MsG0280010406.01.T01 AT2G23260 29.379 177 117 5 260 436 262 430 7.67e-15 77.0
MsG0280010406.01.T01 AT5G38010 28.514 249 153 10 207 448 207 437 1.45e-14 75.9
MsG0280010406.01.T01 AT1G22360 27.717 184 123 5 254 437 281 454 2.34e-14 75.5
MsG0280010406.01.T01 AT5G17040 27.179 195 128 6 258 451 251 432 4.92e-14 74.3
MsG0280010406.01.T01 AT5G17040 27.179 195 128 6 258 451 149 330 7.04e-14 73.2
MsG0280010406.01.T01 AT1G22380 27.717 184 123 5 254 437 284 457 1.07e-13 73.6
MsG0280010406.01.T01 AT5G05900 23.596 445 298 16 1 430 1 418 3.48e-13 71.6
MsG0280010406.01.T01 AT3G46650 29.680 219 138 8 229 441 206 414 3.79e-13 71.6
MsG0280010406.01.T01 AT3G46720 30.000 200 115 8 237 428 229 411 1.72e-12 69.7
MsG0280010406.01.T01 AT3G02100 28.804 184 108 6 260 441 279 441 1.87e-12 69.3
MsG0280010406.01.T01 AT1G22360 28.873 142 98 3 254 395 281 419 1.96e-12 69.3

Find 85 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATATCTTCAAACTGTTTA+TGG 0.073404 2:+69105779 MsG0280010406.01.T01:CDS
GGAAAACCTGTTCTGCTTTC+AGG 0.116567 2:+69105800 MsG0280010406.01.T01:CDS
CCAAAGTAAGCTGGTAATAT+TGG 0.225002 2:-69105515 None:intergenic
AAAGGAAAAGGGATTGTTTA+TGG 0.232535 2:+69106070 MsG0280010406.01.T01:CDS
ATCACAGTTCCTCATGTTAA+TGG 0.256113 2:+69105287 MsG0280010406.01.T01:CDS
AGGAACTGTGATAGGGAAAA+AGG 0.317464 2:-69105276 None:intergenic
CTAGTTTGCTTACTGAAGTT+AGG 0.331458 2:-69105652 None:intergenic
GGGTTTAGTGAAAGGGTTAA+AGG 0.333009 2:+69106052 MsG0280010406.01.T01:CDS
AAGGGATTGTTTATGGAAGT+TGG 0.335805 2:+69106077 MsG0280010406.01.T01:CDS
TTGCTTGGTCTTGAATTAAC+AGG 0.345544 2:+69105962 MsG0280010406.01.T01:CDS
ACCCTTTCACTAAACCCTTC+AGG 0.349714 2:-69106046 None:intergenic
GCCACCAAATACAACTTTAG+AGG 0.355460 2:+69105838 MsG0280010406.01.T01:CDS
ATAAGAGGGAATAAAGAAAA+TGG 0.359021 2:-69105344 None:intergenic
TTAACATGAGGAACTGTGAT+AGG 0.364501 2:-69105284 None:intergenic
TCAGTAAGCAAACTAGAGTT+TGG 0.372826 2:+69105659 MsG0280010406.01.T01:CDS
TCCTCTAAAGTTGTATTTGG+TGG 0.375237 2:-69105839 None:intergenic
GCAGCACTTAAGCCACCTAT+TGG 0.380205 2:+69105998 MsG0280010406.01.T01:CDS
GGCTTAAGTGCTGCAAGAAA+TGG 0.387827 2:-69105989 None:intergenic
ACCTCTTAATGCTAACTTGT+TGG 0.399917 2:-69105177 None:intergenic
GTGAAAGGGTTAAAGGAAAA+GGG 0.402436 2:+69106059 MsG0280010406.01.T01:CDS
CTATACGATCGCATTGGAAT+AGG 0.407064 2:+69105695 MsG0280010406.01.T01:CDS
ATCTTTCTCTGTTTGATCCA+TGG 0.408043 2:-69105375 None:intergenic
CCAATATTACCAGCTTACTT+TGG 0.414322 2:+69105515 MsG0280010406.01.T01:CDS
AAAATGGGTTGCATGGCTTA+AGG 0.414943 2:+69105862 MsG0280010406.01.T01:CDS
CAGTTTCTAGAGTTGTTGCT+TGG 0.418257 2:+69105947 MsG0280010406.01.T01:CDS
AGTGAAAGGGTTAAAGGAAA+AGG 0.420115 2:+69106058 MsG0280010406.01.T01:CDS
AGTCTCCAATACATGATATT+CGG 0.424664 2:+69105491 MsG0280010406.01.T01:CDS
AAATCAAAGAAAACTATTTG+TGG 0.424765 2:-69105425 None:intergenic
GTTGAGAAAGGTGAAGAAGA+TGG 0.427122 2:+69106280 MsG0280010406.01.T01:CDS
AAATGGGTTGCATGGCTTAA+GGG 0.427342 2:+69105863 MsG0280010406.01.T01:CDS
TCCAACAAGTTAGCATTAAG+AGG 0.432689 2:+69105176 MsG0280010406.01.T01:CDS
TATGTGGTTTATTGTGCATA+TGG 0.436390 2:+69105899 MsG0280010406.01.T01:CDS
ACCTGAAGGGTTTAGTGAAA+GGG 0.441816 2:+69106045 MsG0280010406.01.T01:CDS
AGATATTGAACTTCTTCTAA+AGG 0.443262 2:+69105394 MsG0280010406.01.T01:CDS
AGAGGACCTGAAAGCAGAAC+AGG 0.445486 2:-69105806 None:intergenic
AGAAACTGATTATGCTGTAA+TGG 0.452696 2:-69105932 None:intergenic
AAAGGTTGTAGAGAAATTGA+TGG 0.453691 2:+69105746 MsG0280010406.01.T01:CDS
AATGTTTCCATGGTTTGCTA+TGG 0.456397 2:+69105127 MsG0280010406.01.T01:CDS
TCCATGGCTGTAGCAATAAG+AGG 0.461979 2:-69105359 None:intergenic
AAAGTTGTATTTGGTGGCTC+AGG 0.466161 2:-69105833 None:intergenic
ATTCTAGAACACCCTTCTGT+TGG 0.466558 2:+69106115 MsG0280010406.01.T01:CDS
CTGGTGTTGTTGCCACGTCT+TGG 0.470989 2:+69106199 MsG0280010406.01.T01:CDS
TGTATATTTCCAAAGTAAGC+TGG 0.473316 2:-69105524 None:intergenic
TTGGACCGAATATCATGTAT+TGG 0.478223 2:-69105496 None:intergenic
TTGAGAAAGGTGAAGAAGAT+GGG 0.480318 2:+69106281 MsG0280010406.01.T01:CDS
CCCTCTTATTGCTACAGCCA+TGG 0.480560 2:+69105358 MsG0280010406.01.T01:CDS
AACTTGATGCATGAATCATC+AGG 0.482297 2:-69105608 None:intergenic
GAAGTTGTTTCAGCATTATG+AGG 0.483600 2:-69105314 None:intergenic
TACCTGAAGGGTTTAGTGAA+AGG 0.490614 2:+69106044 MsG0280010406.01.T01:CDS
GGGATTCAAACATGGTTATG+TGG 0.490996 2:+69105883 MsG0280010406.01.T01:CDS
ATGAGTACAAAGTTCAAGAT+TGG 0.492634 2:+69106250 MsG0280010406.01.T01:CDS
TTGAAGATGCTTTACCTGAA+GGG 0.494802 2:+69106032 MsG0280010406.01.T01:CDS
TCAATCGACTCAAATCCAAT+AGG 0.497326 2:-69106013 None:intergenic
ATGTTTCCATGGTTTGCTAT+GGG 0.504571 2:+69105128 MsG0280010406.01.T01:CDS
TGCACATAGCAATGTTTCCA+TGG 0.504753 2:+69105117 MsG0280010406.01.T01:CDS
TTGTTGGAGAAGTGAAGATA+TGG 0.515979 2:-69105161 None:intergenic
TCAGATGCAGTTGCTTTCAA+AGG 0.518452 2:+69105728 MsG0280010406.01.T01:CDS
CTTCAGTTAAATCTCTACCT+TGG 0.530118 2:-69105556 None:intergenic
ATTGAAGATGCTTTACCTGA+AGG 0.535563 2:+69106031 MsG0280010406.01.T01:CDS
TTGTTTCAGCATTATGAGGA+AGG 0.540636 2:-69105310 None:intergenic
ATTGGTGTAGAAGTTGAGAA+AGG 0.554703 2:+69106268 MsG0280010406.01.T01:CDS
TAACATGAGGAACTGTGATA+GGG 0.557835 2:-69105283 None:intergenic
AAGGTTGTAGAGAAATTGAT+GGG 0.562891 2:+69105747 MsG0280010406.01.T01:CDS
TGGAGCTGCTTCTATAACTG+AGG 0.562901 2:+69106156 MsG0280010406.01.T01:CDS
ACTTGTTAACACGTGTCAGC+TGG 0.567449 2:+69106180 MsG0280010406.01.T01:CDS
TTTGGTGGCTCAGGTAAAAG+AGG 0.569758 2:-69105824 None:intergenic
ATGTATGATGAGAATGAAGA+TGG 0.573868 2:+69106346 MsG0280010406.01.T01:CDS
ATTGCTATGTGCAAAGGTGA+AGG 0.578682 2:-69105107 None:intergenic
CTTCTACTATACGATCGCAT+TGG 0.580299 2:+69105689 MsG0280010406.01.T01:CDS
TCTTGCATTCATGATATGAT+CGG 0.585265 2:-69106224 None:intergenic
GTTATGAAACATCCAACAGA+AGG 0.588945 2:-69106127 None:intergenic
GAATCATCAGGGAACTCTGA+AGG 0.590116 2:-69105596 None:intergenic
TGGCTTAAGGGATTCAAACA+TGG 0.603215 2:+69105875 MsG0280010406.01.T01:CDS
AGCAAACTAGAGTTTGGCAG+TGG 0.611149 2:+69105665 MsG0280010406.01.T01:CDS
ATCGACTCAAATCCAATAGG+TGG 0.629368 2:-69106010 None:intergenic
ACTTGATGCATGAATCATCA+GGG 0.631590 2:-69105607 None:intergenic
CCATGGCTGTAGCAATAAGA+GGG 0.634014 2:-69105358 None:intergenic
AAGTGTCCCATAGCAAACCA+TGG 0.639716 2:-69105134 None:intergenic
GGAGCTGCTTCTATAACTGA+GGG 0.647559 2:+69106157 MsG0280010406.01.T01:CDS
GGAAACATTGCTATGTGCAA+AGG 0.662429 2:-69105113 None:intergenic
TGAGGAAGGCCATTAACATG+AGG 0.672414 2:-69105296 None:intergenic
ATATGATCGGAACCAAGACG+TGG 0.688479 2:-69106211 None:intergenic
TTATGAAACATCCAACAGAA+GGG 0.698749 2:-69106126 None:intergenic
AATATACAAAGACAAAACCA+AGG 0.715036 2:+69105539 MsG0280010406.01.T01:CDS
GGATGTTTCATAACACACTG+TGG 0.766209 2:+69106136 MsG0280010406.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTGATTTTCAATAT+TGG + Chr2:69105435-69105454 MsG0280010406.01.T01:CDS 15.0%
!! AAATCAAAGAAAACTATTTG+TGG - Chr2:69105428-69105447 None:intergenic 20.0%
!!! CAATAAAAAGTTTCTCATTT+TGG - Chr2:69106395-69106414 None:intergenic 20.0%
! AATATACAAAGACAAAACCA+AGG + Chr2:69105539-69105558 MsG0280010406.01.T01:CDS 25.0%
! AGATATTGAACTTCTTCTAA+AGG + Chr2:69105394-69105413 MsG0280010406.01.T01:CDS 25.0%
! ATAAGAGGGAATAAAGAAAA+TGG - Chr2:69105347-69105366 None:intergenic 25.0%
! GAATATCTTCAAACTGTTTA+TGG + Chr2:69105779-69105798 MsG0280010406.01.T01:CDS 25.0%
!! ATACAACTTTAGAGGAAAAA+TGG + Chr2:69105846-69105865 MsG0280010406.01.T01:CDS 25.0%
!! TACAACTTTAGAGGAAAAAT+GGG + Chr2:69105847-69105866 MsG0280010406.01.T01:CDS 25.0%
!!! AACTTGTTGAGTGTATTTTT+AGG - Chr2:69105224-69105243 None:intergenic 25.0%
!!! ACTTGTTGAGTGTATTTTTA+GGG - Chr2:69105223-69105242 None:intergenic 25.0%
!!! TTTTCCTCTAAAGTTGTATT+TGG - Chr2:69105845-69105864 None:intergenic 25.0%
AAAGGAAAAGGGATTGTTTA+TGG + Chr2:69106070-69106089 MsG0280010406.01.T01:CDS 30.0%
AAAGGTTGTAGAGAAATTGA+TGG + Chr2:69105746-69105765 MsG0280010406.01.T01:CDS 30.0%
AAGGTTGTAGAGAAATTGAT+GGG + Chr2:69105747-69105766 MsG0280010406.01.T01:CDS 30.0%
AGAAACTGATTATGCTGTAA+TGG - Chr2:69105935-69105954 None:intergenic 30.0%
AGTCTCCAATACATGATATT+CGG + Chr2:69105491-69105510 MsG0280010406.01.T01:CDS 30.0%
ATGAGTACAAAGTTCAAGAT+TGG + Chr2:69106250-69106269 MsG0280010406.01.T01:CDS 30.0%
ATGTATGATGAGAATGAAGA+TGG + Chr2:69106346-69106365 MsG0280010406.01.T01:CDS 30.0%
GGGAAAAAGGTAATAAGATT+TGG - Chr2:69105266-69105285 None:intergenic 30.0%
TATGTGGTTTATTGTGCATA+TGG + Chr2:69105899-69105918 MsG0280010406.01.T01:CDS 30.0%
TCTTGCATTCATGATATGAT+CGG - Chr2:69106227-69106246 None:intergenic 30.0%
TGTATATTTCCAAAGTAAGC+TGG - Chr2:69105527-69105546 None:intergenic 30.0%
TTATGAAACATCCAACAGAA+GGG - Chr2:69106129-69106148 None:intergenic 30.0%
AACTTGATGCATGAATCATC+AGG - Chr2:69105611-69105630 None:intergenic 35.0%
AAGGGATTGTTTATGGAAGT+TGG + Chr2:69106077-69106096 MsG0280010406.01.T01:CDS 35.0%
ACTTGATGCATGAATCATCA+GGG - Chr2:69105610-69105629 None:intergenic 35.0%
AGTGAAAGGGTTAAAGGAAA+AGG + Chr2:69106058-69106077 MsG0280010406.01.T01:CDS 35.0%
ATCACAGTTCCTCATGTTAA+TGG + Chr2:69105287-69105306 MsG0280010406.01.T01:CDS 35.0%
ATCTTTCTCTGTTTGATCCA+TGG - Chr2:69105378-69105397 None:intergenic 35.0%
ATTGAAGATGCTTTACCTGA+AGG + Chr2:69106031-69106050 MsG0280010406.01.T01:CDS 35.0%
ATTGGTGTAGAAGTTGAGAA+AGG + Chr2:69106268-69106287 MsG0280010406.01.T01:CDS 35.0%
CCAAACTTGACTCAAAAACT+TGG + Chr2:69105461-69105480 MsG0280010406.01.T01:CDS 35.0%
CCAAAGTAAGCTGGTAATAT+TGG - Chr2:69105518-69105537 None:intergenic 35.0%
CCAATATTACCAGCTTACTT+TGG + Chr2:69105515-69105534 MsG0280010406.01.T01:CDS 35.0%
CTTCAGTTAAATCTCTACCT+TGG - Chr2:69105559-69105578 None:intergenic 35.0%
GTGAAAGGGTTAAAGGAAAA+GGG + Chr2:69106059-69106078 MsG0280010406.01.T01:CDS 35.0%
GTTATGAAACATCCAACAGA+AGG - Chr2:69106130-69106149 None:intergenic 35.0%
TAACATGAGGAACTGTGATA+GGG - Chr2:69105286-69105305 None:intergenic 35.0%
TCAGTAAGCAAACTAGAGTT+TGG + Chr2:69105659-69105678 MsG0280010406.01.T01:CDS 35.0%
TCCAACAAGTTAGCATTAAG+AGG + Chr2:69105176-69105195 MsG0280010406.01.T01:CDS 35.0%
TTAACATGAGGAACTGTGAT+AGG - Chr2:69105287-69105306 None:intergenic 35.0%
TTGAAGATGCTTTACCTGAA+GGG + Chr2:69106032-69106051 MsG0280010406.01.T01:CDS 35.0%
TTGAGAAAGGTGAAGAAGAT+GGG + Chr2:69106281-69106300 MsG0280010406.01.T01:CDS 35.0%
TTGGACCGAATATCATGTAT+TGG - Chr2:69105499-69105518 None:intergenic 35.0%
TTGTTGGAGAAGTGAAGATA+TGG - Chr2:69105164-69105183 None:intergenic 35.0%
TTGTTTCAGCATTATGAGGA+AGG - Chr2:69105313-69105332 None:intergenic 35.0%
! ACCTCTTAATGCTAACTTGT+TGG - Chr2:69105180-69105199 None:intergenic 35.0%
! GAAGTTGTTTCAGCATTATG+AGG - Chr2:69105317-69105336 None:intergenic 35.0%
! TCAATCGACTCAAATCCAAT+AGG - Chr2:69106016-69106035 None:intergenic 35.0%
!! AATGTTTCCATGGTTTGCTA+TGG + Chr2:69105127-69105146 MsG0280010406.01.T01:CDS 35.0%
!! ATGTTTCCATGGTTTGCTAT+GGG + Chr2:69105128-69105147 MsG0280010406.01.T01:CDS 35.0%
!! CTAGTTTGCTTACTGAAGTT+AGG - Chr2:69105655-69105674 None:intergenic 35.0%
!! TCCTCTAAAGTTGTATTTGG+TGG - Chr2:69105842-69105861 None:intergenic 35.0%
!! TTGCTTGGTCTTGAATTAAC+AGG + Chr2:69105962-69105981 MsG0280010406.01.T01:CDS 35.0%
!!! CCAAGTTTTTGAGTCAAGTT+TGG - Chr2:69105464-69105483 None:intergenic 35.0%
ACCTGAAGGGTTTAGTGAAA+GGG + Chr2:69106045-69106064 MsG0280010406.01.T01:CDS 40.0%
AGGAACTGTGATAGGGAAAA+AGG - Chr2:69105279-69105298 None:intergenic 40.0%
ATTGCTATGTGCAAAGGTGA+AGG - Chr2:69105110-69105129 None:intergenic 40.0%
CTATACGATCGCATTGGAAT+AGG + Chr2:69105695-69105714 MsG0280010406.01.T01:CDS 40.0%
CTTCTACTATACGATCGCAT+TGG + Chr2:69105689-69105708 MsG0280010406.01.T01:CDS 40.0%
GCCACCAAATACAACTTTAG+AGG + Chr2:69105838-69105857 MsG0280010406.01.T01:CDS 40.0%
GGAAACATTGCTATGTGCAA+AGG - Chr2:69105116-69105135 None:intergenic 40.0%
GGATGTTTCATAACACACTG+TGG + Chr2:69106136-69106155 MsG0280010406.01.T01:CDS 40.0%
GGGATTCAAACATGGTTATG+TGG + Chr2:69105883-69105902 MsG0280010406.01.T01:CDS 40.0%
GGGTTTAGTGAAAGGGTTAA+AGG + Chr2:69106052-69106071 MsG0280010406.01.T01:CDS 40.0%
GTTGAGAAAGGTGAAGAAGA+TGG + Chr2:69106280-69106299 MsG0280010406.01.T01:CDS 40.0%
TACCTGAAGGGTTTAGTGAA+AGG + Chr2:69106044-69106063 MsG0280010406.01.T01:CDS 40.0%
TGCACATAGCAATGTTTCCA+TGG + Chr2:69105117-69105136 MsG0280010406.01.T01:CDS 40.0%
TGGCTTAAGGGATTCAAACA+TGG + Chr2:69105875-69105894 MsG0280010406.01.T01:CDS 40.0%
! AAAGTTGTATTTGGTGGCTC+AGG - Chr2:69105836-69105855 None:intergenic 40.0%
! ATCGACTCAAATCCAATAGG+TGG - Chr2:69106013-69106032 None:intergenic 40.0%
! TCAGATGCAGTTGCTTTCAA+AGG + Chr2:69105728-69105747 MsG0280010406.01.T01:CDS 40.0%
!! AAAATGGGTTGCATGGCTTA+AGG + Chr2:69105862-69105881 MsG0280010406.01.T01:CDS 40.0%
!! AAATGGGTTGCATGGCTTAA+GGG + Chr2:69105863-69105882 MsG0280010406.01.T01:CDS 40.0%
!! ATTCTAGAACACCCTTCTGT+TGG + Chr2:69106115-69106134 MsG0280010406.01.T01:CDS 40.0%
!! CAGTTTCTAGAGTTGTTGCT+TGG + Chr2:69105947-69105966 MsG0280010406.01.T01:CDS 40.0%
!! TAGAGGAAAAATGGGTTGCA+TGG + Chr2:69105855-69105874 MsG0280010406.01.T01:CDS 40.0%
AAGTGTCCCATAGCAAACCA+TGG - Chr2:69105137-69105156 None:intergenic 45.0%
ACCCTTTCACTAAACCCTTC+AGG - Chr2:69106049-69106068 None:intergenic 45.0%
AGCAAACTAGAGTTTGGCAG+TGG + Chr2:69105665-69105684 MsG0280010406.01.T01:CDS 45.0%
ATATGATCGGAACCAAGACG+TGG - Chr2:69106214-69106233 None:intergenic 45.0%
CCATGGCTGTAGCAATAAGA+GGG - Chr2:69105361-69105380 None:intergenic 45.0%
GAATCATCAGGGAACTCTGA+AGG - Chr2:69105599-69105618 None:intergenic 45.0%
GGAAAACCTGTTCTGCTTTC+AGG + Chr2:69105800-69105819 MsG0280010406.01.T01:CDS 45.0%
GGAGCTGCTTCTATAACTGA+GGG + Chr2:69106157-69106176 MsG0280010406.01.T01:CDS 45.0%
TCCATGGCTGTAGCAATAAG+AGG - Chr2:69105362-69105381 None:intergenic 45.0%
TGAGGAAGGCCATTAACATG+AGG - Chr2:69105299-69105318 None:intergenic 45.0%
TGGAGCTGCTTCTATAACTG+AGG + Chr2:69106156-69106175 MsG0280010406.01.T01:CDS 45.0%
! ACTTGTTAACACGTGTCAGC+TGG + Chr2:69106180-69106199 MsG0280010406.01.T01:CDS 45.0%
! GGCTTAAGTGCTGCAAGAAA+TGG - Chr2:69105992-69106011 None:intergenic 45.0%
! TTTGGTGGCTCAGGTAAAAG+AGG - Chr2:69105827-69105846 None:intergenic 45.0%
AGAGGACCTGAAAGCAGAAC+AGG - Chr2:69105809-69105828 None:intergenic 50.0%
CCCTCTTATTGCTACAGCCA+TGG + Chr2:69105358-69105377 MsG0280010406.01.T01:CDS 50.0%
GCAGCACTTAAGCCACCTAT+TGG + Chr2:69105998-69106017 MsG0280010406.01.T01:CDS 50.0%
!! CTGGTGTTGTTGCCACGTCT+TGG + Chr2:69106199-69106218 MsG0280010406.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 69105098 69106477 69105098 ID=MsG0280010406.01;Name=MsG0280010406.01
Chr2 mRNA 69105098 69106477 69105098 ID=MsG0280010406.01.T01;Parent=MsG0280010406.01;Name=MsG0280010406.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|459
Chr2 exon 69105098 69106477 69105098 ID=MsG0280010406.01.T01:exon:26676;Parent=MsG0280010406.01.T01
Chr2 CDS 69105098 69106477 69105098 ID=MsG0280010406.01.T01:cds;Parent=MsG0280010406.01.T01
Gene Sequence

>MsG0280010406.01.T01

ATGGATGCTCCTTCACCTTTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACACTTGACACCATATCTTCACTTCTCCAACAAGTTAGCATTAAGAGGTCACAAAATCTCATTCTTCATCCCTAAAAATACACTCAACAAGTTACAACATCTCAATCTTCATCCAAATCTTATTACCTTTTTCCCTATCACAGTTCCTCATGTTAATGGCCTTCCTCATAATGCTGAAACAACTTCAGATGTACCATTTTCTTTATTCCCTCTTATTGCTACAGCCATGGATCAAACAGAGAAAGATATTGAACTTCTTCTAAAGGAAATAAAGCCACAAATAGTTTTCTTTGATTTTCAATATTGGCTACCAAACTTGACTCAAAAACTTGGCATCAAAAGTCTCCAATACATGATATTCGGTCCAATATTACCAGCTTACTTTGGAAATATACAAAGACAAAACCAAGGTAGAGATTTAACTGAAGTTGATCTCAAGAAACATCCTTCAGAGTTCCCTGATGATTCATGCATCAAGTTTCATTCTCACGAACTTCGATTCCTAACTTCAGTAAGCAAACTAGAGTTTGGCAGTGGTCTTCTACTATACGATCGCATTGGAATAGGAACAAACTTGTCAGATGCAGTTGCTTTCAAAGGTTGTAGAGAAATTGATGGGATATATGCTGAATATCTTCAAACTGTTTATGGAAAACCTGTTCTGCTTTCAGGTCCTCTTTTACCTGAGCCACCAAATACAACTTTAGAGGAAAAATGGGTTGCATGGCTTAAGGGATTCAAACATGGTTATGTGGTTTATTGTGCATATGGAAGTGAAAGTCCATTACAGCATAATCAGTTTCTAGAGTTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCACCTATTGGATTTGAGTCGATTGAAGATGCTTTACCTGAAGGGTTTAGTGAAAGGGTTAAAGGAAAAGGGATTGTTTATGGAAGTTGGATTCAACAACAATTGATTCTAGAACACCCTTCTGTTGGATGTTTCATAACACACTGTGGAGCTGCTTCTATAACTGAGGGACTTGTTAACACGTGTCAGCTGGTGTTGTTGCCACGTCTTGGTTCCGATCATATCATGAATGCAAGAGTGATGAGTACAAAGTTCAAGATTGGTGTAGAAGTTGAGAAAGGTGAAGAAGATGGGTTGTTTACAAAAGAAAGTGTGTGCAAAGCTGTGAAGATAGTTATGTATGATGAGAATGAAGATGGAAAAGAAGTAAGAGATAATCATGCCAAAATGAGAAACTTTTTATTGAGCAGCAATTTAGAATCTTCATGTCTTGATAGTTTCTGTGAGAAACTTTATGATTTGCTCTAG

Protein sequence

>MsG0280010406.01.T01

MDAPSPLHIAMFPWFAMGHLTPYLHFSNKLALRGHKISFFIPKNTLNKLQHLNLHPNLITFFPITVPHVNGLPHNAETTSDVPFSLFPLIATAMDQTEKDIELLLKEIKPQIVFFDFQYWLPNLTQKLGIKSLQYMIFGPILPAYFGNIQRQNQGRDLTEVDLKKHPSEFPDDSCIKFHSHELRFLTSVSKLEFGSGLLLYDRIGIGTNLSDAVAFKGCREIDGIYAEYLQTVYGKPVLLSGPLLPEPPNTTLEEKWVAWLKGFKHGYVVYCAYGSESPLQHNQFLELLLGLELTGFPFLAALKPPIGFESIEDALPEGFSERVKGKGIVYGSWIQQQLILEHPSVGCFITHCGAASITEGLVNTCQLVLLPRLGSDHIMNARVMSTKFKIGVEVEKGEEDGLFTKESVCKAVKIVMYDENEDGKEVRDNHAKMRNFLLSSNLESSCLDSFCEKLYDLL*