AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013084.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013084.01.T01 MTR_3g037560 97.713 481 11 0 54 534 60 540 0.0 985
MsG0380013084.01.T01 MTR_4g108780 81.781 483 85 1 50 529 91 573 0.0 836
MsG0380013084.01.T01 MTR_1g090430 49.795 488 225 5 50 529 11 486 8.26e-167 482
MsG0380013084.01.T01 MTR_8g099865 50.851 470 220 4 67 530 120 584 3.34e-166 484
MsG0380013084.01.T01 MTR_2g020730 44.726 474 242 8 66 528 111 575 4.01e-136 407
MsG0380013084.01.T01 MTR_4g007220 43.058 497 259 9 43 529 115 597 6.67e-133 399
MsG0380013084.01.T01 MTR_4g007360 31.008 258 136 8 23 279 98 314 5.18e-26 108
MsG0380013084.01.T01 MTR_7g005890 37.037 135 61 3 290 422 4 116 2.78e-16 75.5
MsG0380013084.01.T01 MTR_4g007380 41.818 110 48 3 379 488 9 102 3.14e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013084.01.T01 AT2G03220 68.534 464 143 1 67 527 95 558 0.0 673
MsG0380013084.01.T01 AT2G03210 60.324 494 179 6 52 529 77 569 0.0 621
MsG0380013084.01.T01 AT2G03210 59.960 497 179 6 52 529 43 538 0.0 620
MsG0380013084.01.T01 AT2G03210 59.960 497 179 6 52 529 77 572 0.0 620
MsG0380013084.01.T01 AT1G14100 56.442 489 193 7 56 530 34 516 0.0 550
MsG0380013084.01.T01 AT1G14080 53.498 486 212 5 56 529 53 536 0.0 535
MsG0380013084.01.T01 AT2G15390 51.867 482 220 6 59 529 22 502 2.69e-176 506
MsG0380013084.01.T01 AT2G15350 52.621 477 215 7 63 529 38 513 3.11e-176 507
MsG0380013084.01.T01 AT2G15390 51.767 481 220 6 59 528 54 533 5.44e-176 507
MsG0380013084.01.T01 AT1G14110 51.660 482 181 6 54 528 33 469 7.21e-169 486
MsG0380013084.01.T01 AT2G15370 50.947 475 224 6 63 528 57 531 3.21e-168 487
MsG0380013084.01.T01 AT1G74420 51.416 459 197 10 51 500 83 524 1.02e-156 457
MsG0380013084.01.T01 AT1G74420 50.424 472 208 10 38 500 66 520 2.59e-156 456
MsG0380013084.01.T01 AT1G74420 51.416 459 197 10 51 500 121 562 6.81e-156 457
MsG0380013084.01.T01 AT1G74420 50.424 472 208 10 38 500 104 558 2.64e-155 455

Find 138 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGAAATAACCAGAGTTTA+AGG 0.121631 3:-30041788 None:intergenic
TGGATTTCATTTAGCGGTTT+AGG 0.197340 3:+30041064 MsG0380013084.01.T01:CDS
AGCAGGTATAATTCAGTTAA+AGG 0.256109 3:+30040884 MsG0380013084.01.T01:CDS
CCTCACAAATCGTGTTCTTT+TGG 0.256519 3:+30041129 MsG0380013084.01.T01:CDS
ATGTGTTGGGCCGGCCCTGC+TGG 0.256632 3:+30038051 MsG0380013084.01.T01:CDS
CCACCAAGTAGTTTATCTTT+TGG 0.261850 3:-30040824 None:intergenic
TGGAAAACTTTGTCCTTGTT+TGG 0.264766 3:-30041502 None:intergenic
TTATTGTAGGATTCGGTATA+AGG 0.276356 3:-30040980 None:intergenic
TTCACCCTACAAACAAAGTT+TGG 0.276712 3:+30041545 MsG0380013084.01.T01:CDS
GGGCCGGCCCTGCTGGGATA+TGG 0.282716 3:+30038058 MsG0380013084.01.T01:CDS
ATCTTCGTAATCTTGAAATT+AGG 0.294673 3:-30040931 None:intergenic
ATATTGAGTGCATGGTATAT+TGG 0.300568 3:+30042331 MsG0380013084.01.T01:three_prime_UTR
GGATTTCATTTAGCGGTTTA+GGG 0.303332 3:+30041065 MsG0380013084.01.T01:CDS
AATTCAGTTAAAGGACTATC+AGG 0.306453 3:+30040893 MsG0380013084.01.T01:CDS
AATATACCATGCACTCAATA+TGG 0.316147 3:-30042329 None:intergenic
GATCTTAGCTTGTACTTTGA+AGG 0.325331 3:+30041681 MsG0380013084.01.T01:CDS
GGATATGAGTTGGGGTCTTA+AGG 0.326106 3:+30042185 MsG0380013084.01.T01:CDS
ACAGTAAAAGATCTCAATTC+TGG 0.327111 3:+30041004 MsG0380013084.01.T01:CDS
AGTCTGGGGACTCACTTAAA+TGG 0.332705 3:-30041027 None:intergenic
GACAAGAAGCATGATAATAT+TGG 0.332745 3:+30041724 MsG0380013084.01.T01:CDS
TATTGAGTGCATGGTATATT+GGG 0.338849 3:+30042332 MsG0380013084.01.T01:three_prime_UTR
CATTTAGCGGTTTAGGGAAC+AGG 0.347183 3:+30041071 MsG0380013084.01.T01:CDS
TCACCCTACAAACAAAGTTT+GGG 0.356509 3:+30041546 MsG0380013084.01.T01:CDS
AATCCCCAAACTTTGTTTGT+AGG 0.359650 3:-30041550 None:intergenic
TTCTTCTGTCTACCTTCATT+TGG 0.375337 3:+30041324 MsG0380013084.01.T01:CDS
TTTAGTGTGGCGTATGTGTC+GGG 0.378018 3:+30038110 MsG0380013084.01.T01:CDS
GGTTGACCCTGGAGTCGATA+TGG 0.378603 3:+30041150 MsG0380013084.01.T01:CDS
AAGAGTCGGCATCCAGATTA+GGG 0.381150 3:+30041615 MsG0380013084.01.T01:CDS
AAAGAGTCGGCATCCAGATT+AGG 0.381207 3:+30041614 MsG0380013084.01.T01:CDS
GGCTACGTGGCACAGGGGCT+CGG 0.382761 3:+30041991 MsG0380013084.01.T01:CDS
TGATCAAACACGTGTTGAAA+TGG 0.395213 3:-30041658 None:intergenic
TCAGGAGCAGTTTCGTTCTC+AGG 0.396736 3:-30042042 None:intergenic
CAAACTACGTACTTACAGTC+TGG 0.400090 3:-30041043 None:intergenic
TCCTCCTTTCTATGATTGTA+AGG 0.401474 3:+30042110 MsG0380013084.01.T01:CDS
CAGACTGTAAGTACGTAGTT+TGG 0.407993 3:+30041044 MsG0380013084.01.T01:CDS
ACAAATACCTGCCTAAGAAA+TGG 0.409190 3:-30041522 None:intergenic
TCGTGTCGAAAACCCTAATC+TGG 0.411005 3:-30041627 None:intergenic
GGGAGAAACCAGGAGACATC+TGG 0.412994 3:-30041196 None:intergenic
TACTTTCGGCTACGTGGCAC+AGG 0.414600 3:+30041984 MsG0380013084.01.T01:CDS
CACACTAAATTCTTGACCTT+CGG 0.428709 3:-30038096 None:intergenic
TGACTGTTGAGAGGGAAATC+AGG 0.431783 3:-30041220 None:intergenic
CTTGGTGGACTTCTAGCATC+TGG 0.432274 3:+30040839 MsG0380013084.01.T01:CDS
GGCTCGGAGGTTTGAAACCT+TGG 0.432875 3:+30042007 MsG0380013084.01.T01:CDS
TCATGCTTCTTGTCAACATC+AGG 0.434329 3:-30041715 None:intergenic
ACTAGCTCATGGTCTACTTT+CGG 0.435497 3:+30041970 MsG0380013084.01.T01:CDS
CCTTGAGCCTCAATATGTGT+TGG 0.437060 3:+30038037 None:intergenic
ACATCAATATCAATATCAAT+AGG 0.439290 3:-30042367 None:intergenic
ATCCCCAAACTTTGTTTGTA+GGG 0.440499 3:-30041549 None:intergenic
CAGTTTGTTGATATCCCTCA+TGG 0.442703 3:-30041879 None:intergenic
ATGCACTCAATATGGAGTTA+TGG 0.453328 3:-30042321 None:intergenic
ACATTGTGAGGATATGAGTT+GGG 0.455716 3:+30042176 MsG0380013084.01.T01:CDS
AAAAGTAAGAGACATGTATT+GGG 0.462487 3:+30041810 MsG0380013084.01.T01:CDS
GCACGTCGACAAGGAGGATC+AGG 0.467846 3:-30042060 None:intergenic
AATTTCTGCAGAAAGTTCCT+TGG 0.468138 3:+30041398 MsG0380013084.01.T01:CDS
TAGTTATTGAAGTTATGAAT+TGG 0.473063 3:+30042227 MsG0380013084.01.T01:exon
CTTGAGCCTCAATATGTGTT+GGG 0.476850 3:+30038038 None:intergenic
CGTAATCTTGAAATTAGGTA+AGG 0.486955 3:-30040926 None:intergenic
AACCGATTCCAGATGTCTCC+TGG 0.488031 3:+30041188 MsG0380013084.01.T01:CDS
TTGTCGACGTGCAATGTCAA+TGG 0.493385 3:+30042071 MsG0380013084.01.T01:CDS
CATAATCATGCGCCAAATGA+AGG 0.495010 3:-30041336 None:intergenic
TTGAGCTTCCATATCCCAGC+AGG 0.497861 3:-30038066 None:intergenic
GAAATCAGGAGGGAGAAACC+AGG 0.499580 3:-30041206 None:intergenic
GTAGACAGAAGAAGGTACTT+TGG 0.501837 3:-30041314 None:intergenic
CTTGAAATTAGGTAAGGAGA+TGG 0.503384 3:-30040920 None:intergenic
TGTTGATATCCCTCATGGCT+TGG 0.503548 3:-30041874 None:intergenic
TGAATTATACCTGCTGAGAC+AGG 0.508929 3:-30040876 None:intergenic
AGCCTCAATATGTGTTGGGC+CGG 0.509007 3:+30038042 None:intergenic
CTTCCATATCCCAGCAGGGC+CGG 0.510428 3:-30038061 None:intergenic
TCAGGTTTGTATAGTATCCA+AGG 0.511855 3:-30042024 None:intergenic
GACATTGTGAGGATATGAGT+TGG 0.512210 3:+30042175 MsG0380013084.01.T01:CDS
TGGGAATATCCAACTGTGAC+CGG 0.515749 3:+30041829 MsG0380013084.01.T01:CDS
TGTGTTGGGCCGGCCCTGCT+GGG 0.521535 3:+30038052 MsG0380013084.01.T01:CDS
ACTGTGACCGGAGAAGTTAT+TGG 0.523131 3:+30041841 MsG0380013084.01.T01:CDS
ATGATAGATCCTGTCTCAGC+AGG 0.523750 3:+30040867 MsG0380013084.01.T01:CDS
GTAAACACCAATAACTTCTC+CGG 0.525651 3:-30041848 None:intergenic
TGGGAACTCTTTAGAATCAG+AGG 0.528580 3:-30040804 None:intergenic
AGATCGACCATATCGACTCC+AGG 0.528983 3:-30041157 None:intergenic
CTAATGACATCCTTAAACTC+TGG 0.530388 3:+30041778 MsG0380013084.01.T01:CDS
ATAAAGAAATGCAGAAGCTA+AGG 0.532656 3:-30041101 None:intergenic
TTCCCAAAAGATAAACTACT+TGG 0.532835 3:+30040821 MsG0380013084.01.T01:CDS
AACCAGGAGACATCTGGAAT+CGG 0.534399 3:-30041190 None:intergenic
AAACTACGTACTTACAGTCT+GGG 0.536165 3:-30041042 None:intergenic
TCCTAAAGCAAAATAAATAG+TGG 0.538476 3:-30042253 None:intergenic
ATTTAGTGTGGCGTATGTGT+CGG 0.539376 3:+30038109 MsG0380013084.01.T01:CDS
CAGAAATCTGATCACTGTCA+TGG 0.540196 3:+30041259 MsG0380013084.01.T01:CDS
CCAAAAGATAAACTACTTGG+TGG 0.541266 3:+30040824 MsG0380013084.01.T01:CDS
TTAGCCTTACAATCATAGAA+AGG 0.543257 3:-30042114 None:intergenic
AAATGAAGGTAGACAGAAGA+AGG 0.544298 3:-30041322 None:intergenic
AAACACGTGTTGAAATGGAC+CGG 0.554188 3:-30041653 None:intergenic
GTAGTTTGGATTTCATTTAG+CGG 0.558001 3:+30041058 MsG0380013084.01.T01:CDS
ATTGATATTGATATTGATGT+TGG 0.558022 3:+30042370 MsG0380013084.01.T01:three_prime_UTR
GATATCCCTCATGGCTTGGT+TGG 0.563961 3:-30041870 None:intergenic
CAGTAATCTCTTTCCAAACA+AGG 0.565980 3:+30041489 MsG0380013084.01.T01:CDS
ATAACTTCTCCGGTCACAGT+TGG 0.569629 3:-30041838 None:intergenic
TCCTCATGTAAGACATTGTG+AGG 0.572556 3:+30042164 MsG0380013084.01.T01:CDS
TAAGAAATTGACTGTTGAGA+GGG 0.572937 3:-30041228 None:intergenic
AAACCACGCCTTTGTCAAGA+AGG 0.580517 3:-30038155 None:intergenic
ACTTTCGGCTACGTGGCACA+GGG 0.585351 3:+30041985 MsG0380013084.01.T01:CDS
ATAACTCCATATTGAGTGCA+TGG 0.585518 3:+30042323 MsG0380013084.01.T01:three_prime_UTR
ATTGAGTTTAACCGATGTGT+TGG 0.587338 3:+30041945 MsG0380013084.01.T01:CDS
CTAAGAAATTGACTGTTGAG+AGG 0.591251 3:-30041229 None:intergenic
ATTCAGTTAAAGGACTATCA+GGG 0.594712 3:+30040894 MsG0380013084.01.T01:CDS
GACGGCATCAAGAATAACGA+TGG 0.597619 3:-30041451 None:intergenic
GCTAAGAGAGGCACTGACAC+AGG 0.606195 3:+30042132 MsG0380013084.01.T01:CDS
TCAAGAAGGCGAACATGTGT+CGG 0.609693 3:-30038141 None:intergenic
CACCCTACAAACAAAGTTTG+GGG 0.613565 3:+30041547 MsG0380013084.01.T01:CDS
TTAGTGTGGCGTATGTGTCG+GGG 0.616084 3:+30038111 MsG0380013084.01.T01:CDS
TATGATTGTAAGGCTAAGAG+AGG 0.617643 3:+30042120 MsG0380013084.01.T01:CDS
CTGAGCTCCTGATCAAAAGA+CGG 0.618488 3:-30041469 None:intergenic
GCTAACGTTGATGAAAGAGT+CGG 0.619924 3:+30041601 MsG0380013084.01.T01:CDS
GTTTACCAACCAAGCCATGA+GGG 0.622486 3:+30041865 MsG0380013084.01.T01:CDS
ATTGACATTGCACGTCGACA+AGG 0.625508 3:-30042069 None:intergenic
CTGTTGAGAGGGAAATCAGG+AGG 0.631751 3:-30041217 None:intergenic
ACGGCATCAAGAATAACGAT+GGG 0.632922 3:-30041450 None:intergenic
AACACGTGTTGAAATGGACC+GGG 0.633166 3:-30041652 None:intergenic
CATGTTCGCCTTCTTGACAA+AGG 0.635696 3:+30038147 MsG0380013084.01.T01:CDS
CATTGTGAGGATATGAGTTG+GGG 0.637118 3:+30042177 MsG0380013084.01.T01:CDS
ATGTGTTGGTGACTAGCTCA+TGG 0.637268 3:+30041959 MsG0380013084.01.T01:CDS
GAAGCTCAAGGTCTTGCCGA+AGG 0.638993 3:+30038080 MsG0380013084.01.T01:CDS
TGCTGGGATATGGAAGCTCA+AGG 0.641114 3:+30038068 MsG0380013084.01.T01:CDS
TCGCCTTCTTGACAAAGGCG+TGG 0.641187 3:+30038152 MsG0380013084.01.T01:CDS
TACGTGGCACAGGGGCTCGG+AGG 0.642210 3:+30041994 MsG0380013084.01.T01:CDS
GCCTTACAATCATAGAAAGG+AGG 0.644238 3:-30042111 None:intergenic
GATCGACCATATCGACTCCA+GGG 0.646501 3:-30041156 None:intergenic
TCCTCACAATGTCTTACATG+AGG 0.647592 3:-30042165 None:intergenic
GGCGCATGATTATGATGATG+AGG 0.647599 3:+30041345 MsG0380013084.01.T01:CDS
CCAAAAGAACACGATTTGTG+AGG 0.650604 3:-30041129 None:intergenic
AAAGGAGGAGCATGAAAACA+CGG 0.653870 3:-30042096 None:intergenic
AACTACGTACTTACAGTCTG+GGG 0.654367 3:-30041041 None:intergenic
ATGGTCTACTTTCGGCTACG+TGG 0.655082 3:+30041978 MsG0380013084.01.T01:CDS
CGAAGGTCAAGAATTTAGTG+TGG 0.659418 3:+30038097 MsG0380013084.01.T01:CDS
TGTTGAGAGGGAAATCAGGA+GGG 0.662386 3:-30041216 None:intergenic
TAGTGTGGCGTATGTGTCGG+GGG 0.664625 3:+30038112 MsG0380013084.01.T01:CDS
TGTTTACCAACCAAGCCATG+AGG 0.669655 3:+30041864 MsG0380013084.01.T01:CDS
TGAGCTTCCATATCCCAGCA+GGG 0.693184 3:-30038065 None:intergenic
GACATTGCACGTCGACAAGG+AGG 0.696138 3:-30042066 None:intergenic
TGAGCTAGTCACCAACACAT+CGG 0.705484 3:-30041956 None:intergenic
CTTTCGGCTACGTGGCACAG+GGG 0.727049 3:+30041986 MsG0380013084.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTAAATATAATCATT+TGG - Chr3:30038499-30038518 None:intergenic 10.0%
!!! AAATATTTTAATTCCTATTA+AGG + Chr3:30038450-30038469 MsG0380013084.01.T01:intron 10.0%
!! AATTATGATATATAACACTT+TGG - Chr3:30038684-30038703 None:intergenic 15.0%
!! ATAACAAAGTTCTTAAAAAA+TGG + Chr3:30040553-30040572 MsG0380013084.01.T01:intron 15.0%
!! TATTTACTAAAAATTTCCTT+TGG + Chr3:30038547-30038566 MsG0380013084.01.T01:intron 15.0%
!! TTCTATTTGATAAATAGTTA+AGG + Chr3:30040469-30040488 MsG0380013084.01.T01:intron 15.0%
!! TTTCATATTATTTGGTTATT+AGG + Chr3:30040767-30040786 MsG0380013084.01.T01:intron 15.0%
!!! AACTATTTGATTGTTTTTTA+TGG + Chr3:30040337-30040356 MsG0380013084.01.T01:intron 15.0%
!!! ATATAATGCACTTTTTAATT+TGG + Chr3:30038948-30038967 MsG0380013084.01.T01:intron 15.0%
!!! ATGAATCAATTTTTTTTAAC+AGG + Chr3:30038322-30038341 MsG0380013084.01.T01:intron 15.0%
!!! TAATTTTTTTAAGTTCTGTT+TGG + Chr3:30039602-30039621 MsG0380013084.01.T01:intron 15.0%
!!! TTTTTTCAATTAAAATTGCA+GGG + Chr3:30039798-30039817 MsG0380013084.01.T01:intron 15.0%
!!! TTTTTTTCAATTAAAATTGC+AGG + Chr3:30039797-30039816 MsG0380013084.01.T01:intron 15.0%
!! AACCAATAAATGCATAAAAT+AGG - Chr3:30040694-30040713 None:intergenic 20.0%
!! AAGAAATGAGTAAAATTTGT+AGG + Chr3:30038415-30038434 MsG0380013084.01.T01:intron 20.0%
!! ACATCAATATCAATATCAAT+AGG - Chr3:30042370-30042389 None:intergenic 20.0%
!! AGATCCTTAATGTATTATAA+GGG + Chr3:30039979-30039998 MsG0380013084.01.T01:intron 20.0%
!! ATATGATCTAATAACGTAAA+AGG - Chr3:30039580-30039599 None:intergenic 20.0%
!! ATGTAACGTTTAATTCAATT+TGG + Chr3:30039548-30039567 MsG0380013084.01.T01:intron 20.0%
!! ATTGATATTGATATTGATGT+TGG + Chr3:30042370-30042389 MsG0380013084.01.T01:three_prime_UTR 20.0%
!! CAAAAAATTAAACTTGGATT+TGG - Chr3:30040192-30040211 None:intergenic 20.0%
!! CATAGAAAAAAGAAATATCA+AGG - Chr3:30040439-30040458 None:intergenic 20.0%
!! CATTTCCAAAAAATTAAACT+TGG - Chr3:30040198-30040217 None:intergenic 20.0%
!! TAGTTATTGAAGTTATGAAT+TGG + Chr3:30042227-30042246 MsG0380013084.01.T01:exon 20.0%
!! TGATAGAGTTTCATATTATT+TGG + Chr3:30040759-30040778 MsG0380013084.01.T01:intron 20.0%
!!! AATGTAAATTTTCATATCTC+AGG - Chr3:30038283-30038302 None:intergenic 20.0%
!!! ACCAATTTTTGCTTATATTT+TGG + Chr3:30039232-30039251 MsG0380013084.01.T01:intron 20.0%
!!! ACCAATTTTTGCTTATATTT+TGG - Chr3:30039251-30039232 None:intergenic 20.0%
!!! AGTTTAATTTTTTGGAAATG+TGG + Chr3:30040198-30040217 MsG0380013084.01.T01:intron 20.0%
!!! ATCTTTTACTGTTTTATTGT+AGG - Chr3:30040996-30041015 None:intergenic 20.0%
!!! ATTTTCAAAATCAAGATTCA+AGG - Chr3:30040521-30040540 None:intergenic 20.0%
!!! CAAATCCAAGTTTAATTTTT+TGG + Chr3:30040190-30040209 MsG0380013084.01.T01:intron 20.0%
!!! CCAATTTTTGCTTATATTTT+GGG + Chr3:30039233-30039252 MsG0380013084.01.T01:intron 20.0%
!!! CCAATTTTTGCTTATATTTT+GGG - Chr3:30039252-30039233 None:intergenic 20.0%
!!! CTTGATATTTCTTTTTTCTA+TGG + Chr3:30040437-30040456 MsG0380013084.01.T01:intron 20.0%
!!! GCATATATAAAGTGATTTTT+GGG - Chr3:30040092-30040111 None:intergenic 20.0%
!!! GTTTAATTTTTTGGAAATGT+GGG + Chr3:30040199-30040218 MsG0380013084.01.T01:intron 20.0%
!!! TATAACTAAAAAGACTTGTT+TGG - Chr3:30039917-30039936 None:intergenic 20.0%
!!! TGCATATATAAAGTGATTTT+TGG - Chr3:30040093-30040112 None:intergenic 20.0%
!!! TTCTTATTGGTTAAAAACAA+TGG - Chr3:30039435-30039454 None:intergenic 20.0%
!!! TTTTTCAATTAAAATTGCAG+GGG + Chr3:30039799-30039818 MsG0380013084.01.T01:intron 20.0%
! AAAAAGTAAGAGACATGTAT+TGG + Chr3:30041809-30041828 MsG0380013084.01.T01:CDS 25.0%
! AAAAGTAAGAGACATGTATT+GGG + Chr3:30041810-30041829 MsG0380013084.01.T01:CDS 25.0%
! AAATACACAATCAAAAAGCT+TGG + Chr3:30041908-30041927 MsG0380013084.01.T01:CDS 25.0%
! AAATTAAAATCATCCGAACT+TGG - Chr3:30038377-30038396 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + Chr3:30039447-30039466 MsG0380013084.01.T01:intron 25.0%
! AATACACAATCAAAAAGCTT+GGG + Chr3:30041909-30041928 MsG0380013084.01.T01:CDS 25.0%
! AGTGCATTATATTAATGAAG+AGG - Chr3:30038940-30038959 None:intergenic 25.0%
! ATCTTCGTAATCTTGAAATT+AGG - Chr3:30040934-30040953 None:intergenic 25.0%
! CAAACCCTTATAATACATTA+AGG - Chr3:30039986-30040005 None:intergenic 25.0%
! CAGATCCTTAATGTATTATA+AGG + Chr3:30039978-30039997 MsG0380013084.01.T01:intron 25.0%
! CCCAAAATATAAGCAAAAAT+TGG + Chr3:30039151-30039170 MsG0380013084.01.T01:intron 25.0%
! CCCAAAATATAAGCAAAAAT+TGG - Chr3:30039170-30039151 None:intergenic 25.0%
! CTGTTTGGTAAAATATATAG+CGG + Chr3:30039617-30039636 MsG0380013084.01.T01:intron 25.0%
! GATCAAAGATAAACCTTAAT+AGG - Chr3:30038466-30038485 None:intergenic 25.0%
! GTAGTGTTTGATTAAATTAG+CGG + Chr3:30039715-30039734 MsG0380013084.01.T01:intron 25.0%
! TAAAAAATGGACAATAGAGA+GGG + Chr3:30040566-30040585 MsG0380013084.01.T01:intron 25.0%
! TAATACATTAAGGATCTGTT+TGG - Chr3:30039976-30039995 None:intergenic 25.0%
! TCAACAAAAGTTAATGTATC+TGG - Chr3:30039213-30039232 None:intergenic 25.0%
! TCAACAAAGTTGTCATTAAA+TGG + Chr3:30039473-30039492 MsG0380013084.01.T01:intron 25.0%
! TCAACGAAAGTTAATGTATT+TGG + Chr3:30039174-30039193 MsG0380013084.01.T01:intron 25.0%
! TCCTAAAGCAAAATAAATAG+TGG - Chr3:30042256-30042275 None:intergenic 25.0%
! TGATATATAACACTTTGGTT+TGG - Chr3:30038679-30038698 None:intergenic 25.0%
! TTAAAAAATGGACAATAGAG+AGG + Chr3:30040565-30040584 MsG0380013084.01.T01:intron 25.0%
! TTAGTTAAGATTGAATCAAC+CGG - Chr3:30040295-30040314 None:intergenic 25.0%
!! AGTGTTTGAAATTACAATTC+CGG + Chr3:30040138-30040157 MsG0380013084.01.T01:intron 25.0%
!! ATCTTTTTGGATACTTGAAT+AGG + Chr3:30040611-30040630 MsG0380013084.01.T01:intron 25.0%
!! GAAATAATTTTTGTCAAACC+TGG - Chr3:30038256-30038275 None:intergenic 25.0%
!! GTCCTATTTTATGCATTTAT+TGG + Chr3:30040689-30040708 MsG0380013084.01.T01:intron 25.0%
!! TTTCTCATTTGCATAACTTT+TGG + Chr3:30040728-30040747 MsG0380013084.01.T01:intron 25.0%
!! TTTTTATGGTTTTCTGACAT+TGG + Chr3:30040351-30040370 MsG0380013084.01.T01:intron 25.0%
!!! ACCACTATTTATTTTGCTTT+AGG + Chr3:30042252-30042271 MsG0380013084.01.T01:three_prime_UTR 25.0%
!!! TACTGTTTTATTGTAGGATT+CGG - Chr3:30040990-30041009 None:intergenic 25.0%
!!! TATATAAAGTGATTTTTGGG+TGG - Chr3:30040089-30040108 None:intergenic 25.0%
!!! TGCATTTATTGGTTTTCTAT+TGG + Chr3:30040700-30040719 MsG0380013084.01.T01:intron 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - Chr3:30039448-30039467 None:intergenic 25.0%
!!! TTTTTGCTTATATTTTGGGA+CGG + Chr3:30039237-30039256 MsG0380013084.01.T01:intron 25.0%
AAAAACTAACATCCCAATTC+AGG - Chr3:30040639-30040658 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - Chr3:30039422-30039441 None:intergenic 30.0%
AAAACTAACATCCCAATTCA+GGG - Chr3:30040638-30040657 None:intergenic 30.0%
AATATACCATGCACTCAATA+TGG - Chr3:30042332-30042351 None:intergenic 30.0%
AATTCAGTTAAAGGACTATC+AGG + Chr3:30040893-30040912 MsG0380013084.01.T01:CDS 30.0%
ACAGTAAAAGATCTCAATTC+TGG + Chr3:30041004-30041023 MsG0380013084.01.T01:CDS 30.0%
AGCAGGTATAATTCAGTTAA+AGG + Chr3:30040884-30040903 MsG0380013084.01.T01:CDS 30.0%
AGTAATAGTCTAGTCAAAGA+TGG + Chr3:30040242-30040261 MsG0380013084.01.T01:intron 30.0%
ATAAAGAAATGCAGAAGCTA+AGG - Chr3:30041104-30041123 None:intergenic 30.0%
ATATTGAGTGCATGGTATAT+TGG + Chr3:30042331-30042350 MsG0380013084.01.T01:three_prime_UTR 30.0%
ATCAAATAGTTGAGCTGATA+TGG - Chr3:30040328-30040347 None:intergenic 30.0%
ATCCAAAAAGATAGTCTACA+TGG - Chr3:30040603-30040622 None:intergenic 30.0%
ATGAAACACAAATACTCTCT+CGG - Chr3:30039106-30039125 None:intergenic 30.0%
ATTCAGTTAAAGGACTATCA+GGG + Chr3:30040894-30040913 MsG0380013084.01.T01:CDS 30.0%
CGTAATCTTGAAATTAGGTA+AGG - Chr3:30040929-30040948 None:intergenic 30.0%
GTAGTTTGGATTTCATTTAG+CGG + Chr3:30041058-30041077 MsG0380013084.01.T01:CDS 30.0%
GTATTTGTGTTTCATAGGAT+TGG + Chr3:30039111-30039130 MsG0380013084.01.T01:intron 30.0%
TAAGAAATTGACTGTTGAGA+GGG - Chr3:30041231-30041250 None:intergenic 30.0%
TATACGAGCTTATAAGCTAT+AGG + Chr3:30039933-30039952 MsG0380013084.01.T01:intron 30.0%
TATTGAGTGCATGGTATATT+GGG + Chr3:30042332-30042351 MsG0380013084.01.T01:three_prime_UTR 30.0%
TGAAAACAGGAACATTTCTA+TGG - Chr3:30038752-30038771 None:intergenic 30.0%
TTCCCAAAAGATAAACTACT+TGG + Chr3:30040821-30040840 MsG0380013084.01.T01:CDS 30.0%
TTCGAAATAACCAGAGTTTA+AGG - Chr3:30041791-30041810 None:intergenic 30.0%
TTGACTAGACTATTACTTAC+AGG - Chr3:30040239-30040258 None:intergenic 30.0%
TTTACTATCTCATCCAAGTT+CGG + Chr3:30038361-30038380 MsG0380013084.01.T01:intron 30.0%
TTTCAAACACTTAGAAGTTG+TGG - Chr3:30040129-30040148 None:intergenic 30.0%
! CACCAAGTAGTTTATCTTTT+GGG - Chr3:30040826-30040845 None:intergenic 30.0%
! GACAAAGTTTTCCATTTCTT+AGG + Chr3:30041511-30041530 MsG0380013084.01.T01:CDS 30.0%
! GACAAGAAGCATGATAATAT+TGG + Chr3:30041724-30041743 MsG0380013084.01.T01:CDS 30.0%
! TCTGTTTTCATCATTAACCA+AGG - Chr3:30041418-30041437 None:intergenic 30.0%
! TTATTGTAGGATTCGGTATA+AGG - Chr3:30040983-30041002 None:intergenic 30.0%
!! AGAGAGTATTTGTGTTTCAT+AGG + Chr3:30039106-30039125 MsG0380013084.01.T01:intron 30.0%
!! TTAGCCTTACAATCATAGAA+AGG - Chr3:30042117-30042136 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + Chr3:30039350-30039369 MsG0380013084.01.T01:intron 30.0%
!!! TAATTTTTTGGAAATGTGGG+TGG + Chr3:30040202-30040221 MsG0380013084.01.T01:intron 30.0%
AAAACTCTTAACCCTCTCTT+TGG + Chr3:30040015-30040034 MsG0380013084.01.T01:intron 35.0%
AAACTACGTACTTACAGTCT+GGG - Chr3:30041045-30041064 None:intergenic 35.0%
AAATGAAGGTAGACAGAAGA+AGG - Chr3:30041325-30041344 None:intergenic 35.0%
AATCCACGGATCTAAATTCA+AGG + Chr3:30038645-30038664 MsG0380013084.01.T01:intron 35.0%
AATTTCTGCAGAAAGTTCCT+TGG + Chr3:30041398-30041417 MsG0380013084.01.T01:CDS 35.0%
ACAAATACCTGCCTAAGAAA+TGG - Chr3:30041525-30041544 None:intergenic 35.0%
ACATTGTGAGGATATGAGTT+GGG + Chr3:30042176-30042195 MsG0380013084.01.T01:CDS 35.0%
ATAACTCCATATTGAGTGCA+TGG + Chr3:30042323-30042342 MsG0380013084.01.T01:three_prime_UTR 35.0%
ATGCACTCAATATGGAGTTA+TGG - Chr3:30042324-30042343 None:intergenic 35.0%
ATTCCTTGAATTTAGATCCG+TGG - Chr3:30038651-30038670 None:intergenic 35.0%
ATTGAGTTTAACCGATGTGT+TGG + Chr3:30041945-30041964 MsG0380013084.01.T01:CDS 35.0%
CACACTAAATTCTTGACCTT+CGG - Chr3:30038099-30038118 None:intergenic 35.0%
CAGTAATCTCTTTCCAAACA+AGG + Chr3:30041489-30041508 MsG0380013084.01.T01:CDS 35.0%
CCAAAAGATAAACTACTTGG+TGG + Chr3:30040824-30040843 MsG0380013084.01.T01:CDS 35.0%
CTAAGAAATTGACTGTTGAG+AGG - Chr3:30041232-30041251 None:intergenic 35.0%
CTAATGACATCCTTAAACTC+TGG + Chr3:30041778-30041797 MsG0380013084.01.T01:CDS 35.0%
CTTGAAATTAGGTAAGGAGA+TGG - Chr3:30040923-30040942 None:intergenic 35.0%
GGATTTCATTTAGCGGTTTA+GGG + Chr3:30041065-30041084 MsG0380013084.01.T01:CDS 35.0%
GTAAACACCAATAACTTCTC+CGG - Chr3:30041851-30041870 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - Chr3:30039355-30039374 None:intergenic 35.0%
TACTTGTTTACATGCTCTGT+TGG + Chr3:30040665-30040684 MsG0380013084.01.T01:intron 35.0%
TATGATTGTAAGGCTAAGAG+AGG + Chr3:30042120-30042139 MsG0380013084.01.T01:CDS 35.0%
TCACCCTACAAACAAAGTTT+GGG + Chr3:30041546-30041565 MsG0380013084.01.T01:CDS 35.0%
TCAGGTTTGTATAGTATCCA+AGG - Chr3:30042027-30042046 None:intergenic 35.0%
TCCATATGGCATGATTTATC+CGG - Chr3:30040160-30040179 None:intergenic 35.0%
TCCTCCTTTCTATGATTGTA+AGG + Chr3:30042110-30042129 MsG0380013084.01.T01:CDS 35.0%
TGATCAAACACGTGTTGAAA+TGG - Chr3:30041661-30041680 None:intergenic 35.0%
TGGAAAACTTTGTCCTTGTT+TGG - Chr3:30041505-30041524 None:intergenic 35.0%
TGGATTTCATTTAGCGGTTT+AGG + Chr3:30041064-30041083 MsG0380013084.01.T01:CDS 35.0%
TTCACCCTACAAACAAAGTT+TGG + Chr3:30041545-30041564 MsG0380013084.01.T01:CDS 35.0%
TTCTTCTGTCTACCTTCATT+TGG + Chr3:30041324-30041343 MsG0380013084.01.T01:CDS 35.0%
TTGTGTTTCATAGGATTGGA+TGG + Chr3:30039115-30039134 MsG0380013084.01.T01:intron 35.0%
TTTCTCCCTTTACTATCTCT+TGG - Chr3:30040061-30040080 None:intergenic 35.0%
! AAGTTTTCCATTTCTTAGGC+AGG + Chr3:30041515-30041534 MsG0380013084.01.T01:CDS 35.0%
! AATCCCCAAACTTTGTTTGT+AGG - Chr3:30041553-30041572 None:intergenic 35.0%
! AGATGAAGAAGACTAGTTGT+AGG - Chr3:30038873-30038892 None:intergenic 35.0%
! ATCCCCAAACTTTGTTTGTA+GGG - Chr3:30041552-30041571 None:intergenic 35.0%
! CCACCAAGTAGTTTATCTTT+TGG - Chr3:30040827-30040846 None:intergenic 35.0%
! CGGATTATATGCTAGCTTAT+AGG + Chr3:30039637-30039656 MsG0380013084.01.T01:intron 35.0%
! GACCATGTAGACTATCTTTT+TGG + Chr3:30040598-30040617 MsG0380013084.01.T01:intron 35.0%
! TTTGGAAGTGTACTTCCATA+TGG - Chr3:30040174-30040193 None:intergenic 35.0%
!! ATAGCTGATAGTGGATAAAC+TGG + Chr3:30039680-30039699 MsG0380013084.01.T01:intron 35.0%
!! GATCTTAGCTTGTACTTTGA+AGG + Chr3:30041681-30041700 MsG0380013084.01.T01:CDS 35.0%
!!! TATAAGGTCCGCATTTTTTG+TGG - Chr3:30040967-30040986 None:intergenic 35.0%
!!! TGCTTATATTTTGGGACAGA+GGG - Chr3:30039146-30039165 None:intergenic 35.0%
!!! TTGCTTATATTTTGGGACAG+AGG - Chr3:30039147-30039166 None:intergenic 35.0%
AAACACGTGTTGAAATGGAC+CGG - Chr3:30041656-30041675 None:intergenic 40.0%
AACTACGTACTTACAGTCTG+GGG - Chr3:30041044-30041063 None:intergenic 40.0%
ACGGCATCAAGAATAACGAT+GGG - Chr3:30041453-30041472 None:intergenic 40.0%
ACTAGCTCATGGTCTACTTT+CGG + Chr3:30041970-30041989 MsG0380013084.01.T01:CDS 40.0%
ACTTGAATAGGTCCCTGAAT+TGG + Chr3:30040623-30040642 MsG0380013084.01.T01:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG - Chr3:30039412-30039431 None:intergenic 40.0%
AGTCAAAGATGGTTTCAGTC+AGG + Chr3:30040253-30040272 MsG0380013084.01.T01:intron 40.0%
ATTTAGTGTGGCGTATGTGT+CGG + Chr3:30038109-30038128 MsG0380013084.01.T01:CDS 40.0%
CAAACTACGTACTTACAGTC+TGG - Chr3:30041046-30041065 None:intergenic 40.0%
CACAAATACTCTCTCGGATT+AGG - Chr3:30039100-30039119 None:intergenic 40.0%
CACCCTACAAACAAAGTTTG+GGG + Chr3:30041547-30041566 MsG0380013084.01.T01:CDS 40.0%
CAGAAATCTGATCACTGTCA+TGG + Chr3:30041259-30041278 MsG0380013084.01.T01:CDS 40.0%
CAGACTGTAAGTACGTAGTT+TGG + Chr3:30041044-30041063 MsG0380013084.01.T01:CDS 40.0%
CATAATCATGCGCCAAATGA+AGG - Chr3:30041339-30041358 None:intergenic 40.0%
CATTGTGAGGATATGAGTTG+GGG + Chr3:30042177-30042196 MsG0380013084.01.T01:CDS 40.0%
CCAAAAGAACACGATTTGTG+AGG - Chr3:30041132-30041151 None:intergenic 40.0%
CCAGTTGTTCATGAATCATG+AGG + Chr3:30038193-30038212 MsG0380013084.01.T01:intron 40.0%
CCTCATGATTCATGAACAAC+TGG - Chr3:30038196-30038215 None:intergenic 40.0%
CGAAGGTCAAGAATTTAGTG+TGG + Chr3:30038097-30038116 MsG0380013084.01.T01:CDS 40.0%
CTCAGACAGAATCAACAACT+AGG + Chr3:30038891-30038910 MsG0380013084.01.T01:intron 40.0%
CTTGAATAGGTCCCTGAATT+GGG + Chr3:30040624-30040643 MsG0380013084.01.T01:intron 40.0%
GAACAACTGGCACAATTGTT+CGG - Chr3:30038183-30038202 None:intergenic 40.0%
GAAGCTCTCCACAAAAAATG+CGG + Chr3:30040956-30040975 MsG0380013084.01.T01:CDS 40.0%
GACATTGTGAGGATATGAGT+TGG + Chr3:30042175-30042194 MsG0380013084.01.T01:CDS 40.0%
GCCTTACAATCATAGAAAGG+AGG - Chr3:30042114-30042133 None:intergenic 40.0%
TCATGCTTCTTGTCAACATC+AGG - Chr3:30041718-30041737 None:intergenic 40.0%
TCCATCAGTGAATGAATCCA+CGG + Chr3:30038631-30038650 MsG0380013084.01.T01:intron 40.0%
TCCGGATAAATCATGCCATA+TGG + Chr3:30040156-30040175 MsG0380013084.01.T01:intron 40.0%
TCCTCACAATGTCTTACATG+AGG - Chr3:30042168-30042187 None:intergenic 40.0%
TCCTCATGTAAGACATTGTG+AGG + Chr3:30042164-30042183 MsG0380013084.01.T01:CDS 40.0%
TGAATTATACCTGCTGAGAC+AGG - Chr3:30040879-30040898 None:intergenic 40.0%
TGGAGAAGATGGAAGAATGA+AGG - Chr3:30038832-30038851 None:intergenic 40.0%
TTCGGCCAAGAGATAGTAAA+GGG + Chr3:30040053-30040072 MsG0380013084.01.T01:intron 40.0%
! AAAGGAGGAGCATGAAAACA+CGG - Chr3:30042099-30042118 None:intergenic 40.0%
! AGCTAGCTTATAGCTGATAG+TGG + Chr3:30039671-30039690 MsG0380013084.01.T01:intron 40.0%
! CCTAATATGAAACACCGACT+CGG + Chr3:30038998-30039017 MsG0380013084.01.T01:intron 40.0%
! CCTCACAAATCGTGTTCTTT+TGG + Chr3:30041129-30041148 MsG0380013084.01.T01:CDS 40.0%
! GCTAACGTTGATGAAAGAGT+CGG + Chr3:30041601-30041620 MsG0380013084.01.T01:CDS 40.0%
!! CAGTTTGTTGATATCCCTCA+TGG - Chr3:30041882-30041901 None:intergenic 40.0%
!! GGAGTTGTAGTTGATGATGA+TGG - Chr3:30038852-30038871 None:intergenic 40.0%
!! GTAGACAGAAGAAGGTACTT+TGG - Chr3:30041317-30041336 None:intergenic 40.0%
!! GTTGATGATGATGGAGAAGA+TGG - Chr3:30038843-30038862 None:intergenic 40.0%
!! TGGGAACTCTTTAGAATCAG+AGG - Chr3:30040807-30040826 None:intergenic 40.0%
!! TGGTTTTCTGACATTGGCTA+AGG + Chr3:30040357-30040376 MsG0380013084.01.T01:intron 40.0%
!! TTATTGTCCTTTTGCTGTCC+AGG + Chr3:30038235-30038254 MsG0380013084.01.T01:intron 40.0%
!!! TGCTTATATTTTGGGACGGA+GGG + Chr3:30039241-30039260 MsG0380013084.01.T01:intron 40.0%
!!! TTGCTTATATTTTGGGACGG+AGG + Chr3:30039240-30039259 MsG0380013084.01.T01:intron 40.0%
!!! TTTTTTGGAAATGTGGGTGG+AGG + Chr3:30040205-30040224 MsG0380013084.01.T01:intron 40.0%
AAACCACGCCTTTGTCAAGA+AGG - Chr3:30038158-30038177 None:intergenic 45.0%
AAAGAGTCGGCATCCAGATT+AGG + Chr3:30041614-30041633 MsG0380013084.01.T01:CDS 45.0%
AACACGTGTTGAAATGGACC+GGG - Chr3:30041655-30041674 None:intergenic 45.0%
AAGAGTCGGCATCCAGATTA+GGG + Chr3:30041615-30041634 MsG0380013084.01.T01:CDS 45.0%
AAGCGAGTGGAAGTGAAAAC+AGG - Chr3:30038765-30038784 None:intergenic 45.0%
ACTGTGACCGGAGAAGTTAT+TGG + Chr3:30041841-30041860 MsG0380013084.01.T01:CDS 45.0%
AGTCTGGGGACTCACTTAAA+TGG - Chr3:30041030-30041049 None:intergenic 45.0%
ATAACTTCTCCGGTCACAGT+TGG - Chr3:30041841-30041860 None:intergenic 45.0%
ATGATAGATCCTGTCTCAGC+AGG + Chr3:30040867-30040886 MsG0380013084.01.T01:CDS 45.0%
ATTGACATTGCACGTCGACA+AGG - Chr3:30042072-30042091 None:intergenic 45.0%
CATGTTCGCCTTCTTGACAA+AGG + Chr3:30038147-30038166 MsG0380013084.01.T01:CDS 45.0%
CATTTAGCGGTTTAGGGAAC+AGG + Chr3:30041071-30041090 MsG0380013084.01.T01:CDS 45.0%
CTGAGCTCCTGATCAAAAGA+CGG - Chr3:30041472-30041491 None:intergenic 45.0%
GACGGCATCAAGAATAACGA+TGG - Chr3:30041454-30041473 None:intergenic 45.0%
GTTCGGCCAAGAGATAGTAA+AGG + Chr3:30040052-30040071 MsG0380013084.01.T01:intron 45.0%
GTTTACCAACCAAGCCATGA+GGG + Chr3:30041865-30041884 MsG0380013084.01.T01:CDS 45.0%
GTTTCAGTCAGGATCGAACT+CGG + Chr3:30040264-30040283 MsG0380013084.01.T01:intron 45.0%
TCAAGAAGGCGAACATGTGT+CGG - Chr3:30038144-30038163 None:intergenic 45.0%
TCCGTGGATTCATTCACTGA+TGG - Chr3:30038635-30038654 None:intergenic 45.0%
TCGTGTCGAAAACCCTAATC+TGG - Chr3:30041630-30041649 None:intergenic 45.0%
TCTTAACCCTCTCTTTGGCA+CGG + Chr3:30040020-30040039 MsG0380013084.01.T01:intron 45.0%
TGACTGTTGAGAGGGAAATC+AGG - Chr3:30041223-30041242 None:intergenic 45.0%
TGAGCTAGTCACCAACACAT+CGG - Chr3:30041959-30041978 None:intergenic 45.0%
TGGGAATATCCAACTGTGAC+CGG + Chr3:30041829-30041848 MsG0380013084.01.T01:CDS 45.0%
TGTCAAACCTGGACAGCAAA+AGG - Chr3:30038245-30038264 None:intergenic 45.0%
TGTTGAGAGGGAAATCAGGA+GGG - Chr3:30041219-30041238 None:intergenic 45.0%
TGTTGATATCCCTCATGGCT+TGG - Chr3:30041877-30041896 None:intergenic 45.0%
TGTTTACCAACCAAGCCATG+AGG + Chr3:30041864-30041883 MsG0380013084.01.T01:CDS 45.0%
TTGTCGACGTGCAATGTCAA+TGG + Chr3:30042071-30042090 MsG0380013084.01.T01:CDS 45.0%
TTTAGTGTGGCGTATGTGTC+GGG + Chr3:30038110-30038129 MsG0380013084.01.T01:CDS 45.0%
! AACCAGGAGACATCTGGAAT+CGG - Chr3:30041193-30041212 None:intergenic 45.0%
! AGGATCGAACTCGGTTTTTC+CGG + Chr3:30040273-30040292 MsG0380013084.01.T01:intron 45.0%
! CCGAGTCGGTGTTTCATATT+AGG - Chr3:30039001-30039020 None:intergenic 45.0%
! CTTGATGCCGTCTTTTGATC+AGG + Chr3:30041462-30041481 MsG0380013084.01.T01:CDS 45.0%
! GGATATGAGTTGGGGTCTTA+AGG + Chr3:30042185-30042204 MsG0380013084.01.T01:CDS 45.0%
! GGCGCATGATTATGATGATG+AGG + Chr3:30041345-30041364 MsG0380013084.01.T01:CDS 45.0%
!! ATGTGTTGGTGACTAGCTCA+TGG + Chr3:30041959-30041978 MsG0380013084.01.T01:CDS 45.0%
ACAGCTCATCATCGTGCCAA+AGG - Chr3:30038566-30038585 None:intergenic 50.0%
ATCAGTGTCTGTGTCCGAGT+CGG - Chr3:30039015-30039034 None:intergenic 50.0%
ATGGTCTACTTTCGGCTACG+TGG + Chr3:30041978-30041997 MsG0380013084.01.T01:CDS 50.0%
CTGTTGAGAGGGAAATCAGG+AGG - Chr3:30041220-30041239 None:intergenic 50.0%
GAAATCAGGAGGGAGAAACC+AGG - Chr3:30041209-30041228 None:intergenic 50.0%
GAGAGAAGCGAATAAGCGAG+TGG - Chr3:30038778-30038797 None:intergenic 50.0%
TCACTACCGTGCCAAAGAGA+GGG - Chr3:30040029-30040048 None:intergenic 50.0%
TGAGCTTCCATATCCCAGCA+GGG - Chr3:30038068-30038087 None:intergenic 50.0%
TGCTGGGATATGGAAGCTCA+AGG + Chr3:30038068-30038087 MsG0380013084.01.T01:CDS 50.0%
TGGCACGGTAGTGAACAGTT+CGG + Chr3:30040035-30040054 MsG0380013084.01.T01:intron 50.0%
TTAGTGTGGCGTATGTGTCG+GGG + Chr3:30038111-30038130 MsG0380013084.01.T01:CDS 50.0%
TTCACTACCGTGCCAAAGAG+AGG - Chr3:30040030-30040049 None:intergenic 50.0%
TTGAGCTTCCATATCCCAGC+AGG - Chr3:30038069-30038088 None:intergenic 50.0%
! AACCGATTCCAGATGTCTCC+TGG + Chr3:30041188-30041207 MsG0380013084.01.T01:CDS 50.0%
!! AGATCGACCATATCGACTCC+AGG - Chr3:30041160-30041179 None:intergenic 50.0%
!! CGTGTTCTTTTGGTTGACCC+TGG + Chr3:30041139-30041158 MsG0380013084.01.T01:CDS 50.0%
!! CTTGGTGGACTTCTAGCATC+TGG + Chr3:30040839-30040858 MsG0380013084.01.T01:CDS 50.0%
!! GATATCCCTCATGGCTTGGT+TGG - Chr3:30041873-30041892 None:intergenic 50.0%
!! GATCGACCATATCGACTCCA+GGG - Chr3:30041159-30041178 None:intergenic 50.0%
ACTTTCGGCTACGTGGCACA+GGG + Chr3:30041985-30042004 MsG0380013084.01.T01:CDS 55.0%
GAAGCTCAAGGTCTTGCCGA+AGG + Chr3:30038080-30038099 MsG0380013084.01.T01:CDS 55.0%
GACATTGCACGTCGACAAGG+AGG - Chr3:30042069-30042088 None:intergenic 55.0%
GGGAGAAACCAGGAGACATC+TGG - Chr3:30041199-30041218 None:intergenic 55.0%
GGTTGACCCTGGAGTCGATA+TGG + Chr3:30041150-30041169 MsG0380013084.01.T01:CDS 55.0%
TACTTTCGGCTACGTGGCAC+AGG + Chr3:30041984-30042003 MsG0380013084.01.T01:CDS 55.0%
TAGTGTGGCGTATGTGTCGG+GGG + Chr3:30038112-30038131 MsG0380013084.01.T01:CDS 55.0%
TCGCCTTCTTGACAAAGGCG+TGG + Chr3:30038152-30038171 MsG0380013084.01.T01:CDS 55.0%
! AGGGTTTTCGACACGAGACC+CGG + Chr3:30041634-30041653 MsG0380013084.01.T01:CDS 55.0%
! GGCTCGGAGGTTTGAAACCT+TGG + Chr3:30042007-30042026 MsG0380013084.01.T01:CDS 55.0%
!! GCTAAGAGAGGCACTGACAC+AGG + Chr3:30042132-30042151 MsG0380013084.01.T01:CDS 55.0%
CTTCCATATCCCAGCAGGGC+CGG - Chr3:30038064-30038083 None:intergenic 60.0%
CTTTCGGCTACGTGGCACAG+GGG + Chr3:30041986-30042005 MsG0380013084.01.T01:CDS 60.0%
GCACGTCGACAAGGAGGATC+AGG - Chr3:30042063-30042082 None:intergenic 60.0%
ATGTGTTGGGCCGGCCCTGC+TGG + Chr3:30038051-30038070 MsG0380013084.01.T01:CDS 70.0%
GGCTACGTGGCACAGGGGCT+CGG + Chr3:30041991-30042010 MsG0380013084.01.T01:CDS 70.0%
TACGTGGCACAGGGGCTCGG+AGG + Chr3:30041994-30042013 MsG0380013084.01.T01:CDS 70.0%
TGTGTTGGGCCGGCCCTGCT+GGG + Chr3:30038052-30038071 MsG0380013084.01.T01:CDS 70.0%
GGGCCGGCCCTGCTGGGATA+TGG + Chr3:30038058-30038077 MsG0380013084.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 30038051 30042399 30038051 ID=MsG0380013084.01;Name=MsG0380013084.01
Chr3 mRNA 30038051 30042399 30038051 ID=MsG0380013084.01.T01;Parent=MsG0380013084.01;Name=MsG0380013084.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0|0.33|0.66|1|1|3|163|534
Chr3 exon 30040789 30042399 30040789 ID=MsG0380013084.01.T01:exon:6762;Parent=MsG0380013084.01.T01
Chr3 exon 30038344 30038377 30038344 ID=MsG0380013084.01.T01:exon:6761;Parent=MsG0380013084.01.T01
Chr3 exon 30038051 30038173 30038051 ID=MsG0380013084.01.T01:exon:6760;Parent=MsG0380013084.01.T01
Chr3 CDS 30038051 30038173 30038051 ID=MsG0380013084.01.T01:cds;Parent=MsG0380013084.01.T01
Chr3 CDS 30038344 30038377 30038344 ID=MsG0380013084.01.T01:cds;Parent=MsG0380013084.01.T01
Chr3 CDS 30040789 30042236 30040789 ID=MsG0380013084.01.T01:cds;Parent=MsG0380013084.01.T01
Chr3 three_prime_UTR 30042237 30042399 30042237 ID=MsG0380013084.01.T01:three_prime_utr;Parent=MsG0380013084.01.T01
Gene Sequence

>MsG0380013084.01.T01

ATGTGTTGGGCCGGCCCTGCTGGGATATGGAAGCTCAAGGTCTTGCCGAAGGTCAAGAATTTAGTGTGGCGTATGTGTCGGGGGTGCTTACCGACACATGTTCGCCTTCTTGACAAAGGCGTGGAAATTGAAAGAGATACTTTACTATCTCATCCAAGTTTGAAGAGTGATGCCTCTGATTCTAAAGAGTTCCCAAAAGATAAACTACTTGGTGGACTTCTAGCATCTGGATTTGATGATAGATCCTGTCTCAGCAGGTATAATTCAGTTAAAGGACTATCAGGGAATCCATCTCCTTACCTAATTTCAAGATTACGAAGATACGAAGCTCTCCACAAAAAATGCGGACCTTATACCGAATCCTACAATAAAACAGTAAAAGATCTCAATTCTGGCCATTTAAGTGAGTCCCCAGACTGTAAGTACGTAGTTTGGATTTCATTTAGCGGTTTAGGGAACAGGATTTTGACCTTAGCTTCTGCATTTCTTTATGCTCTCCTCACAAATCGTGTTCTTTTGGTTGACCCTGGAGTCGATATGGTCGATCTCTTTTGTGAACCGATTCCAGATGTCTCCTGGTTTCTCCCTCCTGATTTCCCTCTCAACAGTCAATTTCTTAGTTTGAATCAGAAATCTGATCACTGTCATGGAAAAATGCTAAAAAATAAATCAGTCACAAATTCCAAAGTACCTTCTTCTGTCTACCTTCATTTGGCGCATGATTATGATGATGAGGATAAGCTTTTTTTCTGTGATGAAGAACAAAAATTTCTGCAGAAAGTTCCTTGGTTAATGATGAAAACAGATAATTACTTTATCCCATCGTTATTCTTGATGCCGTCTTTTGATCAGGAGCTCAGTAATCTCTTTCCAAACAAGGACAAAGTTTTCCATTTCTTAGGCAGGTATTTGTTTCACCCTACAAACAAAGTTTGGGGATTTGTTTCTAGATACTATCAAGCTTATTTAGCTAACGTTGATGAAAGAGTCGGCATCCAGATTAGGGTTTTCGACACGAGACCCGGTCCATTTCAACACGTGTTTGATCAGATCTTAGCTTGTACTTTGAAGGAGAATCTCTTGCCTGATGTTGACAAGAAGCATGATAATATTGGTTCATTAAAAAATTTGAAGTCGAAAGCAGTACTAATGACATCCTTAAACTCTGGTTATTTCGAAAAAGTAAGAGACATGTATTGGGAATATCCAACTGTGACCGGAGAAGTTATTGGTGTTTACCAACCAAGCCATGAGGGATATCAACAAACTGAGAAGCAAATACACAATCAAAAAGCTTGGGCAGAAATGTATCTATTGAGTTTAACCGATGTGTTGGTGACTAGCTCATGGTCTACTTTCGGCTACGTGGCACAGGGGCTCGGAGGTTTGAAACCTTGGATACTATACAAACCTGAGAACGAAACTGCTCCTGATCCTCCTTGTCGACGTGCAATGTCAATGGAGCCGTGTTTTCATGCTCCTCCTTTCTATGATTGTAAGGCTAAGAGAGGCACTGACACAGGTGCACTTGTTCCTCATGTAAGACATTGTGAGGATATGAGTTGGGGTCTTAAGGTTGTAGACAATAATAGTGCTAGTTATTGA
Protein sequence

>MsG0380013084.01.T01

MCWAGPAGIWKLKVLPKVKNLVWRMCRGCLPTHVRLLDKGVEIERDTLLSHPSLKSDASDSKEFPKDKLLGGLLASGFDDRSCLSRYNSVKGLSGNPSPYLISRLRRYEALHKKCGPYTESYNKTVKDLNSGHLSESPDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVDLFCEPIPDVSWFLPPDFPLNSQFLSLNQKSDHCHGKMLKNKSVTNSKVPSSVYLHLAHDYDDEDKLFFCDEEQKFLQKVPWLMMKTDNYFIPSLFLMPSFDQELSNLFPNKDKVFHFLGRYLFHPTNKVWGFVSRYYQAYLANVDERVGIQIRVFDTRPGPFQHVFDQILACTLKENLLPDVDKKHDNIGSLKNLKSKAVLMTSLNSGYFEKVRDMYWEYPTVTGEVIGVYQPSHEGYQQTEKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENETAPDPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKVVDNNSASY*