AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012055.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012055.01.T01 MTR_5g055940 89.083 458 20 2 1 446 103 542 0.0 813
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012055.01.T01 AT1G48520 75.163 459 84 2 1 447 109 549 0.0 724
MsG0380012055.01.T01 AT1G48520 74.177 395 72 2 1 383 109 485 0.0 617
MsG0380012055.01.T01 AT1G48520 73.995 373 67 2 1 361 109 463 0.0 587

Find 104 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGAGGTTGGTTAGGTATT+TGG 0.118798 3:-10222690 MsG0380012055.01.T01:CDS
ACTGATGGTTCCACCTTTAA+TGG 0.165110 3:+10221392 None:intergenic
TTTCACAGGTTGATCTAAAT+AGG 0.190504 3:-10222793 MsG0380012055.01.T01:intron
ATTGAGTTTGCTGTTAAATT+AGG 0.201148 3:-10224918 MsG0380012055.01.T01:CDS
GATGTTCCCATTGCGAGTTC+TGG 0.223198 3:-10224798 MsG0380012055.01.T01:CDS
TGTAAGCTTAATGTCATTTA+TGG 0.229604 3:+10221443 None:intergenic
GCGTTGATTGCTTCCATTAA+AGG 0.231426 3:-10221405 MsG0380012055.01.T01:CDS
CAGAGGTTGGTTAGGTATTT+GGG 0.234354 3:-10222689 MsG0380012055.01.T01:CDS
CCCATTGGGCAGTCAAAGTT+TGG 0.241527 3:-10222605 MsG0380012055.01.T01:CDS
CGGTATTGCTCAACCTGTTT+CGG 0.296397 3:+10220353 None:intergenic
GAATACCATCTACATATTCT+TGG 0.309724 3:+10222141 None:intergenic
ATAACCTTATTGTTTATAAC+AGG 0.316610 3:+10224939 None:intergenic
TTTACCTGTTATAAACAATA+AGG 0.334134 3:-10224943 MsG0380012055.01.T01:CDS
TTTATCCTGATTTGCCTAAA+GGG 0.349525 3:-10224839 MsG0380012055.01.T01:CDS
CTTTCCGATCTTTCCACTGA+TGG 0.361503 3:+10221377 None:intergenic
ATGTTCCCATTGCGAGTTCT+GGG 0.363105 3:-10224797 MsG0380012055.01.T01:CDS
CTCCTTGACACTTCCACCCT+TGG 0.375228 3:+10220693 None:intergenic
AATACCATCTACATATTCTT+GGG 0.379988 3:+10222142 None:intergenic
TTCACAGGTTGATCTAAATA+GGG 0.390297 3:-10222792 MsG0380012055.01.T01:intron
CCAGTTTGTATGGGGTTACC+AGG 0.393004 3:-10224969 MsG0380012056.01.T01:exon
CGTTTGATTCCAAGTTTGAT+AGG 0.394421 3:-10224872 MsG0380012055.01.T01:CDS
TGCGAAATCTGATACCCTTT+AGG 0.399560 3:+10224825 None:intergenic
CAGAATTACAGAGGTTGGTT+AGG 0.400205 3:-10222697 MsG0380012055.01.T01:CDS
TGATACCCTTTAGGCAAATC+AGG 0.403892 3:+10224834 None:intergenic
ATCAACGCAGCTAACTCTTC+AGG 0.411626 3:+10221420 None:intergenic
TGGGATTACTAGGGTTCATA+TGG 0.413274 3:-10224580 MsG0380012055.01.T01:CDS
ACTTGCTCTTAATTGCGAAT+TGG 0.416189 3:-10224895 MsG0380012055.01.T01:CDS
ATAAGAGGTTTGGGATTACT+AGG 0.423820 3:-10224590 MsG0380012055.01.T01:CDS
ACTGATGGAAGGTCTGGTTC+TGG 0.424146 3:+10222173 None:intergenic
AGATATGAAAAGATGGGATT+AGG 0.425555 3:-10222080 MsG0380012055.01.T01:CDS
TCAATACCATTTCTCATGTC+AGG 0.427491 3:+10222737 None:intergenic
ATATTGTTTCCTATCAAACT+TGG 0.433526 3:+10224863 None:intergenic
GTTGATATTCCCGTGGAGTT+TGG 0.437541 3:-10224621 MsG0380012055.01.T01:CDS
GTTGATATTCCCGTGGAGTT+TGG 0.437541 3:-10224765 MsG0380012055.01.T01:CDS
ATGCAAAGCTGGTTGCCAAC+TGG 0.442987 3:-10221509 MsG0380012055.01.T01:CDS
TCTACTTAACAAGATTCTCT+TGG 0.443250 3:-10220168 MsG0380012055.01.T01:CDS
ATATTCCCGTGGAGTTTGGT+GGG 0.444865 3:-10224617 MsG0380012055.01.T01:CDS
ATATTCCCGTGGAGTTTGGT+GGG 0.444865 3:-10224761 MsG0380012055.01.T01:CDS
ACGTATCAGTACGGCCCATT+GGG 0.446004 3:-10222619 MsG0380012055.01.T01:CDS
GATTGCAGATAATCCGAAAC+AGG 0.446790 3:-10220366 MsG0380012055.01.T01:CDS
GTTCATATGGAAGAGGATGC+TGG 0.459070 3:-10224567 MsG0380012055.01.T01:CDS
CCATTGGGCAGTCAAAGTTT+GGG 0.460696 3:-10222604 MsG0380012055.01.T01:CDS
ATTCCCGTGGAGTTTGGTGG+GGG 0.464352 3:-10224615 MsG0380012055.01.T01:CDS
ATTCCCGTGGAGTTTGGTGG+GGG 0.464352 3:-10224759 MsG0380012055.01.T01:CDS
CCAAACTTTGACTGCCCAAT+GGG 0.473694 3:+10222605 None:intergenic
AGGATTACTGATGGAAGGTC+TGG 0.474753 3:+10222167 None:intergenic
ACGTAGAAGATATGAAAAGA+TGG 0.477653 3:-10222087 MsG0380012055.01.T01:CDS
CTTTCCCAAGAATATGTAGA+TGG 0.478868 3:-10222146 MsG0380012055.01.T01:CDS
TGCAGCAGAATTACAGAGGT+TGG 0.481825 3:-10222702 MsG0380012055.01.T01:CDS
AAGCTATTGCATACTGAAAA+CGG 0.483622 3:-10224543 MsG0380012055.01.T01:CDS
TTTGATGCTACACTTGCAAA+AGG 0.484256 3:-10221537 MsG0380012055.01.T01:CDS
TCTGAGCCTGACATGAGAAA+TGG 0.487908 3:-10222743 MsG0380012055.01.T01:CDS
GATATTCCCGTGGAGTTTGG+TGG 0.490584 3:-10224618 MsG0380012055.01.T01:CDS
GATATTCCCGTGGAGTTTGG+TGG 0.490584 3:-10224762 MsG0380012055.01.T01:CDS
CAGGTTGATCTAAATAGGGC+AGG 0.499652 3:-10222788 MsG0380012055.01.T01:CDS
CGTAGAAGATATGAAAAGAT+GGG 0.500188 3:-10222086 MsG0380012055.01.T01:CDS
AACGTATCAGTACGGCCCAT+TGG 0.514772 3:-10222620 MsG0380012055.01.T01:CDS
GCACCGACACTTCAGATTGA+AGG 0.516545 3:+10220098 None:intergenic
TCTAAAGGCAAGGCAAATCC+AGG 0.518873 3:-10220191 MsG0380012055.01.T01:CDS
TGTCCAAATGCAGGTAATGA+AGG 0.520301 3:-10220216 MsG0380012055.01.T01:intron
CCCAAACTTTGACTGCCCAA+TGG 0.527248 3:+10222604 None:intergenic
CATCTACATATTCTTGGGAA+AGG 0.533473 3:+10222147 None:intergenic
CAGGTAATGAAGGTATCTAA+AGG 0.534214 3:-10220206 MsG0380012055.01.T01:CDS
AGAAACCCAGAACTCGCAAT+GGG 0.535095 3:+10224792 None:intergenic
AAAAGGTGCCGATGCAAAGC+TGG 0.538518 3:-10221520 MsG0380012055.01.T01:CDS
TCTTGGGAAAGGATTACTGA+TGG 0.545803 3:+10222158 None:intergenic
TTCATATGGAAGAGGATGCT+GGG 0.547037 3:-10224566 MsG0380012055.01.T01:CDS
TACTAGGGTTCATATGGAAG+AGG 0.547980 3:-10224574 MsG0380012055.01.T01:CDS
GCAGTCAAAGTTTGGGACAA+AGG 0.548125 3:-10222597 MsG0380012055.01.T01:intron
ATTAAAGGTGGAACCATCAG+TGG 0.552771 3:-10221390 MsG0380012055.01.T01:CDS
GGAACCATCAGTGGAAAGAT+CGG 0.555215 3:-10221381 MsG0380012055.01.T01:CDS
ACTATTTGAGCTGTTAGCCA+AGG 0.556875 3:-10220710 MsG0380012055.01.T01:CDS
GTTGGCAACCAGCTTTGCAT+CGG 0.558741 3:+10221512 None:intergenic
TTGATTGCTTCCATTAAAGG+TGG 0.560754 3:-10221402 MsG0380012055.01.T01:CDS
AGAATCTTGTTAAGTAGACC+TGG 0.563708 3:+10220173 None:intergenic
AGGTATTTGGGAGTGAGCAA+TGG 0.564171 3:-10222677 MsG0380012055.01.T01:CDS
TATTCCCGTGGAGTTTGGTG+GGG 0.566703 3:-10224616 MsG0380012055.01.T01:CDS
TATTCCCGTGGAGTTTGGTG+GGG 0.566703 3:-10224760 MsG0380012055.01.T01:CDS
TGAAAACGGAAATTACTCTC+AGG 0.569751 3:-10224529 MsG0380012055.01.T01:intron
TAAGAGGTTTGGGATTACTA+GGG 0.574696 3:-10224589 MsG0380012055.01.T01:CDS
TTTGAGCTGTTAGCCAAGGG+TGG 0.582248 3:-10220706 MsG0380012055.01.T01:CDS
AGCCAAGGGTGGAAGTGTCA+AGG 0.585022 3:-10220695 MsG0380012055.01.T01:CDS
AGGTTGATCTAAATAGGGCA+GGG 0.588792 3:-10222787 MsG0380012055.01.T01:CDS
GGGAAAGGATTACTGATGGA+AGG 0.592489 3:+10222162 None:intergenic
CTATTTGAGCTGTTAGCCAA+GGG 0.599372 3:-10220709 MsG0380012055.01.T01:CDS
AGCAATGGCAACATGCAAGA+AGG 0.599517 3:-10222662 MsG0380012055.01.T01:CDS
AATGAAGGTATCTAAAGGCA+AGG 0.600642 3:-10220201 MsG0380012055.01.T01:CDS
TTTATAACAGGTAAAGCACC+TGG 0.601351 3:+10224951 None:intergenic
AAGAAACCCAGAACTCGCAA+TGG 0.602640 3:+10224791 None:intergenic
TTCCCGTGGAGTTTGGTGGG+GGG 0.605940 3:-10224614 MsG0380012055.01.T01:CDS
TTCCCGTGGAGTTTGGTGGG+GGG 0.605940 3:-10224758 MsG0380012055.01.T01:CDS
AATATCGCTCATTATCCAGT+TGG 0.615455 3:+10221494 None:intergenic
GGAGGCAAAACGAAACTCCA+AGG 0.624975 3:-10220329 MsG0380012055.01.T01:CDS
TCAGAAACTATCTCTAGCAA+AGG 0.630453 3:+10222761 None:intergenic
CAGTGGAAAGATCGGAAAGG+AGG 0.630617 3:-10221373 MsG0380012055.01.T01:intron
GGTTGATCTAAATAGGGCAG+GGG 0.638621 3:-10222786 MsG0380012055.01.T01:CDS
GCGATGTAAACGTATCAGTA+CGG 0.639235 3:-10222628 MsG0380012055.01.T01:CDS
CAGGTGCAACTTCACAGTCA+AGG 0.642894 3:-10222409 MsG0380012055.01.T01:CDS
TCTTGATGTTGATATTCCCG+TGG 0.662734 3:-10224628 MsG0380012055.01.T01:CDS
TCTTGATGTTGATATTCCCG+TGG 0.662734 3:-10224772 MsG0380012055.01.T01:CDS
CATCAGTGGAAAGATCGGAA+AGG 0.695684 3:-10221376 MsG0380012055.01.T01:CDS
CAGGTTGAGCAATACCGAGG+AGG 0.701313 3:-10220347 MsG0380012055.01.T01:CDS
AATATGCAGCAGAATTACAG+AGG 0.709133 3:-10222706 MsG0380012055.01.T01:CDS
AAACAGGTTGAGCAATACCG+AGG 0.723621 3:-10220350 MsG0380012055.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTTTAATTAATT+TGG - Chr3:10220931-10220950 MsG0380012055.01.T01:intron 0.0%
!! AACTATACAATAAATGAATA+CGG + Chr3:10221721-10221740 None:intergenic 15.0%
!! AATAAAACAAAGATGATAAA+AGG + Chr3:10224831-10224850 None:intergenic 15.0%
!! ATAAAACAAAGATGATAAAA+GGG + Chr3:10224830-10224849 None:intergenic 15.0%
!! ATTGAGAAAATAAAAAATCA+CGG + Chr3:10223493-10223512 None:intergenic 15.0%
!! TACAAGTATATTAAATTTGA+TGG - Chr3:10222252-10222271 MsG0380012055.01.T01:intron 15.0%
!! TACTAATATATAAAGACAAA+TGG + Chr3:10223959-10223978 None:intergenic 15.0%
!! TTTCTTCTTTAAATATAATC+AGG - Chr3:10222096-10222115 MsG0380012055.01.T01:CDS 15.0%
!!! AATCATACATTTGTTATAAT+CGG - Chr3:10224292-10224311 MsG0380012055.01.T01:intron 15.0%
!!! AATTTTGTTTGTTTAGTTTT+TGG - Chr3:10221481-10221500 MsG0380012055.01.T01:CDS 15.0%
!!! ATTTTCTTTTTTCTTTCTAT+TGG - Chr3:10221974-10221993 MsG0380012055.01.T01:intron 15.0%
!!! CAACTTTATTGATTATTATT+TGG - Chr3:10224634-10224653 MsG0380012055.01.T01:CDS 15.0%
!!! TTCTATTTTTGTAGAATAAA+AGG - Chr3:10221776-10221795 MsG0380012055.01.T01:intron 15.0%
!! AACTATTACAATGAGAAAAA+AGG - Chr3:10222851-10222870 MsG0380012055.01.T01:intron 20.0%
!! AAGTTAAATAAGTGTATGTT+TGG + Chr3:10220871-10220890 None:intergenic 20.0%
!! ATAACCTTATTGTTTATAAC+AGG + Chr3:10220137-10220156 None:intergenic 20.0%
!! ATTATGATCAATTATTGTTC+TGG - Chr3:10222572-10222591 MsG0380012055.01.T01:intron 20.0%
!! GCAATGTAATATTAACAAAT+AGG - Chr3:10222545-10222564 MsG0380012055.01.T01:intron 20.0%
!! TAAAACAAAGATGATAAAAG+GGG + Chr3:10224829-10224848 None:intergenic 20.0%
!! TAAAGAAATTGTTTCAATCA+GGG - Chr3:10221162-10221181 MsG0380012055.01.T01:intron 20.0%
!! TGACTCAATTATATATAAAC+TGG + Chr3:10224468-10224487 None:intergenic 20.0%
!! TTTACCTGTTATAAACAATA+AGG - Chr3:10220130-10220149 MsG0380012055.01.T01:exon 20.0%
!!! AACATACACTTATTTAACTT+TGG - Chr3:10220871-10220890 MsG0380012055.01.T01:intron 20.0%
!!! ATTTCTAGAGAAATAAAAAC+TGG - Chr3:10223373-10223392 MsG0380012055.01.T01:intron 20.0%
!!! ATTTTATAAATTAAAGCCCT+TGG + Chr3:10223791-10223810 None:intergenic 20.0%
!!! CTATTGATTTTGAAATTTCA+AGG - Chr3:10222641-10222660 MsG0380012055.01.T01:CDS 20.0%
!!! GCATTTCAATATTTGTTTTT+CGG - Chr3:10221813-10221832 MsG0380012055.01.T01:intron 20.0%
!!! GTGATTTTTTATTTTCTCAA+TGG - Chr3:10223492-10223511 MsG0380012055.01.T01:intron 20.0%
!!! TGGTATTCAAAAAATTTTAC+CGG - Chr3:10222947-10222966 MsG0380012055.01.T01:intron 20.0%
!!! TTTCCTTCTTTTTAAATTCA+TGG + Chr3:10224269-10224288 None:intergenic 20.0%
!!! TTTGGTATTTAGTTTATGTT+TGG - Chr3:10220601-10220620 MsG0380012055.01.T01:intron 20.0%
! AACTATACAATCTTGTGTAA+AGG - Chr3:10221330-10221349 MsG0380012055.01.T01:intron 25.0%
! AACTCATTAGTATAGTAATC+TGG - Chr3:10223197-10223216 MsG0380012055.01.T01:intron 25.0%
! AATACCATCTACATATTCTT+GGG + Chr3:10222934-10222953 None:intergenic 25.0%
! AGAAAATCTAACATCATAGA+AGG + Chr3:10221961-10221980 None:intergenic 25.0%
! AGCATGTTAAATAACCAAAT+TGG + Chr3:10221367-10221386 None:intergenic 25.0%
! AGTATCGTTAAAAAAATAGC+AGG + Chr3:10223064-10223083 None:intergenic 25.0%
! ATACAATAAATGAATACGGT+AGG + Chr3:10221717-10221736 None:intergenic 25.0%
! ATACCAAAACAGAGAATATT+GGG + Chr3:10221457-10221476 None:intergenic 25.0%
! ATATTGTTTCCTATCAAACT+TGG + Chr3:10220213-10220232 None:intergenic 25.0%
! ATTACAATGAGAAAAAAGGA+AGG - Chr3:10222855-10222874 MsG0380012055.01.T01:intron 25.0%
! ATTGATACATCTGTACTTAT+AGG - Chr3:10221585-10221604 MsG0380012055.01.T01:intron 25.0%
! CACATTAACCATAATGTTAA+AGG + Chr3:10220960-10220979 None:intergenic 25.0%
! GGTAATATATAACATGTTGT+CGG + Chr3:10223938-10223957 None:intergenic 25.0%
! GTAAAGAAATTGTTTCAATC+AGG - Chr3:10221161-10221180 MsG0380012055.01.T01:intron 25.0%
! TACTATACTAATGAGTTACA+TGG + Chr3:10223194-10223213 None:intergenic 25.0%
! TATACCAAAACAGAGAATAT+TGG + Chr3:10221458-10221477 None:intergenic 25.0%
! TCCTGTTGAAATTGAAAAAA+TGG - Chr3:10224674-10224693 MsG0380012055.01.T01:intron 25.0%
! TCTCCATGAATTTAAAAAGA+AGG - Chr3:10224263-10224282 MsG0380012055.01.T01:intron 25.0%
! TTACAATGAGAAAAAAGGAA+GGG - Chr3:10222856-10222875 MsG0380012055.01.T01:intron 25.0%
!! TAAATTTTCTAAACCTACCA+AGG + Chr3:10221566-10221585 None:intergenic 25.0%
!! TACACAAGATTGTATAGTTT+TGG + Chr3:10221329-10221348 None:intergenic 25.0%
!! TCACATTTTTATCATTAGCT+AGG + Chr3:10223037-10223056 None:intergenic 25.0%
!! TGTAAGCTTAATGTCATTTA+TGG + Chr3:10223633-10223652 None:intergenic 25.0%
!!! ACCATTTTTTCAATTTCAAC+AGG + Chr3:10224678-10224697 None:intergenic 25.0%
!!! ATTGAGTTTGCTGTTAAATT+AGG - Chr3:10220155-10220174 MsG0380012055.01.T01:CDS 25.0%
!!! ATTTGATGGTATTTTTTCAC+AGG - Chr3:10222266-10222285 MsG0380012055.01.T01:intron 25.0%
!!! CAACTTTTCATTTTTCATGA+AGG + Chr3:10223609-10223628 None:intergenic 25.0%
!!! TGTTTGTTTAGTTTTTGGAT+TGG - Chr3:10221486-10221505 MsG0380012055.01.T01:CDS 25.0%
AAGCTATTGCATACTGAAAA+CGG - Chr3:10220386-10220405 MsG0380012055.01.T01:CDS 30.0%
ACCTGTAATGTCTAATTATC+GGG - Chr3:10223817-10223836 MsG0380012055.01.T01:intron 30.0%
ACGTAGAAGATATGAAAAGA+TGG - Chr3:10222986-10223005 MsG0380012055.01.T01:intron 30.0%
AGATATGAAAAGATGGGATT+AGG - Chr3:10222993-10223012 MsG0380012055.01.T01:intron 30.0%
ATAGAAGGCAAATTCCAAAT+TGG + Chr3:10221946-10221965 None:intergenic 30.0%
ATCAATAAAGTTGTTCAGAG+TGG + Chr3:10224627-10224646 None:intergenic 30.0%
CAACACATACACAAATAAAG+GGG - Chr3:10222006-10222025 MsG0380012055.01.T01:intron 30.0%
CAACTTGATTCTTACATGTT+AGG - Chr3:10220642-10220661 MsG0380012055.01.T01:intron 30.0%
CATATTCGATTATCTTGTGT+GGG - Chr3:10221747-10221766 MsG0380012055.01.T01:intron 30.0%
CCAACACATACACAAATAAA+GGG - Chr3:10222005-10222024 MsG0380012055.01.T01:intron 30.0%
CGTAGAAGATATGAAAAGAT+GGG - Chr3:10222987-10223006 MsG0380012055.01.T01:intron 30.0%
CTTAATAGAGTACAGTTCAT+TGG - Chr3:10223419-10223438 MsG0380012055.01.T01:intron 30.0%
GAATACCATCTACATATTCT+TGG + Chr3:10222935-10222954 None:intergenic 30.0%
GACCTGTAATGTCTAATTAT+CGG - Chr3:10223816-10223835 MsG0380012055.01.T01:intron 30.0%
GCTATGTCTTCTGTAAAAAA+TGG - Chr3:10222504-10222523 MsG0380012055.01.T01:intron 30.0%
GCTCATTGAAAAAAATGACT+TGG - Chr3:10224402-10224421 MsG0380012055.01.T01:intron 30.0%
GCTTCAAGTAGAATCAATTA+TGG + Chr3:10220696-10220715 None:intergenic 30.0%
TAAAGTCCAACAACAAACAA+GGG + Chr3:10224176-10224195 None:intergenic 30.0%
TACATCTGTACTTATAGGTT+TGG - Chr3:10221590-10221609 MsG0380012055.01.T01:intron 30.0%
TACCAAAACAGAGAATATTG+GGG + Chr3:10221456-10221475 None:intergenic 30.0%
TACTAATGAGTTACATGGAA+CGG + Chr3:10223189-10223208 None:intergenic 30.0%
TCAAGTAGAATCAATTATGG+AGG + Chr3:10220693-10220712 None:intergenic 30.0%
TCTACTTAACAAGATTCTCT+TGG - Chr3:10224905-10224924 MsG0380012055.01.T01:CDS 30.0%
TGTCAAAACAGATAACAAAC+TGG + Chr3:10221252-10221271 None:intergenic 30.0%
! AGTATAGTAATCTGGTTTGT+AGG - Chr3:10223205-10223224 MsG0380012055.01.T01:intron 30.0%
! GTATAGTAATCTGGTTTGTA+GGG - Chr3:10223206-10223225 MsG0380012055.01.T01:intron 30.0%
! TATCTTCTACGTTTTTCTTC+AGG + Chr3:10222978-10222997 None:intergenic 30.0%
! TTCTCTAGAAATACATTAGC+TGG + Chr3:10223365-10223384 None:intergenic 30.0%
! TTTATCCTGATTTGCCTAAA+GGG - Chr3:10220234-10220253 MsG0380012055.01.T01:intron 30.0%
!! AATTGGATGAGTTTTGTCAA+AGG + Chr3:10221527-10221546 None:intergenic 30.0%
!! TATTTTGAAAATGTCCATCG+AGG - Chr3:10223907-10223926 MsG0380012055.01.T01:intron 30.0%
!! TGAAAAAAATGACTTGGTTC+AGG - Chr3:10224408-10224427 MsG0380012055.01.T01:intron 30.0%
!! TGTAAACTAGAAAGTTGATG+CGG + Chr3:10224496-10224515 None:intergenic 30.0%
!! TTCACAGGTTGATCTAAATA+GGG - Chr3:10222281-10222300 MsG0380012055.01.T01:intron 30.0%
!! TTTCACAGGTTGATCTAAAT+AGG - Chr3:10222280-10222299 MsG0380012055.01.T01:intron 30.0%
!! TTTGGTGTCCTTTAACATTA+TGG - Chr3:10220949-10220968 MsG0380012055.01.T01:intron 30.0%
!! TTTTATCCTGATTTGCCTAA+AGG - Chr3:10220233-10220252 MsG0380012055.01.T01:intron 30.0%
!! TTTTCTTTCTATTGGCCTAA+TGG - Chr3:10221982-10222001 MsG0380012055.01.T01:intron 30.0%
!!! TGATTTTGAAATTTCAAGGC+AGG - Chr3:10222645-10222664 MsG0380012055.01.T01:CDS 30.0%
!!! TTTCTTGTTGTTTTCCTTCT+AGG - Chr3:10222758-10222777 MsG0380012055.01.T01:CDS 30.0%
AAACACCAAAAGAAGCGATT+AGG - Chr3:10221417-10221436 MsG0380012055.01.T01:CDS 35.0%
AACACCAAAAGAAGCGATTA+GGG - Chr3:10221418-10221437 MsG0380012055.01.T01:CDS 35.0%
AATAGTGCACATAGTCAAAC+TGG - Chr3:10224008-10224027 MsG0380012055.01.T01:intron 35.0%
AATATCGCTCATTATCCAGT+TGG + Chr3:10223582-10223601 None:intergenic 35.0%
AATATGCAGCAGAATTACAG+AGG - Chr3:10222367-10222386 MsG0380012055.01.T01:intron 35.0%
ACATACACAAATAAAGGGGA+AGG - Chr3:10222010-10222029 MsG0380012055.01.T01:intron 35.0%
ACTTGCTCTTAATTGCGAAT+TGG - Chr3:10220178-10220197 MsG0380012055.01.T01:CDS 35.0%
AGAATCTTGTTAAGTAGACC+TGG + Chr3:10224903-10224922 None:intergenic 35.0%
ATACACAAATAAAGGGGAAG+GGG - Chr3:10222012-10222031 MsG0380012055.01.T01:intron 35.0%
ATACCTTCATTACCTGCATT+TGG + Chr3:10224863-10224882 None:intergenic 35.0%
ATAGTGCACATAGTCAAACT+GGG - Chr3:10224009-10224028 MsG0380012055.01.T01:intron 35.0%
ATTTACGTTTGTCCAAATGC+AGG - Chr3:10224848-10224867 MsG0380012055.01.T01:CDS 35.0%
CATACACAAATAAAGGGGAA+GGG - Chr3:10222011-10222030 MsG0380012055.01.T01:intron 35.0%
CATCTACATATTCTTGGGAA+AGG + Chr3:10222929-10222948 None:intergenic 35.0%
CGTTTGATTCCAAGTTTGAT+AGG - Chr3:10220201-10220220 MsG0380012055.01.T01:CDS 35.0%
CTTTCCCAAGAATATGTAGA+TGG - Chr3:10222927-10222946 MsG0380012055.01.T01:intron 35.0%
GAAATTACTCTCAGGTTAGT+TGG - Chr3:10220552-10220571 MsG0380012055.01.T01:intron 35.0%
GCATATTCGATTATCTTGTG+TGG - Chr3:10221746-10221765 MsG0380012055.01.T01:intron 35.0%
GCCAACACATACACAAATAA+AGG - Chr3:10222004-10222023 MsG0380012055.01.T01:intron 35.0%
GTAAAGTCCAACAACAAACA+AGG + Chr3:10224177-10224196 None:intergenic 35.0%
GTGCTTCATTTCGAAGAAAT+TGG + Chr3:10221544-10221563 None:intergenic 35.0%
TAGCTGCTAAAATACCTAGA+AGG + Chr3:10222775-10222794 None:intergenic 35.0%
TCAAGAAGATCAGATAGTAC+AGG - Chr3:10222687-10222706 MsG0380012055.01.T01:CDS 35.0%
TCAATAACAATCGCTAACAG+AGG + Chr3:10221091-10221110 None:intergenic 35.0%
TCAATACCATTTCTCATGTC+AGG + Chr3:10222339-10222358 None:intergenic 35.0%
TCAGAAACTATCTCTAGCAA+AGG + Chr3:10222315-10222334 None:intergenic 35.0%
TCTTCCATGATGAGACTATA+TGG - Chr3:10224202-10224221 MsG0380012055.01.T01:intron 35.0%
TGAAAACGGAAATTACTCTC+AGG - Chr3:10220544-10220563 MsG0380012055.01.T01:intron 35.0%
TGATCAATTATTGTTCTGGC+AGG - Chr3:10222576-10222595 MsG0380012055.01.T01:intron 35.0%
TTGATTGCTTCCATTAAAGG+TGG - Chr3:10223671-10223690 MsG0380012055.01.T01:intron 35.0%
TTTGATGCTACACTTGCAAA+AGG - Chr3:10223536-10223555 MsG0380012055.01.T01:intron 35.0%
! AGCGATTGTTATTGACCAAA+GGG - Chr3:10221096-10221115 MsG0380012055.01.T01:intron 35.0%
! ATAAGAGGTTTGGGATTACT+AGG - Chr3:10220339-10220358 MsG0380012055.01.T01:CDS 35.0%
! CCCTTTATTTGTGTATGTGT+TGG + Chr3:10222008-10222027 None:intergenic 35.0%
! GTTGGTTTCTTTCTTCTCAT+TGG - Chr3:10220570-10220589 MsG0380012055.01.T01:intron 35.0%
! TAAGAGGTTTGGGATTACTA+GGG - Chr3:10220340-10220359 MsG0380012055.01.T01:CDS 35.0%
! TAGCGATTGTTATTGACCAA+AGG - Chr3:10221095-10221114 MsG0380012055.01.T01:intron 35.0%
! TAGTTGTGTTTGTTGACCAA+GGG - Chr3:10223772-10223791 MsG0380012055.01.T01:intron 35.0%
! TTAGTTGTGTTTGTTGACCA+AGG - Chr3:10223771-10223790 MsG0380012055.01.T01:intron 35.0%
! TTTATAACAGGTAAAGCACC+TGG + Chr3:10220125-10220144 None:intergenic 35.0%
!! AATGAAGGTATCTAAAGGCA+AGG - Chr3:10224872-10224891 MsG0380012055.01.T01:CDS 35.0%
!! ATGTTTGGTTCCACTTTTAG+AGG - Chr3:10220616-10220635 MsG0380012055.01.T01:intron 35.0%
!! CAGGTAATGAAGGTATCTAA+AGG - Chr3:10224867-10224886 MsG0380012055.01.T01:CDS 35.0%
!! GACAGAACTTTGAAGTATCA+AGG + Chr3:10221123-10221142 None:intergenic 35.0%
!! TCTTTCTTCTCATTGGTTCT+AGG - Chr3:10220577-10220596 MsG0380012055.01.T01:intron 35.0%
!! TGTTTGGTTCCACTTTTAGA+GGG - Chr3:10220617-10220636 MsG0380012055.01.T01:intron 35.0%
!! TTAAAGAAGAAAAGCACCAG+TGG + Chr3:10222088-10222107 None:intergenic 35.0%
!!! AAACTCCAAGGTTTTTTTGC+TGG - Chr3:10224756-10224775 MsG0380012055.01.T01:CDS 35.0%
!!! CAGGTATGAACTTTTAGAAC+TGG - Chr3:10224780-10224799 MsG0380012055.01.T01:CDS 35.0%
!!! TAGGTATTTTAGCAGCTACA+AGG - Chr3:10222777-10222796 MsG0380012055.01.T01:CDS 35.0%
!!! TTCTCATTGGTTCTAGGTTT+TGG - Chr3:10220583-10220602 MsG0380012055.01.T01:intron 35.0%
ACAAACTGGTTAGAGTCAAG+TGG + Chr3:10221238-10221257 None:intergenic 40.0%
ACTATTTGAGCTGTTAGCCA+AGG - Chr3:10224363-10224382 MsG0380012055.01.T01:intron 40.0%
ACTGATGGTTCCACCTTTAA+TGG + Chr3:10223684-10223703 None:intergenic 40.0%
AGAGAATATTGGGGACAGTA+GGG + Chr3:10221447-10221466 None:intergenic 40.0%
AGGAAAGTTGCGAACCAATT+TGG - Chr3:10221350-10221369 MsG0380012055.01.T01:intron 40.0%
AGTGATGATCACTTGTGTAG+TGG - Chr3:10223137-10223156 MsG0380012055.01.T01:intron 40.0%
AGTGGTGCATAACTATACAG+TGG - Chr3:10223745-10223764 MsG0380012055.01.T01:intron 40.0%
ATTAAAGGTGGAACCATCAG+TGG - Chr3:10223683-10223702 MsG0380012055.01.T01:intron 40.0%
CAGGAAGTGGTAACAAAATG+AGG + Chr3:10224594-10224613 None:intergenic 40.0%
CGAACGAGAAATTGCCAATT+TGG - Chr3:10221929-10221948 MsG0380012055.01.T01:intron 40.0%
CGAGATAGTGAACATGTTGT+TGG - Chr3:10223287-10223306 MsG0380012055.01.T01:intron 40.0%
CTATTTGAGCTGTTAGCCAA+GGG - Chr3:10224364-10224383 MsG0380012055.01.T01:intron 40.0%
GATTGCAGATAATCCGAAAC+AGG - Chr3:10224707-10224726 MsG0380012055.01.T01:intron 40.0%
GCCCGATAATTAGACATTAC+AGG + Chr3:10223821-10223840 None:intergenic 40.0%
GCGATGTAAACGTATCAGTA+CGG - Chr3:10222445-10222464 MsG0380012055.01.T01:CDS 40.0%
GTACATATTCTAACCCTACG+AGG - Chr3:10221871-10221890 MsG0380012055.01.T01:intron 40.0%
GTGATGATCACTTGTGTAGT+GGG - Chr3:10223138-10223157 MsG0380012055.01.T01:intron 40.0%
GTGTATCACTATCATCACAC+TGG + Chr3:10223097-10223116 None:intergenic 40.0%
TAACAAAATGAGGTCGAAGG+AGG + Chr3:10224584-10224603 None:intergenic 40.0%
TACACAAATAAAGGGGAAGG+GGG - Chr3:10222013-10222032 MsG0380012055.01.T01:intron 40.0%
TACTAGGGTTCATATGGAAG+AGG - Chr3:10220355-10220374 MsG0380012055.01.T01:CDS 40.0%
TATGGTTAATGTGCCAACGA+AGG - Chr3:10220967-10220986 MsG0380012055.01.T01:intron 40.0%
TCCATGATGAGACTATATGG+CGG - Chr3:10224205-10224224 MsG0380012055.01.T01:intron 40.0%
TCTGACTAAAAGTGAGTCGA+AGG + Chr3:10220814-10220833 None:intergenic 40.0%
TCTTGATGTTGATATTCCCG+TGG - Chr3:10220301-10220320 MsG0380012055.01.T01:intron 40.0%
TCTTGGGAAAGGATTACTGA+TGG + Chr3:10222918-10222937 None:intergenic 40.0%
TGATACCCTTTAGGCAAATC+AGG + Chr3:10220242-10220261 None:intergenic 40.0%
TGCGAAATCTGATACCCTTT+AGG + Chr3:10220251-10220270 None:intergenic 40.0%
TGGGATTACTAGGGTTCATA+TGG - Chr3:10220349-10220368 MsG0380012055.01.T01:CDS 40.0%
TGGTAACAAAATGAGGTCGA+AGG + Chr3:10224587-10224606 None:intergenic 40.0%
TGGTTAACCAACGTCAGTTA+AGG + Chr3:10221218-10221237 None:intergenic 40.0%
TGTCCAAATGCAGGTAATGA+AGG - Chr3:10224857-10224876 MsG0380012055.01.T01:CDS 40.0%
TTCATATGGAAGAGGATGCT+GGG - Chr3:10220363-10220382 MsG0380012055.01.T01:CDS 40.0%
TTCTCGTTCGTGAAATCTAG+AGG + Chr3:10221919-10221938 None:intergenic 40.0%
! ACAGAGGTTGGTTAGGTATT+TGG - Chr3:10222383-10222402 MsG0380012055.01.T01:intron 40.0%
! AGGTTGATCTAAATAGGGCA+GGG - Chr3:10222286-10222305 MsG0380012055.01.T01:intron 40.0%
! CAGAATTACAGAGGTTGGTT+AGG - Chr3:10222376-10222395 MsG0380012055.01.T01:intron 40.0%
! CAGAGGTTGGTTAGGTATTT+GGG - Chr3:10222384-10222403 MsG0380012055.01.T01:intron 40.0%
! CTAGATTTTGTCTCCTCGTA+GGG + Chr3:10221887-10221906 None:intergenic 40.0%
! GAAAGGAGGTATGTTTGCTT+CGG - Chr3:10223714-10223733 MsG0380012055.01.T01:intron 40.0%
! GCGATTGTTATTGACCAAAG+GGG - Chr3:10221097-10221116 MsG0380012055.01.T01:intron 40.0%
! GTCCCCAATATTCTCTGTTT+TGG - Chr3:10221451-10221470 MsG0380012055.01.T01:CDS 40.0%
! TTCTTCGAAATGAAGCACCT+TGG - Chr3:10221546-10221565 MsG0380012055.01.T01:CDS 40.0%
! TTGTGTATGTGTTGGCCATT+AGG + Chr3:10222000-10222019 None:intergenic 40.0%
!! CGAAGGGAGTACTATTTCTT+AGG - Chr3:10224047-10224066 MsG0380012055.01.T01:intron 40.0%
!! GCGTTGATTGCTTCCATTAA+AGG - Chr3:10223668-10223687 MsG0380012055.01.T01:intron 40.0%
!! GTTCTTCCCTTGTTTGTTGT+TGG - Chr3:10224167-10224186 MsG0380012055.01.T01:intron 40.0%
!! GTTTGGTTCCACTTTTAGAG+GGG - Chr3:10220618-10220637 MsG0380012055.01.T01:intron 40.0%
!!! GCTTCTTTTGGTGTTTTCTC+TGG + Chr3:10221413-10221432 None:intergenic 40.0%
AAATAAAGGGGAAGGGGGAA+AGG - Chr3:10222018-10222037 MsG0380012055.01.T01:intron 45.0%
AAGAAACCCAGAACTCGCAA+TGG + Chr3:10220285-10220304 None:intergenic 45.0%
AAGGGAAGAACTGTTGAGAG+AGG + Chr3:10224158-10224177 None:intergenic 45.0%
AATAAAGGGGAAGGGGGAAA+GGG - Chr3:10222019-10222038 MsG0380012055.01.T01:intron 45.0%
ACCGCCATATAGTCTCATCA+TGG + Chr3:10224209-10224228 None:intergenic 45.0%
AGAAACCCAGAACTCGCAAT+GGG + Chr3:10220284-10220303 None:intergenic 45.0%
AGCAATGGCAACATGCAAGA+AGG - Chr3:10222411-10222430 MsG0380012055.01.T01:CDS 45.0%
AGGAGGATTTCAACAGGCAT+TGG + Chr3:10224567-10224586 None:intergenic 45.0%
AGGATTACTGATGGAAGGTC+TGG + Chr3:10222909-10222928 None:intergenic 45.0%
AGGGAAGAACTGTTGAGAGA+GGG + Chr3:10224157-10224176 None:intergenic 45.0%
AGGTATTTGGGAGTGAGCAA+TGG - Chr3:10222396-10222415 MsG0380012055.01.T01:CDS 45.0%
AGTACAGGAAACTCGACTCT+GGG - Chr3:10222702-10222721 MsG0380012055.01.T01:CDS 45.0%
ATATTCCCGTGGAGTTTGGT+GGG - Chr3:10220312-10220331 MsG0380012055.01.T01:intron 45.0%
ATCAACGCAGCTAACTCTTC+AGG + Chr3:10223656-10223675 None:intergenic 45.0%
ATGTTCCCATTGCGAGTTCT+GGG - Chr3:10220276-10220295 MsG0380012055.01.T01:intron 45.0%
CAAACTGGGTCATTCACTGT+GGG - Chr3:10224023-10224042 MsG0380012055.01.T01:intron 45.0%
CAGAGAATATTGGGGACAGT+AGG + Chr3:10221448-10221467 None:intergenic 45.0%
CATCAGTGGAAAGATCGGAA+AGG - Chr3:10223697-10223716 MsG0380012055.01.T01:intron 45.0%
CCAAACTTTGACTGCCCAAT+GGG + Chr3:10222471-10222490 None:intergenic 45.0%
CCATTGGGCAGTCAAAGTTT+GGG - Chr3:10222469-10222488 MsG0380012055.01.T01:CDS 45.0%
CCTACGAGGAGACAAAATCT+AGG - Chr3:10221885-10221904 MsG0380012055.01.T01:intron 45.0%
CCTGACCAGCAAAAAAACCT+TGG + Chr3:10224764-10224783 None:intergenic 45.0%
CGGTATTGCTCAACCTGTTT+CGG + Chr3:10224723-10224742 None:intergenic 45.0%
CTTTCCGATCTTTCCACTGA+TGG + Chr3:10223699-10223718 None:intergenic 45.0%
GATTCGACCTTAACTGACGT+TGG - Chr3:10221208-10221227 MsG0380012055.01.T01:intron 45.0%
GGAACCATCAGTGGAAAGAT+CGG - Chr3:10223692-10223711 MsG0380012055.01.T01:intron 45.0%
GGGAAAGGATTACTGATGGA+AGG + Chr3:10222914-10222933 None:intergenic 45.0%
GGTTGATCTAAATAGGGCAG+GGG - Chr3:10222287-10222306 MsG0380012055.01.T01:intron 45.0%
GTTAATGTGCCAACGAAGGT+TGG - Chr3:10220971-10220990 MsG0380012055.01.T01:intron 45.0%
GTTCATATGGAAGAGGATGC+TGG - Chr3:10220362-10220381 MsG0380012055.01.T01:CDS 45.0%
GTTGATATTCCCGTGGAGTT+TGG - Chr3:10220308-10220327 MsG0380012055.01.T01:intron 45.0%
TAGTACAGGAAACTCGACTC+TGG - Chr3:10222701-10222720 MsG0380012055.01.T01:CDS 45.0%
TCAAACTGGGTCATTCACTG+TGG - Chr3:10224022-10224041 MsG0380012055.01.T01:intron 45.0%
TCTAAAGGCAAGGCAAATCC+AGG - Chr3:10224882-10224901 MsG0380012055.01.T01:CDS 45.0%
TCTGAGCCTGACATGAGAAA+TGG - Chr3:10222330-10222349 MsG0380012055.01.T01:intron 45.0%
TGCAGCAGAATTACAGAGGT+TGG - Chr3:10222371-10222390 MsG0380012055.01.T01:intron 45.0%
TTTGCTTCGGCATTAACGAG+TGG - Chr3:10223727-10223746 MsG0380012055.01.T01:intron 45.0%
! AAACAGGTTGAGCAATACCG+AGG - Chr3:10224723-10224742 MsG0380012055.01.T01:intron 45.0%
! ATGTTGTTGGAGCGTTTCTG+TGG - Chr3:10223300-10223319 MsG0380012055.01.T01:intron 45.0%
! CAAGTTGACCCCTCTAAAAG+TGG + Chr3:10220629-10220648 None:intergenic 45.0%
! CCTAGATTTTGTCTCCTCGT+AGG + Chr3:10221888-10221907 None:intergenic 45.0%
! CGTTTTTCTTCAGGAAGCTC+CGG + Chr3:10222969-10222988 None:intergenic 45.0%
! GCAGTCAAAGTTTGGGACAA+AGG - Chr3:10222476-10222495 MsG0380012055.01.T01:CDS 45.0%
! GCTTCCCTAATCGCTTCTTT+TGG + Chr3:10221425-10221444 None:intergenic 45.0%
! TCGAAATGAAGCACCTTGGT+AGG - Chr3:10221550-10221569 MsG0380012055.01.T01:CDS 45.0%
! TGGAGCGTTTCTGTGGATTT+AGG - Chr3:10223307-10223326 MsG0380012055.01.T01:intron 45.0%
! TTGAAGTATCAAGGCCCCTT+TGG + Chr3:10221114-10221133 None:intergenic 45.0%
!! CAGGTTGATCTAAATAGGGC+AGG - Chr3:10222285-10222304 MsG0380012055.01.T01:intron 45.0%
!!! CCAAGGTTTTTTTGCTGGTC+AGG - Chr3:10224761-10224780 MsG0380012055.01.T01:CDS 45.0%
!! ATATATTAGTAAAAAATATA+TGG - Chr3:10223968-10223987 MsG0380012055.01.T01:intron 5.0%
!! TAGATAATTAAAAATATTAA+AGG + Chr3:10223864-10223883 None:intergenic 5.0%
AACGTATCAGTACGGCCCAT+TGG - Chr3:10222453-10222472 MsG0380012055.01.T01:CDS 50.0%
ACGTATCAGTACGGCCCATT+GGG - Chr3:10222454-10222473 MsG0380012055.01.T01:CDS 50.0%
ATGCAAAGCTGGTTGCCAAC+TGG - Chr3:10223564-10223583 MsG0380012055.01.T01:intron 50.0%
CAGGTGCAACTTCACAGTCA+AGG - Chr3:10222664-10222683 MsG0380012055.01.T01:CDS 50.0%
CAGTGGAAAGATCGGAAAGG+AGG - Chr3:10223700-10223719 MsG0380012055.01.T01:intron 50.0%
CCCAAACTTTGACTGCCCAA+TGG + Chr3:10222472-10222491 None:intergenic 50.0%
CCCATTGGGCAGTCAAAGTT+TGG - Chr3:10222468-10222487 MsG0380012055.01.T01:CDS 50.0%
GATATTCCCGTGGAGTTTGG+TGG - Chr3:10220311-10220330 MsG0380012055.01.T01:intron 50.0%
GATGAGACTATATGGCGGTC+AGG - Chr3:10224210-10224229 MsG0380012055.01.T01:intron 50.0%
GATGTTCCCATTGCGAGTTC+TGG - Chr3:10220275-10220294 MsG0380012055.01.T01:intron 50.0%
GGAGGCAAAACGAAACTCCA+AGG - Chr3:10224744-10224763 MsG0380012055.01.T01:intron 50.0%
GGTCGAAGGAGGATTTCAAC+AGG + Chr3:10224573-10224592 None:intergenic 50.0%
GTCATTCACTGTGGGACGAA+GGG - Chr3:10224031-10224050 MsG0380012055.01.T01:intron 50.0%
GTTGGCAACCAGCTTTGCAT+CGG + Chr3:10223564-10223583 None:intergenic 50.0%
TCAGAGTGGAGTTTGCATGC+AGG + Chr3:10224613-10224632 None:intergenic 50.0%
TGGAGTTTGCATGCAGGAAG+TGG + Chr3:10224607-10224626 None:intergenic 50.0%
TGTTGTCGGAATTGCCTCGA+TGG + Chr3:10223924-10223943 None:intergenic 50.0%
TTTGAGCTGTTAGCCAAGGG+TGG - Chr3:10224367-10224386 MsG0380012055.01.T01:intron 50.0%
! ACTGATGGAAGGTCTGGTTC+TGG + Chr3:10222903-10222922 None:intergenic 50.0%
! GAAACTCGACTCTGGGAAGA+AGG - Chr3:10222709-10222728 MsG0380012055.01.T01:CDS 50.0%
! GAAGGTTGGCTCAGTTGGTA+AGG - Chr3:10220985-10221004 MsG0380012055.01.T01:intron 50.0%
! GGAGTTTCGTTTTGCCTCCT+CGG + Chr3:10224743-10224762 None:intergenic 50.0%
! TATTCCCGTGGAGTTTGGTG+GGG - Chr3:10220313-10220332 MsG0380012055.01.T01:CDS 50.0%
!! AAAAGGTGCCGATGCAAAGC+TGG - Chr3:10223553-10223572 MsG0380012055.01.T01:intron 50.0%
AGCGTGAGGGTCTCTTTGGT+GGG - Chr3:10221052-10221071 MsG0380012055.01.T01:intron 55.0%
CACACACACACTCATGCCAC+TGG - Chr3:10222069-10222088 MsG0380012055.01.T01:CDS 55.0%
CCAACTGAGCCAACCTTCGT+TGG + Chr3:10220983-10221002 None:intergenic 55.0%
CTCCTTGACACTTCCACCCT+TGG + Chr3:10224383-10224402 None:intergenic 55.0%
GGTCATTCACTGTGGGACGA+AGG - Chr3:10224030-10224049 MsG0380012055.01.T01:intron 55.0%
! ACTCTGGGAAGAAGGCTCTC+AGG - Chr3:10222717-10222736 MsG0380012055.01.T01:CDS 55.0%
! AGTTTGGTGGGGGGCATAAG+AGG - Chr3:10220324-10220343 MsG0380012055.01.T01:CDS 55.0%
! ATTCCCGTGGAGTTTGGTGG+GGG - Chr3:10220314-10220333 MsG0380012055.01.T01:CDS 55.0%
! CAGGTTGAGCAATACCGAGG+AGG - Chr3:10224726-10224745 MsG0380012055.01.T01:intron 55.0%
! CCAACGAAGGTTGGCTCAGT+TGG - Chr3:10220980-10220999 MsG0380012055.01.T01:intron 55.0%
! GTGGGGGGCATAAGAGGTTT+GGG - Chr3:10220330-10220349 MsG0380012055.01.T01:CDS 55.0%
!! AGCCAAGGGTGGAAGTGTCA+AGG - Chr3:10224378-10224397 MsG0380012055.01.T01:intron 55.0%
AACTCCCACTGCCAGCGTGA+GGG - Chr3:10221039-10221058 MsG0380012055.01.T01:intron 60.0%
ATGCCCCCCACCAAACTCCA+CGG + Chr3:10220321-10220340 None:intergenic 60.0%
CACCAAAGAGACCCTCACGC+TGG + Chr3:10221053-10221072 None:intergenic 60.0%
CAGCGTGAGGGTCTCTTTGG+TGG - Chr3:10221051-10221070 MsG0380012055.01.T01:intron 60.0%
TGCCAGCGTGAGGGTCTCTT+TGG - Chr3:10221048-10221067 MsG0380012055.01.T01:intron 60.0%
! GGTGGGGGGCATAAGAGGTT+TGG - Chr3:10220329-10220348 MsG0380012055.01.T01:CDS 60.0%
! TTCCCGTGGAGTTTGGTGGG+GGG - Chr3:10220315-10220334 MsG0380012055.01.T01:CDS 60.0%
!! GAAGGGGGAAAGGGTGTCGT+GGG - Chr3:10222028-10222047 MsG0380012055.01.T01:intron 60.0%
AGAGACCCTCACGCTGGCAG+TGG + Chr3:10221047-10221066 None:intergenic 65.0%
CAACTCCCACTGCCAGCGTG+AGG - Chr3:10221038-10221057 MsG0380012055.01.T01:intron 65.0%
GAGACCCTCACGCTGGCAGT+GGG + Chr3:10221046-10221065 None:intergenic 65.0%
TGCCCCCCACCAAACTCCAC+GGG + Chr3:10220320-10220339 None:intergenic 65.0%
!! GGAAGGGGGAAAGGGTGTCG+TGG - Chr3:10222027-10222046 MsG0380012055.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 10220113 10224982 10220113 ID=MsG0380012055.01;Name=MsG0380012055.01
Chr3 mRNA 10220113 10224982 10220113 ID=MsG0380012055.01.T01;Parent=MsG0380012055.01;Name=MsG0380012055.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0.75|0.66|1|1|1|9|32|448
Chr3 exon 10220113 10220225 10220113 ID=MsG0380012055.01.T01:exon:1629;Parent=MsG0380012055.01.T01
Chr3 exon 10220313 10220429 10220313 ID=MsG0380012055.01.T01:exon:1628;Parent=MsG0380012055.01.T01
Chr3 exon 10220666 10220734 10220666 ID=MsG0380012055.01.T01:exon:1627;Parent=MsG0380012055.01.T01
Chr3 exon 10221374 10221571 10221374 ID=MsG0380012055.01.T01:exon:1626;Parent=MsG0380012055.01.T01
Chr3 exon 10222043 10222246 10222043 ID=MsG0380012055.01.T01:exon:1625;Parent=MsG0380012055.01.T01
Chr3 exon 10222393 10222497 10222393 ID=MsG0380012055.01.T01:exon:1624;Parent=MsG0380012055.01.T01
Chr3 exon 10222598 10222807 10222598 ID=MsG0380012055.01.T01:exon:1623;Parent=MsG0380012055.01.T01
Chr3 exon 10224530 10224659 10224530 ID=MsG0380012055.01.T01:exon:1622;Parent=MsG0380012055.01.T01
Chr3 exon 10224750 10224982 10224750 ID=MsG0380012055.01.T01:exon:1621;Parent=MsG0380012055.01.T01
Chr3 CDS 10224750 10224982 10224750 ID=MsG0380012055.01.T01:cds;Parent=MsG0380012055.01.T01
Chr3 CDS 10224530 10224659 10224530 ID=MsG0380012055.01.T01:cds;Parent=MsG0380012055.01.T01
Chr3 CDS 10222598 10222807 10222598 ID=MsG0380012055.01.T01:cds;Parent=MsG0380012055.01.T01
Chr3 CDS 10222393 10222497 10222393 ID=MsG0380012055.01.T01:cds;Parent=MsG0380012055.01.T01
Chr3 CDS 10222043 10222246 10222043 ID=MsG0380012055.01.T01:cds;Parent=MsG0380012055.01.T01
Chr3 CDS 10221374 10221571 10221374 ID=MsG0380012055.01.T01:cds;Parent=MsG0380012055.01.T01
Chr3 CDS 10220666 10220734 10220666 ID=MsG0380012055.01.T01:cds;Parent=MsG0380012055.01.T01
Chr3 CDS 10220313 10220429 10220313 ID=MsG0380012055.01.T01:cds;Parent=MsG0380012055.01.T01
Chr3 CDS 10220145 10220225 10220145 ID=MsG0380012055.01.T01:cds;Parent=MsG0380012055.01.T01
Chr3 three_prime_UTR 10220113 10220144 10220113 ID=MsG0380012055.01.T01:three_prime_utr;Parent=MsG0380012055.01.T01
Gene Sequence

>MsG0380012055.01.T01

ATGGGGTTACCAGGTGCTTTACCTGTTATAAACAATAAGGTTATTGAGTTTGCTGTTAAATTAGGACTTGCTCTTAATTGCGAATTGGCGTTTGATTCCAAGTTTGATAGGAAACAATATTTTTATCCTGATTTGCCTAAAGGGTATCAGATTTCGCAATTTGATGTTCCCATTGCGAGTTCTGGGTTTCTTGATGTTGATATTCCCGTGGAGTTTGGTGGGGGGCATAAGAGTTCTGGGTTTCTTGATGTTGATATTCCCGTGGAGTTTGGTGGGGGGCATAAGAGGTTTGGGATTACTAGGGTTCATATGGAAGAGGATGCTGGGAAGCTATTGCATACTGAAAACGGAAATTACTCTCAGGTTGATCTAAATAGGGCAGGGGTACCTTTGCTAGAGATAGTTTCTGAGCCTGACATGAGAAATGGTATTGAAGCAGCAGAATATGCAGCAGAATTACAGAGGTTGGTTAGGTATTTGGGAGTGAGCAATGGCAACATGCAAGAAGGTTCTCTTCGTTGCGATGTAAACGTATCAGTACGGCCCATTGGGCAGTCAAAGTTTGGGACAAAGGTTGAAGTGAAAAATTTGAACTCATTTGCATCAATGAGCAGAGCTATTGATTTTGAAATTTCAAGGCAGGTGCAACTTCACAGTCAAGGTCAAGAAGATCAGATAAGAACTATTACAATGAGAAAAAAGGAAGGGCTTGCTGATTATCGATATTTTCCAGAACCAGACCTTCCATCAGTAATCCTTTCCCAAGAATATGTAGATGGTATTCAAAAAATTTTACCGGAGCTTCCTGAAGAAAAACGTAGAAGATATGAAAAGATGGGATTAGGCATGCAAGATGTTCTTTTCCTAGCTAATGATAAAAATATTGCAGAATTTTTTGATGCTACACTTGCAAAAGGTGCCGATGCAAAGCTGGTTGCCAACTGGATAATGAGCGATATTGCAGCCTTCATGAAAAATGAAAAGTTGACCATAAATGACATTAAGCTTACACCTGAAGAGTTAGCTGCGTTGATTGCTTCCATTAAAGGTGGAACCATCAGTGGAAAGATCGGAAAGGAGATACTATTTGAGCTGTTAGCCAAGGGTGGAAGTGTCAAGGAGCTCATTGAAAAAAATGACTTGGTTCAGATAGCAGATCCTGTTGAAATTGAAAAAATGGTTGACAAAGTGATTGCAGATAATCCGAAACAGGTTGAGCAATACCGAGGAGGCAAAACGAAACTCCAAGGTTTTTTTGCTGGTCAGGTAATGAAGGTATCTAAAGGCAAGGCAAATCCAGGTCTACTTAACAAGATTCTCTTGGAGAAATTGAATTCAAAAAGCTGA
Protein sequence

>MsG0380012055.01.T01

MGLPGALPVINNKVIEFAVKLGLALNCELAFDSKFDRKQYFYPDLPKGYQISQFDVPIASSGFLDVDIPVEFGGGHKSSGFLDVDIPVEFGGGHKRFGITRVHMEEDAGKLLHTENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSKFGTKVEVKNLNSFASMSRAIDFEISRQVQLHSQGQEDQIRTITMRKKEGLADYRYFPEPDLPSVILSQEYVDGIQKILPELPEEKRRRYEKMGLGMQDVLFLANDKNIAEFFDATLAKGADAKLVANWIMSDIAAFMKNEKLTINDIKLTPEELAALIASIKGGTISGKIGKEILFELLAKGGSVKELIEKNDLVQIADPVEIEKMVDKVIADNPKQVEQYRGGKTKLQGFFAGQVMKVSKGKANPGLLNKILLEKLNSKS*