AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041294.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041294.01.T01 MTR_7g108870 90.855 339 24 2 75 406 40 378 0.0 631
MsG0780041294.01.T01 MTR_8g058590 90.855 339 24 2 75 406 40 378 0.0 631
MsG0780041294.01.T01 MTR_7g108870 85.463 227 26 2 75 294 40 266 1.40e-135 389
MsG0780041294.01.T01 MTR_8g058557 97.561 164 4 0 75 238 40 203 2.01e-114 334
MsG0780041294.01.T01 MTR_8g058607 73.134 67 16 1 8 74 41 105 1.13e-24 99.0
MsG0780041294.01.T01 MTR_7g108868 73.134 67 16 1 8 74 28 92 1.58e-24 99.8
MsG0780041294.01.T01 MTR_8g058593 73.134 67 16 1 8 74 28 92 1.58e-24 99.8
MsG0780041294.01.T01 MTR_7g109250 42.373 118 18 2 7 74 86 203 4.49e-17 82.0
MsG0780041294.01.T01 MTR_7g109250 42.017 119 19 2 6 74 145 263 1.79e-16 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041294.01.T01 AT2G47790 62.865 342 115 5 76 406 52 392 3.29e-151 433
MsG0780041294.01.T01 AT5G06420 39.669 121 23 1 4 74 128 248 3.71e-15 77.0
MsG0780041294.01.T01 AT5G06420 39.669 121 23 1 4 74 128 248 3.71e-15 77.0
MsG0780041294.01.T01 AT1G01350 38.843 121 24 1 4 74 93 213 8.49e-14 72.4

Find 77 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTCTGAAAGTTGGAATT+TGG 0.165604 7:-89268939 MsG0780041294.01.T01:CDS
CTCATTTCTGCTTCAGTTGA+TGG 0.185036 7:-89269901 MsG0780041294.01.T01:CDS
ATGAGCTTGCCTTGTTCTTC+AGG 0.238064 7:+89269919 None:intergenic
GTCGTTTCACTGTAATTTAC+AGG 0.258641 7:+89267601 None:intergenic
GAACAAGAGCTTAGAATATT+GGG 0.292886 7:+89271639 None:intergenic
CATCCACATGAGAATCTTCT+AGG 0.294934 7:+89270979 None:intergenic
AGAACAAGAGCTTAGAATAT+TGG 0.313825 7:+89271638 None:intergenic
CGGCACAAATGCGGGTACTT+TGG 0.324412 7:-89267632 MsG0780041294.01.T01:CDS
GGCACAAATGCGGGTACTTT+GGG 0.345345 7:-89267631 MsG0780041294.01.T01:CDS
ATCTTGGATTTCAAGTTCAT+TGG 0.361402 7:-89267410 MsG0780041294.01.T01:CDS
TACAGTGAAACGACAACAAT+TGG 0.373503 7:-89267592 MsG0780041294.01.T01:CDS
TGAAGACTCAAAATGAAAGT+TGG 0.376024 7:+89273747 None:intergenic
AAAATGAAAGTTGGGCTTCT+CGG 0.382812 7:+89273756 None:intergenic
TTGAAGTCTTTGCATATGTC+AGG 0.387439 7:+89273576 None:intergenic
GCATCAAAACTAGTATTAGT+AGG 0.387663 7:+89267345 None:intergenic
GTTCTTCAGATGGTACTATC+AGG 0.389104 7:-89271620 MsG0780041294.01.T01:CDS
GAAGACTCAAAATGAAAGTT+GGG 0.391037 7:+89273748 None:intergenic
CCCAGGTACTCTTGTGGGAT+TGG 0.391389 7:-89271025 MsG0780041294.01.T01:intron
CCAGTGGTGGGTCAATATTA+TGG 0.397482 7:-89271720 MsG0780041294.01.T01:CDS
GGATGGACAGGTGGGGAAGA+TGG 0.408251 7:-89267481 MsG0780041294.01.T01:CDS
ATGAACTTGAAATCCAAGAT+TGG 0.410585 7:+89267413 None:intergenic
TGACATATGCAAAGACTTCA+AGG 0.411330 7:-89273574 MsG0780041294.01.T01:CDS
ATGTCCAGAGTTCATAGTTC+AGG 0.435022 7:-89267511 MsG0780041294.01.T01:CDS
GTACTTTAGCTTCTGAAAGT+TGG 0.459371 7:-89268946 MsG0780041294.01.T01:CDS
GAAATCTTCAGCTTCTCCAT+TGG 0.460403 7:-89271188 MsG0780041294.01.T01:CDS
GGACACAAGAACATTTCAAC+AGG 0.464750 7:-89271592 MsG0780041294.01.T01:intron
ATCTTCAGCTTCTCCATTGG+AGG 0.466757 7:-89271185 MsG0780041294.01.T01:CDS
CATCAAAACTAGTATTAGTA+GGG 0.468071 7:+89267346 None:intergenic
TGAGCTTGCCTTGTTCTTCA+GGG 0.472636 7:+89269920 None:intergenic
TTGTGAATGGAAGGGATGAT+TGG 0.474743 7:-89271791 MsG0780041294.01.T01:intron
ATCTGCATATTTGATACCAC+TGG 0.474964 7:-89269874 MsG0780041294.01.T01:CDS
TGCAAAGACTTCAAGGAGAC+CGG 0.477457 7:-89273567 MsG0780041294.01.T01:CDS
CTAAGCTCTTGTTCTTCAGA+TGG 0.477643 7:-89271630 MsG0780041294.01.T01:CDS
ATTATCCCAGGTACTCTTGT+GGG 0.479200 7:-89271030 MsG0780041294.01.T01:intron
CAGATGGTACTATCAGGACT+TGG 0.481372 7:-89271614 MsG0780041294.01.T01:CDS
TAGCAAAGCAACAACAACTT+TGG 0.485620 7:-89273700 MsG0780041294.01.T01:CDS
CAGGTTTCTATTATCAATGC+TGG 0.488118 7:-89271221 MsG0780041294.01.T01:CDS
TGCTGCGGGTTGTGATTCAC+AGG 0.496992 7:-89271144 MsG0780041294.01.T01:intron
CACTTCTAACAACATCTGTA+TGG 0.503113 7:+89267542 None:intergenic
TTGATCGGCGGCACAAATGC+GGG 0.512819 7:-89267640 MsG0780041294.01.T01:CDS
AAGATGGTAGGCTATGTTGT+TGG 0.515760 7:-89267465 MsG0780041294.01.T01:CDS
AATGCCTGAACTATGAACTC+TGG 0.526089 7:+89267507 None:intergenic
CCATAATATTGACCCACCAC+TGG 0.537095 7:+89271720 None:intergenic
GGACAGGTGGGGAAGATGGT+AGG 0.540295 7:-89267477 MsG0780041294.01.T01:CDS
AGTGGAAATTTAGTTGCTGC+GGG 0.541232 7:-89271158 MsG0780041294.01.T01:CDS
GAAACTGTATTCACCAGTGG+TGG 0.542400 7:-89271733 MsG0780041294.01.T01:CDS
AGCATTTGGGACTGGAAAGA+AGG 0.546349 7:-89268998 MsG0780041294.01.T01:CDS
AAGCTGAAGATTTCTTGAGA+TGG 0.552407 7:+89271197 None:intergenic
AAGGGATGATTGGAGTTCAA+TGG 0.555515 7:-89271781 MsG0780041294.01.T01:CDS
TCAATATTATGGAGAGTGCA+AGG 0.560776 7:-89271709 MsG0780041294.01.T01:CDS
ACTAGTATTAGTAGGGGTGA+TGG 0.565765 7:+89267353 None:intergenic
GTTGATCGGCGGCACAAATG+CGG 0.581332 7:-89267641 MsG0780041294.01.T01:CDS
TTCTCCATTGGAGGACCTAG+TGG 0.584400 7:-89271176 MsG0780041294.01.T01:CDS
TCATGTGGATGATGTCACTC+AGG 0.584599 7:-89270967 MsG0780041294.01.T01:intron
AGTGAAACGACAACAATTGG+AGG 0.594927 7:-89267589 MsG0780041294.01.T01:CDS
GAAACTCTAATATGAGTCGA+AGG 0.595574 7:+89273618 None:intergenic
TAGTGGAAATTTAGTTGCTG+CGG 0.595599 7:-89271159 MsG0780041294.01.T01:CDS
AATTATCCCAGGTACTCTTG+TGG 0.598714 7:-89271031 MsG0780041294.01.T01:intron
GAACTATGAACTCTGGACAT+AGG 0.601738 7:+89267514 None:intergenic
AGATGGTACTATCAGGACTT+GGG 0.627841 7:-89271613 MsG0780041294.01.T01:CDS
ATTTCCACTAGGTCCTCCAA+TGG 0.630109 7:+89271172 None:intergenic
GCAGAAGCAATTCTCGAAGG+TGG 0.633134 7:-89267565 MsG0780041294.01.T01:CDS
GCAAAGACTTCAAGGAGACC+GGG 0.633254 7:-89273566 MsG0780041294.01.T01:intron
GGTGCAGAAGCAATTCTCGA+AGG 0.645612 7:-89267568 MsG0780041294.01.T01:CDS
GGATGATTGGAGTTCAATGG+CGG 0.648745 7:-89271778 MsG0780041294.01.T01:CDS
ATCCGTGGGTCATACTCACA+CGG 0.649413 7:-89273651 MsG0780041294.01.T01:CDS
ATCGTCGTTAATATCTCCAG+TGG 0.649496 7:+89269858 None:intergenic
GTGTGAGTATGACCCACGGA+TGG 0.652577 7:+89273653 None:intergenic
CGACGATGATCATCTAGAGT+CGG 0.653681 7:-89269842 MsG0780041294.01.T01:intron
ATCAAAACTAGTATTAGTAG+GGG 0.658117 7:+89267347 None:intergenic
AAACTGTATTCACCAGTGGT+GGG 0.659751 7:-89271732 MsG0780041294.01.T01:CDS
CAATATTATGGAGAGTGCAA+GGG 0.660822 7:-89271708 MsG0780041294.01.T01:CDS
GCAGCAACTAAATTTCCACT+AGG 0.673218 7:+89271161 None:intergenic
GACCGTGTGAGTATGACCCA+CGG 0.674066 7:+89273649 None:intergenic
AGTGAAACTGTATTCACCAG+TGG 0.687068 7:-89271736 MsG0780041294.01.T01:CDS
ATATGAGTCGAAGGTCTGAG+AGG 0.697705 7:+89273627 None:intergenic
ATGCCTAGAAGATTCTCATG+TGG 0.767526 7:-89270982 MsG0780041294.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATAGTTTCTATAAA+AGG - Chr7:89272288-89272307 MsG0780041294.01.T01:intron 10.0%
!! AATATAATTAAAATATCAAG+AGG - Chr7:89268461-89268480 MsG0780041294.01.T01:intron 10.0%
!! ATAAAAATGTCTTATAATTA+AGG + Chr7:89268271-89268290 None:intergenic 10.0%
!! ATGTAAAATAAATAAGTAAT+TGG - Chr7:89268426-89268445 MsG0780041294.01.T01:intron 10.0%
!! ATTACTTTCTTATTAAATTA+TGG + Chr7:89268727-89268746 None:intergenic 10.0%
!! TAAAATTAAATTAAAGTCTT+CGG + Chr7:89273018-89273037 None:intergenic 10.0%
!! TAAATTGTATAAAATTTATG+AGG + Chr7:89273041-89273060 None:intergenic 10.0%
!! TTACTTTCTTATTAAATTAT+GGG + Chr7:89268726-89268745 None:intergenic 10.0%
!!! AATTTTTTTATAAATAAGAG+CGG + Chr7:89268756-89268775 None:intergenic 10.0%
!!! ATAATTATTAATTTTGTTAG+TGG + Chr7:89268033-89268052 None:intergenic 10.0%
!!! CTCTTATTTATAAAAAAATT+TGG - Chr7:89268756-89268775 MsG0780041294.01.T01:intron 10.0%
!!! TAATTATTAATTTTGTTAGT+GGG + Chr7:89268032-89268051 None:intergenic 10.0%
!! AAAAATGTAAATTATTCTTG+TGG + Chr7:89268114-89268133 None:intergenic 15.0%
!! AATACAAGGAATTAAATATT+TGG + Chr7:89270652-89270671 None:intergenic 15.0%
!! TAATTAAGAAAAAAAAAGTG+AGG - Chr7:89268950-89268969 MsG0780041294.01.T01:CDS 15.0%
!! TTATCTGAGTTAAATATATT+TGG + Chr7:89271377-89271396 None:intergenic 15.0%
!! TTCTCTTTAAATTAATAATG+TGG - Chr7:89272754-89272773 MsG0780041294.01.T01:intron 15.0%
!! TTGTTACTAATGTTATTATT+TGG - Chr7:89269567-89269586 MsG0780041294.01.T01:intron 15.0%
!!! ACATTTTTTCAAATTTTTAC+CGG - Chr7:89271912-89271931 MsG0780041294.01.T01:intron 15.0%
!!! ATAGACAACTTTTTATAATA+CGG + Chr7:89268680-89268699 None:intergenic 15.0%
!!! ATCACATTACATTTTTATTT+TGG + Chr7:89272459-89272478 None:intergenic 15.0%
!!! TAAGACATTTTTATCAAATT+AGG - Chr7:89268277-89268296 MsG0780041294.01.T01:intron 15.0%
!!! TAATTAAGTTGTTATCTATA+AGG + Chr7:89269616-89269635 None:intergenic 15.0%
!!! TGATATAATTGTTATTTCTT+TGG - Chr7:89270537-89270556 MsG0780041294.01.T01:intron 15.0%
!! AAAATGTAGGTGATTAATAT+GGG - Chr7:89271588-89271607 MsG0780041294.01.T01:intron 20.0%
!! ACAAATGATAAAATTACACA+TGG + Chr7:89267809-89267828 None:intergenic 20.0%
!! ATAACGTCGATATATAATTA+AGG - Chr7:89268621-89268640 MsG0780041294.01.T01:intron 20.0%
!! ATATATTTGGCCATTTAAAA+AGG + Chr7:89271364-89271383 None:intergenic 20.0%
!! ATATCAAGAGGTTTATATAA+AGG - Chr7:89268473-89268492 MsG0780041294.01.T01:intron 20.0%
!! ATCTTATTGCAGAAAAATAA+TGG - Chr7:89270593-89270612 MsG0780041294.01.T01:intron 20.0%
!! ATTATAAAACTCCCAAATTA+AGG + Chr7:89269302-89269321 None:intergenic 20.0%
!! ATTTAACATATAAATGTGAC+CGG - Chr7:89267937-89267956 MsG0780041294.01.T01:intron 20.0%
!! CACATTTGAAAAAAAAAAAC+AGG - Chr7:89271495-89271514 MsG0780041294.01.T01:intron 20.0%
!! TATCAAGAGGTTTATATAAA+GGG - Chr7:89268474-89268493 MsG0780041294.01.T01:intron 20.0%
!! TTATAAAACTCCCAAATTAA+GGG + Chr7:89269301-89269320 None:intergenic 20.0%
!! TTATAAATCTACAAGGAATA+AGG + Chr7:89270627-89270646 None:intergenic 20.0%
!! TTCATTACTTGTAATTTCAT+TGG - Chr7:89268069-89268088 MsG0780041294.01.T01:intron 20.0%
!!! ACATTACATTTTTATTTTGG+AGG + Chr7:89272456-89272475 None:intergenic 20.0%
!!! ATTTGTCAATTTGCTAAATT+CGG - Chr7:89273196-89273215 MsG0780041294.01.T01:intron 20.0%
!!! ATTTTATACAATTTAGTTCC+TGG - Chr7:89273046-89273065 MsG0780041294.01.T01:intron 20.0%
!!! TAGAATTTGCTTTTTAACTT+TGG - Chr7:89270864-89270883 MsG0780041294.01.T01:intron 20.0%
!!! TATCAATCAGATTTTGTTTT+CGG - Chr7:89269452-89269471 MsG0780041294.01.T01:intron 20.0%
!!! TATTAAATTATGGGTTTTCT+TGG + Chr7:89268717-89268736 None:intergenic 20.0%
!!! TTCCATCATATTTTTTTTGT+TGG + Chr7:89268928-89268947 None:intergenic 20.0%
!!! TTGGGAGTTTTATAATTTTT+GGG - Chr7:89269306-89269325 MsG0780041294.01.T01:intron 20.0%
!!! TTTGGGAGTTTTATAATTTT+TGG - Chr7:89269305-89269324 MsG0780041294.01.T01:intron 20.0%
!!! TTTGGTTTTATAAATCTACA+AGG + Chr7:89270634-89270653 None:intergenic 20.0%
! AAAATACATGTGACAAATTC+AGG + Chr7:89270940-89270959 None:intergenic 25.0%
! AAACAGTCACAAACAATAAA+TGG - Chr7:89269060-89269079 MsG0780041294.01.T01:CDS 25.0%
! AACTCTATCCAAACTAATTT+CGG - Chr7:89269160-89269179 MsG0780041294.01.T01:intron 25.0%
! AAGCATCAATAGTGTAAATA+GGG + Chr7:89271454-89271473 None:intergenic 25.0%
! AGATAAGTAATCAACAGAAT+AGG - Chr7:89271391-89271410 MsG0780041294.01.T01:intron 25.0%
! ATAAATGTGACTGAGTATAT+TGG + Chr7:89267877-89267896 None:intergenic 25.0%
! ATAAGATTTCCACTATTGTT+AGG + Chr7:89270580-89270599 None:intergenic 25.0%
! ATAAGCATATTCCATCAAAT+AGG + Chr7:89272232-89272251 None:intergenic 25.0%
! ATAGTATTCTCTATTGTGAA+GGG - Chr7:89270502-89270521 MsG0780041294.01.T01:intron 25.0%
! ATGGACTTGTAATCAATTAA+AGG - Chr7:89268512-89268531 MsG0780041294.01.T01:intron 25.0%
! ATTAGGAGAATTAAGAAAGT+TGG - Chr7:89268294-89268313 MsG0780041294.01.T01:intron 25.0%
! CAAAATGTAGGTGATTAATA+TGG - Chr7:89271587-89271606 MsG0780041294.01.T01:intron 25.0%
! CGTTGAATAATTAATGTATC+CGG + Chr7:89267959-89267978 None:intergenic 25.0%
! CTTATTCAGTCATAAATACA+TGG - Chr7:89273265-89273284 MsG0780041294.01.T01:intron 25.0%
! GAAAATGAAAATAGACAGTA+AGG - Chr7:89271055-89271074 MsG0780041294.01.T01:intron 25.0%
! GTAGTATATGTAATTTAGCA+TGG + Chr7:89272645-89272664 None:intergenic 25.0%
! TCAAATAAGTCAATGCAAAT+AGG - Chr7:89269834-89269853 MsG0780041294.01.T01:intron 25.0%
! TGTTAGGACTATAGAATAAA+AGG - Chr7:89270376-89270395 MsG0780041294.01.T01:intron 25.0%
! TTAACTCATATTGAAACTCT+CGG - Chr7:89271666-89271685 MsG0780041294.01.T01:CDS 25.0%
! TTAGTAAGGAGTAATTCAAT+TGG - Chr7:89270807-89270826 MsG0780041294.01.T01:intron 25.0%
! TTATTGCAGAAAAATAATGG+AGG - Chr7:89270596-89270615 MsG0780041294.01.T01:intron 25.0%
! TTTATAAACTGCCAACAAAT+GGG - Chr7:89270324-89270343 MsG0780041294.01.T01:intron 25.0%
! TTTATTTGTGCCCTTAATTT+GGG - Chr7:89269288-89269307 MsG0780041294.01.T01:intron 25.0%
!! ATGTATTTTATTACCTTGCT+TGG - Chr7:89270951-89270970 MsG0780041294.01.T01:intron 25.0%
!! CATTGTAGTTCTATTGTAAT+CGG - Chr7:89272348-89272367 MsG0780041294.01.T01:intron 25.0%
!! TAATCTAAAACTTGATCTGA+TGG - Chr7:89270213-89270232 MsG0780041294.01.T01:intron 25.0%
!! TATTCTTTTGTGTAGCATTT+GGG - Chr7:89272114-89272133 MsG0780041294.01.T01:intron 25.0%
!! TGTCTATTTTCATTTTCTGA+GGG + Chr7:89271052-89271071 None:intergenic 25.0%
!! TTATTTATGCAGGATTAGTA+AGG - Chr7:89270793-89270812 MsG0780041294.01.T01:intron 25.0%
!! TTTTATAAACTGCCAACAAA+TGG - Chr7:89270323-89270342 MsG0780041294.01.T01:intron 25.0%
!!! AGGGACATTTTTTTACAAAA+TGG - Chr7:89268493-89268512 MsG0780041294.01.T01:intron 25.0%
!!! ATCAATCAGATTTTGTTTTC+GGG - Chr7:89269453-89269472 MsG0780041294.01.T01:intron 25.0%
!!! ATCATATTTTTTTTGTTGGC+GGG + Chr7:89268924-89268943 None:intergenic 25.0%
!!! ATCCAAGATTGGTTTTTTTT+AGG + Chr7:89273704-89273723 None:intergenic 25.0%
!!! ATGCTCTGAATTTTATGAAT+TGG - Chr7:89272793-89272812 MsG0780041294.01.T01:intron 25.0%
!!! ATTTTTTGCTTGCAAAATGT+AGG - Chr7:89271575-89271594 MsG0780041294.01.T01:intron 25.0%
!!! CATCATATTTTTTTTGTTGG+CGG + Chr7:89268925-89268944 None:intergenic 25.0%
!!! TCCAAGATTGGTTTTTTTTA+GGG + Chr7:89273703-89273722 None:intergenic 25.0%
!!! TTAATTTTCGAAGAAAGCAT+TGG + Chr7:89272425-89272444 None:intergenic 25.0%
!!! TTCTTTGGAATTCAATTCTT+GGG - Chr7:89270552-89270571 MsG0780041294.01.T01:intron 25.0%
!!! TTTCTTTGGAATTCAATTCT+TGG - Chr7:89270551-89270570 MsG0780041294.01.T01:intron 25.0%
!!! TTTTATTTGTGCCCTTAATT+TGG - Chr7:89269287-89269306 MsG0780041294.01.T01:intron 25.0%
!!! TTTTTGGGATTTTTTGTGAA+TGG - Chr7:89269321-89269340 MsG0780041294.01.T01:intron 25.0%
!!! TTTTTTATAAATAAGAGCGG+AGG + Chr7:89268753-89268772 None:intergenic 25.0%
AAAAATGTAATGTGATGCGT+AGG - Chr7:89272463-89272482 MsG0780041294.01.T01:intron 30.0%
AAAAGAAAGAAAGAATGGAG+GGG - Chr7:89272535-89272554 MsG0780041294.01.T01:intron 30.0%
AAATTGAATGTCAAAACTGC+AGG - Chr7:89269885-89269904 MsG0780041294.01.T01:CDS 30.0%
AAGGTAATTGCAATCAGATA+AGG + Chr7:89273322-89273341 None:intergenic 30.0%
AAGTAGTTATACGATGTTAG+AGG - Chr7:89270414-89270433 MsG0780041294.01.T01:intron 30.0%
AAGTCTCCAACTAACAATAT+CGG + Chr7:89270681-89270700 None:intergenic 30.0%
AATTCCACAACTTGAAATCA+TGG - Chr7:89272384-89272403 MsG0780041294.01.T01:intron 30.0%
ACAAACATTCTTTCACCAAA+GGG + Chr7:89270247-89270266 None:intergenic 30.0%
ACAATAAATGGAAGCAATTG+CGG - Chr7:89269072-89269091 MsG0780041294.01.T01:intron 30.0%
ACAATAGAACTACAATGGAT+CGG + Chr7:89272345-89272364 None:intergenic 30.0%
ACATGTAAATTACAAACACC+CGG + Chr7:89267769-89267788 None:intergenic 30.0%
ACTGAATGTCTCTTACAAAT+AGG - Chr7:89268837-89268856 MsG0780041294.01.T01:intron 30.0%
ACTTATTTGAGCTTATCTAG+TGG + Chr7:89269824-89269843 None:intergenic 30.0%
AGAAAAGAAAGAAAGAATGG+AGG - Chr7:89272533-89272552 MsG0780041294.01.T01:intron 30.0%
AGAACAAGAGCTTAGAATAT+TGG + Chr7:89269490-89269509 None:intergenic 30.0%
AGCTTAAGAAGAAAGTGAAA+AGG + Chr7:89269222-89269241 None:intergenic 30.0%
ATAAAATTACACATGGCAAG+AGG + Chr7:89267802-89267821 None:intergenic 30.0%
ATAAGCACGTATATGATTAG+TGG + Chr7:89269655-89269674 None:intergenic 30.0%
ATGAACTTGAAATCCAAGAT+TGG + Chr7:89273715-89273734 None:intergenic 30.0%
CAAGAGAAGCTGAAAAATTA+TGG - Chr7:89273462-89273481 MsG0780041294.01.T01:intron 30.0%
CAAGCATCAATAGTGTAAAT+AGG + Chr7:89271455-89271474 None:intergenic 30.0%
CATAGTATTCTCTATTGTGA+AGG - Chr7:89270501-89270520 MsG0780041294.01.T01:intron 30.0%
CATCAATTCATAGTTGCTAA+TGG - Chr7:89271797-89271816 MsG0780041294.01.T01:intron 30.0%
CGATTACAATAGAACTACAA+TGG + Chr7:89272350-89272369 None:intergenic 30.0%
CGCCAACAAAAAAAATATGA+TGG - Chr7:89268923-89268942 MsG0780041294.01.T01:intron 30.0%
CTTATTTGTTTGAACCTGAA+AGG - Chr7:89272247-89272266 MsG0780041294.01.T01:intron 30.0%
GAAAAGAAAGAAAGAATGGA+GGG - Chr7:89272534-89272553 MsG0780041294.01.T01:intron 30.0%
GAAAGGAAAGATCAATTTGT+TGG + Chr7:89273405-89273424 None:intergenic 30.0%
GAACAAGAGCTTAGAATATT+GGG + Chr7:89269489-89269508 None:intergenic 30.0%
GAAGACTCAAAATGAAAGTT+GGG + Chr7:89267380-89267399 None:intergenic 30.0%
GACTTGTAATCAATTAAAGG+CGG - Chr7:89268515-89268534 MsG0780041294.01.T01:intron 30.0%
GAGGAAATAAAAACCAGTAA+TGG + Chr7:89271705-89271724 None:intergenic 30.0%
GCTGAAAAATTATGGTTGAT+CGG - Chr7:89273470-89273489 MsG0780041294.01.T01:intron 30.0%
TAAACTATATCTAGCCATTG+AGG + Chr7:89271724-89271743 None:intergenic 30.0%
TAAATTATTCTTGTGGCCAT+CGG + Chr7:89268107-89268126 None:intergenic 30.0%
TAACTCATATTGAAACTCTC+GGG - Chr7:89271667-89271686 MsG0780041294.01.T01:CDS 30.0%
TAGTATTCTCTATTGTGAAG+GGG - Chr7:89270503-89270522 MsG0780041294.01.T01:intron 30.0%
TATCTATCTATCTATCACCA+AGG + Chr7:89270027-89270046 None:intergenic 30.0%
TCAACAAAAGCTAATGTATC+TGG - Chr7:89268780-89268799 MsG0780041294.01.T01:intron 30.0%
TCTTCAGTTCAAATATGCAA+AGG + Chr7:89271531-89271550 None:intergenic 30.0%
TGAAATGATTTAGACTGGTA+TGG - Chr7:89270052-89270071 MsG0780041294.01.T01:intron 30.0%
TGAAGACTCAAAATGAAAGT+TGG + Chr7:89267381-89267400 None:intergenic 30.0%
TGGAGAAAAGAAAGAAAGAA+TGG - Chr7:89272530-89272549 MsG0780041294.01.T01:intron 30.0%
TGTTAGAGGAATATGTGTAT+AGG - Chr7:89270428-89270447 MsG0780041294.01.T01:intron 30.0%
TGTTGAAAATGTGTGATTCT+AGG - Chr7:89271172-89271191 MsG0780041294.01.T01:CDS 30.0%
TTATTTCCATTATACTCCCT+CGG + Chr7:89268864-89268883 None:intergenic 30.0%
! CTATAAGGCACCAATAATTA+TGG + Chr7:89269601-89269620 None:intergenic 30.0%
! CTATTCTTTTGTGTAGCATT+TGG - Chr7:89272113-89272132 MsG0780041294.01.T01:intron 30.0%
! CTGTCTATTTTCATTTTCTG+AGG + Chr7:89271053-89271072 None:intergenic 30.0%
! GAATTGATGACTTTGAATTC+AGG + Chr7:89271786-89271805 None:intergenic 30.0%
! GGTTTTCTCTCCATAATTAT+TGG - Chr7:89269588-89269607 MsG0780041294.01.T01:intron 30.0%
! GTTTGTTGAAGGAAAAAGAA+GGG - Chr7:89267711-89267730 MsG0780041294.01.T01:intron 30.0%
! TGTTTGTTGAAGGAAAAAGA+AGG - Chr7:89267710-89267729 MsG0780041294.01.T01:intron 30.0%
! TTATTGAGCTTTTGCTTAAC+TGG - Chr7:89268973-89268992 MsG0780041294.01.T01:CDS 30.0%
! TTTGTCTGTTTGTTTGTTGA+AGG - Chr7:89267700-89267719 MsG0780041294.01.T01:intron 30.0%
! TTTTTCTTGCAAGTTCTTTC+TGG + Chr7:89273749-89273768 None:intergenic 30.0%
!! AAAGATCAATTTGTTGGCTA+AGG + Chr7:89273399-89273418 None:intergenic 30.0%
!! ATCTTGGATTTCAAGTTCAT+TGG - Chr7:89273715-89273734 MsG0780041294.01.T01:CDS 30.0%
!! GGTTATTAATTTGCATGTTG+TGG + Chr7:89271433-89271452 None:intergenic 30.0%
!! TGCAATTTTGAGGATCAATT+TGG - Chr7:89273239-89273258 MsG0780041294.01.T01:intron 30.0%
!! TGGCTTGTTCAAAAAAAGTA+AGG - Chr7:89270827-89270846 MsG0780041294.01.T01:intron 30.0%
!!! ACTGGTTTTTATTTCCTCAA+TGG - Chr7:89271707-89271726 MsG0780041294.01.T01:CDS 30.0%
!!! CATTCTTACGTCAGTTTTTT+AGG + Chr7:89270284-89270303 None:intergenic 30.0%
!!! CCAAGATTGGTTTTTTTTAG+GGG + Chr7:89273702-89273721 None:intergenic 30.0%
!!! TCATATTTTTTTTGTTGGCG+GGG + Chr7:89268923-89268942 None:intergenic 30.0%
AAAAACTGACGTAAGAATGC+AGG - Chr7:89270285-89270304 MsG0780041294.01.T01:intron 35.0%
AAAATGAAAGTTGGGCTTCT+CGG + Chr7:89267372-89267391 None:intergenic 35.0%
AAAGAAAGAAAGAATGGAGG+GGG - Chr7:89272536-89272555 MsG0780041294.01.T01:intron 35.0%
AAAGAAGGGAAAAGACTTTC+TGG - Chr7:89267725-89267744 MsG0780041294.01.T01:intron 35.0%
AAAGTGAAAAGGACGTACTT+TGG + Chr7:89269211-89269230 None:intergenic 35.0%
AAGCTGAAGATTTCTTGAGA+TGG + Chr7:89269931-89269950 None:intergenic 35.0%
AAGCTTGTATACTGCTCTAT+TGG - Chr7:89273351-89273370 MsG0780041294.01.T01:intron 35.0%
AAGTGAAAAGGACGTACTTT+GGG + Chr7:89269210-89269229 None:intergenic 35.0%
AATATCGGACACAGAATACA+AGG + Chr7:89270666-89270685 None:intergenic 35.0%
AATCGTCACCGAAATTAGTT+TGG + Chr7:89269171-89269190 None:intergenic 35.0%
ACACTCTTATGCTCTTAATG+TGG - Chr7:89272012-89272031 MsG0780041294.01.T01:intron 35.0%
AGAGGAATATGTGTATAGGT+AGG - Chr7:89270432-89270451 MsG0780041294.01.T01:intron 35.0%
AGCTTGTATACTGCTCTATT+GGG - Chr7:89273352-89273371 MsG0780041294.01.T01:intron 35.0%
AGGTAGGACAATACAAATGT+TGG - Chr7:89270448-89270467 MsG0780041294.01.T01:intron 35.0%
AGTGCATCATAGCTAATGAA+TGG - Chr7:89271971-89271990 MsG0780041294.01.T01:intron 35.0%
ATATATATGCTCCAGCTTGA+AGG + Chr7:89271115-89271134 None:intergenic 35.0%
ATCTGATTGCAATTACCTTG+TGG - Chr7:89273323-89273342 MsG0780041294.01.T01:intron 35.0%
ATCTGCATATTTGATACCAC+TGG - Chr7:89271251-89271270 MsG0780041294.01.T01:intron 35.0%
CACTCTTATGCTCTTAATGT+GGG - Chr7:89272013-89272032 MsG0780041294.01.T01:intron 35.0%
CACTTCTAACAACATCTGTA+TGG + Chr7:89273586-89273605 None:intergenic 35.0%
CAGGTTTCTATTATCAATGC+TGG - Chr7:89269904-89269923 MsG0780041294.01.T01:CDS 35.0%
CAGTCATAAATACATGGCAT+TGG - Chr7:89273271-89273290 MsG0780041294.01.T01:intron 35.0%
CATATCATTCTACTCGTACA+AGG + Chr7:89270890-89270909 None:intergenic 35.0%
CATTTAATGTGCCACATCAT+AGG - Chr7:89273112-89273131 MsG0780041294.01.T01:intron 35.0%
CCATGTTGACCTAATGAAAA+TGG + Chr7:89270737-89270756 None:intergenic 35.0%
CCCCTAAAAAAAACCAATCT+TGG - Chr7:89273699-89273718 MsG0780041294.01.T01:CDS 35.0%
CCTCTAACAATAGAAGTCAA+CGG + Chr7:89272863-89272882 None:intergenic 35.0%
CTGTGTGAAATGATTTAGAC+TGG - Chr7:89270047-89270066 MsG0780041294.01.T01:intron 35.0%
CTTATTTCCATAAGCTCTTG+AGG + Chr7:89269746-89269765 None:intergenic 35.0%
CTTGTACGAGTAGAATGATA+TGG - Chr7:89270888-89270907 MsG0780041294.01.T01:intron 35.0%
GAAAAATTATGGTTGATCGG+CGG - Chr7:89273473-89273492 MsG0780041294.01.T01:intron 35.0%
GAAACTCTAATATGAGTCGA+AGG + Chr7:89267510-89267529 None:intergenic 35.0%
GACAAACATTCTTTCACCAA+AGG + Chr7:89270248-89270267 None:intergenic 35.0%
GACAAATTCAGGATTTGTCA+AGG + Chr7:89270929-89270948 None:intergenic 35.0%
GATCCTCAAAATTGCAAGTA+TGG + Chr7:89273235-89273254 None:intergenic 35.0%
GCATATTCCATCAAATAGGA+AGG + Chr7:89272228-89272247 None:intergenic 35.0%
GGGTGTTTGTAATTTACATG+TGG - Chr7:89267768-89267787 MsG0780041294.01.T01:intron 35.0%
GTACAATTCATCTCCATTAC+TGG - Chr7:89271689-89271708 MsG0780041294.01.T01:CDS 35.0%
GTCGTTTCACTGTAATTTAC+AGG + Chr7:89273527-89273546 None:intergenic 35.0%
GTTCTTTCCTTCCTATTTGA+TGG - Chr7:89272218-89272237 MsG0780041294.01.T01:intron 35.0%
TACAGTGAAACGACAACAAT+TGG - Chr7:89273533-89273552 MsG0780041294.01.T01:intron 35.0%
TACGAAGTATAACACCTTTC+AGG + Chr7:89272264-89272283 None:intergenic 35.0%
TAGCAAAGCAACAACAACTT+TGG - Chr7:89267425-89267444 MsG0780041294.01.T01:CDS 35.0%
TAGTCAACCTGCAAAAAGAA+AGG + Chr7:89273422-89273441 None:intergenic 35.0%
TAGTGGAAATTTAGTTGCTG+CGG - Chr7:89269966-89269985 MsG0780041294.01.T01:intron 35.0%
TATATATGCTCCAGCTTGAA+GGG + Chr7:89271114-89271133 None:intergenic 35.0%
TATGGGAACATCAATTGCAA+AGG - Chr7:89271605-89271624 MsG0780041294.01.T01:CDS 35.0%
TATTGTAATCGGCCTTACTT+AGG - Chr7:89272359-89272378 MsG0780041294.01.T01:intron 35.0%
TCATGTATAAGTGCAGAGTT+TGG + Chr7:89268571-89268590 None:intergenic 35.0%
TGACATATGCAAAGACTTCA+AGG - Chr7:89267551-89267570 MsG0780041294.01.T01:CDS 35.0%
TGATATGGAGTGATCAACTT+TGG - Chr7:89270903-89270922 MsG0780041294.01.T01:intron 35.0%
TGGAAATAACTTAGCTCAGT+TGG - Chr7:89268875-89268894 MsG0780041294.01.T01:intron 35.0%
TGGTGAAAGAATGTTTGTCT+TGG - Chr7:89270249-89270268 MsG0780041294.01.T01:intron 35.0%
TGTAAGAGGAAACAGTTGTT+AGG - Chr7:89270360-89270379 MsG0780041294.01.T01:intron 35.0%
TTGAAGTCTTTGCATATGTC+AGG + Chr7:89267552-89267571 None:intergenic 35.0%
TTGCAAGAATTGTCAACTGA+AGG + Chr7:89271334-89271353 None:intergenic 35.0%
TTGGCTTCAGTTGAATGATA+TGG - Chr7:89270970-89270989 MsG0780041294.01.T01:CDS 35.0%
! AGCTTCTGAAAGTTGGAATT+TGG - Chr7:89272186-89272205 MsG0780041294.01.T01:intron 35.0%
! ATAAGTGCAGAGTTTGGAAT+TGG + Chr7:89268565-89268584 None:intergenic 35.0%
! CAATATTATGGAGAGTGCAA+GGG - Chr7:89269417-89269436 MsG0780041294.01.T01:intron 35.0%
! CAATTTAGTTCCTGGTGATA+TGG - Chr7:89273054-89273073 MsG0780041294.01.T01:intron 35.0%
! CACGAGCATTTAGAGTTAAA+TGG - Chr7:89268233-89268252 MsG0780041294.01.T01:intron 35.0%
! CATTTTATCCCTGAAGAACA+AGG - Chr7:89271197-89271216 MsG0780041294.01.T01:CDS 35.0%
! CCATTTTCATTAGGTCAACA+TGG - Chr7:89270734-89270753 MsG0780041294.01.T01:intron 35.0%
! CTCTTTAAACCTGATCCTTT+TGG - Chr7:89272577-89272596 MsG0780041294.01.T01:intron 35.0%
! GATCCATACTTGCAATTTTG+AGG - Chr7:89273229-89273248 MsG0780041294.01.T01:intron 35.0%
! GATCTTTCCTTTCTTTTTGC+AGG - Chr7:89273412-89273431 MsG0780041294.01.T01:intron 35.0%
! GTACTTTAGCTTCTGAAAGT+TGG - Chr7:89272179-89272198 MsG0780041294.01.T01:intron 35.0%
! GTTCATAGTTCAGGCATTTT+TGG - Chr7:89273623-89273642 MsG0780041294.01.T01:CDS 35.0%
! TCAATATTATGGAGAGTGCA+AGG - Chr7:89269416-89269435 MsG0780041294.01.T01:intron 35.0%
! TGCTCTTAATGTGGGTTATA+TGG - Chr7:89272021-89272040 MsG0780041294.01.T01:intron 35.0%
! TTGTGGAATTAGCCTAAGTA+AGG + Chr7:89272374-89272393 None:intergenic 35.0%
! TTTCTATGAAGGTGCAATTG+CGG + Chr7:89269043-89269062 None:intergenic 35.0%
!! ATAGTTCAGGCATTTTTGGA+TGG - Chr7:89273627-89273646 MsG0780041294.01.T01:CDS 35.0%
!! ATTTTGCTGACTACAATTCC+GGG - Chr7:89267748-89267767 MsG0780041294.01.T01:intron 35.0%
!! GATTTTGCTGACTACAATTC+CGG - Chr7:89267747-89267766 MsG0780041294.01.T01:intron 35.0%
!! GTTTGTGACTGTTTCTATGA+AGG + Chr7:89269054-89269073 None:intergenic 35.0%
!! TCACAGGTTTGCTTTTCTAT+TGG - Chr7:89269997-89270016 MsG0780041294.01.T01:intron 35.0%
!! TGTCTGTAGCCATTTTCATT+AGG - Chr7:89270725-89270744 MsG0780041294.01.T01:intron 35.0%
!!! ATTGCAAAGGTGGGTTTTTT+TGG - Chr7:89271618-89271637 MsG0780041294.01.T01:CDS 35.0%
!!! ATTTTTCAAGTTCCATCCGT+GGG - Chr7:89267460-89267479 MsG0780041294.01.T01:CDS 35.0%
!!! CTTACGTCAGTTTTTTAGGA+GGG + Chr7:89270280-89270299 None:intergenic 35.0%
!!! GGGATTTTTTGTGAATGGAA+GGG - Chr7:89269326-89269345 MsG0780041294.01.T01:intron 35.0%
!!! TCTTACGTCAGTTTTTTAGG+AGG + Chr7:89270281-89270300 None:intergenic 35.0%
!!! TGGGATTTTTTGTGAATGGA+AGG - Chr7:89269325-89269344 MsG0780041294.01.T01:intron 35.0%
AAAAAAACTCCCCTTCAAGC+TGG - Chr7:89271101-89271120 MsG0780041294.01.T01:intron 40.0%
AAAATGGCTACAGACAGAAC+CGG + Chr7:89270721-89270740 None:intergenic 40.0%
AAACTGTATTCACCAGTGGT+GGG - Chr7:89269393-89269412 MsG0780041294.01.T01:intron 40.0%
AAGAAAGAAAGAATGGAGGG+GGG - Chr7:89272537-89272556 MsG0780041294.01.T01:intron 40.0%
AAGATGGTAGGCTATGTTGT+TGG - Chr7:89273660-89273679 MsG0780041294.01.T01:CDS 40.0%
AAGGGATGATTGGAGTTCAA+TGG - Chr7:89269344-89269363 MsG0780041294.01.T01:intron 40.0%
AATGCCTGAACTATGAACTC+TGG + Chr7:89273621-89273640 None:intergenic 40.0%
AATTATCCCAGGTACTCTTG+TGG - Chr7:89270094-89270113 MsG0780041294.01.T01:intron 40.0%
ACATTGAAGTGAGATCCAAG+TGG + Chr7:89272921-89272940 None:intergenic 40.0%
AGATGGTACTATCAGGACTT+GGG - Chr7:89269512-89269531 MsG0780041294.01.T01:intron 40.0%
AGTGAAACGACAACAATTGG+AGG - Chr7:89273536-89273555 MsG0780041294.01.T01:intron 40.0%
AGTGAAACTGTATTCACCAG+TGG - Chr7:89269389-89269408 MsG0780041294.01.T01:intron 40.0%
AGTGGAAATTTAGTTGCTGC+GGG - Chr7:89269967-89269986 MsG0780041294.01.T01:intron 40.0%
ATATATGCTCCAGCTTGAAG+GGG + Chr7:89271113-89271132 None:intergenic 40.0%
ATCAGCCATAGCAAAAAGAG+AGG + Chr7:89272071-89272090 None:intergenic 40.0%
ATCGTCGTTAATATCTCCAG+TGG + Chr7:89271270-89271289 None:intergenic 40.0%
ATGCCTAGAAGATTCTCATG+TGG - Chr7:89270143-89270162 MsG0780041294.01.T01:intron 40.0%
ATGTCCAGAGTTCATAGTTC+AGG - Chr7:89273614-89273633 MsG0780041294.01.T01:CDS 40.0%
ATTATCCCAGGTACTCTTGT+GGG - Chr7:89270095-89270114 MsG0780041294.01.T01:intron 40.0%
CATCCACATGAGAATCTTCT+AGG + Chr7:89270149-89270168 None:intergenic 40.0%
CATTAGGTCAACATGGCTTT+AGG - Chr7:89270741-89270760 MsG0780041294.01.T01:intron 40.0%
CCATCTGTTAACACTGATGT+CGG + Chr7:89273140-89273159 None:intergenic 40.0%
CGCAAACTGCTTATTTATGC+AGG - Chr7:89270783-89270802 MsG0780041294.01.T01:intron 40.0%
CGTTTAACGTTGTTGGGTAT+GGG + Chr7:89269127-89269146 None:intergenic 40.0%
CTAAGCTCTTGTTCTTCAGA+TGG - Chr7:89269495-89269514 MsG0780041294.01.T01:intron 40.0%
CTACTTCATATTGAAGTGCG+TGG - Chr7:89272661-89272680 MsG0780041294.01.T01:intron 40.0%
CTCATTTCTGCTTCAGTTGA+TGG - Chr7:89271224-89271243 MsG0780041294.01.T01:intron 40.0%
CTGTGTCCGATATTGTTAGT+TGG - Chr7:89270672-89270691 MsG0780041294.01.T01:intron 40.0%
CTGTGTTGTGTAATTATCCC+AGG - Chr7:89270083-89270102 MsG0780041294.01.T01:intron 40.0%
GAAATCTTCAGCTTCTCCAT+TGG - Chr7:89269937-89269956 MsG0780041294.01.T01:intron 40.0%
GAACTATGAACTCTGGACAT+AGG + Chr7:89273614-89273633 None:intergenic 40.0%
GAGAGAGTTATCAGAAGCTT+TGG - Chr7:89271640-89271659 MsG0780041294.01.T01:CDS 40.0%
GCAGCAACTAAATTTCCACT+AGG + Chr7:89269967-89269986 None:intergenic 40.0%
GCATAAATAAGCAGTTTGCG+TGG + Chr7:89270783-89270802 None:intergenic 40.0%
GCTCGTGAAATAGTGAAAAC+TGG + Chr7:89268220-89268239 None:intergenic 40.0%
GGAACATCAATTGCAAAGGT+GGG - Chr7:89271609-89271628 MsG0780041294.01.T01:CDS 40.0%
GGACACAAGAACATTTCAAC+AGG - Chr7:89269533-89269552 MsG0780041294.01.T01:intron 40.0%
GTTCTTCAGATGGTACTATC+AGG - Chr7:89269505-89269524 MsG0780041294.01.T01:intron 40.0%
GTTGATGTAAGATCCACGTA+GGG - Chr7:89273078-89273097 MsG0780041294.01.T01:intron 40.0%
TCAAGCAGCAAAGAGATCAT+GGG + Chr7:89269860-89269879 None:intergenic 40.0%
TCCACTACAGAGTTCAAAGA+AGG - Chr7:89272317-89272336 MsG0780041294.01.T01:intron 40.0%
TCCTTCTTTGAACTCTGTAG+TGG + Chr7:89272321-89272340 None:intergenic 40.0%
TCTCTTACAAATAGGACCGA+GGG - Chr7:89268845-89268864 MsG0780041294.01.T01:intron 40.0%
TCTTGGGTTCCTAACAATAG+TGG - Chr7:89270568-89270587 MsG0780041294.01.T01:intron 40.0%
TGACACATTAACTGAACACG+TGG - Chr7:89272891-89272910 MsG0780041294.01.T01:intron 40.0%
TTCTTTGAACTCTGTAGTGG+AGG + Chr7:89272318-89272337 None:intergenic 40.0%
TTGATGTAAGATCCACGTAG+GGG - Chr7:89273079-89273098 MsG0780041294.01.T01:intron 40.0%
TTGCTTGTCATGAGACAGAA+TGG - Chr7:89272510-89272529 MsG0780041294.01.T01:intron 40.0%
TTGGAATGATTCAGATCCGA+TGG - Chr7:89268088-89268107 MsG0780041294.01.T01:intron 40.0%
TTGTGAATGGAAGGGATGAT+TGG - Chr7:89269334-89269353 MsG0780041294.01.T01:intron 40.0%
TTTGACGAAAATTCCAGGAG+AGG - Chr7:89272704-89272723 MsG0780041294.01.T01:intron 40.0%
! ATACAAGCTTTTGCTCCACA+AGG + Chr7:89273341-89273360 None:intergenic 40.0%
! CAAGCTTTGACGAAAATTCC+AGG - Chr7:89272699-89272718 MsG0780041294.01.T01:intron 40.0%
! CTCTTCCTCTCTTTTTGCTA+TGG - Chr7:89272063-89272082 MsG0780041294.01.T01:intron 40.0%
! CTGAAAAGCACACAAAGCAA+AGG + Chr7:89272622-89272641 None:intergenic 40.0%
! CTGAGGATAGCTTGTGAAAA+CGG + Chr7:89269722-89269741 None:intergenic 40.0%
! CTGGAATTTTCGTCAAAGCT+TGG + Chr7:89272701-89272720 None:intergenic 40.0%
! GGTGGAAGAAAAGGGTTTTA+GGG + Chr7:89269022-89269041 None:intergenic 40.0%
! GTCAACGGAGTGACTATTTT+CGG + Chr7:89272848-89272867 None:intergenic 40.0%
! TTAGCTCAGTTGGTATGCAA+AGG - Chr7:89268885-89268904 MsG0780041294.01.T01:intron 40.0%
!! CAGGTTTGCTTTTCTATTGG+AGG - Chr7:89270000-89270019 MsG0780041294.01.T01:intron 40.0%
!! CCGTTGACTTCTATTGTTAG+AGG - Chr7:89272860-89272879 MsG0780041294.01.T01:intron 40.0%
!! GAAAACTGGTTTGACTTGTG+TGG + Chr7:89268206-89268225 None:intergenic 40.0%
!! GAAGCCATGATTTCAAGTTG+TGG + Chr7:89272391-89272410 None:intergenic 40.0%
!! GTGGAAGAAAAGGGTTTTAG+GGG + Chr7:89269021-89269040 None:intergenic 40.0%
!! TTTTGTGTAGCATTTGGGAC+TGG - Chr7:89272119-89272138 MsG0780041294.01.T01:intron 40.0%
!!! CATTTTTCAAGTTCCATCCG+TGG - Chr7:89267459-89267478 MsG0780041294.01.T01:CDS 40.0%
AAGTCTTCGGATCTCAAGAG+TGG + Chr7:89273005-89273024 None:intergenic 45.0%
AATATCCCGAGCCCATTTGT+TGG + Chr7:89270338-89270357 None:intergenic 45.0%
ACGTTGTTGGGTATGGGAAA+AGG + Chr7:89269121-89269140 None:intergenic 45.0%
AGGAAAGCTCCAAAAGGATC+AGG + Chr7:89272589-89272608 None:intergenic 45.0%
ATATGAGTCGAAGGTCTGAG+AGG + Chr7:89267501-89267520 None:intergenic 45.0%
ATCTTCAGCTTCTCCATTGG+AGG - Chr7:89269940-89269959 MsG0780041294.01.T01:intron 45.0%
ATTTCCACTAGGTCCTCCAA+TGG + Chr7:89269956-89269975 None:intergenic 45.0%
CAGATGGTACTATCAGGACT+TGG - Chr7:89269511-89269530 MsG0780041294.01.T01:intron 45.0%
CATATTGAAGTGCGTGGAGT+TGG - Chr7:89272667-89272686 MsG0780041294.01.T01:intron 45.0%
CATTCAACTGAAGCCAAGCA+AGG + Chr7:89270967-89270986 None:intergenic 45.0%
CCATAATATTGACCCACCAC+TGG + Chr7:89269408-89269427 None:intergenic 45.0%
CCCAACAACGTTAAACGCTT+CGG - Chr7:89269130-89269149 MsG0780041294.01.T01:intron 45.0%
CCGACATCAGTGTTAACAGA+TGG - Chr7:89273137-89273156 MsG0780041294.01.T01:intron 45.0%
CGTTGATGTAAGATCCACGT+AGG - Chr7:89273077-89273096 MsG0780041294.01.T01:intron 45.0%
CTCAAGCAGCAAAGAGATCA+TGG + Chr7:89269861-89269880 None:intergenic 45.0%
CTGATGGAGTTGTAACCCTT+TGG - Chr7:89270229-89270248 MsG0780041294.01.T01:intron 45.0%
GAAACTGTATTCACCAGTGG+TGG - Chr7:89269392-89269411 MsG0780041294.01.T01:intron 45.0%
GCAATTGCGGTGGAAGAAAA+GGG + Chr7:89269030-89269049 None:intergenic 45.0%
GCGTTTAACGTTGTTGGGTA+TGG + Chr7:89269128-89269147 None:intergenic 45.0%
GGATGATTGGAGTTCAATGG+CGG - Chr7:89269347-89269366 MsG0780041294.01.T01:intron 45.0%
GGGAACATCAATTGCAAAGG+TGG - Chr7:89271608-89271627 MsG0780041294.01.T01:CDS 45.0%
GTCTCTTACAAATAGGACCG+AGG - Chr7:89268844-89268863 MsG0780041294.01.T01:intron 45.0%
TACATCAACGCCATATCACC+AGG + Chr7:89273067-89273086 None:intergenic 45.0%
TCATGTGGATGATGTCACTC+AGG - Chr7:89270158-89270177 MsG0780041294.01.T01:intron 45.0%
TGATGTAAGATCCACGTAGG+GGG - Chr7:89273080-89273099 MsG0780041294.01.T01:intron 45.0%
TGATGTCGGAACCTATGATG+TGG + Chr7:89273126-89273145 None:intergenic 45.0%
TGCAAAGACTTCAAGGAGAC+CGG - Chr7:89267558-89267577 MsG0780041294.01.T01:CDS 45.0%
TGCAATTGCGGTGGAAGAAA+AGG + Chr7:89269031-89269050 None:intergenic 45.0%
! AAACTGCCAACAAATGGGCT+CGG - Chr7:89270329-89270348 MsG0780041294.01.T01:intron 45.0%
! ACCGAAGCGTTTAACGTTGT+TGG + Chr7:89269134-89269153 None:intergenic 45.0%
! AGCATTTGGGACTGGAAAGA+AGG - Chr7:89272127-89272146 MsG0780041294.01.T01:intron 45.0%
! ATAGGACCGAGGGAGTATAA+TGG - Chr7:89268855-89268874 MsG0780041294.01.T01:intron 45.0%
! ATGAGCTTGCCTTGTTCTTC+AGG + Chr7:89271209-89271228 None:intergenic 45.0%
! CCGAAGCGTTTAACGTTGTT+GGG + Chr7:89269133-89269152 None:intergenic 45.0%
! CGACGATGATCATCTAGAGT+CGG - Chr7:89271283-89271302 MsG0780041294.01.T01:intron 45.0%
! CGGTGGAAGAAAAGGGTTTT+AGG + Chr7:89269023-89269042 None:intergenic 45.0%
! GCTCGGGATATTTCTGTAAG+AGG - Chr7:89270346-89270365 MsG0780041294.01.T01:intron 45.0%
! GCTTTTCTATTGGAGGACCT+TGG - Chr7:89270007-89270026 MsG0780041294.01.T01:intron 45.0%
! TCAGTTGGTATGCAAAGGCA+GGG - Chr7:89268890-89268909 MsG0780041294.01.T01:intron 45.0%
! TGAGCTTGCCTTGTTCTTCA+GGG + Chr7:89271208-89271227 None:intergenic 45.0%
! TTGAACTCTGTAGTGGAGGT+TGG + Chr7:89272314-89272333 None:intergenic 45.0%
!! ATGGCATTGGTTGAACAAGC+TGG - Chr7:89273284-89273303 MsG0780041294.01.T01:intron 45.0%
!! CATTTTTGGATGGACAGGTG+GGG - Chr7:89273637-89273656 MsG0780041294.01.T01:CDS 45.0%
!! CCAGTGGTGGGTCAATATTA+TGG - Chr7:89269405-89269424 MsG0780041294.01.T01:intron 45.0%
!! GCATTTTTGGATGGACAGGT+GGG - Chr7:89273636-89273655 MsG0780041294.01.T01:CDS 45.0%
!! GGACGTACTTTGGGATGATT+TGG + Chr7:89269201-89269220 None:intergenic 45.0%
!! TCAGGCATTTTTGGATGGAC+AGG - Chr7:89273632-89273651 MsG0780041294.01.T01:CDS 45.0%
!! TGGCATTGGTTGAACAAGCT+GGG - Chr7:89273285-89273304 MsG0780041294.01.T01:intron 45.0%
!! TTGACTTGTGTGGTGTACAC+TGG + Chr7:89268196-89268215 None:intergenic 45.0%
!!! TTCGAGTGACTGGCTTTTTC+CGG - Chr7:89270699-89270718 MsG0780041294.01.T01:intron 45.0%
!! AAAATTTACTAATAATTATT+AGG + Chr7:89267984-89268003 None:intergenic 5.0%
!!! TCTTATTTATAAAAAAATTT+GGG - Chr7:89268757-89268776 MsG0780041294.01.T01:intron 5.0%
AAAGCAAAGGCTCTCCTGGA+AGG + Chr7:89272609-89272628 None:intergenic 50.0%
AATGGAAGCAATTGCGGCCA+TGG - Chr7:89269078-89269097 MsG0780041294.01.T01:intron 50.0%
ACACAAAGCAAAGGCTCTCC+TGG + Chr7:89272613-89272632 None:intergenic 50.0%
ACACATGGCAAGAGGCAACA+AGG + Chr7:89267794-89267813 None:intergenic 50.0%
AGTTGGAGACTTCGAGTGAC+TGG - Chr7:89270689-89270708 MsG0780041294.01.T01:intron 50.0%
ATCCGTGGGTCATACTCACA+CGG - Chr7:89267474-89267493 MsG0780041294.01.T01:CDS 50.0%
CCATAAGCTCTTGAGGTCTG+AGG + Chr7:89269739-89269758 None:intergenic 50.0%
CCTCAGACCTCAAGAGCTTA+TGG - Chr7:89269736-89269755 MsG0780041294.01.T01:intron 50.0%
CCTGGAAGGAAAGCTCCAAA+AGG + Chr7:89272595-89272614 None:intergenic 50.0%
GCAAAGACTTCAAGGAGACC+GGG - Chr7:89267559-89267578 MsG0780041294.01.T01:CDS 50.0%
GCAGAAGCAATTCTCGAAGG+TGG - Chr7:89273560-89273579 MsG0780041294.01.T01:intron 50.0%
GGCACAAATGCGGGTACTTT+GGG - Chr7:89273494-89273513 MsG0780041294.01.T01:intron 50.0%
GGTGCAGAAGCAATTCTCGA+AGG - Chr7:89273557-89273576 MsG0780041294.01.T01:intron 50.0%
TCGTTGTTCCTCGACATCCA+TGG + Chr7:89269098-89269117 None:intergenic 50.0%
TGAACACGTGGTCTTCCACT+TGG - Chr7:89272903-89272922 MsG0780041294.01.T01:intron 50.0%
TGAACATGTAACCCCCTACG+TGG + Chr7:89273094-89273113 None:intergenic 50.0%
TGACACATGCACGTTGACAC+CGG + Chr7:89271934-89271953 None:intergenic 50.0%
TGCAAGTTTCTTCACGACCG+AGG - Chr7:89267603-89267622 MsG0780041294.01.T01:CDS 50.0%
TTCTCCATTGGAGGACCTAG+TGG - Chr7:89269949-89269968 MsG0780041294.01.T01:intron 50.0%
TTCTTTGTCCAACTGCCACC+CGG + Chr7:89267640-89267659 None:intergenic 50.0%
! AACTGCCAACAAATGGGCTC+GGG - Chr7:89270330-89270349 MsG0780041294.01.T01:intron 50.0%
! ACGCCTTCCATCAGAAGTGT+CGG + Chr7:89271834-89271853 None:intergenic 50.0%
! ATACAAGCTCTAGCCTCTCC+TGG + Chr7:89272720-89272739 None:intergenic 50.0%
! CTATGAAGGTGCAATTGCGG+TGG + Chr7:89269040-89269059 None:intergenic 50.0%
! CTCAGTTGGTATGCAAAGGC+AGG - Chr7:89268889-89268908 MsG0780041294.01.T01:intron 50.0%
! TTCAAGGAGACCGGGTATTG+TGG - Chr7:89267567-89267586 MsG0780041294.01.T01:CDS 50.0%
!! CCAATCCCACAAGAGTACCT+GGG + Chr7:89270103-89270122 None:intergenic 50.0%
!! CGGTGCTGCGTTATTATCTC+AGG + Chr7:89272828-89272847 None:intergenic 50.0%
!! GGCATTTTTGGATGGACAGG+TGG - Chr7:89273635-89273654 MsG0780041294.01.T01:CDS 50.0%
!! TCCAATCCCACAAGAGTACC+TGG + Chr7:89270104-89270123 None:intergenic 50.0%
!! TGTAGCACCGACACTTCTGA+TGG - Chr7:89271824-89271843 MsG0780041294.01.T01:intron 50.0%
!!! CCTTTTGGAGCTTTCCTTCC+AGG - Chr7:89272592-89272611 MsG0780041294.01.T01:intron 50.0%
AATTGCGGCCATGGATGTCG+AGG - Chr7:89269087-89269106 MsG0780041294.01.T01:intron 55.0%
ACCCGGAATTGTAGTCGCCT+CGG + Chr7:89267623-89267642 None:intergenic 55.0%
ACCGAGGCGACTACAATTCC+GGG - Chr7:89267619-89267638 MsG0780041294.01.T01:CDS 55.0%
ATCGCCGTAGCCACAATACC+CGG + Chr7:89267580-89267599 None:intergenic 55.0%
CACTGACACGTGTCGAACAC+CGG + Chr7:89271859-89271878 None:intergenic 55.0%
CCCAGGTACTCTTGTGGGAT+TGG - Chr7:89270100-89270119 MsG0780041294.01.T01:intron 55.0%
CGGCACAAATGCGGGTACTT+TGG - Chr7:89273493-89273512 MsG0780041294.01.T01:intron 55.0%
CTACAATTCCGGGTGGCAGT+TGG - Chr7:89267629-89267648 MsG0780041294.01.T01:CDS 55.0%
GACCGAGGCGACTACAATTC+CGG - Chr7:89267618-89267637 MsG0780041294.01.T01:CDS 55.0%
GACCGTGTGAGTATGACCCA+CGG + Chr7:89267479-89267498 None:intergenic 55.0%
GTCAGTGTCGTGTCAGTGAC+CGG + Chr7:89271882-89271901 None:intergenic 55.0%
GTGTGAGTATGACCCACGGA+TGG + Chr7:89267475-89267494 None:intergenic 55.0%
GTTGATCGGCGGCACAAATG+CGG - Chr7:89273484-89273503 MsG0780041294.01.T01:intron 55.0%
TGTTCGACACGTGTCAGTGC+CGG - Chr7:89271860-89271879 MsG0780041294.01.T01:intron 55.0%
TTGATCGGCGGCACAAATGC+GGG - Chr7:89273485-89273504 MsG0780041294.01.T01:intron 55.0%
! CTTCTGATGGAAGGCGTGTC+CGG - Chr7:89271837-89271856 MsG0780041294.01.T01:intron 55.0%
! GAGACCGGGTATTGTGGCTA+CGG - Chr7:89267573-89267592 MsG0780041294.01.T01:CDS 55.0%
! GCACCGACACTTCTGATGGA+AGG - Chr7:89271828-89271847 MsG0780041294.01.T01:intron 55.0%
! TGCTGCGGGTTGTGATTCAC+AGG - Chr7:89269981-89270000 MsG0780041294.01.T01:intron 55.0%
GAGGCGACTACAATTCCGGG+TGG - Chr7:89267622-89267641 MsG0780041294.01.T01:CDS 60.0%
GGACAGGTGGGGAAGATGGT+AGG - Chr7:89273648-89273667 MsG0780041294.01.T01:CDS 60.0%
GGATGGACAGGTGGGGAAGA+TGG - Chr7:89273644-89273663 MsG0780041294.01.T01:CDS 60.0%
! AAAGAGTGTGCGCGCGCTGA+TGG - Chr7:89267677-89267696 MsG0780041294.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 89267360 89273787 89267360 ID=MsG0780041294.01;Name=MsG0780041294.01
Chr7 mRNA 89267360 89273787 89267360 ID=MsG0780041294.01.T01;Parent=MsG0780041294.01;Name=MsG0780041294.01.T01;_AED=0.39;_eAED=0.42;_QI=0|0|0|1|1|1|7|0|406
Chr7 exon 89273567 89273787 89273567 ID=MsG0780041294.01.T01:exon:20655;Parent=MsG0780041294.01.T01
Chr7 exon 89271593 89271800 89271593 ID=MsG0780041294.01.T01:exon:20654;Parent=MsG0780041294.01.T01
Chr7 exon 89271145 89271240 89271145 ID=MsG0780041294.01.T01:exon:20653;Parent=MsG0780041294.01.T01
Chr7 exon 89270968 89271042 89270968 ID=MsG0780041294.01.T01:exon:20652;Parent=MsG0780041294.01.T01
Chr7 exon 89269843 89269953 89269843 ID=MsG0780041294.01.T01:exon:20651;Parent=MsG0780041294.01.T01
Chr7 exon 89268934 89269089 89268934 ID=MsG0780041294.01.T01:exon:20650;Parent=MsG0780041294.01.T01
Chr7 exon 89267360 89267713 89267360 ID=MsG0780041294.01.T01:exon:20649;Parent=MsG0780041294.01.T01
Chr7 CDS 89273567 89273787 89273567 ID=MsG0780041294.01.T01:cds;Parent=MsG0780041294.01.T01
Chr7 CDS 89271593 89271800 89271593 ID=MsG0780041294.01.T01:cds;Parent=MsG0780041294.01.T01
Chr7 CDS 89271145 89271240 89271145 ID=MsG0780041294.01.T01:cds;Parent=MsG0780041294.01.T01
Chr7 CDS 89270968 89271042 89270968 ID=MsG0780041294.01.T01:cds;Parent=MsG0780041294.01.T01
Chr7 CDS 89269843 89269953 89269843 ID=MsG0780041294.01.T01:cds;Parent=MsG0780041294.01.T01
Chr7 CDS 89268934 89269089 89268934 ID=MsG0780041294.01.T01:cds;Parent=MsG0780041294.01.T01
Chr7 CDS 89267360 89267713 89267360 ID=MsG0780041294.01.T01:cds;Parent=MsG0780041294.01.T01
Gene Sequence

>MsG0780041294.01.T01

ATGAAGAATCCGAGAAGCCCAACTTTCATTTTGAGTCTTCAAAAAGAGATTCAAGTTCAACATGATAGCAAAGCAACAACAACTTTGGAGACTGAGACTCATTTTTCAAGTTCCATCCGTGGGTCATACTCACACGGTCCTCTCAGACCTTCGACTCATATTAGAGTTTCATCAAGAATCGATTATCAACCTGACATATGCAAAGACTTCAAGGAGACCGGGGATGATTGGAGTTCAATGGCGGTTTCACTTTCGACGAACGCAGTGAAACTGTATTCACCAGTGGTGGGTCAATATTATGGAGAGTGCAAGGGTCACACTGCAACTATCAATCAGATTTTGTTTTCGGGTCATTCTAATCCCAATATTCTAAGCTCTTGTTCTTCAGATGGTACTATCAGGACTTGGGACACAAGAACATTTCAACAGGTTTCTATTATCAATGCTGGTCCATCTCAAGAAATCTTCAGCTTCTCCATTGGAGGACCTAGTGGAAATTTAGTTGCTGCGGGTTGTGATTCACAGGTACTCTTGTGGGATTGGAGAAATAACAAGCAAATTGCATGCCTAGAAGATTCTCATGTGGATGATGTCACTCAGGTTCATTTTATCCCTGAAGAACAAGGCAAGCTCATTTCTGCTTCAGTTGATGGATTGATCTGCATATTTGATACCACTGGAGATATTAACGACGATGATCATCTAGAGTCGATTTACTCTTCCTCTCTTTTTGCTATGGCTGATTCTTATATTTCATTGATTCGTTCTATTCTTTTGTGTAGCATTTGGGACTGGAAAGAAGGTAGAAATGAAGTAAACTTCTCAGACACGCGTACTTTAGCTTCTGAAAGTTGGAATTTGGATCATGTTGACTACTTCGTTGATTGTCACTACTCAAGAGAAGCTGAAAAATTATGGTTGATCGGCGGCACAAATGCGGGTACTTTGGGTTTCTTTCCTGTAAATTACAGTGAAACGACAACAATTGGAGGTGCAGAAGCAATTCTCGAAGGTGGCCATACAGATGTTGTTAGAAGTGTTCTACCTATGTCCAGAGTTCATAGTTCAGGCATTTTTGGATGGACAGGTGGGGAAGATGGTAGGCTATGTTGTTGGCTGTCTGATGATGATTCCCCTAAAAAAAACCAATCTTGGATTTCAAGTTCATTGGTTATGAAACCAGAAAGAACTTGCAAGAAAAATCGCCATCACCCCTACTAA

Protein sequence

>MsG0780041294.01.T01

MKNPRSPTFILSLQKEIQVQHDSKATTTLETETHFSSSIRGSYSHGPLRPSTHIRVSSRIDYQPDICKDFKETGDDWSSMAVSLSTNAVKLYSPVVGQYYGECKGHTATINQILFSGHSNPNILSSCSSDGTIRTWDTRTFQQVSIINAGPSQEIFSFSIGGPSGNLVAAGCDSQVLLWDWRNNKQIACLEDSHVDDVTQVHFIPEEQGKLISASVDGLICIFDTTGDINDDDHLESIYSSSLFAMADSYISLIRSILLCSIWDWKEGRNEVNFSDTRTLASESWNLDHVDYFVDCHYSREAEKLWLIGGTNAGTLGFFPVNYSETTTIGGAEAILEGGHTDVVRSVLPMSRVHSSGIFGWTGGEDGRLCCWLSDDDSPKKNQSWISSSLVMKPERTCKKNRHHPY*