AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031214.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031214.01.T01 MTR_0024s0330 87.940 597 55 2 238 834 155 734 0.0 990
MsG0680031214.01.T01 MTR_0024s0330 80.447 358 40 3 5 345 1 345 1.12e-174 522
MsG0680031214.01.T01 MTR_6g017265 72.222 468 95 2 398 834 171 634 0.0 654
MsG0680031214.01.T01 MTR_6g017265 67.078 243 59 4 5 238 1 231 5.23e-91 300
MsG0680031214.01.T01 MTR_6g017265 74.000 50 13 0 296 345 165 214 2.18e-11 67.8
MsG0680031214.01.T01 MTR_5g018400 42.647 136 73 2 33 166 148 280 4.16e-26 111
MsG0680031214.01.T01 MTR_5g018470 41.304 138 71 3 33 166 150 281 1.01e-24 108
MsG0680031214.01.T01 MTR_4g087240 36.066 122 67 3 38 154 171 286 1.05e-16 82.4
MsG0680031214.01.T01 MTR_6g070950 40.708 113 40 4 41 128 167 277 2.10e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031214.01.T01 AT5G38690 40.359 446 246 11 387 825 125 557 2.39e-80 270
MsG0680031214.01.T01 AT5G38690 62.385 109 41 0 39 147 21 129 1.29e-40 158
MsG0680031214.01.T01 AT5G38690 40.359 446 246 11 387 825 125 557 2.39e-80 270
MsG0680031214.01.T01 AT5G38690 62.385 109 41 0 39 147 21 129 1.29e-40 158
MsG0680031214.01.T01 AT1G67780 38.272 324 184 6 508 825 185 498 9.57e-54 195
MsG0680031214.01.T01 AT1G67780 69.298 114 35 0 28 141 13 126 1.10e-48 181
MsG0680031214.01.T01 AT1G67780 38.272 324 184 6 508 825 185 498 9.57e-54 195
MsG0680031214.01.T01 AT1G67780 69.298 114 35 0 28 141 13 126 1.10e-48 181
MsG0680031214.01.T01 AT1G67270 38.782 312 180 4 508 817 181 483 2.55e-52 191
MsG0680031214.01.T01 AT1G67270 64.912 114 40 0 28 141 5 118 9.39e-44 166
MsG0680031214.01.T01 AT2G23530 46.729 107 48 2 38 141 153 253 6.67e-24 107
MsG0680031214.01.T01 AT4G37110 39.716 141 62 3 11 148 64 184 1.78e-22 99.8
MsG0680031214.01.T01 AT4G37110 39.716 141 62 3 11 148 64 184 1.78e-22 99.8
MsG0680031214.01.T01 AT4G37110 41.667 132 54 3 13 141 148 259 5.86e-22 99.8
MsG0680031214.01.T01 AT4G37110 41.667 132 54 3 13 141 161 272 6.60e-22 99.8

Find 199 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTTGTGGTAGATCTATT+TGG 0.184927 6:-16105793 MsG0680031214.01.T01:CDS
AAATGCGGAGTTCGTGTTAT+TGG 0.198381 6:-16108166 MsG0680031214.01.T01:CDS
ATAGGTTTAAAGGTTGAAAA+TGG 0.202435 6:-16105454 MsG0680031214.01.T01:CDS
CTTATTTACAAAATCGATTA+TGG 0.212703 6:-16108275 MsG0680031214.01.T01:exon
TCCAGAGTAGCTTCCTTTAC+AGG 0.213413 6:+16105998 None:intergenic
ATCGATTATGGCTACTAAAA+TGG 0.214036 6:-16108263 MsG0680031214.01.T01:exon
AAACATTATACCCCAATATT+TGG 0.228669 6:+16100868 None:intergenic
AAACTCATGGTTGAAAGTTT+TGG 0.234305 6:-16102584 MsG0680031214.01.T01:CDS
CCTACTGAATTCTGCTTCAT+AGG 0.236786 6:+16105142 None:intergenic
ACTTGTGGCAGAACTTAATT+TGG 0.257589 6:+16106484 None:intergenic
CCTACTGAATTCTGCTTCAT+AGG 0.261978 6:+16105181 None:intergenic
AAAGAAGGCTTCTGAAAGTT+TGG 0.270786 6:-16106044 MsG0680031214.01.T01:CDS
AGGTGAAAATATAGGTTTAA+AGG 0.273791 6:-16105122 MsG0680031214.01.T01:CDS
TGCAAATGCCTCTGCACTTT+GGG 0.282113 6:+16106264 None:intergenic
AGGTGGAAACATAGGTTTAA+AGG 0.283529 6:-16105464 MsG0680031214.01.T01:CDS
AGGTGAAAACATAGGTTTAA+AGG 0.283661 6:-16104486 MsG0680031214.01.T01:CDS
AGGTGAAAACATAGGTTTAA+AGG 0.283661 6:-16104817 MsG0680031214.01.T01:CDS
CCGTCGGATTGGCTTAATAA+AGG 0.290448 6:-16102520 MsG0680031214.01.T01:CDS
TGGCAAGGCTTCCCAGTTCT+TGG 0.297547 6:+16106504 None:intergenic
AGGTGGAAACAAAGGTTTAA+AGG 0.298135 6:-16105746 MsG0680031214.01.T01:CDS
GAGCTTGTAGTGGATCTATC+TGG 0.299492 6:-16105511 MsG0680031214.01.T01:CDS
AGCTTGTGGTAGATCTATTT+GGG 0.300184 6:-16105792 MsG0680031214.01.T01:CDS
GAGCTTGTAGTGGATCTATC+TGG 0.303761 6:-16104533 MsG0680031214.01.T01:CDS
TCAAAGTCAACAGTTTGATT+TGG 0.305707 6:+16102786 None:intergenic
ATAACAATGGTAAGGCATTC+TGG 0.307965 6:-16101317 MsG0680031214.01.T01:CDS
ACCTAGTGAATTCAGCTTCC+CGG 0.316117 6:+16105765 None:intergenic
GATGCAGATTGACCAAATAT+TGG 0.317390 6:-16100880 MsG0680031214.01.T01:three_prime_UTR
CCCGTTTCAGAATTTGCTTT+TGG 0.321715 6:+16103744 None:intergenic
CGAATCTATGATTCTGCTAA+TGG 0.326535 6:-16108139 MsG0680031214.01.T01:CDS
GCCACAAGTGCCTGTTGAAC+AGG 0.338901 6:-16106470 MsG0680031214.01.T01:intron
ATGCAGATTGACCAAATATT+GGG 0.341380 6:-16100879 MsG0680031214.01.T01:three_prime_UTR
TTAGAATTCTGCAGATTGTT+TGG 0.349053 6:-16103433 MsG0680031214.01.T01:CDS
AAAGAAAGCAGCAAAGTCTA+AGG 0.350593 6:-16102276 MsG0680031214.01.T01:CDS
GCTTGTAAGCATCCAAGAAC+TGG 0.362440 6:-16106516 MsG0680031214.01.T01:CDS
CTGTAATATTTGTAATAGTA+AGG 0.362953 6:-16100902 MsG0680031214.01.T01:three_prime_UTR
AGTGAAGCGGGAAAACTTAA+AGG 0.370001 6:-16103862 MsG0680031214.01.T01:CDS
AATTAGTTACCATTTGTAAC+TGG 0.377031 6:-16100939 MsG0680031214.01.T01:three_prime_UTR
CACAAGAACTGAACGTGAAT+GGG 0.378164 6:-16108225 MsG0680031214.01.T01:CDS
CATAAGTGGATATTATGATT+TGG 0.388807 6:-16102497 MsG0680031214.01.T01:CDS
GTAGATCTATTTGGGGAAAC+CGG 0.389454 6:-16105784 MsG0680031214.01.T01:CDS
GCAAAAGCTGTTGTATCAAA+TGG 0.390668 6:-16102097 MsG0680031214.01.T01:CDS
ACATTTCATCTAGGAGAGAT+TGG 0.394349 6:-16101072 MsG0680031214.01.T01:CDS
AATGCATTCCCAACATCTTC+TGG 0.397485 6:+16103463 None:intergenic
CCAAAAGCAAATTCTGAAAC+GGG 0.403615 6:-16103744 MsG0680031214.01.T01:CDS
GAGAATCGAGCCGGAGTACT+TGG 0.407702 6:-16101340 MsG0680031214.01.T01:CDS
AAAGTTAAAGGAAGCTACTC+TGG 0.410652 6:-16104760 MsG0680031214.01.T01:CDS
AAAGTTAAAGGAAGCTACTC+TGG 0.410652 6:-16105065 MsG0680031214.01.T01:CDS
AGGATTACCTTGTAACATAT+AGG 0.410945 6:+16101266 None:intergenic
GTGGATCTATCTGGGGAACC+TGG 0.413007 6:-16104524 MsG0680031214.01.T01:CDS
AAGTCTTAAGCAAAAGTTGC+AGG 0.414891 6:-16102128 MsG0680031214.01.T01:CDS
CCTACTGAATTCTGCTTCCC+AGG 0.418681 6:+16104506 None:intergenic
ATAAACCAAACCTGTTCAAC+AGG 0.421109 6:+16106460 None:intergenic
TAGGTTTAAAGGTTGAAAAT+GGG 0.423216 6:-16105453 MsG0680031214.01.T01:CDS
GAAACTACATTAGAAAGTTT+AGG 0.426474 6:+16103783 None:intergenic
TAGCAGGTTGAAGTCAGCTT+TGG 0.429807 6:+16101046 None:intergenic
GTTCATTCAGCCAAGGCATC+CGG 0.432115 6:-16106094 MsG0680031214.01.T01:CDS
TTGCAAATGCCTCTGCACTT+TGG 0.438657 6:+16106263 None:intergenic
AAGCTACTAAAATGTAATGA+AGG 0.441155 6:-16101013 MsG0680031214.01.T01:three_prime_UTR
AGGTAGAACTATTGAATGAT+TGG 0.447488 6:-16106292 MsG0680031214.01.T01:CDS
GCCTGTAAAGGAAGCTACTC+TGG 0.449925 6:-16105999 MsG0680031214.01.T01:CDS
GAGCTTGTAGTGGATCTATC+CGG 0.450636 6:-16105208 MsG0680031214.01.T01:CDS
AGTTTGCACCAGAAGATGTT+GGG 0.451171 6:-16103471 MsG0680031214.01.T01:CDS
AATTCAGTAGGTGAAAATAT+AGG 0.451590 6:-16105130 MsG0680031214.01.T01:CDS
TGATAGAGACAAGACTCCTT+AGG 0.453765 6:-16100971 MsG0680031214.01.T01:three_prime_UTR
TATACTACAGGAGGTTGTCT+TGG 0.454756 6:-16103964 MsG0680031214.01.T01:CDS
CCTACTGAATTCTGCTTCAC+AGG 0.454987 6:+16105484 None:intergenic
AGGTGGAGTTGGTGCTTCAA+AGG 0.454999 6:-16103907 MsG0680031214.01.T01:CDS
AGCTTGTAGTGGATCTATCC+AGG 0.459153 6:-16104863 MsG0680031214.01.T01:CDS
GAAAACATAGGTTTAAAGGT+TGG 0.464712 6:-16104482 MsG0680031214.01.T01:CDS
TTTATTTGTGATGAAGCCTT+GGG 0.467960 6:-16102445 MsG0680031214.01.T01:CDS
TCACAAGAACTGAACGTGAA+TGG 0.468949 6:-16108226 MsG0680031214.01.T01:CDS
TAAAAGAATTTCCGTCGGAT+TGG 0.472570 6:-16102531 MsG0680031214.01.T01:CDS
TTAATAAGTACATTTCATCT+AGG 0.474596 6:-16101081 MsG0680031214.01.T01:CDS
ACCAAAAGCAAATTCTGAAA+CGG 0.474696 6:-16103745 MsG0680031214.01.T01:CDS
TTTACCATTTGTCTGGGACT+TGG 0.476747 6:+16103570 None:intergenic
CCTACTGAATTCTGCTTCGT+AGG 0.480730 6:+16104837 None:intergenic
GGAGTTGGTGCTTCAAAGGT+TGG 0.480973 6:-16103903 MsG0680031214.01.T01:CDS
GTCTAAGGTTTCTGAAGCTA+AGG 0.481278 6:-16102261 MsG0680031214.01.T01:CDS
CGAATGGAAAGAAATTGAAT+CGG 0.487436 6:-16108195 MsG0680031214.01.T01:CDS
TTGGGTCTATCAAGTGAACC+TGG 0.487801 6:-16103945 MsG0680031214.01.T01:CDS
TGCTCAGGAACTGTTGTGAT+AGG 0.488259 6:-16103613 MsG0680031214.01.T01:intron
TAATGGCAAAACTTGTCATC+AGG 0.489532 6:-16108122 MsG0680031214.01.T01:intron
AAAGGAAGATACTCTGGAAA+AGG 0.490343 6:-16105401 MsG0680031214.01.T01:intron
AAAGTTAAAGGAAGATACTC+TGG 0.491926 6:-16105407 MsG0680031214.01.T01:CDS
ATACTACAGGAGGTTGTCTT+GGG 0.492173 6:-16103963 MsG0680031214.01.T01:CDS
TAGCTTTAAATATTTCTAGC+AGG 0.492331 6:+16101030 None:intergenic
TGGCTTAATAAAGGCATAAG+TGG 0.493521 6:-16102511 MsG0680031214.01.T01:CDS
ATTCTGCTTCGTAGGTTCCC+TGG 0.496316 6:+16104845 None:intergenic
AGCTTGTAGTGGATCTATCT+GGG 0.497046 6:-16104532 MsG0680031214.01.T01:CDS
AGCTTGTAGTGGATCTATCT+GGG 0.497046 6:-16105510 MsG0680031214.01.T01:CDS
CCTGGGAAAGAAAACTCCTT+AGG 0.498484 6:-16103927 MsG0680031214.01.T01:CDS
CAAAAGAAACCAGTTACAAA+TGG 0.498560 6:+16100930 None:intergenic
AGAGTTGAAACCGGATGCCT+TGG 0.498717 6:+16106084 None:intergenic
ACCGAGTTGGTTGAGGCAAA+AGG 0.498720 6:-16102004 MsG0680031214.01.T01:CDS
AAAGGAAGCTACTCTGGAAA+AGG 0.499075 6:-16105993 MsG0680031214.01.T01:intron
AGCTTGTAGTGGATCTATCC+GGG 0.501781 6:-16105207 MsG0680031214.01.T01:CDS
TGCTGACACAGAGTTGAAAC+CGG 0.505301 6:+16106075 None:intergenic
AATTCAGTAGGTGAAAATAT+AGG 0.505670 6:-16105169 MsG0680031214.01.T01:CDS
ATATGGTGAGAAGGCAGAAG+AGG 0.508169 6:-16106312 MsG0680031214.01.T01:CDS
GGTTTCTGAAGCTAAGGAAA+AGG 0.511109 6:-16102255 MsG0680031214.01.T01:intron
TTGATATATTCAGGAAGCTA+AGG 0.515389 6:-16102337 MsG0680031214.01.T01:intron
CTTTCTAATGTAGTTTCAGA+GGG 0.522769 6:-16103777 MsG0680031214.01.T01:CDS
GAAAACTCCTTAGGTGGAGT+TGG 0.525493 6:-16103918 MsG0680031214.01.T01:CDS
GATTTGGAACTCAACCACTA+AGG 0.525815 6:+16102802 None:intergenic
GGTGCCAAGTCCCAGACAAA+TGG 0.526799 6:-16103574 MsG0680031214.01.T01:CDS
TTCTCACTGCATCACAATGT+TGG 0.527421 6:+16101358 None:intergenic
TAGATCTATTTGGGGAAACC+GGG 0.529177 6:-16105783 MsG0680031214.01.T01:CDS
GAGTTTGCACCAGAAGATGT+TGG 0.533090 6:-16103472 MsG0680031214.01.T01:CDS
AATTCAGTAGGTGGAAACAT+AGG 0.535188 6:-16105472 MsG0680031214.01.T01:CDS
ACTAATTACATTGAAACCTA+AGG 0.535283 6:+16100955 None:intergenic
GTCAGCAATGCTTAGAAAGA+AGG 0.535931 6:-16106059 MsG0680031214.01.T01:CDS
AGCTCATACCGAGTTGGTTG+AGG 0.535974 6:-16102011 MsG0680031214.01.T01:CDS
TGGCAGAACTTAATTTGGCA+AGG 0.536819 6:+16106489 None:intergenic
TGGAGCTGAGCAGAAGGATG+AGG 0.539326 6:-16101104 MsG0680031214.01.T01:CDS
AACCAAGAAAGTGACGGAAA+AGG 0.541227 6:-16105710 MsG0680031214.01.T01:intron
AAAGGAAGCTACTCTGGGAA+AGG 0.544797 6:-16104754 MsG0680031214.01.T01:intron
AAAGGAAGCTACTCTGGGAA+AGG 0.544797 6:-16105059 MsG0680031214.01.T01:intron
ATCATCAACACTGTTGCCAT+TGG 0.546992 6:+16103833 None:intergenic
TAGGCTCTTGATGTCAAGAA+AGG 0.547393 6:-16102887 MsG0680031214.01.T01:CDS
ACTTTCTAATGTAGTTTCAG+AGG 0.558234 6:-16103778 MsG0680031214.01.T01:CDS
TGGATCTATCTGGGGAACCT+GGG 0.558717 6:-16104523 MsG0680031214.01.T01:CDS
ACGTGGACAAAACACCTTAG+TGG 0.560975 6:-16102816 MsG0680031214.01.T01:CDS
ACCTGTTCAACAGGCACTTG+TGG 0.561037 6:+16106469 None:intergenic
TATATTTCAGGAGCTTGTAG+TGG 0.563462 6:-16104543 MsG0680031214.01.T01:intron
TATATTTCAGGAGCTTGTAG+TGG 0.563462 6:-16104874 MsG0680031214.01.T01:intron
TATATTTCAGGAGCTTGTAG+TGG 0.563462 6:-16105218 MsG0680031214.01.T01:intron
AAAGGAAACTACTCTAGGAA+AGG 0.563977 6:-16104423 MsG0680031214.01.T01:intron
GAAAACCAAGAAAGTGAAGC+GGG 0.567532 6:-16103874 MsG0680031214.01.T01:CDS
TGAAGCACCAACTCCACCTA+AGG 0.568130 6:+16103911 None:intergenic
GTACTTGGATAACAATGGTA+AGG 0.570868 6:-16101325 MsG0680031214.01.T01:CDS
GAATATGCCTATATGTTACA+AGG 0.571950 6:-16101273 MsG0680031214.01.T01:intron
AGCTACTAAAATGTAATGAA+GGG 0.574935 6:-16101012 MsG0680031214.01.T01:three_prime_UTR
TGTTTATGGAGCTGAGCAGA+AGG 0.575038 6:-16101110 MsG0680031214.01.T01:CDS
AGAAAACCAAGAAAGTGAAG+CGG 0.576898 6:-16103875 MsG0680031214.01.T01:CDS
CCGGAGGGAGTATATACTAC+AGG 0.578255 6:-16103976 MsG0680031214.01.T01:CDS
AAGTTAAAGGAAACTACTCT+AGG 0.578905 6:-16104428 MsG0680031214.01.T01:CDS
CTTGTAAGCATCCAAGAACT+GGG 0.580817 6:-16106515 MsG0680031214.01.T01:CDS
AAGTTAAAGGAAGCTACTCT+GGG 0.583380 6:-16104759 MsG0680031214.01.T01:CDS
AAGTTAAAGGAAGCTACTCT+GGG 0.583380 6:-16105064 MsG0680031214.01.T01:CDS
AAAAGAGGTGAACAACCTAC+TGG 0.584751 6:-16106124 MsG0680031214.01.T01:CDS
CATCACAAATAAAATTCAGA+AGG 0.585281 6:+16102455 None:intergenic
TGAATTTAGATATGGTGAGA+AGG 0.586700 6:-16106321 MsG0680031214.01.T01:intron
CCTGTAGTATATACTCCCTC+CGG 0.586773 6:+16103976 None:intergenic
AAATACTTACATCGTGCCCA+AGG 0.591448 6:+16102429 None:intergenic
CCTATGAAGCAGAATTCAGT+AGG 0.595536 6:-16105142 MsG0680031214.01.T01:CDS
AGCTAAAGCTCATACCGAGT+TGG 0.595550 6:-16102017 MsG0680031214.01.T01:CDS
AATTCAGTAGGTGAAAACAT+AGG 0.596996 6:-16104494 MsG0680031214.01.T01:CDS
AATTCAGTAGGTGAAAACAT+AGG 0.596996 6:-16104825 MsG0680031214.01.T01:CDS
ATTCTGCAGATTGTTTGGAA+AGG 0.597032 6:-16103428 MsG0680031214.01.T01:intron
GGGAAAGAAAACTCCTTAGG+TGG 0.598078 6:-16103924 MsG0680031214.01.T01:CDS
TATAATACAGGAGCTTGTAG+TGG 0.603396 6:-16105521 MsG0680031214.01.T01:intron
ATAGGAGATGGTGACAATGC+TGG 0.603532 6:-16103595 MsG0680031214.01.T01:CDS
ATTCTGCTTCATAGGCTCCC+CGG 0.604419 6:+16105189 None:intergenic
ACAAGAACTGAACGTGAATG+GGG 0.604646 6:-16108224 MsG0680031214.01.T01:CDS
TGATGCAGTGAGAATCGAGC+CGG 0.604885 6:-16101349 MsG0680031214.01.T01:CDS
CATCGTGTTCTGAAATTGAG+AGG 0.604942 6:+16102068 None:intergenic
AACTTAAAGGAAATATCCAA+TGG 0.606792 6:-16103849 MsG0680031214.01.T01:CDS
TTATATAATACAGGAGCTTG+TGG 0.607271 6:-16105806 MsG0680031214.01.T01:intron
TTGAAATTGAAATGAAGTAG+CGG 0.609746 6:+16108326 None:intergenic
TTCTTATAAATAAGGACCGG+AGG 0.613080 6:-16103992 MsG0680031214.01.T01:intron
TCAGCCATAACTGCTAGCAA+TGG 0.613966 6:-16102610 MsG0680031214.01.T01:CDS
CCTGGGAAGCAGAATTCAGT+AGG 0.614086 6:-16104506 MsG0680031214.01.T01:CDS
CCTGTGAAGCAGAATTCAGT+AGG 0.614867 6:-16105484 MsG0680031214.01.T01:CDS
CCTATGAAGCAGAATTCAGT+AGG 0.617306 6:-16105181 MsG0680031214.01.T01:CDS
AATTCACTAGGTGGAAACAA+AGG 0.618686 6:-16105754 MsG0680031214.01.T01:CDS
CCATTGTTATCCAAGTACTC+CGG 0.619911 6:+16101330 None:intergenic
ATGAAGATCCGTGATGAAGA+TGG 0.620123 6:-16101157 MsG0680031214.01.T01:CDS
TCTTATAAATAAGGACCGGA+GGG 0.621106 6:-16103991 MsG0680031214.01.T01:intron
CCTACGAAGCAGAATTCAGT+AGG 0.624175 6:-16104837 MsG0680031214.01.T01:CDS
TTTGGAATCGAACAATGCTG+TGG 0.625301 6:-16106026 MsG0680031214.01.T01:CDS
TGAGAAAACCAAGAAAGTGA+CGG 0.630755 6:-16105716 MsG0680031214.01.T01:CDS
AGAAAACCAAGACAATGAAG+CGG 0.634544 6:-16104785 MsG0680031214.01.T01:CDS
AGAAAACCAAGACAATGAAG+CGG 0.634544 6:-16105090 MsG0680031214.01.T01:CDS
GCTTGTAGTGGATCTATCCA+GGG 0.637847 6:-16104862 MsG0680031214.01.T01:CDS
ACCGGGAAGCTGAATTCACT+AGG 0.643409 6:-16105766 MsG0680031214.01.T01:CDS
TGGGTCTATCAAGTGAACCT+GGG 0.644898 6:-16103944 MsG0680031214.01.T01:CDS
GGAACTGTTGTGATAGGAGA+TGG 0.646822 6:-16103607 MsG0680031214.01.T01:CDS
CCGGAGTACTTGGATAACAA+TGG 0.653215 6:-16101330 MsG0680031214.01.T01:CDS
TGCAGATTGACCAAATATTG+GGG 0.654821 6:-16100878 MsG0680031214.01.T01:three_prime_UTR
TGTACTAAAAGAATTTCCGT+CGG 0.654987 6:-16102536 MsG0680031214.01.T01:CDS
TATACTAGTTCATTCAGCCA+AGG 0.657723 6:-16106101 MsG0680031214.01.T01:CDS
GTGAAGCAGAATTCAGTAGG+TGG 0.658777 6:-16105481 MsG0680031214.01.T01:CDS
CTTCAACACCATCTTCATCA+CGG 0.662840 6:+16101149 None:intergenic
GAATGAACTAGTATACCAGT+AGG 0.672480 6:+16106109 None:intergenic
CCTTTATTAAGCCAATCCGA+CGG 0.674604 6:+16102520 None:intergenic
GGAAAACCAAGACAATGAAG+CGG 0.677635 6:-16105432 MsG0680031214.01.T01:CDS
TTGAATCGGAACAATAAATG+CGG 0.678075 6:-16108181 MsG0680031214.01.T01:CDS
CAAAAGCAAATTCTGAAACG+GGG 0.680931 6:-16103743 MsG0680031214.01.T01:CDS
GCTTGTAGTGGATCTATCTG+GGG 0.681442 6:-16104531 MsG0680031214.01.T01:CDS
GCTTGTAGTGGATCTATCTG+GGG 0.681442 6:-16105509 MsG0680031214.01.T01:CDS
CGTAAGCAAAATTTGCGACG+TGG 0.687278 6:-16102833 MsG0680031214.01.T01:CDS
CAAGAACTGAACGTGAATGG+GGG 0.690733 6:-16108223 MsG0680031214.01.T01:CDS
GCTTGTGGTAGATCTATTTG+GGG 0.695308 6:-16105791 MsG0680031214.01.T01:CDS
GCTTGTAGTGGATCTATCCG+GGG 0.696437 6:-16105206 MsG0680031214.01.T01:CDS
GAGGGAGTATATACTACAGG+AGG 0.700923 6:-16103973 MsG0680031214.01.T01:CDS
TGGATGTGCCCAAAGTGCAG+AGG 0.714972 6:-16106272 MsG0680031214.01.T01:CDS
TTGTCATCTCAGTGCCAAGG+GGG 0.718267 6:+16103509 None:intergenic
GGGAAGCTGAATTCACTAGG+TGG 0.722903 6:-16105763 MsG0680031214.01.T01:CDS
TTTGTCATCTCAGTGCCAAG+GGG 0.736357 6:+16103508 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATATTTTAAATTATTAT+TGG - Chr6:16101554-16101573 MsG0680031214.01.T01:intron 0.0%
!! AAAAGAAAAAATCAATTAAA+TGG + Chr6:16106131-16106150 None:intergenic 10.0%
!!! GAAAATTTTCAATTTTTTTT+TGG - Chr6:16104962-16104981 MsG0680031214.01.T01:intron 10.0%
!!! TTGAAAATTTTCTTATATAT+AGG + Chr6:16104954-16104973 None:intergenic 10.0%
!! AAAAATTATCCAAAAATAAC+CGG + Chr6:16106537-16106556 None:intergenic 15.0%
!! AAAAGACAAACATTAAATAA+AGG + Chr6:16105051-16105070 None:intergenic 15.0%
!! AAAGACAAACATTAAATAAA+GGG + Chr6:16105050-16105069 None:intergenic 15.0%
!! ATTGCATGATATTAAAAAAA+TGG + Chr6:16106069-16106088 None:intergenic 15.0%
!! TCAACAAAAAAATGAAAATA+AGG + Chr6:16101392-16101411 None:intergenic 15.0%
!! TGAAATTGATTAAAAATTAG+AGG + Chr6:16107244-16107263 None:intergenic 15.0%
!! TTGAATTAAATTAAATTCTC+TGG - Chr6:16106154-16106173 MsG0680031214.01.T01:intron 15.0%
!!! AATGTTTGTCTTTTTAATAT+TGG - Chr6:16105057-16105076 MsG0680031214.01.T01:intron 15.0%
!!! ATAACCATTATTAATTTGAT+CGG + Chr6:16106026-16106045 None:intergenic 15.0%
!!! TCATATTTGTTATATATTTC+AGG - Chr6:16103947-16103966 MsG0680031214.01.T01:CDS 15.0%
!!! TGTGATATTTTCTTATAAAT+AGG + Chr6:16104989-16105008 None:intergenic 15.0%
!!! TTTATCACTTCATTTTTTAA+GGG - Chr6:16106474-16106493 MsG0680031214.01.T01:CDS 15.0%
!!! TTTGGTTTTTCTTATAAATA+AGG - Chr6:16105177-16105196 MsG0680031214.01.T01:CDS 15.0%
!!! TTTTAAATTATTATTGGTGT+TGG - Chr6:16101560-16101579 MsG0680031214.01.T01:intron 15.0%
!! AATAAGAAAAGACATGAAAA+AGG + Chr6:16102449-16102468 None:intergenic 20.0%
!! AATAATGGTTATGCTATAAT+TGG - Chr6:16106034-16106053 MsG0680031214.01.T01:CDS 20.0%
!! AGACTATTATTCATAAGTAA+AGG + Chr6:16106790-16106809 None:intergenic 20.0%
!! ATAATGGTTATGCTATAATT+GGG - Chr6:16106035-16106054 MsG0680031214.01.T01:CDS 20.0%
!! ATAATGTATTGAACTGATAA+TGG - Chr6:16102173-16102192 MsG0680031214.01.T01:intron 20.0%
!! ATCAATCATAAAAACTACTA+TGG + Chr6:16103339-16103358 None:intergenic 20.0%
!! ATGATTTATAGTAAGATAGA+TGG - Chr6:16105481-16105500 MsG0680031214.01.T01:CDS 20.0%
!! CTAGTAATAATTCAAGAAAA+TGG + Chr6:16101634-16101653 None:intergenic 20.0%
!! CTGTAATATTTGTAATAGTA+AGG - Chr6:16108275-16108294 MsG0680031214.01.T01:exon 20.0%
!! CTTATTTACAAAATCGATTA+TGG - Chr6:16100902-16100921 MsG0680031214.01.T01:three_prime_UTR 20.0%
!! GACTATTATTCATAAGTAAA+GGG + Chr6:16106789-16106808 None:intergenic 20.0%
!! GATTAAAAATTAGAGGATAT+AGG + Chr6:16107237-16107256 None:intergenic 20.0%
!! GTAAAATTAAGAAGTAACAA+AGG - Chr6:16101805-16101824 MsG0680031214.01.T01:intron 20.0%
!! TCATATCTGTTATATAATAC+AGG - Chr6:16103644-16103663 MsG0680031214.01.T01:intron 20.0%
!! TGAAAAAAAAAATCGATAGT+TGG - Chr6:16107366-16107385 MsG0680031214.01.T01:intron 20.0%
!! TGAAAATCAATCATAAAACT+TGG + Chr6:16104581-16104600 None:intergenic 20.0%
!! TGATAAACAAAAAGTGAAAT+GGG + Chr6:16106461-16106480 None:intergenic 20.0%
!! TTAATAAGTACATTTCATCT+AGG - Chr6:16108096-16108115 MsG0680031214.01.T01:intron 20.0%
!! TTTCAATAGAATATATGAAG+AGG + Chr6:16103565-16103584 None:intergenic 20.0%
!! TTTGCATGAAGAAAAAATTA+AGG - Chr6:16105632-16105651 MsG0680031214.01.T01:intron 20.0%
!!! AAATTTCTTTGATAGTTTGT+AGG - Chr6:16102402-16102421 MsG0680031214.01.T01:intron 20.0%
!!! AATTTCTTTGATAGTTTGTA+GGG - Chr6:16102403-16102422 MsG0680031214.01.T01:intron 20.0%
!!! AGAATTTGCTTTAATTAACT+TGG + Chr6:16102018-16102037 None:intergenic 20.0%
!!! ATTTTGTAAATAAGCGATTT+TGG + Chr6:16100896-16100915 None:intergenic 20.0%
!!! CATACTTTGTTATATAATAC+AGG - Chr6:16103362-16103381 MsG0680031214.01.T01:intron 20.0%
!!! GAATTTGCTTTAATTAACTT+GGG + Chr6:16102017-16102036 None:intergenic 20.0%
!!! GTTTATCACTTCATTTTTTA+AGG - Chr6:16106473-16106492 MsG0680031214.01.T01:CDS 20.0%
!!! TGTTTGATGGTTAATTAATA+AGG - Chr6:16103256-16103275 MsG0680031214.01.T01:intron 20.0%
!!! TGTTTTCAATTAACATTTGT+TGG - Chr6:16108327-16108346 MsG0680031214.01.T01:five_prime_UTR 20.0%
!!! TTTGTCTTTTTAATATTGGT+GGG - Chr6:16105061-16105080 MsG0680031214.01.T01:CDS 20.0%
!!! TTTGTTTTTGATGGTTAATA+AGG - Chr6:16103537-16103556 MsG0680031214.01.T01:CDS 20.0%
!!! TTTGTTTTTTGTTTTTGGAT+TGG - Chr6:16106966-16106985 MsG0680031214.01.T01:intron 20.0%
!!! TTTTGTAAATAAGCGATTTT+GGG + Chr6:16100895-16100914 None:intergenic 20.0%
!!! TTTTTCTTATAAATAAGGAC+CGG - Chr6:16105182-16105201 MsG0680031214.01.T01:CDS 20.0%
!!! TTTTTGGATAATTTTTGTGT+AGG - Chr6:16106541-16106560 MsG0680031214.01.T01:CDS 20.0%
!!! TTTTTGTTGATTTGATTCAA+GGG - Chr6:16101402-16101421 MsG0680031214.01.T01:intron 20.0%
!!! TTTTTTGTTGATTTGATTCA+AGG - Chr6:16101401-16101420 MsG0680031214.01.T01:intron 20.0%
! AAACATTATACCCCAATATT+TGG + Chr6:16108312-16108331 None:intergenic 25.0%
! AAATTAAGAAGTAACAAAGG+TGG - Chr6:16101808-16101827 MsG0680031214.01.T01:intron 25.0%
! AACTTAAAGGAAATATCCAA+TGG - Chr6:16105328-16105347 MsG0680031214.01.T01:intron 25.0%
! AAGCTACTAAAATGTAATGA+AGG - Chr6:16108164-16108183 MsG0680031214.01.T01:CDS 25.0%
! AATTAAGAAGTAACAAAGGT+GGG - Chr6:16101809-16101828 MsG0680031214.01.T01:intron 25.0%
! AATTAGTTACCATTTGTAAC+TGG - Chr6:16108238-16108257 MsG0680031214.01.T01:CDS 25.0%
! AATTCAGTAGGTGAAAATAT+AGG - Chr6:16104008-16104027 MsG0680031214.01.T01:intron 25.0%
! ACACTAATTAATGAGTGTAT+TGG - Chr6:16105143-16105162 MsG0680031214.01.T01:CDS 25.0%
! ACTAATTACATTGAAACCTA+AGG + Chr6:16108225-16108244 None:intergenic 25.0%
! ACTGTTACATCTGTTTAATA+TGG - Chr6:16106224-16106243 MsG0680031214.01.T01:intron 25.0%
! AGACAGTGTAATACTAATAA+TGG + Chr6:16107397-16107416 None:intergenic 25.0%
! AGCTACTAAAATGTAATGAA+GGG - Chr6:16108165-16108184 MsG0680031214.01.T01:CDS 25.0%
! AGGTGAAAATATAGGTTTAA+AGG - Chr6:16104055-16104074 MsG0680031214.01.T01:intron 25.0%
! AGTTAGATTTACTTTGCAAT+TGG - Chr6:16106105-16106124 MsG0680031214.01.T01:CDS 25.0%
! ATAGGTTTAAAGGTTGAAAA+TGG - Chr6:16103723-16103742 MsG0680031214.01.T01:CDS 25.0%
! ATTCAACACACAAATATCAT+CGG + Chr6:16102841-16102860 None:intergenic 25.0%
! CATAAGTGGATATTATGATT+TGG - Chr6:16106680-16106699 MsG0680031214.01.T01:intron 25.0%
! CATCACAAATAAAATTCAGA+AGG + Chr6:16106725-16106744 None:intergenic 25.0%
! CTTCAATATTAATTGAACTG+AGG - Chr6:16101780-16101799 MsG0680031214.01.T01:intron 25.0%
! GAAACTACATTAGAAAGTTT+AGG + Chr6:16105397-16105416 None:intergenic 25.0%
! GTGATAAACAAAAAGTGAAA+TGG + Chr6:16106462-16106481 None:intergenic 25.0%
! TAACCTTATAGGAAAAAAAG+AGG - Chr6:16103038-16103057 MsG0680031214.01.T01:intron 25.0%
! TAGGTTTAAAGGTTGAAAAT+GGG - Chr6:16103724-16103743 MsG0680031214.01.T01:CDS 25.0%
! TATCTTCTGTTAACATTGTA+GGG - Chr6:16107794-16107813 MsG0680031214.01.T01:intron 25.0%
! TATGCAAATGAAACTAATGA+TGG - Chr6:16103290-16103309 MsG0680031214.01.T01:intron 25.0%
! TATTAGTATTACACTGTCTA+TGG - Chr6:16107398-16107417 MsG0680031214.01.T01:intron 25.0%
! TATTCTATTGAAACCAAAGA+TGG - Chr6:16103572-16103591 MsG0680031214.01.T01:CDS 25.0%
! TGACATGATATTGATATGTA+TGG - Chr6:16101516-16101535 MsG0680031214.01.T01:intron 25.0%
! TTATCTTCTGTTAACATTGT+AGG - Chr6:16107793-16107812 MsG0680031214.01.T01:intron 25.0%
! TTCTCCGATCAAATTAATAA+TGG - Chr6:16106019-16106038 MsG0680031214.01.T01:CDS 25.0%
! TTCTTATATATAGGACTGAA+GGG + Chr6:16104945-16104964 None:intergenic 25.0%
! TTGAAATTGAAATGAAGTAG+CGG + Chr6:16100854-16100873 None:intergenic 25.0%
! TTGCAAAGTAAATCTAACTA+AGG + Chr6:16106104-16106123 None:intergenic 25.0%
! TTGTGTGTTGAATTTAGATA+TGG - Chr6:16102848-16102867 MsG0680031214.01.T01:CDS 25.0%
! TTTCTTATATATAGGACTGA+AGG + Chr6:16104946-16104965 None:intergenic 25.0%
! TTTGTGTGAATCTGATTAAT+GGG - Chr6:16102265-16102284 MsG0680031214.01.T01:CDS 25.0%
!! AAAAACAAAGCAAGATTTTG+TGG + Chr6:16106955-16106974 None:intergenic 25.0%
!! AAAAGAAATTTTTCCGAGTT+TGG - Chr6:16101193-16101212 MsG0680031214.01.T01:intron 25.0%
!! CAAAATTTTACCATTTGTCT+GGG + Chr6:16105616-16105635 None:intergenic 25.0%
!! CTTTGTTATAGTTTGTAGAA+TGG - Chr6:16102506-16102525 MsG0680031214.01.T01:CDS 25.0%
!! GTTTGTCTTTTTAATATTGG+TGG - Chr6:16105060-16105079 MsG0680031214.01.T01:CDS 25.0%
!! TCTAATATCAAGAAGTATGT+TGG + Chr6:16105999-16106018 None:intergenic 25.0%
!! TTGAATTCTTTTAGTGCTAT+TGG - Chr6:16105893-16105912 MsG0680031214.01.T01:intron 25.0%
!! TTGATTTGATTCAGCTTATA+AGG - Chr6:16101124-16101143 MsG0680031214.01.T01:CDS 25.0%
!! TTTATCCTGTTTAAAGTTGT+TGG - Chr6:16106809-16106828 MsG0680031214.01.T01:intron 25.0%
!! TTTGTAAATAAGCGATTTTG+GGG + Chr6:16100894-16100913 None:intergenic 25.0%
!! TTTTGTGTGAATCTGATTAA+TGG - Chr6:16102264-16102283 MsG0680031214.01.T01:CDS 25.0%
!! TTTTTACTTGTTCACAACTT+AGG + Chr6:16107332-16107351 None:intergenic 25.0%
!!! AGTGATTTTTTGCTTCTTTT+AGG - Chr6:16105951-16105970 MsG0680031214.01.T01:intron 25.0%
!!! ATGCTTCACAATTTTTTATG+AGG - Chr6:16105092-16105111 MsG0680031214.01.T01:CDS 25.0%
!!! CTTGCTTTGTTTTTTGTTTT+TGG - Chr6:16106961-16106980 MsG0680031214.01.T01:intron 25.0%
!!! GATGAAAAATGGTTTGTTTA+TGG - Chr6:16108053-16108072 MsG0680031214.01.T01:intron 25.0%
!!! GTATTGGTTTTGATGTTTTT+TGG - Chr6:16105159-16105178 MsG0680031214.01.T01:CDS 25.0%
!!! GTTAAGCTAATTTTGTTTTG+AGG + Chr6:16107934-16107953 None:intergenic 25.0%
!!! TAAGTCAACTTTGTTTTTGA+TGG - Chr6:16103528-16103547 MsG0680031214.01.T01:CDS 25.0%
!!! TAGCTTTAAATATTTCTAGC+AGG + Chr6:16108150-16108169 None:intergenic 25.0%
!!! TATTGAACTGATAATGGATT+GGG - Chr6:16102179-16102198 MsG0680031214.01.T01:intron 25.0%
!!! TGCTTCACAATTTTTTATGA+GGG - Chr6:16105093-16105112 MsG0680031214.01.T01:CDS 25.0%
!!! TTTACTTTGTATAGTTTGCT+TGG - Chr6:16106506-16106525 MsG0680031214.01.T01:CDS 25.0%
!!! TTTAGTTGATGGGTTATATT+TGG - Chr6:16101939-16101958 MsG0680031214.01.T01:intron 25.0%
!!! TTTGATTCAAGGGTTTTTTA+TGG - Chr6:16101412-16101431 MsG0680031214.01.T01:intron 25.0%
!!! TTTTAGGTTTAGTTTGGTTT+AGG - Chr6:16105967-16105986 MsG0680031214.01.T01:intron 25.0%
AAACATCACAACATACGTTT+AGG + Chr6:16107206-16107225 None:intergenic 30.0%
AAAGTTAAAGGAAGATACTC+TGG - Chr6:16103770-16103789 MsG0680031214.01.T01:CDS 30.0%
AACAAACTGAGTTCCAATAA+AGG + Chr6:16105779-16105798 None:intergenic 30.0%
AAGTTAAAGGAAACTACTCT+AGG - Chr6:16104749-16104768 MsG0680031214.01.T01:intron 30.0%
AAGTTCCAACAACTTTAAAC+AGG + Chr6:16106817-16106836 None:intergenic 30.0%
AATGAAGCGGAAAAAGTTAA+AGG - Chr6:16103758-16103777 MsG0680031214.01.T01:CDS 30.0%
AATTCAGTAGGTGAAAACAT+AGG - Chr6:16104352-16104371 MsG0680031214.01.T01:intron 30.0%
ACAAACTGAGTTCCAATAAA+GGG + Chr6:16105778-16105797 None:intergenic 30.0%
ACTTTCTAATGTAGTTTCAG+AGG - Chr6:16105399-16105418 MsG0680031214.01.T01:intron 30.0%
AGAATCAACATGAACTTAAC+TGG + Chr6:16102592-16102611 None:intergenic 30.0%
AGGATTACCTTGTAACATAT+AGG + Chr6:16107914-16107933 None:intergenic 30.0%
AGGTAGAACTATTGAATGAT+TGG - Chr6:16102885-16102904 MsG0680031214.01.T01:CDS 30.0%
AGGTGAAAACATAGGTTTAA+AGG - Chr6:16104360-16104379 MsG0680031214.01.T01:intron 30.0%
AGTGAAGCAGAAAAAGTTAA+AGG - Chr6:16104736-16104755 MsG0680031214.01.T01:intron 30.0%
ATCAAGAGCCTAATTATACA+TGG + Chr6:16106282-16106301 None:intergenic 30.0%
ATCGATTATGGCTACTAAAA+TGG - Chr6:16100914-16100933 MsG0680031214.01.T01:three_prime_UTR 30.0%
ATGCAGATTGACCAAATATT+GGG - Chr6:16108298-16108317 MsG0680031214.01.T01:five_prime_UTR 30.0%
ATGTATGAGAAAAATTGCTC+AGG - Chr6:16105549-16105568 MsG0680031214.01.T01:intron 30.0%
ATGTGTCAACTACAGAAAAA+CGG + Chr6:16103509-16103528 None:intergenic 30.0%
CAAAAGAAACCAGTTACAAA+TGG + Chr6:16108250-16108269 None:intergenic 30.0%
CATAAGTTTACTTCGATTGA+TGG - Chr6:16103835-16103854 MsG0680031214.01.T01:CDS 30.0%
CGAATGGAAAGAAATTGAAT+CGG - Chr6:16100982-16101001 MsG0680031214.01.T01:three_prime_UTR 30.0%
CGTAAGTTTACTTTGATTGA+TGG - Chr6:16104813-16104832 MsG0680031214.01.T01:CDS 30.0%
CTTTCTAATGTAGTTTCAGA+GGG - Chr6:16105400-16105419 MsG0680031214.01.T01:intron 30.0%
GAAAACATAGGTTTAAAGGT+TGG - Chr6:16104364-16104383 MsG0680031214.01.T01:intron 30.0%
GAATATGCCTATATGTTACA+AGG - Chr6:16107904-16107923 MsG0680031214.01.T01:intron 30.0%
GAATGATACCATTGAGATTT+AGG - Chr6:16107960-16107979 MsG0680031214.01.T01:intron 30.0%
GTAGATAATGAATTGAACTG+AGG - Chr6:16102095-16102114 MsG0680031214.01.T01:CDS 30.0%
GTCTCTATCACCAAAAAAAT+TGG + Chr6:16108196-16108215 None:intergenic 30.0%
GTTTCATTTGCATACATAGA+AGG + Chr6:16103284-16103303 None:intergenic 30.0%
TCAAAGTCAACAGTTTGATT+TGG + Chr6:16106394-16106413 None:intergenic 30.0%
TGAAAGAAGAGTAACCTTAT+AGG - Chr6:16103027-16103046 MsG0680031214.01.T01:intron 30.0%
TGAATTTAGATATGGTGAGA+AGG - Chr6:16102856-16102875 MsG0680031214.01.T01:CDS 30.0%
TGCAAAGTAGTTATTATGCT+TGG - Chr6:16104902-16104921 MsG0680031214.01.T01:intron 30.0%
TGCTTCATAGGTTAAGATTA+GGG - Chr6:16101697-16101716 MsG0680031214.01.T01:intron 30.0%
TGGAATAACTGAATCTAACT+AGG + Chr6:16101614-16101633 None:intergenic 30.0%
TGTACTAAAAGAATTTCCGT+CGG - Chr6:16106641-16106660 MsG0680031214.01.T01:intron 30.0%
TGTCACAAATCAAAGTTTGT+TGG - Chr6:16105917-16105936 MsG0680031214.01.T01:intron 30.0%
TTAGAATTCTGCAGATTGTT+TGG - Chr6:16105744-16105763 MsG0680031214.01.T01:CDS 30.0%
TTATATAATACAGGAGCTTG+TGG - Chr6:16103371-16103390 MsG0680031214.01.T01:intron 30.0%
TTATCTTCTGAATCTGATCA+TGG - Chr6:16101914-16101933 MsG0680031214.01.T01:intron 30.0%
TTCAAAACCAACACACAAAA+TGG + Chr6:16103011-16103030 None:intergenic 30.0%
TTGAATCGGAACAATAAATG+CGG - Chr6:16100996-16101015 MsG0680031214.01.T01:three_prime_UTR 30.0%
TTGATATATTCAGGAAGCTA+AGG - Chr6:16106840-16106859 MsG0680031214.01.T01:intron 30.0%
TTGTGTGAATCTGATTAATG+GGG - Chr6:16102266-16102285 MsG0680031214.01.T01:CDS 30.0%
TTTATTTGTGATGAAGCCTT+GGG - Chr6:16106732-16106751 MsG0680031214.01.T01:intron 30.0%
TTTCGTTACTGAAATTATCG+CGG - Chr6:16101261-16101280 MsG0680031214.01.T01:intron 30.0%
! AAACTCATGGTTGAAAGTTT+TGG - Chr6:16106593-16106612 MsG0680031214.01.T01:intron 30.0%
! ACCAAAAGCAAATTCTGAAA+CGG - Chr6:16105432-16105451 MsG0680031214.01.T01:CDS 30.0%
! ATGTCTTTTCTTATTCTGAG+AGG - Chr6:16102454-16102473 MsG0680031214.01.T01:CDS 30.0%
! ATTCAGAAGGATAAGCTTTT+TGG + Chr6:16106712-16106731 None:intergenic 30.0%
! ATTTTTGCTTAAGCCATCTT+TGG + Chr6:16103588-16103607 None:intergenic 30.0%
! CTTTAATTAACTTGGGTCTT+AGG + Chr6:16102010-16102029 None:intergenic 30.0%
! GAACTTGCTTTGATATATTC+AGG - Chr6:16106831-16106850 MsG0680031214.01.T01:intron 30.0%
! GCAAAATTTTACCATTTGTC+TGG + Chr6:16105617-16105636 None:intergenic 30.0%
! TTTTGTACCATTTTGTGTGT+TGG - Chr6:16103001-16103020 MsG0680031214.01.T01:intron 30.0%
!! GTATTGAACTGATAATGGAT+TGG - Chr6:16102178-16102197 MsG0680031214.01.T01:intron 30.0%
!! GTGTTGAAGTTGATGAAAAA+TGG - Chr6:16108042-16108061 MsG0680031214.01.T01:intron 30.0%
!! TATAGTTTGCTTGGAATAAC+CGG - Chr6:16106515-16106534 MsG0680031214.01.T01:CDS 30.0%
!! TTGGAATAACCGGTTATTTT+TGG - Chr6:16106525-16106544 MsG0680031214.01.T01:CDS 30.0%
!! TTTTATTTGTGATGAAGCCT+TGG - Chr6:16106731-16106750 MsG0680031214.01.T01:intron 30.0%
!!! AAGGGTCATTCCAATTTTTT+TGG - Chr6:16108183-16108202 MsG0680031214.01.T01:CDS 30.0%
!!! GCTTTTTCGATTTCTTGTTT+TGG + Chr6:16105375-16105394 None:intergenic 30.0%
!!! TCACCTCTTTTTTTCCTATA+AGG + Chr6:16103044-16103063 None:intergenic 30.0%
!!! TGCTTCTTTTAGGTTTAGTT+TGG - Chr6:16105961-16105980 MsG0680031214.01.T01:intron 30.0%
!!! TTCAATATCCGTTTTGAGTT+TGG - Chr6:16102964-16102983 MsG0680031214.01.T01:intron 30.0%
!!! TTCATTTTTTAAGGGTGAGA+GGG - Chr6:16106482-16106501 MsG0680031214.01.T01:CDS 30.0%
AAAGAAAGCAGCAAAGTCTA+AGG - Chr6:16106901-16106920 MsG0680031214.01.T01:intron 35.0%
AAAGTTAAAGGAAGCTACTC+TGG - Chr6:16104112-16104131 MsG0680031214.01.T01:intron 35.0%
AACTGAATCTAACTAGGACA+CGG + Chr6:16101608-16101627 None:intergenic 35.0%
AAGTCTTAAGCAAAAGTTGC+AGG - Chr6:16107049-16107068 MsG0680031214.01.T01:intron 35.0%
AAGTTAAAGGAAGCTACTCT+GGG - Chr6:16104113-16104132 MsG0680031214.01.T01:intron 35.0%
AATTCACTAGGTGGAAACAA+AGG - Chr6:16103423-16103442 MsG0680031214.01.T01:intron 35.0%
AATTCAGTAGGTGGAAACAT+AGG - Chr6:16103705-16103724 MsG0680031214.01.T01:intron 35.0%
ACAAAAATAGGGGAGAATCA+TGG - Chr6:16105457-16105476 MsG0680031214.01.T01:CDS 35.0%
ACATTTCATCTAGGAGAGAT+TGG - Chr6:16108105-16108124 MsG0680031214.01.T01:intron 35.0%
ACTTGTGGCAGAACTTAATT+TGG + Chr6:16102696-16102715 None:intergenic 35.0%
AGAAAACCAAGAAAGTGAAG+CGG - Chr6:16105302-16105321 MsG0680031214.01.T01:intron 35.0%
AGAAAACCAAGACAATGAAG+CGG - Chr6:16104087-16104106 MsG0680031214.01.T01:intron 35.0%
AGCATAAACAACAGTGTAAC+TGG - Chr6:16102328-16102347 MsG0680031214.01.T01:intron 35.0%
AGCTTGTGGTAGATCTATTT+GGG - Chr6:16103385-16103404 MsG0680031214.01.T01:intron 35.0%
AGGTGGAAACAAAGGTTTAA+AGG - Chr6:16103431-16103450 MsG0680031214.01.T01:CDS 35.0%
AGGTGGAAACATAGGTTTAA+AGG - Chr6:16103713-16103732 MsG0680031214.01.T01:intron 35.0%
ATAAACCAAACCTGTTCAAC+AGG + Chr6:16102720-16102739 None:intergenic 35.0%
ATTAATGGGGTTTGATCAAG+GGG - Chr6:16102279-16102298 MsG0680031214.01.T01:CDS 35.0%
ATTCTGCAGATTGTTTGGAA+AGG - Chr6:16105749-16105768 MsG0680031214.01.T01:CDS 35.0%
CAGTATTTGCATGTAAGTTG+TGG - Chr6:16102940-16102959 MsG0680031214.01.T01:intron 35.0%
CATGAGTTAACTGTGTTTGA+TGG - Chr6:16103243-16103262 MsG0680031214.01.T01:intron 35.0%
CGAATCTATGATTCTGCTAA+TGG - Chr6:16101038-16101057 MsG0680031214.01.T01:exon 35.0%
CGTCAGTTTACATTGTTTGA+TGG - Chr6:16104484-16104503 MsG0680031214.01.T01:CDS 35.0%
CTAGCAATGGAAAAAACTCA+TGG - Chr6:16106580-16106599 MsG0680031214.01.T01:intron 35.0%
GAATGAACTAGTATACCAGT+AGG + Chr6:16103071-16103090 None:intergenic 35.0%
GATCATGGAGTTTAGTTGAT+GGG - Chr6:16101929-16101948 MsG0680031214.01.T01:intron 35.0%
GATGCAGATTGACCAAATAT+TGG - Chr6:16108297-16108316 MsG0680031214.01.T01:five_prime_UTR 35.0%
GATTAATGGGGTTTGATCAA+GGG - Chr6:16102278-16102297 MsG0680031214.01.T01:CDS 35.0%
GCAAAAGCTGTTGTATCAAA+TGG - Chr6:16107080-16107099 MsG0680031214.01.T01:intron 35.0%
GTACTTGGATAACAATGGTA+AGG - Chr6:16107852-16107871 MsG0680031214.01.T01:intron 35.0%
GTGCTTCATAGGTTAAGATT+AGG - Chr6:16101696-16101715 MsG0680031214.01.T01:intron 35.0%
TAAAAGAATTTCCGTCGGAT+TGG - Chr6:16106646-16106665 MsG0680031214.01.T01:intron 35.0%
TAATGGCAAAACTTGTCATC+AGG - Chr6:16101055-16101074 MsG0680031214.01.T01:CDS 35.0%
TATAATACAGGAGCTTGTAG+TGG - Chr6:16103656-16103675 MsG0680031214.01.T01:intron 35.0%
TATACTAGTTCATTCAGCCA+AGG - Chr6:16103076-16103095 MsG0680031214.01.T01:intron 35.0%
TATATTTCAGGAGCTTGTAG+TGG - Chr6:16103959-16103978 MsG0680031214.01.T01:CDS 35.0%
TCTTATAAATAAGGACCGGA+GGG - Chr6:16105186-16105205 MsG0680031214.01.T01:CDS 35.0%
TGAAATGGGATAAACTCACT+CGG + Chr6:16106447-16106466 None:intergenic 35.0%
TGAGAAAACCAAGAAAGTGA+CGG - Chr6:16103461-16103480 MsG0680031214.01.T01:CDS 35.0%
TGATCATGGAGTTTAGTTGA+TGG - Chr6:16101928-16101947 MsG0680031214.01.T01:intron 35.0%
TGATTAATGGGGTTTGATCA+AGG - Chr6:16102277-16102296 MsG0680031214.01.T01:CDS 35.0%
TGCAGATTGACCAAATATTG+GGG - Chr6:16108299-16108318 MsG0680031214.01.T01:five_prime_UTR 35.0%
TGCTATAGCCTAAATCTCAA+TGG + Chr6:16107971-16107990 None:intergenic 35.0%
TTAGGCGAACTTTGTATCTA+TGG - Chr6:16107640-16107659 MsG0680031214.01.T01:intron 35.0%
TTCGTTACTGAAATTATCGC+GGG - Chr6:16101262-16101281 MsG0680031214.01.T01:intron 35.0%
TTCTTATAAATAAGGACCGG+AGG - Chr6:16105185-16105204 MsG0680031214.01.T01:CDS 35.0%
! AAAGAAGGCTTCTGAAAGTT+TGG - Chr6:16103133-16103152 MsG0680031214.01.T01:intron 35.0%
! AAAGGAAACTACTCTAGGAA+AGG - Chr6:16104754-16104773 MsG0680031214.01.T01:intron 35.0%
! AAAGGAAGATACTCTGGAAA+AGG - Chr6:16103776-16103795 MsG0680031214.01.T01:CDS 35.0%
! ATAACAATGGTAAGGCATTC+TGG - Chr6:16107860-16107879 MsG0680031214.01.T01:intron 35.0%
! GTTCTGTACATGTTTTCTAC+AGG - Chr6:16107022-16107041 MsG0680031214.01.T01:intron 35.0%
! TGGCTTAATAAAGGCATAAG+TGG - Chr6:16106666-16106685 MsG0680031214.01.T01:intron 35.0%
! TTTTCCATTGCTAGCAGTTA+TGG + Chr6:16106574-16106593 None:intergenic 35.0%
!! AATGGAGTGTTGAAACCATA+TGG - Chr6:16107570-16107589 MsG0680031214.01.T01:intron 35.0%
!! CAAAAGCAAATTCTGAAACG+GGG - Chr6:16105434-16105453 MsG0680031214.01.T01:CDS 35.0%
!! CCAAAAGCAAATTCTGAAAC+GGG - Chr6:16105433-16105452 MsG0680031214.01.T01:CDS 35.0%
!! TCTTTTCTTATTCTGAGAGG+TGG - Chr6:16102457-16102476 MsG0680031214.01.T01:CDS 35.0%
!! TTGACTTGTGAGTGTAAGAA+CGG - Chr6:16101833-16101852 MsG0680031214.01.T01:intron 35.0%
!! TTGGAAAGGTATCCCTTTAT+TGG - Chr6:16105763-16105782 MsG0680031214.01.T01:CDS 35.0%
!! TTGGCGTGAAGTATCATTTT+CGG - Chr6:16101579-16101598 MsG0680031214.01.T01:intron 35.0%
!!! AAAAGTCCCTTGTTTTTTGC+CGG + Chr6:16102636-16102655 None:intergenic 35.0%
!!! ATTTTGGGGTTTAAGCGAAA+TGG + Chr6:16100880-16100899 None:intergenic 35.0%
!!! CTTCATTTTTTAAGGGTGAG+AGG - Chr6:16106481-16106500 MsG0680031214.01.T01:CDS 35.0%
!!! TGTAGAATGGTGTTGTTTTG+AGG - Chr6:16102519-16102538 MsG0680031214.01.T01:CDS 35.0%
!!! TTTTGGGGTTTAAGCGAAAT+GGG + Chr6:16100879-16100898 None:intergenic 35.0%
AAAAGAGGTGAACAACCTAC+TGG - Chr6:16103053-16103072 MsG0680031214.01.T01:intron 40.0%
AAATACTTACATCGTGCCCA+AGG + Chr6:16106751-16106770 None:intergenic 40.0%
AAATGCGGAGTTCGTGTTAT+TGG - Chr6:16101011-16101030 MsG0680031214.01.T01:three_prime_UTR 40.0%
AATGCATTCCCAACATCTTC+TGG + Chr6:16105717-16105736 None:intergenic 40.0%
ACAAGAACTGAACGTGAATG+GGG - Chr6:16100953-16100972 MsG0680031214.01.T01:three_prime_UTR 40.0%
AGTGAAGCGGGAAAACTTAA+AGG - Chr6:16105315-16105334 MsG0680031214.01.T01:intron 40.0%
AGTTGCTGATGAACCTTGAA+TGG - Chr6:16107552-16107571 MsG0680031214.01.T01:intron 40.0%
AGTTTGCACCAGAAGATGTT+GGG - Chr6:16105706-16105725 MsG0680031214.01.T01:intron 40.0%
ATACTACAGGAGGTTGTCTT+GGG - Chr6:16105214-16105233 MsG0680031214.01.T01:intron 40.0%
ATCATCAACACTGTTGCCAT+TGG + Chr6:16105347-16105366 None:intergenic 40.0%
ATGAAGATCCGTGATGAAGA+TGG - Chr6:16108020-16108039 MsG0680031214.01.T01:intron 40.0%
ATGTGTCTACTGCAGAACAA+TGG + Chr6:16104162-16104181 None:intergenic 40.0%
CACAAGAACTGAACGTGAAT+GGG - Chr6:16100952-16100971 MsG0680031214.01.T01:three_prime_UTR 40.0%
CACACCAATATCATACTCTC+TGG + Chr6:16107608-16107627 None:intergenic 40.0%
CCACAACACCAAACTCAAAA+CGG + Chr6:16102975-16102994 None:intergenic 40.0%
CCATTGTTATCCAAGTACTC+CGG + Chr6:16107850-16107869 None:intergenic 40.0%
CCTACTGAATTCTGCTTCAT+AGG + Chr6:16103999-16104018 None:intergenic 40.0%
CCTATGAAGCAGAATTCAGT+AGG - Chr6:16103996-16104015 MsG0680031214.01.T01:intron 40.0%
CCTTTATTAAGCCAATCCGA+CGG + Chr6:16106660-16106679 None:intergenic 40.0%
CTGAAACGGGGACAAAAATA+GGG - Chr6:16105446-16105465 MsG0680031214.01.T01:CDS 40.0%
CTTCAACACCATCTTCATCA+CGG + Chr6:16108031-16108050 None:intergenic 40.0%
CTTGTAAGCATCCAAGAACT+GGG - Chr6:16102662-16102681 MsG0680031214.01.T01:intron 40.0%
GAAAACCAAGAAAGTGAAGC+GGG - Chr6:16105303-16105322 MsG0680031214.01.T01:intron 40.0%
GAGCTTGTGGTAGATCTATT+TGG - Chr6:16103384-16103403 MsG0680031214.01.T01:intron 40.0%
GCCACTTGCCATGTATAATT+AGG - Chr6:16106271-16106290 MsG0680031214.01.T01:CDS 40.0%
GCCTAATTATACATGGCAAG+TGG + Chr6:16106275-16106294 None:intergenic 40.0%
GCTTGTGGTAGATCTATTTG+GGG - Chr6:16103386-16103405 MsG0680031214.01.T01:intron 40.0%
GGAAAACCAAGACAATGAAG+CGG - Chr6:16103745-16103764 MsG0680031214.01.T01:CDS 40.0%
GTAGATCTATTTGGGGAAAC+CGG - Chr6:16103393-16103412 MsG0680031214.01.T01:intron 40.0%
GTCAGCAATGCTTAGAAAGA+AGG - Chr6:16103118-16103137 MsG0680031214.01.T01:intron 40.0%
TAGATCTATTTGGGGAAACC+GGG - Chr6:16103394-16103413 MsG0680031214.01.T01:intron 40.0%
TAGGCTCTTGATGTCAAGAA+AGG - Chr6:16106290-16106309 MsG0680031214.01.T01:CDS 40.0%
TATACTACAGGAGGTTGTCT+TGG - Chr6:16105213-16105232 MsG0680031214.01.T01:intron 40.0%
TCACAAGAACTGAACGTGAA+TGG - Chr6:16100951-16100970 MsG0680031214.01.T01:three_prime_UTR 40.0%
TCGACTGATTGTATTGTGAC+TGG - Chr6:16107668-16107687 MsG0680031214.01.T01:intron 40.0%
TGAAACGGGGACAAAAATAG+GGG - Chr6:16105447-16105466 MsG0680031214.01.T01:CDS 40.0%
TGAGTGTAAGAACGGGAAAT+GGG - Chr6:16101841-16101860 MsG0680031214.01.T01:intron 40.0%
TGATAGAGACAAGACTCCTT+AGG - Chr6:16108206-16108225 MsG0680031214.01.T01:CDS 40.0%
TGGTTTCAACACTCCATTCA+AGG + Chr6:16107568-16107587 None:intergenic 40.0%
TTCTCACTGCATCACAATGT+TGG + Chr6:16107822-16107841 None:intergenic 40.0%
TTTGATCAAGGGGCTACAAT+TGG - Chr6:16102289-16102308 MsG0680031214.01.T01:CDS 40.0%
! AAAGGAAGCTACTCTGGAAA+AGG - Chr6:16103184-16103203 MsG0680031214.01.T01:intron 40.0%
! AACCAAGAAAGTGACGGAAA+AGG - Chr6:16103467-16103486 MsG0680031214.01.T01:CDS 40.0%
! ACTGCCAGAGAGTATGATAT+TGG - Chr6:16107601-16107620 MsG0680031214.01.T01:intron 40.0%
! ATTGTATTGTGACTGGTTGC+TGG - Chr6:16107675-16107694 MsG0680031214.01.T01:intron 40.0%
! CTTTTTCCGCTTCATTGTCT+TGG + Chr6:16103754-16103773 None:intergenic 40.0%
! CTTTTTCTGCTTCACTGTCT+TGG + Chr6:16104732-16104751 None:intergenic 40.0%
! GATTTGGAACTCAACCACTA+AGG + Chr6:16106378-16106397 None:intergenic 40.0%
! TCTGAAACGGGGACAAAAAT+AGG - Chr6:16105445-16105464 MsG0680031214.01.T01:CDS 40.0%
! TGACTTGTGAGTGTAAGAAC+GGG - Chr6:16101834-16101853 MsG0680031214.01.T01:intron 40.0%
! TGGCAGAACTTAATTTGGCA+AGG + Chr6:16102691-16102710 None:intergenic 40.0%
! TTTACCATTTGTCTGGGACT+TGG + Chr6:16105610-16105629 None:intergenic 40.0%
! TTTGGAATCGAACAATGCTG+TGG - Chr6:16103151-16103170 MsG0680031214.01.T01:intron 40.0%
! TTTTGTCATCTCAGTGCCAA+GGG + Chr6:16105673-16105692 None:intergenic 40.0%
! TTTTTGTCATCTCAGTGCCA+AGG + Chr6:16105674-16105693 None:intergenic 40.0%
!! AGCTTGTAGTGGATCTATCT+GGG - Chr6:16103667-16103686 MsG0680031214.01.T01:intron 40.0%
!! CATCGTGTTCTGAAATTGAG+AGG + Chr6:16107112-16107131 None:intergenic 40.0%
!! CCCGTTTCAGAATTTGCTTT+TGG + Chr6:16105436-16105455 None:intergenic 40.0%
!! GGTTTAGTTTGGTTTAGGTG+CGG - Chr6:16105972-16105991 MsG0680031214.01.T01:intron 40.0%
!! GGTTTCTGAAGCTAAGGAAA+AGG - Chr6:16106922-16106941 MsG0680031214.01.T01:intron 40.0%
!! GTCTAAGGTTTCTGAAGCTA+AGG - Chr6:16106916-16106935 MsG0680031214.01.T01:intron 40.0%
!! TTCTCTCCATTTTTCTGCAG+TGG - Chr6:16104458-16104477 MsG0680031214.01.T01:CDS 40.0%
!!! GGTGTGACACTTGCTATTTT+AGG - Chr6:16107622-16107641 MsG0680031214.01.T01:intron 40.0%
!!! TGCGTTTGTTTTTGAAGTGC+CGG - Chr6:16102614-16102633 MsG0680031214.01.T01:CDS 40.0%
AAGTGCCTGTTGAACAGGTT+TGG - Chr6:16102712-16102731 MsG0680031214.01.T01:intron 45.0%
ACCTAGTGAATTCAGCTTCC+CGG + Chr6:16103415-16103434 None:intergenic 45.0%
ACGTGGACAAAACACCTTAG+TGG - Chr6:16106361-16106380 MsG0680031214.01.T01:intron 45.0%
ACGTGTCCACTGCAGAAAAA+TGG + Chr6:16104467-16104486 None:intergenic 45.0%
AGCTAAAGCTCATACCGAGT+TGG - Chr6:16107160-16107179 MsG0680031214.01.T01:intron 45.0%
ATAGGAGATGGTGACAATGC+TGG - Chr6:16105582-16105601 MsG0680031214.01.T01:intron 45.0%
ATATGGTGAGAAGGCAGAAG+AGG - Chr6:16102865-16102884 MsG0680031214.01.T01:CDS 45.0%
ATGTGTCCACTGCAGAACAA+TGG + Chr6:16103818-16103837 None:intergenic 45.0%
CAACACAGTGCAGATACTCA+GGG + Chr6:16107529-16107548 None:intergenic 45.0%
CAAGAACTGAACGTGAATGG+GGG - Chr6:16100954-16100973 MsG0680031214.01.T01:three_prime_UTR 45.0%
CACCAACACGAAACAAACAC+AGG + Chr6:16101679-16101698 None:intergenic 45.0%
CCTACGAAGCAGAATTCAGT+AGG - Chr6:16104340-16104359 MsG0680031214.01.T01:intron 45.0%
CCTACTGAATTCTGCTTCAC+AGG + Chr6:16103696-16103715 None:intergenic 45.0%
CCTACTGAATTCTGCTTCGT+AGG + Chr6:16104343-16104362 None:intergenic 45.0%
CCTGGGAAAGAAAACTCCTT+AGG - Chr6:16105250-16105269 MsG0680031214.01.T01:intron 45.0%
CCTGTAGTATATACTCCCTC+CGG + Chr6:16105204-16105223 None:intergenic 45.0%
CCTGTGAAGCAGAATTCAGT+AGG - Chr6:16103693-16103712 MsG0680031214.01.T01:intron 45.0%
CGTAAGCAAAATTTGCGACG+TGG - Chr6:16106344-16106363 MsG0680031214.01.T01:intron 45.0%
GAAAACTCCTTAGGTGGAGT+TGG - Chr6:16105259-16105278 MsG0680031214.01.T01:intron 45.0%
GAAGAAATTCCTTTCCCCCT+TGG - Chr6:16105654-16105673 MsG0680031214.01.T01:intron 45.0%
GAGTTTGCACCAGAAGATGT+TGG - Chr6:16105705-16105724 MsG0680031214.01.T01:intron 45.0%
GCTTGTAAGCATCCAAGAAC+TGG - Chr6:16102661-16102680 MsG0680031214.01.T01:intron 45.0%
GGAACTGTTGTGATAGGAGA+TGG - Chr6:16105570-16105589 MsG0680031214.01.T01:intron 45.0%
GGGAAAGAAAACTCCTTAGG+TGG - Chr6:16105253-16105272 MsG0680031214.01.T01:intron 45.0%
GTCCTGTGTTTGTTTCGTGT+TGG - Chr6:16101674-16101693 MsG0680031214.01.T01:intron 45.0%
GTGAAGCAGAATTCAGTAGG+TGG - Chr6:16103696-16103715 MsG0680031214.01.T01:intron 45.0%
GTGAGTGTAAGAACGGGAAA+TGG - Chr6:16101840-16101859 MsG0680031214.01.T01:intron 45.0%
GTGCTGCATAGATCCAAACT+CGG + Chr6:16101209-16101228 None:intergenic 45.0%
TCAACACAGTGCAGATACTC+AGG + Chr6:16107530-16107549 None:intergenic 45.0%
TCAGCCATAACTGCTAGCAA+TGG - Chr6:16106567-16106586 MsG0680031214.01.T01:intron 45.0%
TCATTTGCAGCGCAAGCATT+AGG + Chr6:16105508-16105527 None:intergenic 45.0%
TCCAGAGTAGCTTCCTTTAC+AGG + Chr6:16103182-16103201 None:intergenic 45.0%
TGCAAATGCCTCTGCACTTT+GGG + Chr6:16102916-16102935 None:intergenic 45.0%
TGCTCAGGAACTGTTGTGAT+AGG - Chr6:16105564-16105583 MsG0680031214.01.T01:intron 45.0%
TGCTGACACAGAGTTGAAAC+CGG + Chr6:16103105-16103124 None:intergenic 45.0%
TGGCAGTAACATGAGCCATA+TGG + Chr6:16107588-16107607 None:intergenic 45.0%
TGGGTCTATCAAGTGAACCT+GGG - Chr6:16105233-16105252 MsG0680031214.01.T01:intron 45.0%
TGTTTATGGAGCTGAGCAGA+AGG - Chr6:16108067-16108086 MsG0680031214.01.T01:intron 45.0%
TTCTCTCCATTGTTCTGCAG+TGG - Chr6:16103809-16103828 MsG0680031214.01.T01:CDS 45.0%
TTGCAAATGCCTCTGCACTT+TGG + Chr6:16102917-16102936 None:intergenic 45.0%
TTGGGTCTATCAAGTGAACC+TGG - Chr6:16105232-16105251 MsG0680031214.01.T01:intron 45.0%
TTTGTCATCTCAGTGCCAAG+GGG + Chr6:16105672-16105691 None:intergenic 45.0%
! AAAGGAAGCTACTCTGGGAA+AGG - Chr6:16104118-16104137 MsG0680031214.01.T01:intron 45.0%
! CCGGAGTACTTGGATAACAA+TGG - Chr6:16107847-16107866 MsG0680031214.01.T01:intron 45.0%
! CCTAAGGAGTTTTCTTTCCC+AGG + Chr6:16105253-16105272 None:intergenic 45.0%
! GAGGGAGTATATACTACAGG+AGG - Chr6:16105204-16105223 MsG0680031214.01.T01:CDS 45.0%
! GTTTCGTGTTGGTGCTTCAT+AGG - Chr6:16101685-16101704 MsG0680031214.01.T01:intron 45.0%
! GTTTTCCCGCTTCACTTTCT+TGG + Chr6:16105311-16105330 None:intergenic 45.0%
! TAGCAGGTTGAAGTCAGCTT+TGG + Chr6:16108134-16108153 None:intergenic 45.0%
!! AGCTTGTAGTGGATCTATCC+AGG - Chr6:16103970-16103989 MsG0680031214.01.T01:CDS 45.0%
!! AGCTTGTAGTGGATCTATCC+GGG - Chr6:16103970-16103989 MsG0680031214.01.T01:CDS 45.0%
!! CACCTTTTCCGTCACTTTCT+TGG + Chr6:16103472-16103491 None:intergenic 45.0%
!! CCGTCGGATTGGCTTAATAA+AGG - Chr6:16106657-16106676 MsG0680031214.01.T01:intron 45.0%
!! GAAGTGCCGGCAAAAAACAA+GGG - Chr6:16102627-16102646 MsG0680031214.01.T01:intron 45.0%
!! GAGCTTGTAGTGGATCTATC+CGG - Chr6:16103666-16103685 MsG0680031214.01.T01:intron 45.0%
!! GAGCTTGTAGTGGATCTATC+TGG - Chr6:16103666-16103685 MsG0680031214.01.T01:intron 45.0%
!! GCTTGTAGTGGATCTATCCA+GGG - Chr6:16104315-16104334 MsG0680031214.01.T01:intron 45.0%
!! GCTTGTAGTGGATCTATCTG+GGG - Chr6:16103668-16103687 MsG0680031214.01.T01:intron 45.0%
!! TGAAGTGCCGGCAAAAAACA+AGG - Chr6:16102626-16102645 MsG0680031214.01.T01:intron 45.0%
!! TGCTGTGGTTTTGCCTGTAA+AGG - Chr6:16103166-16103185 MsG0680031214.01.T01:intron 45.0%
!!! CCGTTTTGAGTTTGGTGTTG+TGG - Chr6:16102972-16102991 MsG0680031214.01.T01:intron 45.0%
!!! ATTTATATTTTTTTATTGTT+TGG - Chr6:16101453-16101472 MsG0680031214.01.T01:intron 5.0%
ACCGGGAAGCTGAATTCACT+AGG - Chr6:16103411-16103430 MsG0680031214.01.T01:intron 50.0%
ACCTGTTCAACAGGCACTTG+TGG + Chr6:16102711-16102730 None:intergenic 50.0%
ACTGAAATTATCGCGGGTGC+CGG - Chr6:16101268-16101287 MsG0680031214.01.T01:intron 50.0%
AGAGTTGAAACCGGATGCCT+TGG + Chr6:16103096-16103115 None:intergenic 50.0%
ATTCTGCTTCATAGGCTCCC+CGG + Chr6:16103991-16104010 None:intergenic 50.0%
ATTCTGCTTCGTAGGTTCCC+TGG + Chr6:16104335-16104354 None:intergenic 50.0%
CCTACTGAATTCTGCTTCCC+AGG + Chr6:16104674-16104693 None:intergenic 50.0%
CCTGGGAAGCAGAATTCAGT+AGG - Chr6:16104671-16104690 MsG0680031214.01.T01:intron 50.0%
CTGCGTGTTAGTGTTGTGTC+AGG - Chr6:16101296-16101315 MsG0680031214.01.T01:CDS 50.0%
GCCTGTAAAGGAAGCTACTC+TGG - Chr6:16103178-16103197 MsG0680031214.01.T01:intron 50.0%
GGGAAGCTGAATTCACTAGG+TGG - Chr6:16103414-16103433 MsG0680031214.01.T01:intron 50.0%
GTGAATGGGGGTGATTCGAA+TGG - Chr6:16100966-16100985 MsG0680031214.01.T01:three_prime_UTR 50.0%
GTTGTGTCAGGTGTCTGTGT+TGG - Chr6:16101308-16101327 MsG0680031214.01.T01:CDS 50.0%
TGATGCAGTGAGAATCGAGC+CGG - Chr6:16107828-16107847 MsG0680031214.01.T01:intron 50.0%
TGGATCTATCTGGGGAACCT+GGG - Chr6:16103676-16103695 MsG0680031214.01.T01:intron 50.0%
TTGTCATCTCAGTGCCAAGG+GGG + Chr6:16105671-16105690 None:intergenic 50.0%
! CCGGAGGGAGTATATACTAC+AGG - Chr6:16105201-16105220 MsG0680031214.01.T01:CDS 50.0%
! GCCTTTTGCCTCAACCAACT+CGG + Chr6:16107177-16107196 None:intergenic 50.0%
! GTTCATTCAGCCAAGGCATC+CGG - Chr6:16103083-16103102 MsG0680031214.01.T01:intron 50.0%
! TGAAGCACCAACTCCACCTA+AGG + Chr6:16105269-16105288 None:intergenic 50.0%
! TTGTGACTGGTTGCTGGTCA+TGG - Chr6:16107681-16107700 MsG0680031214.01.T01:intron 50.0%
!! ACCGAGTTGGTTGAGGCAAA+AGG - Chr6:16107173-16107192 MsG0680031214.01.T01:intron 50.0%
!! AGCTCATACCGAGTTGGTTG+AGG - Chr6:16107166-16107185 MsG0680031214.01.T01:intron 50.0%
!! AGGTGGAGTTGGTGCTTCAA+AGG - Chr6:16105270-16105289 MsG0680031214.01.T01:intron 50.0%
!! GCTTGTAGTGGATCTATCCG+GGG - Chr6:16103971-16103990 MsG0680031214.01.T01:CDS 50.0%
!! GGAGTTGGTGCTTCAAAGGT+TGG - Chr6:16105274-16105293 MsG0680031214.01.T01:intron 50.0%
ACACTAACACGCAGTGACGC+CGG + Chr6:16101290-16101309 None:intergenic 55.0%
ATCTCAGTGCCAAGGGGGAA+AGG + Chr6:16105666-16105685 None:intergenic 55.0%
GCCACAAGTGCCTGTTGAAC+AGG - Chr6:16102707-16102726 MsG0680031214.01.T01:intron 55.0%
GGTGCCAAGTCCCAGACAAA+TGG - Chr6:16105603-16105622 MsG0680031214.01.T01:intron 55.0%
GTGGATCTATCTGGGGAACC+TGG - Chr6:16103675-16103694 MsG0680031214.01.T01:intron 55.0%
TGGAGCTGAGCAGAAGGATG+AGG - Chr6:16108073-16108092 MsG0680031214.01.T01:intron 55.0%
TGGATGTGCCCAAAGTGCAG+AGG - Chr6:16102905-16102924 MsG0680031214.01.T01:intron 55.0%
TGGCAAGGCTTCCCAGTTCT+TGG + Chr6:16102676-16102695 None:intergenic 55.0%
! GAGAATCGAGCCGGAGTACT+TGG - Chr6:16107837-16107856 MsG0680031214.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr6 gene 16100850 16108349 16100850 ID=MsG0680031214.01;Name=MsG0680031214.01
Chr6 mRNA 16100850 16108349 16100850 ID=MsG0680031214.01.T01;Parent=MsG0680031214.01;Name=MsG0680031214.01.T01;_AED=0.39;_eAED=0.39;_QI=71|1|1|1|1|1|17|195|835
Chr6 exon 16100850 16101181 16100850 ID=MsG0680031214.01.T01:exon:10849;Parent=MsG0680031214.01.T01
Chr6 exon 16101274 16101384 16101274 ID=MsG0680031214.01.T01:exon:10848;Parent=MsG0680031214.01.T01
Chr6 exon 16101990 16102155 16101990 ID=MsG0680031214.01.T01:exon:10847;Parent=MsG0680031214.01.T01
Chr6 exon 16102256 16102346 16102256 ID=MsG0680031214.01.T01:exon:10846;Parent=MsG0680031214.01.T01
Chr6 exon 16102439 16102636 16102439 ID=MsG0680031214.01.T01:exon:10845;Parent=MsG0680031214.01.T01
Chr6 exon 16102752 16102906 16102752 ID=MsG0680031214.01.T01:exon:10844;Parent=MsG0680031214.01.T01
Chr6 exon 16103429 16103628 16103429 ID=MsG0680031214.01.T01:exon:10843;Parent=MsG0680031214.01.T01
Chr6 exon 16103721 16104000 16103721 ID=MsG0680031214.01.T01:exon:10842;Parent=MsG0680031214.01.T01
Chr6 exon 16104424 16104555 16104424 ID=MsG0680031214.01.T01:exon:10841;Parent=MsG0680031214.01.T01
Chr6 exon 16104755 16104886 16104755 ID=MsG0680031214.01.T01:exon:10840;Parent=MsG0680031214.01.T01
Chr6 exon 16105060 16105230 16105060 ID=MsG0680031214.01.T01:exon:10839;Parent=MsG0680031214.01.T01
Chr6 exon 16105402 16105533 16105402 ID=MsG0680031214.01.T01:exon:10838;Parent=MsG0680031214.01.T01
Chr6 exon 16105711 16105815 16105711 ID=MsG0680031214.01.T01:exon:10837;Parent=MsG0680031214.01.T01
Chr6 exon 16105994 16106150 16105994 ID=MsG0680031214.01.T01:exon:10836;Parent=MsG0680031214.01.T01
Chr6 exon 16106248 16106334 16106248 ID=MsG0680031214.01.T01:exon:10835;Parent=MsG0680031214.01.T01
Chr6 exon 16106471 16106568 16106471 ID=MsG0680031214.01.T01:exon:10834;Parent=MsG0680031214.01.T01
Chr6 exon 16108123 16108349 16108123 ID=MsG0680031214.01.T01:exon:10833;Parent=MsG0680031214.01.T01
Chr6 five_prime_UTR 16108279 16108349 16108279 ID=MsG0680031214.01.T01:five_prime_utr;Parent=MsG0680031214.01.T01
Chr6 CDS 16108123 16108278 16108123 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16106471 16106568 16106471 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16106248 16106334 16106248 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16105994 16106150 16105994 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16105711 16105815 16105711 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16105402 16105533 16105402 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16105060 16105230 16105060 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16104755 16104886 16104755 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16104424 16104555 16104424 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16103721 16104000 16103721 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16103429 16103628 16103429 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16102752 16102906 16102752 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16102439 16102636 16102439 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16102256 16102346 16102256 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16101990 16102155 16101990 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16101274 16101384 16101274 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 CDS 16101045 16101181 16101045 ID=MsG0680031214.01.T01:cds;Parent=MsG0680031214.01.T01
Chr6 three_prime_UTR 16100850 16101044 16100850 ID=MsG0680031214.01.T01:three_prime_utr;Parent=MsG0680031214.01.T01
Gene Sequence

>MsG0680031214.01.T01

ATGGCTACTAAAATGGAAATCGATTTATCTTCACAAGAACTGAACGTGAATGGGGGTGATTCGAATGGAAAGAAATTGAATCGGAACAATAAATGCGGAGTTCGTGTTATTGGAAATCGAATCTATGATTCTGCTAATGGCAAAACTTGTCATCAGTGCCGGCAAAAAACAAGGGACTTTTCTGCTGCTTGTAAGCATCCAAGAACTGGGAAGCCTTGCCAAATTAAGTTCTGCCACAAGTGCCTGTTGAACAGATATGGTGAGAAGGCAGAAGAGGTAGAACTATTGAATGATTGGATGTGCCCAAAGTGCAGAGGCATTTGCAACTGCAGTATTTGCATGAAAAAAAGAGGTGAACAACCTACTGGTATACTAGTTCATTCAGCCAAGGCATCCGGTTTCAACTCTGTGTCAGCAATGCTTAGAAAGAAGGCTTCTGAAAGTTTGGAATCGAACAATGCTGTGGTTTTGCCTGTAAAGGAAGCTACTCTGGAAAAGGAGCTTGTGGTAGATCTATTTGGGGAAACCGGGAAGCTGAATTCACTAGGTGGAAACAAAGGTTTAAAGGTTGAAAATGAGAAAACCAAGAAAGTGACGGAAAAGGAGCTTGTAGTGGATCTATCTGGGGAACCTGTGAAGCAGAATTCAGTAGGTGGAAACATAGGTTTAAAGGTTGAAAATGGGAAAACCAAGACAATGAAGCGGAAAAAGTTAAAGGAAGATACTCTGGAAAAGGAGCTTGTAGTGGATCTATCCGGGGAGCCTATGAAGCAGAATTCAGTAGGTGAAAATATAGGTGAACCTATGAAGCAGAATTCAGTAGGTGAAAATATAGGTTTAAAGGTTGAAAATGAGAAAACCAAGACAATGAAGCGGAAAAAGTTAAAGGAAGCTACTCTGGGAAAGGAGCTTGTAGTGGATCTATCCAGGGAACCTACGAAGCAGAATTCAGTAGGTGAAAACATAGGTTTAAAGGTTGAAAATGAGAAAACCAAGACAATGAAGCGGAAAAAGTTAAAGGAAGCTACTCTGGGAAAGGAGCTTGTAGTGGATCTATCTGGGGAACCTGGGAAGCAGAATTCAGTAGGTGAAAACATAGGTTTAAAGGTTGGAAATGAGAAAACCAAGACAGTGAAGCAGAAAAAGTTAAAGGAAACTACTCTAGGAAAGGACCGGAGGGAGTATATACTACAGGAGGTTGTCTTGGGTCTATCAAGTGAACCTGGGAAAGAAAACTCCTTAGGTGGAGTTGGTGCTTCAAAGGTTGGACGTGAGAAAACCAAGAAAGTGAAGCGGGAAAACTTAAAGGAAATATCCAATGGCAACAGTGTTGATGATGCTTGCCAAAACAAGAAATCGAAAAAGCCTAAACTTTCTAATGTAGTTTCAGAGGGTGAAGTGAAACCAAAAGCAAATTCTGAAACGGGGACAAAAATAGGGGAGAATCATGGAACTGTTGTGATAGGAGATGGTGACAATGCTGGTGCCAAGTCCCAGACAAATGGTAAAATTTTGCATGAAGAAAAAATTAAGGAAGAAATTCCTTTCCCCCTTGGCACTGAGATGACAAAAATATTAGACATTGAGTTTGCACCAGAAGATGTTGGGAATGCATTGCAGTTTTTAGAATTCTGCAGATTGTTTGGAAAGGCTCTTGATGTCAAGAAAGGAGAAGCAGTAGCTGTTCTAAGAGCATTGATACGTAAGCAAAATTTGCGACGTGGACAAAACACCTTAGTGGTTGAGTTCCAAATCAAACTGTTGACTTTGATAGTCTCTGATTCTGAATCTGATTCAGAAACCGAGTCTTCAGCCATAACTGCTAGCAATGGAAAAAACTCATGGTTGAAAGTTTTGGAAGATTTAATTACTGAATCTGATCTTGTACTAAAAGAATTTCCGTCGGATTGGCTTAATAAAGGCATAAGTGGATATTATGATTTGGACTTATCCAAAAAGCTTATCCTTCTGAATTTTATTTGTGATGAAGCCTTGGGCACGATGAAGCTAAGGAATTATATTGATGATCAAAATGCAAGATTTGTTGAAGAAAAGAAAGCAGCAAAGTCTAAGGTTTCTGAAGCTAAGGAAAAGGAAAGAAGTCTTAAGCAAAAGTTGCAGGATGAGATTGCAAAAGCTGTTGTATCAAATGGAGCTAGCCTCTCAATTTCAGAACACGATGCTCTTCTTGCAAAGATAAAAAGTGAAACAGCTAAAGCTCATACCGAGTTGGTTGAGGCAAAAGGCACAATTCCTAAACGGAACCAACATTGTGATGCAGTGAGAATCGAGCCGGAGTACTTGGATAACAATGGTAAGGCATTCTGGAAACTAAGAAGCTGTAATGATGAATATGCCTATATGTTACAAGATATGAAGATCCGTGATGAAGATGGTGTTGAAGTTGATGAAAAATGGTTTGTTTATGGAGCTGAGCAGAAGGATGAGGTTAATAAGTACATTTCATCTAGGAGAGATTGGTTACCAAAGCTGACTTCAACCTGCTAG

Protein sequence

>MsG0680031214.01.T01

MATKMEIDLSSQELNVNGGDSNGKKLNRNNKCGVRVIGNRIYDSANGKTCHQCRQKTRDFSAACKHPRTGKPCQIKFCHKCLLNRYGEKAEEVELLNDWMCPKCRGICNCSICMKKRGEQPTGILVHSAKASGFNSVSAMLRKKASESLESNNAVVLPVKEATLEKELVVDLFGETGKLNSLGGNKGLKVENEKTKKVTEKELVVDLSGEPVKQNSVGGNIGLKVENGKTKTMKRKKLKEDTLEKELVVDLSGEPMKQNSVGENIGEPMKQNSVGENIGLKVENEKTKTMKRKKLKEATLGKELVVDLSREPTKQNSVGENIGLKVENEKTKTMKRKKLKEATLGKELVVDLSGEPGKQNSVGENIGLKVGNEKTKTVKQKKLKETTLGKDRREYILQEVVLGLSSEPGKENSLGGVGASKVGREKTKKVKRENLKEISNGNSVDDACQNKKSKKPKLSNVVSEGEVKPKANSETGTKIGENHGTVVIGDGDNAGAKSQTNGKILHEEKIKEEIPFPLGTEMTKILDIEFAPEDVGNALQFLEFCRLFGKALDVKKGEAVAVLRALIRKQNLRRGQNTLVVEFQIKLLTLIVSDSESDSETESSAITASNGKNSWLKVLEDLITESDLVLKEFPSDWLNKGISGYYDLDLSKKLILLNFICDEALGTMKLRNYIDDQNARFVEEKKAAKSKVSEAKEKERSLKQKLQDEIAKAVVSNGASLSISEHDALLAKIKSETAKAHTELVEAKGTIPKRNQHCDAVRIEPEYLDNNGKAFWKLRSCNDEYAYMLQDMKIRDEDGVEVDEKWFVYGAEQKDEVNKYISSRRDWLPKLTSTC*