Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018052.01.T01 | XP_003604043.1 | 98.718 | 156 | 2 | 0 | 1 | 156 | 1 | 156 | 2.69E-112 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018052.01.T01 | Q9SZN7 | 76.282 | 156 | 34 | 1 | 1 | 156 | 1 | 153 | 1.09E-83 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018052.01.T01 | G7J8I5 | 98.718 | 156 | 2 | 0 | 1 | 156 | 1 | 156 | 1.29e-112 | 325 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048957.01 | MsG0380018052.01 | 0.885062 | 1.123735e-71 | 7.600774e-68 |
| MsG0180000023.01 | MsG0380018052.01 | 0.812100 | 5.023949e-51 | 3.165259e-48 |
| MsG0180000157.01 | MsG0380018052.01 | 0.804449 | 2.149124e-49 | 1.108383e-46 |
| MsG0180000673.01 | MsG0380018052.01 | 0.804056 | 2.593741e-49 | 1.324373e-46 |
| MsG0180002140.01 | MsG0380018052.01 | 0.831379 | 1.726137e-55 | 1.869899e-52 |
| MsG0180003088.01 | MsG0380018052.01 | 0.819404 | 1.182343e-52 | 9.089659e-50 |
| MsG0180004603.01 | MsG0380018052.01 | 0.834240 | 3.359728e-56 | 3.963496e-53 |
| MsG0180004886.01 | MsG0380018052.01 | -0.801804 | 7.573711e-49 | 3.650571e-46 |
| MsG0180006220.01 | MsG0380018052.01 | 0.811696 | 6.152635e-51 | 3.834321e-48 |
| MsG0280006302.01 | MsG0380018052.01 | -0.800166 | 1.637363e-48 | 7.571189e-46 |
| MsG0280006406.01 | MsG0380018052.01 | 0.805482 | 1.306802e-49 | 6.921502e-47 |
| MsG0280006411.01 | MsG0380018052.01 | 0.804097 | 2.544463e-49 | 1.300482e-46 |
| MsG0380016117.01 | MsG0380018052.01 | 0.803350 | 3.636048e-49 | 1.822959e-46 |
| MsG0380017226.01 | MsG0380018052.01 | 0.844607 | 6.807273e-59 | 1.104862e-55 |
| MsG0380017286.01 | MsG0380018052.01 | 0.802079 | 6.651914e-49 | 3.228699e-46 |
| MsG0380017941.01 | MsG0380018052.01 | 0.829288 | 5.597399e-55 | 5.704815e-52 |
| MsG0380018052.01 | MsG0480020843.01 | 0.872800 | 2.407367e-67 | 1.020683e-63 |
| MsG0380018052.01 | MsG0580025400.01 | 0.813575 | 2.388101e-51 | 1.565355e-48 |
| MsG0380018052.01 | MsG0680031694.01 | 0.809036 | 2.307964e-50 | 1.340561e-47 |
| MsG0380018052.01 | MsG0680031712.01 | 0.801361 | 9.337086e-49 | 4.450439e-46 |
| MsG0380018052.01 | MsG0680032641.01 | 0.809558 | 1.783608e-50 | 1.050542e-47 |
| MsG0380018052.01 | MsG0680035854.01 | 0.814432 | 1.545637e-51 | 1.036951e-48 |
| MsG0380018052.01 | MsG0780037628.01 | 0.804280 | 2.329826e-49 | 1.196394e-46 |
| MsG0380018052.01 | MsG0780041294.01 | 0.808666 | 2.768574e-50 | 1.592408e-47 |
| MsG0280010423.01 | MsG0380018052.01 | -0.823245 | 1.536401e-53 | 1.315680e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018052.01.T01 | MTR_3g117890 | 98.718 | 156 | 2 | 0 | 1 | 156 | 1 | 156 | 3.26e-116 | 325 |
| MsG0380018052.01.T01 | MTR_4g073040 | 79.245 | 159 | 27 | 3 | 1 | 156 | 1 | 156 | 2.24e-88 | 254 |
| MsG0380018052.01.T01 | MTR_5g022620 | 61.491 | 161 | 53 | 3 | 1 | 156 | 1 | 157 | 1.02e-65 | 197 |
| MsG0380018052.01.T01 | MTR_1g030630 | 53.205 | 156 | 64 | 3 | 1 | 156 | 1 | 147 | 1.64e-53 | 166 |
| MsG0380018052.01.T01 | MTR_8g091420 | 51.613 | 155 | 69 | 3 | 2 | 156 | 5 | 153 | 5.52e-49 | 155 |
| MsG0380018052.01.T01 | MTR_3g087770 | 51.923 | 156 | 66 | 4 | 2 | 156 | 5 | 152 | 6.44e-49 | 155 |
| MsG0380018052.01.T01 | MTR_5g025150 | 47.436 | 156 | 71 | 3 | 1 | 156 | 1 | 145 | 1.61e-45 | 146 |
| MsG0380018052.01.T01 | MTR_6g003990 | 45.062 | 162 | 76 | 3 | 1 | 156 | 1 | 155 | 6.85e-45 | 145 |
| MsG0380018052.01.T01 | MTR_7g083060 | 48.077 | 156 | 71 | 3 | 1 | 156 | 1 | 146 | 7.89e-45 | 144 |
| MsG0380018052.01.T01 | MTR_3g073670 | 47.742 | 155 | 71 | 3 | 2 | 156 | 5 | 149 | 2.90e-42 | 138 |
| MsG0380018052.01.T01 | MTR_6g003990 | 46.341 | 123 | 61 | 1 | 34 | 156 | 1 | 118 | 3.89e-36 | 121 |
| MsG0380018052.01.T01 | MTR_5g055020 | 37.821 | 156 | 88 | 3 | 1 | 156 | 1 | 147 | 1.23e-34 | 118 |
| MsG0380018052.01.T01 | MTR_1g078090 | 38.686 | 137 | 76 | 4 | 25 | 156 | 52 | 185 | 2.87e-24 | 93.2 |
| MsG0380018052.01.T01 | MTR_6g026890 | 36.029 | 136 | 81 | 4 | 25 | 156 | 15 | 148 | 4.08e-23 | 89.4 |
| MsG0380018052.01.T01 | MTR_2g091235 | 36.429 | 140 | 77 | 3 | 28 | 156 | 4 | 142 | 4.26e-22 | 86.3 |
| MsG0380018052.01.T01 | MTR_6g045203 | 36.364 | 143 | 70 | 6 | 28 | 156 | 5 | 140 | 5.05e-18 | 75.9 |
| MsG0380018052.01.T01 | MTR_7g013660 | 48.485 | 66 | 33 | 1 | 26 | 91 | 4 | 68 | 3.92e-14 | 65.5 |
| MsG0380018052.01.T01 | MTR_3g435930 | 34.586 | 133 | 74 | 3 | 26 | 156 | 116 | 237 | 4.24e-14 | 67.4 |
| MsG0380018052.01.T01 | MTR_1g083310 | 36.765 | 68 | 43 | 0 | 25 | 92 | 14 | 81 | 2.56e-12 | 63.5 |
| MsG0380018052.01.T01 | MTR_1g092670 | 45.455 | 66 | 35 | 1 | 26 | 91 | 4 | 68 | 4.57e-12 | 58.9 |
| MsG0380018052.01.T01 | MTR_7g108560 | 36.765 | 68 | 42 | 1 | 24 | 91 | 20 | 86 | 7.12e-12 | 62.0 |
| MsG0380018052.01.T01 | MTR_7g113110 | 42.857 | 63 | 35 | 1 | 30 | 92 | 37 | 98 | 1.02e-11 | 62.0 |
| MsG0380018052.01.T01 | MTR_3g010130 | 55.769 | 52 | 21 | 2 | 1 | 52 | 1 | 50 | 2.53e-11 | 56.6 |
| MsG0380018052.01.T01 | MTR_1g107565 | 39.706 | 68 | 40 | 1 | 24 | 91 | 11 | 77 | 3.72e-11 | 60.5 |
| MsG0380018052.01.T01 | MTR_3g067750 | 41.538 | 65 | 37 | 1 | 26 | 90 | 12 | 75 | 4.95e-11 | 58.9 |
| MsG0380018052.01.T01 | MTR_7g100450 | 46.269 | 67 | 34 | 1 | 26 | 92 | 209 | 273 | 8.54e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018052.01.T01 | AT4G38580 | 76.282 | 156 | 34 | 1 | 1 | 156 | 1 | 153 | 1.11e-84 | 245 |
| MsG0380018052.01.T01 | AT4G38580 | 76.282 | 156 | 34 | 1 | 1 | 156 | 1 | 153 | 1.11e-84 | 245 |
| MsG0380018052.01.T01 | AT4G35060 | 70.701 | 157 | 41 | 3 | 1 | 156 | 1 | 153 | 1.89e-76 | 224 |
| MsG0380018052.01.T01 | AT5G66110 | 66.667 | 138 | 44 | 1 | 19 | 156 | 12 | 147 | 2.19e-66 | 199 |
| MsG0380018052.01.T01 | AT5G66110 | 66.667 | 138 | 44 | 1 | 19 | 156 | 12 | 147 | 2.19e-66 | 199 |
| MsG0380018052.01.T01 | AT5G66110 | 65.854 | 123 | 40 | 1 | 34 | 156 | 1 | 121 | 1.48e-58 | 178 |
| MsG0380018052.01.T01 | AT1G71050 | 56.329 | 158 | 61 | 4 | 1 | 156 | 1 | 152 | 9.64e-54 | 167 |
| MsG0380018052.01.T01 | AT1G22990 | 49.057 | 159 | 71 | 2 | 1 | 156 | 1 | 152 | 2.00e-50 | 159 |
| MsG0380018052.01.T01 | AT1G22990 | 46.795 | 156 | 74 | 2 | 1 | 156 | 1 | 147 | 2.34e-47 | 150 |
| MsG0380018052.01.T01 | AT4G39700 | 48.734 | 158 | 74 | 4 | 2 | 156 | 5 | 158 | 1.24e-44 | 144 |
| MsG0380018052.01.T01 | AT5G17450 | 45.860 | 157 | 76 | 3 | 1 | 156 | 1 | 149 | 1.48e-42 | 139 |
| MsG0380018052.01.T01 | AT4G08570 | 44.231 | 156 | 76 | 4 | 2 | 156 | 5 | 150 | 3.28e-40 | 132 |
| MsG0380018052.01.T01 | AT5G17450 | 43.396 | 106 | 51 | 3 | 52 | 156 | 8 | 105 | 1.51e-25 | 94.4 |
| MsG0380018052.01.T01 | AT1G06330 | 38.000 | 150 | 71 | 6 | 27 | 156 | 3 | 150 | 4.89e-24 | 91.7 |
| MsG0380018052.01.T01 | AT2G18196 | 33.824 | 136 | 84 | 4 | 25 | 156 | 45 | 178 | 4.05e-20 | 82.4 |
| MsG0380018052.01.T01 | AT4G10465 | 33.566 | 143 | 89 | 3 | 18 | 156 | 43 | 183 | 1.80e-19 | 80.9 |
| MsG0380018052.01.T01 | AT3G56891 | 32.544 | 169 | 89 | 6 | 10 | 156 | 1 | 166 | 1.57e-18 | 77.8 |
| MsG0380018052.01.T01 | AT2G18196 | 33.071 | 127 | 79 | 4 | 34 | 156 | 1 | 125 | 2.37e-16 | 71.2 |
| MsG0380018052.01.T01 | AT3G56891 | 33.103 | 145 | 73 | 5 | 34 | 156 | 1 | 143 | 3.69e-16 | 71.2 |
| MsG0380018052.01.T01 | AT1G29100 | 33.974 | 156 | 65 | 4 | 27 | 156 | 4 | 147 | 1.26e-15 | 69.7 |
| MsG0380018052.01.T01 | AT1G29100 | 33.333 | 153 | 64 | 4 | 30 | 156 | 1 | 141 | 3.31e-14 | 65.9 |
| MsG0380018052.01.T01 | AT1G56210 | 39.744 | 78 | 46 | 1 | 25 | 102 | 39 | 115 | 9.06e-13 | 65.1 |
| MsG0380018052.01.T01 | AT1G66240 | 43.939 | 66 | 36 | 1 | 26 | 91 | 33 | 97 | 1.20e-12 | 60.8 |
| MsG0380018052.01.T01 | AT3G56240 | 47.761 | 67 | 34 | 1 | 26 | 92 | 3 | 68 | 2.19e-12 | 60.8 |
| MsG0380018052.01.T01 | AT3G56240 | 47.761 | 67 | 34 | 1 | 26 | 92 | 3 | 68 | 2.19e-12 | 60.8 |
| MsG0380018052.01.T01 | AT3G02960 | 28.571 | 133 | 85 | 2 | 24 | 156 | 124 | 246 | 4.53e-12 | 62.4 |
| MsG0380018052.01.T01 | AT5G27690 | 39.130 | 69 | 41 | 1 | 24 | 92 | 28 | 95 | 1.74e-11 | 61.2 |
| MsG0380018052.01.T01 | AT3G06130 | 39.706 | 68 | 40 | 1 | 24 | 91 | 8 | 74 | 4.39e-11 | 60.1 |
Find 47 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACACCGCAAACAATTTC+AGG | 0.262177 | 3:-103765936 | MsG0380018052.01.T01:intron |
| AGCACACAAGGTCACTGTTC+AGG | 0.319616 | 3:-103765735 | MsG0380018052.01.T01:CDS |
| TCGTACGTACCTTGTGCATA+TGG | 0.340646 | 3:+103765614 | None:intergenic |
| TACGACAACAATCAGTATTC+TGG | 0.342642 | 3:-103765557 | MsG0380018052.01.T01:CDS |
| ATACGCGCCACCACTTTGTT+AGG | 0.355486 | 3:+103765701 | None:intergenic |
| TCGCTCACCGCACTGGTAAG+AGG | 0.420324 | 3:-103765679 | MsG0380018052.01.T01:CDS |
| CTTTCCTATCAATATCAACT+TGG | 0.425944 | 3:+103765756 | None:intergenic |
| GTAGTTGTTTCTAACATAAC+CGG | 0.435319 | 3:+103765577 | None:intergenic |
| AAGAGATAATATGGGTGCTC+TGG | 0.436844 | 3:-103766002 | None:intergenic |
| GGGTGTGCAACGACGTCGTA+TGG | 0.444075 | 3:+103765635 | None:intergenic |
| CTATTACCTGAAATTGTTTG+CGG | 0.461292 | 3:+103765930 | None:intergenic |
| GAAATTGTTTGCGGTGTTTG+TGG | 0.465422 | 3:+103765939 | None:intergenic |
| ACGACGTCGTATGGAACATA+TGG | 0.471597 | 3:+103765644 | None:intergenic |
| TCAGTATTCTGGATCCCATC+TGG | 0.473879 | 3:-103765546 | MsG0380018052.01.T01:CDS |
| TGAACCAAGTTGATATTGAT+AGG | 0.475748 | 3:-103765760 | MsG0380018052.01.T01:CDS |
| AAATTGTTTGCGGTGTTTGT+GGG | 0.476948 | 3:+103765940 | None:intergenic |
| GCACACAAGGTCACTGTTCA+GGG | 0.478112 | 3:-103765734 | MsG0380018052.01.T01:CDS |
| TACGACAAGAAAGCACCTTC+CGG | 0.490150 | 3:-103765596 | MsG0380018052.01.T01:CDS |
| ATGATATCACATGACAGAAC+AGG | 0.494670 | 3:+103765463 | None:intergenic |
| CTGGTAAGAGGGCTGAGATA+TGG | 0.502117 | 3:-103765667 | MsG0380018052.01.T01:CDS |
| CGTACGTACCTTGTGCATAT+GGG | 0.507821 | 3:+103765615 | None:intergenic |
| GTGTTTGTGGGAACTTCCAC+CGG | 0.512215 | 3:+103765952 | None:intergenic |
| TGGAACTAGCACGCGCCAGA+TGG | 0.513296 | 3:+103765531 | None:intergenic |
| GCGCGTATCGCTCACCGCAC+TGG | 0.514553 | 3:-103765686 | MsG0380018052.01.T01:CDS |
| CGCTCACCGCACTGGTAAGA+GGG | 0.517783 | 3:-103765678 | MsG0380018052.01.T01:CDS |
| TCTGAGCTATTTGACTGCTC+CGG | 0.534149 | 3:-103765971 | MsG0380018052.01.T01:CDS |
| AAAGTGAGAAGGTCGGTGGA+AGG | 0.544215 | 3:-103765794 | MsG0380018052.01.T01:CDS |
| GGTGGAAGTGAAAGTGAAGA+TGG | 0.547212 | 3:-103765837 | MsG0380018052.01.T01:CDS |
| GAGCTATTTGACTGCTCCGG+TGG | 0.554467 | 3:-103765968 | MsG0380018052.01.T01:CDS |
| GGAACTAGCACGCGCCAGAT+GGG | 0.557432 | 3:+103765532 | None:intergenic |
| AGGTCGGTGGAAGGAATGAA+AGG | 0.586836 | 3:-103765785 | MsG0380018052.01.T01:CDS |
| GAGAAAAGTGAGAAGGTCGG+TGG | 0.602080 | 3:-103765798 | MsG0380018052.01.T01:CDS |
| AGCGGTGGTGTAGCGAACTT+CGG | 0.605621 | 3:+103765508 | None:intergenic |
| TCACATGACAGAACAGGCGG+TGG | 0.625825 | 3:+103765469 | None:intergenic |
| CGAGAGAAAAGTGAGAAGGT+CGG | 0.626298 | 3:-103765801 | MsG0380018052.01.T01:CDS |
| TATTGATAGGAAAGCACACA+AGG | 0.639331 | 3:-103765747 | MsG0380018052.01.T01:CDS |
| GATGCGAGAGAAAAGTGAGA+AGG | 0.650873 | 3:-103765805 | MsG0380018052.01.T01:CDS |
| CACATGACAGAACAGGCGGT+GGG | 0.664346 | 3:+103765470 | None:intergenic |
| TTGTTTCTAACATAACCGGA+AGG | 0.675813 | 3:+103765581 | None:intergenic |
| TGTTGAACCTAACAAAGTGG+TGG | 0.684270 | 3:-103765708 | MsG0380018052.01.T01:CDS |
| CACACAAGGTCACTGTTCAG+GGG | 0.691299 | 3:-103765733 | MsG0380018052.01.T01:CDS |
| GGTGGTGTAGCGAACTTCGG+TGG | 0.699721 | 3:+103765511 | None:intergenic |
| ATATCACATGACAGAACAGG+CGG | 0.726418 | 3:+103765466 | None:intergenic |
| GTTGCACACCCATATGCACA+AGG | 0.727359 | 3:-103765623 | MsG0380018052.01.T01:CDS |
| GTATGTTGAACCTAACAAAG+TGG | 0.728726 | 3:-103765711 | MsG0380018052.01.T01:CDS |
| TCTCAGCCCTCTTACCAGTG+CGG | 0.734386 | 3:+103765672 | None:intergenic |
| AAAGTGAAGATGGACTGCGA+AGG | 0.769260 | 3:-103765827 | MsG0380018052.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAACATATGAATATGAA+TGG | + | Chr3:103765564-103765583 | None:intergenic | 15.0% |
| !! | TATATATATATATGTACAGA+CGG | - | Chr3:103765603-103765622 | MsG0380018052.01.T01:CDS | 15.0% |
| ! | ACATATGAATATGAATGGAA+TGG | + | Chr3:103765559-103765578 | None:intergenic | 25.0% |
| ATATATATATGTACAGACGG+TGG | - | Chr3:103765606-103765625 | MsG0380018052.01.T01:CDS | 30.0% | |
| CTATTACCTGAAATTGTTTG+CGG | + | Chr3:103765534-103765553 | None:intergenic | 30.0% | |
| CTTTCCTATCAATATCAACT+TGG | + | Chr3:103765708-103765727 | None:intergenic | 30.0% | |
| !! | GTAGTTGTTTCTAACATAAC+CGG | + | Chr3:103765887-103765906 | None:intergenic | 30.0% |
| !! | TGAACCAAGTTGATATTGAT+AGG | - | Chr3:103765701-103765720 | MsG0380018052.01.T01:CDS | 30.0% |
| AAATTGTTTGCGGTGTTTGT+GGG | + | Chr3:103765524-103765543 | None:intergenic | 35.0% | |
| GTATGTTGAACCTAACAAAG+TGG | - | Chr3:103765750-103765769 | MsG0380018052.01.T01:CDS | 35.0% | |
| TACGACAACAATCAGTATTC+TGG | - | Chr3:103765904-103765923 | MsG0380018052.01.T01:intron | 35.0% | |
| ! | TATTGATAGGAAAGCACACA+AGG | - | Chr3:103765714-103765733 | MsG0380018052.01.T01:CDS | 35.0% |
| !! | TTGTTTCTAACATAACCGGA+AGG | + | Chr3:103765883-103765902 | None:intergenic | 35.0% |
| CAAACACCGCAAACAATTTC+AGG | - | Chr3:103765525-103765544 | MsG0380018052.01.T01:CDS | 40.0% | |
| GAAATTGTTTGCGGTGTTTG+TGG | + | Chr3:103765525-103765544 | None:intergenic | 40.0% | |
| TGTTGAACCTAACAAAGTGG+TGG | - | Chr3:103765753-103765772 | MsG0380018052.01.T01:CDS | 40.0% | |
| ACGACGTCGTATGGAACATA+TGG | + | Chr3:103765820-103765839 | None:intergenic | 45.0% | |
| CGAGAGAAAAGTGAGAAGGT+CGG | - | Chr3:103765660-103765679 | MsG0380018052.01.T01:CDS | 45.0% | |
| CGTACGTACCTTGTGCATAT+GGG | + | Chr3:103765849-103765868 | None:intergenic | 45.0% | |
| GATGCGAGAGAAAAGTGAGA+AGG | - | Chr3:103765656-103765675 | MsG0380018052.01.T01:CDS | 45.0% | |
| GGTGGAAGTGAAAGTGAAGA+TGG | - | Chr3:103765624-103765643 | MsG0380018052.01.T01:CDS | 45.0% | |
| TCAGTATTCTGGATCCCATC+TGG | - | Chr3:103765915-103765934 | MsG0380018052.01.T01:intron | 45.0% | |
| TCGTACGTACCTTGTGCATA+TGG | + | Chr3:103765850-103765869 | None:intergenic | 45.0% | |
| TCTGAGCTATTTGACTGCTC+CGG | - | Chr3:103765490-103765509 | MsG0380018052.01.T01:CDS | 45.0% | |
| !! | AAAGTGAAGATGGACTGCGA+AGG | - | Chr3:103765634-103765653 | MsG0380018052.01.T01:CDS | 45.0% |
| !! | TACGACAAGAAAGCACCTTC+CGG | - | Chr3:103765865-103765884 | MsG0380018052.01.T01:intron | 45.0% |
| AAAGTGAGAAGGTCGGTGGA+AGG | - | Chr3:103765667-103765686 | MsG0380018052.01.T01:CDS | 50.0% | |
| AGCACACAAGGTCACTGTTC+AGG | - | Chr3:103765726-103765745 | MsG0380018052.01.T01:CDS | 50.0% | |
| AGGTCGGTGGAAGGAATGAA+AGG | - | Chr3:103765676-103765695 | MsG0380018052.01.T01:CDS | 50.0% | |
| ATACGCGCCACCACTTTGTT+AGG | + | Chr3:103765763-103765782 | None:intergenic | 50.0% | |
| CACACAAGGTCACTGTTCAG+GGG | - | Chr3:103765728-103765747 | MsG0380018052.01.T01:CDS | 50.0% | |
| CTGGTAAGAGGGCTGAGATA+TGG | - | Chr3:103765794-103765813 | MsG0380018052.01.T01:CDS | 50.0% | |
| GAGAAAAGTGAGAAGGTCGG+TGG | - | Chr3:103765663-103765682 | MsG0380018052.01.T01:CDS | 50.0% | |
| GCACACAAGGTCACTGTTCA+GGG | - | Chr3:103765727-103765746 | MsG0380018052.01.T01:CDS | 50.0% | |
| GTGTTTGTGGGAACTTCCAC+CGG | + | Chr3:103765512-103765531 | None:intergenic | 50.0% | |
| GTTGCACACCCATATGCACA+AGG | - | Chr3:103765838-103765857 | MsG0380018052.01.T01:CDS | 50.0% | |
| ! | ATTTTCGTCGCTGAAAGCGG+TGG | + | Chr3:103765971-103765990 | None:intergenic | 50.0% |
| ! | GGGATTTTCGTCGCTGAAAG+CGG | + | Chr3:103765974-103765993 | None:intergenic | 50.0% |
| AGCGGTGGTGTAGCGAACTT+CGG | + | Chr3:103765956-103765975 | None:intergenic | 55.0% | |
| CACATGACAGAACAGGCGGT+GGG | + | Chr3:103765994-103766013 | None:intergenic | 55.0% | |
| GAGCTATTTGACTGCTCCGG+TGG | - | Chr3:103765493-103765512 | MsG0380018052.01.T01:CDS | 55.0% | |
| TCACATGACAGAACAGGCGG+TGG | + | Chr3:103765995-103766014 | None:intergenic | 55.0% | |
| TCTCAGCCCTCTTACCAGTG+CGG | + | Chr3:103765792-103765811 | None:intergenic | 55.0% | |
| GGAACTAGCACGCGCCAGAT+GGG | + | Chr3:103765932-103765951 | None:intergenic | 60.0% | |
| GGGTGTGCAACGACGTCGTA+TGG | + | Chr3:103765829-103765848 | None:intergenic | 60.0% | |
| GGTGGTGTAGCGAACTTCGG+TGG | + | Chr3:103765953-103765972 | None:intergenic | 60.0% | |
| TGGAACTAGCACGCGCCAGA+TGG | + | Chr3:103765933-103765952 | None:intergenic | 60.0% | |
| ! | CGCTCACCGCACTGGTAAGA+GGG | - | Chr3:103765783-103765802 | MsG0380018052.01.T01:CDS | 60.0% |
| ! | TCGCTCACCGCACTGGTAAG+AGG | - | Chr3:103765782-103765801 | MsG0380018052.01.T01:CDS | 60.0% |
| GCGCGTATCGCTCACCGCAC+TGG | - | Chr3:103765775-103765794 | MsG0380018052.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 103765469 | 103766014 | 103765469 | ID=MsG0380018052.01;Name=MsG0380018052.01 |
| Chr3 | mRNA | 103765469 | 103766014 | 103765469 | ID=MsG0380018052.01.T01;Parent=MsG0380018052.01;Name=MsG0380018052.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|156 |
| Chr3 | exon | 103765937 | 103766014 | 103765937 | ID=MsG0380018052.01.T01:exon:30965;Parent=MsG0380018052.01.T01 |
| Chr3 | exon | 103765469 | 103765861 | 103765469 | ID=MsG0380018052.01.T01:exon:30964;Parent=MsG0380018052.01.T01 |
| Chr3 | CDS | 103765937 | 103766014 | 103765937 | ID=MsG0380018052.01.T01:cds;Parent=MsG0380018052.01.T01 |
| Chr3 | CDS | 103765469 | 103765861 | 103765469 | ID=MsG0380018052.01.T01:cds;Parent=MsG0380018052.01.T01 |
| Gene Sequence |
| Protein sequence |
