AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025400.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025400.01.T01 MTR_5g027840 96.693 514 15 2 1 513 1 513 0.0 1018
MsG0580025400.01.T01 MTR_2g100230 49.502 402 191 5 87 486 83 474 1.11e-128 384
MsG0580025400.01.T01 MTR_4g105100 47.493 379 191 4 102 478 200 572 2.00e-117 359
MsG0580025400.01.T01 MTR_6g005550 43.609 399 210 8 87 482 152 538 6.23e-104 327
MsG0580025400.01.T01 MTR_2g032630 43.073 397 215 7 94 487 486 874 3.34e-97 318
MsG0580025400.01.T01 MTR_7g109720 42.857 406 221 7 94 495 222 620 8.94e-94 302
MsG0580025400.01.T01 MTR_4g105100 44.817 328 173 4 102 427 200 521 3.20e-87 278
MsG0580025400.01.T01 MTR_3g083690 39.954 433 237 8 69 486 114 538 5.81e-87 280
MsG0580025400.01.T01 MTR_1g054630 38.839 448 251 8 70 501 124 564 5.41e-86 277
MsG0580025400.01.T01 MTR_4g114120 37.747 506 275 12 13 485 36 534 6.12e-86 279
MsG0580025400.01.T01 MTR_2g007000 42.487 386 210 6 102 482 502 880 2.59e-85 285
MsG0580025400.01.T01 MTR_3g467550 40.278 360 205 4 121 474 105 460 1.27e-80 261
MsG0580025400.01.T01 MTR_3g467550 38.845 381 221 5 102 474 115 491 1.31e-80 262
MsG0580025400.01.T01 MTR_1g095810 38.228 395 227 8 95 479 136 523 3.51e-78 256
MsG0580025400.01.T01 MTR_1g026830 37.468 395 230 8 95 479 138 525 2.27e-76 251
MsG0580025400.01.T01 MTR_4g134170 37.157 401 220 6 107 484 290 681 1.08e-75 252
MsG0580025400.01.T01 MTR_6g005320 36.207 406 225 7 102 484 247 641 1.21e-73 246
MsG0580025400.01.T01 MTR_5g090120 39.045 356 200 9 109 458 86 430 1.04e-72 242
MsG0580025400.01.T01 MTR_3g449250 41.018 334 190 5 119 452 107 433 1.31e-72 241
MsG0580025400.01.T01 MTR_3g449250 41.018 334 190 5 119 452 107 433 4.94e-72 239
MsG0580025400.01.T01 MTR_6g082080 38.781 361 205 8 96 452 2 350 2.72e-66 221
MsG0580025400.01.T01 MTR_7g056830 38.781 361 205 8 96 452 2 350 3.21e-66 221
MsG0580025400.01.T01 MTR_3g467550 37.982 337 197 5 102 430 115 447 8.91e-65 217
MsG0580025400.01.T01 MTR_6g056080 37.746 355 206 6 126 475 127 471 1.13e-60 211
MsG0580025400.01.T01 MTR_1g102410 36.490 359 201 5 119 456 61 413 8.70e-59 206
MsG0580025400.01.T01 MTR_7g076820 31.051 409 259 6 53 458 104 492 1.10e-57 200
MsG0580025400.01.T01 MTR_2g041140 32.710 428 253 10 46 463 95 497 1.89e-57 204
MsG0580025400.01.T01 MTR_4g079320 35.014 357 218 7 105 457 20 366 2.03e-57 204
MsG0580025400.01.T01 MTR_7g076830 33.243 367 225 6 97 458 134 485 2.28e-57 199
MsG0580025400.01.T01 MTR_3g049990 32.678 407 243 8 105 496 153 543 2.59e-57 204
MsG0580025400.01.T01 MTR_7g076800 33.243 367 225 6 97 458 132 483 2.92e-57 199
MsG0580025400.01.T01 MTR_2g066050 32.995 394 241 6 93 478 44 422 1.26e-56 197
MsG0580025400.01.T01 MTR_6g033070 32.987 385 250 7 102 483 138 517 2.38e-54 191
MsG0580025400.01.T01 MTR_4g125970 33.247 388 238 7 95 473 28 403 3.26e-53 185
MsG0580025400.01.T01 MTR_2g039960 33.681 383 234 7 96 473 36 403 4.09e-53 185
MsG0580025400.01.T01 MTR_4g125970 33.247 388 238 7 95 473 45 420 8.69e-53 185
MsG0580025400.01.T01 MTR_2g438110 31.856 361 232 4 97 455 27 375 2.58e-52 183
MsG0580025400.01.T01 MTR_8g027775 32.174 460 259 15 24 450 18 457 3.07e-52 186
MsG0580025400.01.T01 MTR_8g018400 33.333 369 228 6 95 457 28 384 3.56e-51 180
MsG0580025400.01.T01 MTR_2g099620 33.333 369 228 6 95 457 12 368 5.76e-51 179
MsG0580025400.01.T01 MTR_2g099620 33.333 369 228 6 95 457 28 384 9.62e-51 179
MsG0580025400.01.T01 MTR_8g027780 31.947 457 262 15 24 450 24 461 1.24e-50 182
MsG0580025400.01.T01 MTR_3g071620 33.862 378 218 12 104 456 14 384 2.52e-48 176
MsG0580025400.01.T01 MTR_6g039840 32.152 395 244 9 96 473 102 489 1.88e-47 175
MsG0580025400.01.T01 MTR_8g027770 33.600 375 224 11 93 450 190 556 5.15e-46 171
MsG0580025400.01.T01 MTR_7g100820 31.768 362 231 7 120 479 152 499 1.53e-44 166
MsG0580025400.01.T01 MTR_1g012420 32.277 347 208 8 120 457 65 393 2.94e-42 156
MsG0580025400.01.T01 MTR_3g107420 32.565 347 207 8 120 457 65 393 4.63e-42 155
MsG0580025400.01.T01 MTR_8g097000 30.184 434 247 12 41 450 242 643 8.51e-42 159
MsG0580025400.01.T01 MTR_7g057250 29.825 399 210 9 120 452 181 575 1.00e-41 159
MsG0580025400.01.T01 MTR_8g027780 30.505 436 254 15 24 429 24 440 1.38e-41 155
MsG0580025400.01.T01 MTR_2g055850 32.065 368 225 9 101 456 88 442 3.65e-41 155
MsG0580025400.01.T01 MTR_4g010565 32.081 346 210 7 120 457 142 470 1.19e-40 153
MsG0580025400.01.T01 MTR_4g112340 33.133 332 207 8 120 445 115 437 3.69e-40 153
MsG0580025400.01.T01 MTR_1g061970 31.139 395 223 13 89 450 65 443 1.25e-39 150
MsG0580025400.01.T01 MTR_2g063080 30.562 409 225 11 101 455 106 509 7.45e-39 149
MsG0580025400.01.T01 MTR_0915s0010 30.241 291 189 3 119 409 6 282 1.46e-38 142
MsG0580025400.01.T01 MTR_4g059460 27.727 440 241 11 91 456 29 465 2.49e-37 145
MsG0580025400.01.T01 MTR_6g039840 32.166 314 192 7 174 473 7 313 3.04e-37 144
MsG0580025400.01.T01 MTR_3g118120 27.719 469 291 18 23 455 50 506 1.36e-36 142
MsG0580025400.01.T01 MTR_2g043360 27.586 406 222 9 120 456 60 462 1.87e-36 143
MsG0580025400.01.T01 MTR_4g068990 31.536 371 224 10 98 450 62 420 1.98e-35 141
MsG0580025400.01.T01 MTR_4g049910 29.466 431 246 12 93 500 44 439 1.90e-34 135
MsG0580025400.01.T01 MTR_5g092560 32.047 337 212 8 127 456 101 427 2.09e-34 138
MsG0580025400.01.T01 MTR_1g083130 28.607 402 232 11 103 457 25 418 1.09e-31 129
MsG0580025400.01.T01 MTR_5g069330 27.865 384 254 10 102 479 5 371 2.68e-31 125
MsG0580025400.01.T01 MTR_5g069330 27.865 384 254 10 102 479 1 367 3.62e-31 125
MsG0580025400.01.T01 MTR_4g131750 28.571 385 214 15 101 445 79 442 7.67e-25 107
MsG0580025400.01.T01 MTR_1g046570 26.810 373 228 9 119 457 8 369 1.47e-24 105
MsG0580025400.01.T01 MTR_4g112320 31.356 236 155 5 213 445 24 255 2.90e-24 105
MsG0580025400.01.T01 MTR_4g077370 35.577 208 110 6 93 291 242 434 4.15e-24 105
MsG0580025400.01.T01 MTR_4g077370 33.679 193 98 5 105 291 3 171 1.73e-18 88.2
MsG0580025400.01.T01 MTR_8g018370 27.829 327 199 8 133 457 4 295 6.56e-24 102
MsG0580025400.01.T01 MTR_4g459350 33.679 193 119 5 91 276 26 216 3.23e-22 97.1
MsG0580025400.01.T01 MTR_2g043360 25.159 314 166 7 211 456 32 344 9.03e-21 95.5
MsG0580025400.01.T01 MTR_8g032230 36.735 147 84 3 96 240 2 141 8.03e-20 87.0
MsG0580025400.01.T01 MTR_8g042690 24.425 348 228 10 125 456 41 369 1.90e-19 91.3
MsG0580025400.01.T01 MTR_5g092560 29.717 212 137 6 251 456 11 216 2.35e-16 82.4
MsG0580025400.01.T01 MTR_4g068990 31.068 206 127 7 252 450 12 209 3.34e-16 81.6
MsG0580025400.01.T01 MTR_1g050730 23.932 351 252 11 138 482 176 517 7.22e-16 80.9
MsG0580025400.01.T01 MTR_8g080160 23.500 400 257 10 69 456 234 596 1.29e-15 80.5
MsG0580025400.01.T01 MTR_3g107420 32.990 194 107 6 120 304 65 244 5.75e-14 73.2
MsG0580025400.01.T01 MTR_8g062720 34.400 125 77 2 353 477 436 555 2.80e-13 72.8
MsG0580025400.01.T01 MTR_1g023070 33.333 132 61 5 376 504 27 134 6.85e-13 67.4
MsG0580025400.01.T01 MTR_1g023070 33.333 132 61 5 376 504 27 134 7.33e-13 68.2
MsG0580025400.01.T01 MTR_0427s0010 38.095 105 51 1 360 450 73 177 2.22e-12 67.0
MsG0580025400.01.T01 MTR_1g022305 36.792 106 49 3 387 477 222 324 1.08e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025400.01.T01 AT1G31970 77.103 428 97 1 87 513 100 527 0.0 695
MsG0580025400.01.T01 AT5G63120 48.284 408 199 6 77 482 143 540 1.93e-128 387
MsG0580025400.01.T01 AT1G55150 49.871 387 186 4 102 486 98 478 7.50e-126 377
MsG0580025400.01.T01 AT1G55150 49.871 387 186 4 102 486 123 503 6.15e-125 375
MsG0580025400.01.T01 AT5G14610 43.928 387 206 7 105 488 163 541 1.45e-102 322
MsG0580025400.01.T01 AT5G14610 43.928 387 206 7 105 488 163 541 1.59e-102 321
MsG0580025400.01.T01 AT5G14610 43.928 387 206 7 105 488 171 549 1.83e-102 322
MsG0580025400.01.T01 AT3G01540 42.894 387 210 7 105 488 160 538 7.22e-101 316
MsG0580025400.01.T01 AT3G01540 42.894 387 210 7 105 488 160 538 7.22e-101 316
MsG0580025400.01.T01 AT3G01540 42.894 387 210 7 105 488 160 538 7.22e-101 316
MsG0580025400.01.T01 AT3G01540 42.894 387 210 7 105 488 160 538 9.19e-101 316
MsG0580025400.01.T01 AT5G14610 44.032 377 202 6 113 488 42 410 2.33e-100 312
MsG0580025400.01.T01 AT5G14610 44.032 377 202 6 113 488 42 410 2.33e-100 312
MsG0580025400.01.T01 AT3G06480 44.750 400 204 8 87 482 423 809 1.79e-99 323
MsG0580025400.01.T01 AT5G14610 43.832 381 204 7 110 488 237 609 3.83e-98 312
MsG0580025400.01.T01 AT5G63120 45.029 342 176 6 77 416 143 474 3.36e-94 295
MsG0580025400.01.T01 AT5G63120 45.029 342 176 6 77 416 143 474 4.01e-94 295
MsG0580025400.01.T01 AT5G63120 45.029 342 176 6 77 416 143 474 4.01e-94 295
MsG0580025400.01.T01 AT5G63120 45.029 342 176 6 77 416 143 474 4.01e-94 295
MsG0580025400.01.T01 AT2G42520 41.966 417 222 7 84 487 144 553 1.32e-90 290
MsG0580025400.01.T01 AT2G42520 41.966 417 222 7 84 487 144 553 1.32e-90 290
MsG0580025400.01.T01 AT2G42520 41.966 417 222 7 84 487 144 553 1.32e-90 290
MsG0580025400.01.T01 AT3G58570 42.512 414 212 9 92 487 135 540 3.85e-90 289
MsG0580025400.01.T01 AT1G20920 41.855 399 218 7 102 493 190 581 7.15e-90 293
MsG0580025400.01.T01 AT2G47330 42.494 393 215 7 94 482 219 604 7.49e-90 291
MsG0580025400.01.T01 AT1G20920 41.855 399 218 7 102 493 528 919 1.60e-88 295
MsG0580025400.01.T01 AT1G20920 41.855 399 218 7 102 493 528 919 1.60e-88 295
MsG0580025400.01.T01 AT1G20920 41.855 399 218 7 102 493 528 919 1.60e-88 295
MsG0580025400.01.T01 AT1G20920 41.855 399 218 7 102 493 528 919 1.60e-88 295
MsG0580025400.01.T01 AT1G20920 41.855 399 218 7 102 493 528 919 1.60e-88 295
MsG0580025400.01.T01 AT1G20920 41.855 399 218 7 102 493 528 919 1.60e-88 295
MsG0580025400.01.T01 AT3G58510 40.465 430 236 9 70 487 122 543 8.93e-88 282
MsG0580025400.01.T01 AT3G58510 40.465 430 236 9 70 487 122 543 8.93e-88 282
MsG0580025400.01.T01 AT3G58510 40.465 430 236 9 70 487 122 543 8.93e-88 282
MsG0580025400.01.T01 AT5G14610 42.090 335 183 7 105 436 171 497 6.70e-81 261
MsG0580025400.01.T01 AT3G09620 40.155 386 190 8 102 482 396 745 2.67e-80 270
MsG0580025400.01.T01 AT3G09620 40.155 386 190 8 102 482 395 744 2.98e-80 270
MsG0580025400.01.T01 AT5G51280 37.561 410 239 8 95 494 138 540 3.34e-79 259
MsG0580025400.01.T01 AT3G06480 42.274 343 181 8 87 425 423 752 1.14e-76 256
MsG0580025400.01.T01 AT3G22330 41.108 343 193 6 117 458 120 454 1.30e-76 253
MsG0580025400.01.T01 AT4G33370 37.073 410 241 8 95 494 89 491 7.39e-76 249
MsG0580025400.01.T01 AT3G22310 40.974 349 195 7 107 452 120 460 1.34e-75 249
MsG0580025400.01.T01 AT3G22310 40.974 349 195 7 107 452 120 460 1.87e-75 249
MsG0580025400.01.T01 AT2G33730 36.207 406 227 6 102 484 312 708 4.42e-72 243
MsG0580025400.01.T01 AT5G60990 36.712 365 217 7 96 452 2 360 1.09e-66 222
MsG0580025400.01.T01 AT5G26742 39.496 357 205 7 110 461 109 459 1.35e-66 229
MsG0580025400.01.T01 AT5G26742 39.496 357 205 7 110 461 109 459 1.38e-66 229
MsG0580025400.01.T01 AT5G26742 40.729 329 186 6 136 461 44 366 1.70e-65 224
MsG0580025400.01.T01 AT1G28180 37.465 355 214 4 131 484 3 350 1.77e-64 214
MsG0580025400.01.T01 AT5G62190 38.012 342 201 6 120 456 115 450 5.01e-62 215
MsG0580025400.01.T01 AT1G16280 35.792 366 214 6 100 457 55 407 6.17e-61 208
MsG0580025400.01.T01 AT4G00660 34.332 367 221 7 97 458 123 474 2.65e-59 204
MsG0580025400.01.T01 AT4G00660 34.332 367 221 7 97 458 123 474 2.65e-59 204
MsG0580025400.01.T01 AT2G45810 33.607 366 225 5 97 458 146 497 2.58e-57 199
MsG0580025400.01.T01 AT4G16630 34.959 369 216 8 105 463 169 523 3.11e-57 204
MsG0580025400.01.T01 AT3G61240 31.477 413 256 6 53 458 75 467 6.24e-57 197
MsG0580025400.01.T01 AT3G61240 31.477 413 256 6 53 458 75 467 6.24e-57 197
MsG0580025400.01.T01 AT3G02065 32.250 400 255 6 102 492 109 501 5.47e-55 192
MsG0580025400.01.T01 AT3G02065 32.250 400 255 6 102 492 109 501 5.47e-55 192
MsG0580025400.01.T01 AT1G77030 35.180 361 212 8 105 457 30 376 5.71e-54 195
MsG0580025400.01.T01 AT3G19760 32.584 356 226 5 102 455 34 377 1.03e-52 184
MsG0580025400.01.T01 AT3G13920 33.515 367 225 6 96 458 28 379 2.02e-52 183
MsG0580025400.01.T01 AT1G72730 33.621 348 219 4 120 467 60 395 8.08e-52 182
MsG0580025400.01.T01 AT3G13920 33.333 369 228 6 96 458 28 384 8.39e-52 182
MsG0580025400.01.T01 AT3G13920 33.424 368 227 6 96 457 18 373 1.11e-51 181
MsG0580025400.01.T01 AT1G54270 33.333 369 227 6 93 457 25 378 1.22e-51 181
MsG0580025400.01.T01 AT3G13920 33.333 369 228 6 96 458 28 384 2.53e-51 181
MsG0580025400.01.T01 AT3G13920 33.333 369 228 6 96 458 32 388 2.60e-51 181
MsG0580025400.01.T01 AT1G51380 31.742 356 229 5 102 455 21 364 2.65e-51 180
MsG0580025400.01.T01 AT1G54270 33.424 368 227 6 96 457 28 383 7.37e-51 179
MsG0580025400.01.T01 AT3G02065 31.892 370 238 5 130 492 2 364 9.33e-50 175
MsG0580025400.01.T01 AT3G09720 29.810 473 279 13 23 483 80 511 2.15e-48 176
MsG0580025400.01.T01 AT3G09720 29.810 473 279 13 23 483 80 511 2.15e-48 176
MsG0580025400.01.T01 AT4G09730 31.186 388 243 9 102 472 111 491 2.52e-48 177
MsG0580025400.01.T01 AT5G08610 33.871 372 219 11 97 450 376 738 4.13e-46 173
MsG0580025400.01.T01 AT1G71370 32.609 368 230 10 101 456 12 373 6.64e-46 169
MsG0580025400.01.T01 AT5G65900 32.410 361 230 8 103 457 154 506 5.41e-45 167
MsG0580025400.01.T01 AT5G08620 30.734 436 283 11 28 450 7 436 8.45e-45 166
MsG0580025400.01.T01 AT5G63630 32.432 370 236 8 92 450 44 410 1.01e-44 165
MsG0580025400.01.T01 AT5G63630 32.432 370 236 8 92 450 238 604 5.24e-44 166
MsG0580025400.01.T01 AT5G05450 32.764 351 217 8 121 456 36 382 3.77e-43 162
MsG0580025400.01.T01 AT5G11170 32.448 339 214 7 120 455 65 391 4.12e-42 156
MsG0580025400.01.T01 AT5G11200 32.448 339 214 7 120 455 65 391 4.12e-42 156
MsG0580025400.01.T01 AT3G18600 31.350 437 272 12 24 452 19 435 3.94e-41 155
MsG0580025400.01.T01 AT1G63250 31.606 386 249 9 77 450 303 685 2.49e-39 152
MsG0580025400.01.T01 AT3G53110 31.510 384 230 13 93 456 81 451 1.78e-38 147
MsG0580025400.01.T01 AT2G07750 31.606 386 249 9 77 450 350 732 2.26e-38 150
MsG0580025400.01.T01 AT3G16840 28.535 396 216 9 121 452 210 602 2.90e-38 149
MsG0580025400.01.T01 AT3G16840 28.535 396 216 9 121 452 211 603 2.91e-38 149
MsG0580025400.01.T01 AT5G11170 31.975 319 202 7 140 455 2 308 4.63e-37 140
MsG0580025400.01.T01 AT1G12770 27.861 402 242 9 101 454 108 509 1.33e-36 143
MsG0580025400.01.T01 AT1G12770 27.861 402 242 9 101 454 108 509 1.33e-36 143
MsG0580025400.01.T01 AT5G54910 30.529 416 265 12 98 505 66 465 2.59e-36 144
MsG0580025400.01.T01 AT5G11200 29.024 379 215 7 120 455 65 432 9.91e-36 139
MsG0580025400.01.T01 AT2G40700 28.293 410 216 13 120 456 50 454 3.08e-34 136
MsG0580025400.01.T01 AT3G06980 28.087 413 247 16 92 468 363 761 2.77e-33 134
MsG0580025400.01.T01 AT4G34910 28.900 391 229 8 101 446 44 430 3.52e-33 134
MsG0580025400.01.T01 AT1G71280 32.390 318 177 10 110 420 24 310 1.33e-32 127
MsG0580025400.01.T01 AT1G71280 31.661 319 180 9 110 421 24 311 4.08e-32 129
MsG0580025400.01.T01 AT1G51380 30.116 259 167 5 102 358 21 267 2.22e-28 114
MsG0580025400.01.T01 AT1G51380 31.818 220 139 4 102 319 21 231 2.33e-27 112
MsG0580025400.01.T01 AT1G51380 31.818 220 139 4 102 319 21 231 3.80e-27 111
MsG0580025400.01.T01 AT5G19210 29.491 373 205 15 110 445 83 434 6.45e-27 114
MsG0580025400.01.T01 AT4G15850 26.234 385 206 11 139 458 73 444 1.57e-24 107
MsG0580025400.01.T01 AT2G28600 26.923 312 208 8 175 480 194 491 3.50e-19 90.9
MsG0580025400.01.T01 AT5G11200 29.091 220 141 4 238 455 244 450 7.40e-19 89.7
MsG0580025400.01.T01 AT5G11200 32.447 188 116 5 120 304 65 244 5.48e-15 77.8
MsG0580025400.01.T01 AT1G28180 38.053 113 70 0 131 243 3 115 2.42e-18 81.6
MsG0580025400.01.T01 AT5G19210 27.574 272 156 10 202 445 19 277 2.90e-15 77.4
MsG0580025400.01.T01 AT5G19210 27.574 272 156 10 202 445 19 277 2.90e-15 77.4
MsG0580025400.01.T01 AT1G27880 22.907 454 295 11 54 495 215 625 8.32e-14 74.7
MsG0580025400.01.T01 AT1G27880 22.907 454 295 11 54 495 215 625 8.64e-14 74.7
MsG0580025400.01.T01 AT1G59990 32.231 121 77 2 354 474 426 541 1.42e-11 67.4
MsG0580025400.01.T01 AT1G59990 32.231 121 77 2 354 474 426 541 1.45e-11 67.4

Find 132 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTTAGCTCAGGAATTTA+TGG 0.153581 5:-18056028 MsG0580025400.01.T01:CDS
ACCATGTATCGGCTTGTAAT+TGG 0.198915 5:-18054193 MsG0580025400.01.T01:three_prime_UTR
GAAGATTATGTTCATAGAAT+TGG 0.238610 5:-18054859 MsG0580025400.01.T01:CDS
TGGCACACATGTTAAGAAAA+AGG 0.253159 5:-18054576 MsG0580025400.01.T01:intron
ATATAGGAGTCCAAGCTTTA+TGG 0.255279 5:-18054441 MsG0580025400.01.T01:intron
GGTGAAGAGGTTTGAGGATT+CGG 0.263054 5:-18059273 MsG0580025400.01.T01:CDS
CATTATTTATTTCTTCAAAA+AGG 0.265623 5:-18054269 MsG0580025400.01.T01:three_prime_UTR
GTGAAGAGGTTTGAGGATTC+GGG 0.272367 5:-18059272 MsG0580025400.01.T01:CDS
CTAGGGAAGACACTTGCTTT+TGG 0.301902 5:-18058214 MsG0580025400.01.T01:intron
GAAATATTTCAGGGACTTGC+TGG 0.308680 5:-18054659 MsG0580025400.01.T01:intron
TTGATTGGGATTGCGGCAAC+TGG 0.309384 5:-18059155 MsG0580025400.01.T01:CDS
GTGGAATCAGTTTGTTTGTA+TGG 0.320024 5:-18056929 MsG0580025400.01.T01:CDS
ATTCTTCACACATTTGAATA+AGG 0.322677 5:-18054797 MsG0580025400.01.T01:intron
GAGTTCGGTGTTGTTGTTAA+GGG 0.334370 5:+18059529 None:intergenic
TATTCAAGATCTGGTTGAAA+TGG 0.335191 5:-18056672 MsG0580025400.01.T01:CDS
ACATAATCTTCTAGAGTTAG+AGG 0.337678 5:+18054871 None:intergenic
TTCATCCAGGATATTGTCAT+TGG 0.350181 5:-18056707 MsG0580025400.01.T01:intron
TATAGGAGTCCAAGCTTTAT+GGG 0.366000 5:-18054440 MsG0580025400.01.T01:intron
CCACAAAAGATACTTCTTGT+AGG 0.370133 5:+18056639 None:intergenic
ATACTTGGTCAGACATGTTC+TGG 0.373447 5:-18056249 MsG0580025400.01.T01:intron
CCCACTACTATACCCTAAAT+AGG 0.380591 5:-18059704 None:intergenic
TGAGTTCGGTGTTGTTGTTA+AGG 0.388577 5:+18059528 None:intergenic
TTGGATGGTCGTGATTTGAT+TGG 0.393394 5:-18059170 MsG0580025400.01.T01:CDS
AAGATTATGTTCATAGAATT+GGG 0.393407 5:-18054858 MsG0580025400.01.T01:CDS
TTCTGGTTCGGTGGCTAAAA+CGG 0.394777 5:+18059556 None:intergenic
AGTGATTTGTGGTTGTTTGT+TGG 0.401420 5:+18056901 None:intergenic
TGGTGGTGATGTGTCGGTTT+CGG 0.403153 5:-18059354 MsG0580025400.01.T01:CDS
CAAATAGTCCGCTCTATACT+TGG 0.405601 5:-18056264 MsG0580025400.01.T01:CDS
CCATGTATCGGCTTGTAATT+GGG 0.408424 5:-18054192 MsG0580025400.01.T01:three_prime_UTR
CTTCTTCGAAGATTTGAGTT+CGG 0.409490 5:+18059514 None:intergenic
TTGCGAGCCATGGTTGGAAA+TGG 0.411665 5:+18059587 None:intergenic
CTCCGATTCAATCACGTGCT+TGG 0.415933 5:-18059202 MsG0580025400.01.T01:CDS
GGGATTGCGGCAACTGGGTC+AGG 0.417162 5:-18059149 MsG0580025400.01.T01:intron
GCTTTATGGGGCTCACTTCA+AGG 0.417352 5:-18054427 MsG0580025400.01.T01:CDS
TTAGACTTTGGAGCATCAAC+AGG 0.417852 5:+18054399 None:intergenic
TATTTGCATGACATCATGAT+TGG 0.425052 5:+18055890 None:intergenic
TTGATCACTACTTCAACATC+TGG 0.425118 5:+18054904 None:intergenic
TCAAATGTGTGAAGAATGTA+TGG 0.428680 5:+18054803 None:intergenic
CCAAATTTCAAAAGATCGTC+TGG 0.430831 5:+18054596 None:intergenic
GAAAACTTAAAATCATACAT+AGG 0.431801 5:+18054110 None:intergenic
TTCTTTCCAGTCACTACAAT+CGG 0.434432 5:+18059320 None:intergenic
AACTTGTGACAGGTTGTTGT+AGG 0.435320 5:-18055930 MsG0580025400.01.T01:intron
AAAACTTAAAATCATACATA+GGG 0.437566 5:+18054111 None:intergenic
GTTCATAGAATTGGGCGGAC+TGG 0.441574 5:-18054850 MsG0580025400.01.T01:CDS
GAATGGAAGCTGTCCTTTGA+TGG 0.441746 5:-18055421 MsG0580025400.01.T01:intron
CAAATCACTGCACTAAAATC+TGG 0.442805 5:-18056887 MsG0580025400.01.T01:CDS
CCCTCGTAGGAGAGAGCATA+AGG 0.444894 5:+18058119 None:intergenic
CTTTCTCAGGAATCGAGTAT+TGG 0.445276 5:-18055711 MsG0580025400.01.T01:intron
TTGTTGTTAAGGGTTTGTTC+TGG 0.445882 5:+18059539 None:intergenic
CTCTGATGAAGACTAAATAC+TGG 0.446358 5:-18054359 MsG0580025400.01.T01:three_prime_UTR
CCCAATTACAAGCCGATACA+TGG 0.448445 5:+18054192 None:intergenic
ATTCAAGATCTGGTTGAAAT+GGG 0.456701 5:-18056671 MsG0580025400.01.T01:CDS
CATGCAAATAGTTGAGGTAT+TGG 0.459321 5:-18055877 MsG0580025400.01.T01:CDS
TGATGTGGCTGCACGAGGAT+TGG 0.459395 5:-18054932 MsG0580025400.01.T01:CDS
GTTAAGGGTTTGTTCTGGTT+CGG 0.462184 5:+18059544 None:intergenic
TCCCGGTCGTATTCAAGATC+TGG 0.466067 5:-18056681 MsG0580025400.01.T01:CDS
TGGATGGTCGTGATTTGATT+GGG 0.466736 5:-18059169 MsG0580025400.01.T01:CDS
AACCAGATCTTGAATACGAC+CGG 0.475620 5:+18056679 None:intergenic
CCTTATGCTCTCTCCTACGA+GGG 0.480938 5:-18058119 MsG0580025400.01.T01:CDS
GCACTATCATTATTCAAGAA+TGG 0.480956 5:-18055438 MsG0580025400.01.T01:CDS
GAATGTGCTTGAGTGTTGTA+AGG 0.481590 5:-18059240 MsG0580025400.01.T01:CDS
CAACACTCAAGCACATTCTC+AGG 0.482405 5:+18059245 None:intergenic
CGCCGTGTATTTCTCATCTC+CGG 0.502457 5:+18059295 None:intergenic
TTCATAACATGCATAATAGC+TGG 0.502973 5:+18058187 None:intergenic
CTCGAAGCAGAGGCGAAAAG+TGG 0.504589 5:+18059627 None:intergenic
AAATATTTCAGGGACTTGCT+GGG 0.507068 5:-18054658 MsG0580025400.01.T01:intron
AGCAGTTCATCACTTAGCTC+AGG 0.508831 5:-18056037 MsG0580025400.01.T01:CDS
TTCATCTCCATTTCCAACCA+TGG 0.509069 5:-18059594 MsG0580025400.01.T01:exon
TGATGTGTCGGTTTCGGCGT+CGG 0.516818 5:-18059348 MsG0580025400.01.T01:CDS
GCAAAGAGGATTCCGACCCT+TGG 0.519670 5:+18058141 None:intergenic
ACTGGACGAGCTGGTAAGAA+AGG 0.524323 5:-18054832 MsG0580025400.01.T01:CDS
ATAAAACAGCATACCATCAA+AGG 0.542882 5:+18055408 None:intergenic
GTTGGATGAATATTTGAAAG+TGG 0.546670 5:-18054317 MsG0580025400.01.T01:three_prime_UTR
AGCAGATCGGATGCTTGACA+TGG 0.547306 5:-18056295 MsG0580025400.01.T01:CDS
GGCCAAGCACGTGATTGAAT+CGG 0.548949 5:+18059200 None:intergenic
CACGGCGGTGAAGAGGTTTG+AGG 0.550986 5:-18059279 MsG0580025400.01.T01:CDS
GAAGAGCAAGGGTTCTTCCA+AGG 0.552135 5:-18058158 MsG0580025400.01.T01:CDS
GCAGAGGCGAAAAGTGGAAG+AGG 0.552405 5:+18059633 None:intergenic
TGTACAAATGGGAAACCACA+CGG 0.557076 5:-18055679 MsG0580025400.01.T01:CDS
ATGAATAAGCGGAAGAGCAA+GGG 0.557187 5:-18058169 MsG0580025400.01.T01:CDS
TCGTGATTTGATTGGGATTG+CGG 0.558482 5:-18059162 MsG0580025400.01.T01:CDS
ATTGGGCGGACTGGACGAGC+TGG 0.562548 5:-18054841 MsG0580025400.01.T01:CDS
AGTGAAGCAGCTCGAAGCAG+AGG 0.565301 5:+18059617 None:intergenic
GAAGTGAGCCCCATAAAGCT+TGG 0.565873 5:+18054431 None:intergenic
TCAGATGTATTGTGTGATGC+TGG 0.566166 5:-18056965 MsG0580025400.01.T01:CDS
AAGGGTTTGTTCTGGTTCGG+TGG 0.568493 5:+18059547 None:intergenic
TGGTTATGTTCAGTGCTACA+TGG 0.571493 5:-18056065 MsG0580025400.01.T01:CDS
GAATCAGTTTGTTTGTATGG+TGG 0.575683 5:-18056926 MsG0580025400.01.T01:CDS
GATGAACCGATTGTAGTGAC+TGG 0.580919 5:-18059326 MsG0580025400.01.T01:CDS
GATATTGTCATTGGAACTCC+CGG 0.581051 5:-18056698 MsG0580025400.01.T01:CDS
AGAAATACACGGCGGTGAAG+AGG 0.583314 5:-18059286 MsG0580025400.01.T01:CDS
GCCTTATGCTCTCTCCTACG+AGG 0.583509 5:-18058120 MsG0580025400.01.T01:CDS
TGGAAAGCAGTGTCTATAAG+TGG 0.585177 5:-18055489 MsG0580025400.01.T01:CDS
GTAGTGACTGGAAAGAATGC+CGG 0.586013 5:-18059314 MsG0580025400.01.T01:CDS
GCACGTGATTGAATCGGAGA+AGG 0.586015 5:+18059206 None:intergenic
GCATCCGATCTGCTTCATCA+AGG 0.595521 5:+18056304 None:intergenic
TGATTGGGATTGCGGCAACT+GGG 0.598535 5:-18059154 MsG0580025400.01.T01:CDS
TGTGATGCTGGTAAATCTTG+TGG 0.600721 5:-18056953 MsG0580025400.01.T01:CDS
AAGAGCAAGGGTTCTTCCAA+GGG 0.602731 5:-18058157 MsG0580025400.01.T01:CDS
TGATGTCATGCAAATAGTTG+AGG 0.605250 5:-18055883 MsG0580025400.01.T01:CDS
TATGAATAAGCGGAAGAGCA+AGG 0.607867 5:-18058170 MsG0580025400.01.T01:CDS
GCTAAGTGATGAACTGCTAA+CGG 0.609098 5:+18056042 None:intergenic
GCTACTGATGTGGCTGCACG+AGG 0.611530 5:-18054937 MsG0580025400.01.T01:CDS
GTACAAATGGGAAACCACAC+GGG 0.611553 5:-18055678 MsG0580025400.01.T01:CDS
AATATTTCAGGGACTTGCTG+GGG 0.614802 5:-18054657 MsG0580025400.01.T01:intron
AATGTGCTTGAGTGTTGTAA+GGG 0.615083 5:-18059239 MsG0580025400.01.T01:CDS
GCAAGGGTTCTTCCAAGGGT+CGG 0.615294 5:-18058153 MsG0580025400.01.T01:CDS
TTATGCATGTTATGAATAAG+CGG 0.617150 5:-18058180 MsG0580025400.01.T01:CDS
AAATCGGAGGAAAGCAATGG+TGG 0.620905 5:-18059371 MsG0580025400.01.T01:CDS
GTGGAGAAAATGCTTCAACA+AGG 0.622499 5:-18055656 MsG0580025400.01.T01:CDS
AGGTCCTTGATGAAGCAGAT+CGG 0.623442 5:-18056308 MsG0580025400.01.T01:CDS
TGCTGGTAAATCTTGTGGTG+TGG 0.625650 5:-18056948 MsG0580025400.01.T01:CDS
TGGAGAAAATGCTTCAACAA+GGG 0.625673 5:-18055655 MsG0580025400.01.T01:intron
ACAGGTTGTTGTAGGCTCAG+AGG 0.629287 5:-18055922 MsG0580025400.01.T01:intron
TGGGCAGATTGCTACTGATG+TGG 0.630709 5:-18054947 MsG0580025400.01.T01:intron
GAGGCGAAAAGTGGAAGAGG+TGG 0.631219 5:+18059636 None:intergenic
GGAGAGAGCATAAGGCAAAG+AGG 0.632906 5:+18058127 None:intergenic
GCAGATCGGATGCTTGACAT+GGG 0.636956 5:-18056294 MsG0580025400.01.T01:CDS
TGTTGAGCTAGCTCCCTCGT+AGG 0.646096 5:+18058106 None:intergenic
AACAAATCGGAGGAAAGCAA+TGG 0.651884 5:-18059374 MsG0580025400.01.T01:CDS
ATAGGAGTCCAAGCTTTATG+GGG 0.655015 5:-18054439 MsG0580025400.01.T01:intron
ACCAGATCTTGAATACGACC+GGG 0.658494 5:+18056680 None:intergenic
CAAATGGGAAACCACACGGG+TGG 0.659561 5:-18055675 MsG0580025400.01.T01:CDS
TGAAGAGGTTTGAGGATTCG+GGG 0.659903 5:-18059271 MsG0580025400.01.T01:CDS
AAGCAATGGTGGTGATGTGT+CGG 0.664546 5:-18059360 MsG0580025400.01.T01:CDS
AAACTTAAAATCATACATAG+GGG 0.674503 5:+18054112 None:intergenic
ATCACAGCATGAGCGCACAA+AGG 0.688375 5:-18055460 MsG0580025400.01.T01:CDS
CAAATGTGTGAAGAATGTAT+GGG 0.699602 5:+18054804 None:intergenic
TGCCGGAGATGAGAAATACA+CGG 0.715333 5:-18059297 MsG0580025400.01.T01:CDS
ATGTCTGACCAAGTATAGAG+CGG 0.717626 5:+18056256 None:intergenic
ATTATGTTCATAGAATTGGG+CGG 0.720125 5:-18054855 MsG0580025400.01.T01:CDS
CGGAGATGAGAAATACACGG+CGG 0.831076 5:-18059294 MsG0580025400.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATTGTCTATAAAAT+AGG + Chr5:18057001-18057020 None:intergenic 10.0%
!! ATAATATAATAATATATACC+TGG - Chr5:18058160-18058179 MsG0580025400.01.T01:CDS 10.0%
!!! TTCAATGAATATATTTTATT+TGG - Chr5:18057186-18057205 MsG0580025400.01.T01:intron 10.0%
!! AAAACTTAAAATCATACATA+GGG + Chr5:18059643-18059662 None:intergenic 15.0%
!! CTTATATATAACAGAAATAA+AGG + Chr5:18059032-18059051 None:intergenic 15.0%
!!! AAATGTTATTTTTTAGACTT+TGG + Chr5:18059367-18059386 None:intergenic 15.0%
!!! ACGTTTAATTTTTATTTGTT+TGG - Chr5:18055756-18055775 MsG0580025400.01.T01:intron 15.0%
!!! AGAGAGATTTTATAATTTTT+AGG + Chr5:18054091-18054110 None:intergenic 15.0%
!!! ATGAATATATTTTATTTGGT+TGG - Chr5:18057190-18057209 MsG0580025400.01.T01:intron 15.0%
!!! CATTATTTATTTCTTCAAAA+AGG - Chr5:18059482-18059501 MsG0580025400.01.T01:CDS 15.0%
!!! GAGAGATTTTATAATTTTTA+GGG + Chr5:18054090-18054109 None:intergenic 15.0%
!!! GCTTTTTAATTTTTGTAATA+TGG - Chr5:18055415-18055434 MsG0580025400.01.T01:intron 15.0%
!!! TTATTTCTGTTATATATAAG+TGG - Chr5:18059032-18059051 MsG0580025400.01.T01:intron 15.0%
!! AAAAAAATATCCAAAGAGAA+AGG + Chr5:18055853-18055872 None:intergenic 20.0%
!! AAAATAACAATTATCCAACA+TGG + Chr5:18058482-18058501 None:intergenic 20.0%
!! AAACTTAAAATCATACATAG+GGG + Chr5:18059642-18059661 None:intergenic 20.0%
!! AAGATTATGTTCATAGAATT+GGG - Chr5:18058893-18058912 MsG0580025400.01.T01:intron 20.0%
!! ATAACTTTCTGCTTTAATAT+AGG - Chr5:18059294-18059313 MsG0580025400.01.T01:CDS 20.0%
!! ATAAGTTAAATAATGTCTTC+AGG - Chr5:18058236-18058255 MsG0580025400.01.T01:intron 20.0%
!! GAAAACTTAAAATCATACAT+AGG + Chr5:18059644-18059663 None:intergenic 20.0%
!! TAAGTTAAAACAATGTAATG+AGG + Chr5:18056443-18056462 None:intergenic 20.0%
!! TAAGTTAAATAATGTCTTCA+GGG - Chr5:18058237-18058256 MsG0580025400.01.T01:intron 20.0%
!! TAATTGTCTATAAAATAGGA+CGG + Chr5:18056997-18057016 None:intergenic 20.0%
!! TCAAAAAGGAAATAAGATAA+TGG - Chr5:18059496-18059515 MsG0580025400.01.T01:CDS 20.0%
!! TTATACTTAAACTGCAAATT+AGG + Chr5:18054851-18054870 None:intergenic 20.0%
!! TTGTATAAATTGAATGAACT+TGG - Chr5:18055471-18055490 MsG0580025400.01.T01:CDS 20.0%
!!! ATCTTTTCTTTTTGTTACTA+GGG - Chr5:18055520-18055539 MsG0580025400.01.T01:intron 20.0%
!!! ATTTGTTTTCTCAATCTAAT+GGG - Chr5:18058785-18058804 MsG0580025400.01.T01:intron 20.0%
!!! TAAGTTTTCAAAAACATTTG+AGG - Chr5:18059655-18059674 MsG0580025400.01.T01:five_prime_UTR 20.0%
!!! TATCTTTTCTTTTTGTTACT+AGG - Chr5:18055519-18055538 MsG0580025400.01.T01:intron 20.0%
!!! TATTTGTTTTCTCAATCTAA+TGG - Chr5:18058784-18058803 MsG0580025400.01.T01:intron 20.0%
!!! TCTTTTTTTTTCTTTCATAG+TGG - Chr5:18056163-18056182 MsG0580025400.01.T01:intron 20.0%
!!! TTTAAACAAAGGGTTAATTT+TGG - Chr5:18056085-18056104 MsG0580025400.01.T01:intron 20.0%
! AAATTCAGTAGAAATGCAAA+TGG + Chr5:18057287-18057306 None:intergenic 25.0%
! AAGATATTTAAACTTGTGAC+AGG - Chr5:18057811-18057830 MsG0580025400.01.T01:intron 25.0%
! AAGTTAAATAATGTCTTCAG+GGG - Chr5:18058238-18058257 MsG0580025400.01.T01:intron 25.0%
! AGAAAAAAGCTCCATAAATA+TGG + Chr5:18056974-18056993 None:intergenic 25.0%
! AGAAAACAATCAAAAGTTGA+TGG + Chr5:18058445-18058464 None:intergenic 25.0%
! AGTGAAACAAAAAATAAGCT+GGG + Chr5:18057634-18057653 None:intergenic 25.0%
! ATAAAAAACATCATCTTAGG+AGG + Chr5:18058554-18058573 None:intergenic 25.0%
! ATAACAGAAATAAAGGACAA+GGG + Chr5:18059025-18059044 None:intergenic 25.0%
! ATATTTACAAATCCACACTT+TGG + Chr5:18055502-18055521 None:intergenic 25.0%
! ATTAAGCTGTTTATCCAAAT+AGG - Chr5:18055233-18055252 MsG0580025400.01.T01:intron 25.0%
! ATTAGGTTATTTATCCAAAC+AGG + Chr5:18054834-18054853 None:intergenic 25.0%
! ATTCTTCACACATTTGAATA+AGG - Chr5:18058954-18058973 MsG0580025400.01.T01:intron 25.0%
! CCACGAACAAAAAAAATATT+CGG + Chr5:18056294-18056313 None:intergenic 25.0%
! GAAGATTATGTTCATAGAAT+TGG - Chr5:18058892-18058911 MsG0580025400.01.T01:intron 25.0%
! GAATGAATGGAAATATTTCA+GGG - Chr5:18059083-18059102 MsG0580025400.01.T01:intron 25.0%
! GGAATGTTATAACCAAAATT+TGG - Chr5:18056486-18056505 MsG0580025400.01.T01:intron 25.0%
! GTAAAGCTATAACTTCAAAA+GGG + Chr5:18058605-18058624 None:intergenic 25.0%
! TAAAATCTTGTATCTTTCTC+AGG - Chr5:18058027-18058046 MsG0580025400.01.T01:intron 25.0%
! TATAACAGAAATAAAGGACA+AGG + Chr5:18059026-18059045 None:intergenic 25.0%
! TGAATGAATGGAAATATTTC+AGG - Chr5:18059082-18059101 MsG0580025400.01.T01:intron 25.0%
! TGGATAAAAAACATCATCTT+AGG + Chr5:18058557-18058576 None:intergenic 25.0%
! TGTAAAGCTATAACTTCAAA+AGG + Chr5:18058606-18058625 None:intergenic 25.0%
! TTAAGCTGTTTATCCAAATA+GGG - Chr5:18055234-18055253 MsG0580025400.01.T01:intron 25.0%
! TTAGGTTATTTATCCAAACA+GGG + Chr5:18054833-18054852 None:intergenic 25.0%
! TTATGCATGTTATGAATAAG+CGG - Chr5:18055571-18055590 MsG0580025400.01.T01:intron 25.0%
!! AAATATCTGCAACCAAATTT+TGG + Chr5:18056501-18056520 None:intergenic 25.0%
!! AATGAGTTGGAAATTGTTAA+GGG - Chr5:18055972-18055991 MsG0580025400.01.T01:intron 25.0%
!! ATGAAGATACATACTTTTAC+AGG + Chr5:18057757-18057776 None:intergenic 25.0%
!! CTTGGATTTGATTATCATTT+TGG - Chr5:18054649-18054668 MsG0580025400.01.T01:CDS 25.0%
!! GAAAACAATCAAAAGTTGAT+GGG + Chr5:18058444-18058463 None:intergenic 25.0%
!! TCATTTGGTGAATCAATAAA+TGG + Chr5:18056677-18056696 None:intergenic 25.0%
!! TGAAGATACATACTTTTACA+GGG + Chr5:18057756-18057775 None:intergenic 25.0%
!! TTTGATAGTACCTGTAAATT+GGG - Chr5:18056546-18056565 MsG0580025400.01.T01:intron 25.0%
!!! AGTGGAAAATTGTTTTTGAT+TGG - Chr5:18055932-18055951 MsG0580025400.01.T01:intron 25.0%
!!! ATACAGTAGAATGTTATTTC+TGG - Chr5:18056618-18056637 MsG0580025400.01.T01:intron 25.0%
!!! ATTTTTGTTGTACCATGTAT+CGG - Chr5:18059547-18059566 MsG0580025400.01.T01:CDS 25.0%
!!! CTTGTTTTCATAAGCTATAT+TGG - Chr5:18054927-18054946 MsG0580025400.01.T01:CDS 25.0%
!!! GACTTACATTTATTTTTGGT+TGG - Chr5:18059416-18059435 MsG0580025400.01.T01:CDS 25.0%
!!! GGTTTTTGTTTTGTACAAAT+GGG - Chr5:18058061-18058080 MsG0580025400.01.T01:intron 25.0%
!!! GTGGAAAATTGTTTTTGATT+GGG - Chr5:18055933-18055952 MsG0580025400.01.T01:intron 25.0%
!!! TACAAGATTTTAGCAAAAAG+AGG + Chr5:18058019-18058038 None:intergenic 25.0%
!!! TGGTGACTTACATTTATTTT+TGG - Chr5:18059412-18059431 MsG0580025400.01.T01:CDS 25.0%
!!! TGGTTTTTGTTTTGTACAAA+TGG - Chr5:18058060-18058079 MsG0580025400.01.T01:intron 25.0%
!!! TTTTGATAGTACCTGTAAAT+TGG - Chr5:18056545-18056564 MsG0580025400.01.T01:intron 25.0%
!!! TTTTGGTTATAACATTCCAT+TGG + Chr5:18056484-18056503 None:intergenic 25.0%
AAAAGTAACATCCTCTCTAT+TGG + Chr5:18056594-18056613 None:intergenic 30.0%
AAAATTGGAAAGGGGAAAAT+GGG - Chr5:18056125-18056144 MsG0580025400.01.T01:intron 30.0%
AAAGTAACATCCTCTCTATT+GGG + Chr5:18056593-18056612 None:intergenic 30.0%
AAGATATCCTTAAGAGCTTA+TGG + Chr5:18055108-18055127 None:intergenic 30.0%
AATTGTAGAACCCAATTTAC+AGG + Chr5:18056559-18056578 None:intergenic 30.0%
AATTTCCCACTCATAATATC+AGG + Chr5:18056000-18056019 None:intergenic 30.0%
ACAGAATACAAACCAACAAA+AGG + Chr5:18056917-18056936 None:intergenic 30.0%
ACGACTATAAAATAGACATG+TGG + Chr5:18057334-18057353 None:intergenic 30.0%
ACTGTCTTAAATTTCCAACT+GGG - Chr5:18056643-18056662 MsG0580025400.01.T01:CDS 30.0%
ATAAAACAGCATACCATCAA+AGG + Chr5:18058346-18058365 None:intergenic 30.0%
ATACAAACCAACAAAAGGAA+AGG + Chr5:18056912-18056931 None:intergenic 30.0%
ATCCTTTACTTCTATGAACT+TGG - Chr5:18055827-18055846 MsG0580025400.01.T01:CDS 30.0%
ATTATGTTCATAGAATTGGG+CGG - Chr5:18058896-18058915 MsG0580025400.01.T01:intron 30.0%
ATTCAAGATCTGGTTGAAAT+GGG - Chr5:18057080-18057099 MsG0580025400.01.T01:intron 30.0%
ATTCTGTCAGATACAAGTTA+CGG - Chr5:18056930-18056949 MsG0580025400.01.T01:CDS 30.0%
CAAAACAGAATTCTGACATT+CGG + Chr5:18057148-18057167 None:intergenic 30.0%
CAAATGTGTGAAGAATGTAT+GGG + Chr5:18058950-18058969 None:intergenic 30.0%
CAATATCCTGGATGAAAAAA+AGG + Chr5:18057040-18057059 None:intergenic 30.0%
CAGTGAAACAAAAAATAAGC+TGG + Chr5:18057635-18057654 None:intergenic 30.0%
CTGGTTTACTTCCATATTTA+TGG - Chr5:18056960-18056979 MsG0580025400.01.T01:CDS 30.0%
CTTATTTCCATAAGCTCTTA+AGG - Chr5:18055098-18055117 MsG0580025400.01.T01:intron 30.0%
GAAATAAGAACAGAAGAATC+TGG + Chr5:18058577-18058596 None:intergenic 30.0%
GATACATGGTACAACAAAAA+TGG + Chr5:18059548-18059567 None:intergenic 30.0%
GCACTATCATTATTCAAGAA+TGG - Chr5:18058313-18058332 MsG0580025400.01.T01:intron 30.0%
GTAGGAATGAAAATTGGAAA+GGG - Chr5:18056116-18056135 MsG0580025400.01.T01:intron 30.0%
GTTGGATGAATATTTGAAAG+TGG - Chr5:18059434-18059453 MsG0580025400.01.T01:CDS 30.0%
TAGCAATATTGCATCATGTA+TGG - Chr5:18055791-18055810 MsG0580025400.01.T01:intron 30.0%
TAGCGTATTAGCAAATGTAT+TGG + Chr5:18057231-18057250 None:intergenic 30.0%
TAGGAATGAAAATTGGAAAG+GGG - Chr5:18056117-18056136 MsG0580025400.01.T01:intron 30.0%
TATGCTCAGAAGAAATTAGA+AGG + Chr5:18057585-18057604 None:intergenic 30.0%
TATTCAAGATCTGGTTGAAA+TGG - Chr5:18057079-18057098 MsG0580025400.01.T01:intron 30.0%
TATTTGCATGACATCATGAT+TGG + Chr5:18057864-18057883 None:intergenic 30.0%
TCAAATGTGTGAAGAATGTA+TGG + Chr5:18058951-18058970 None:intergenic 30.0%
TCACAAGTGTTTATGTTAGT+AGG - Chr5:18055023-18055042 MsG0580025400.01.T01:intron 30.0%
TTCATAACATGCATAATAGC+TGG + Chr5:18055567-18055586 None:intergenic 30.0%
TTCATGGAAAAAATCGAAAC+TGG + Chr5:18059233-18059252 None:intergenic 30.0%
TTGATGTTTACTGCATTACT+TGG - Chr5:18054631-18054650 MsG0580025400.01.T01:CDS 30.0%
TTGTTATACGTGTTATAAGC+AGG + Chr5:18057396-18057415 None:intergenic 30.0%
! AAAAGCAACCTTTTGTATCA+AGG + Chr5:18056359-18056378 None:intergenic 30.0%
! AAAGCAACCTTTTGTATCAA+GGG + Chr5:18056358-18056377 None:intergenic 30.0%
! AAGTGGATTTGAATTCATCT+AGG + Chr5:18058637-18058656 None:intergenic 30.0%
! ACAAAAAATGGTAATGCACA+AGG + Chr5:18057420-18057439 None:intergenic 30.0%
! ACCAGTTCATACATAGTTTT+TGG + Chr5:18058409-18058428 None:intergenic 30.0%
! ATACATACTTTTACAGGGTT+GGG + Chr5:18057751-18057770 None:intergenic 30.0%
! CACAGCTACATTTTATCATT+TGG + Chr5:18056692-18056711 None:intergenic 30.0%
! GAAGAAAAAGCACAACAAAT+CGG - Chr5:18054364-18054383 MsG0580025400.01.T01:three_prime_UTR 30.0%
! GAATGAGTTGGAAATTGTTA+AGG - Chr5:18055971-18055990 MsG0580025400.01.T01:intron 30.0%
! GGATTTGATTATCATTTTGG+TGG - Chr5:18054652-18054671 MsG0580025400.01.T01:intron 30.0%
! TACTGAATTTTCTTTGATCC+TGG - Chr5:18057297-18057316 MsG0580025400.01.T01:intron 30.0%
! TTCTACATTTTCACAACAGT+TGG + Chr5:18055366-18055385 None:intergenic 30.0%
! TTGTTTTCTCTGCAATACTT+TGG - Chr5:18058456-18058475 MsG0580025400.01.T01:intron 30.0%
!! ACATAATCTTCTAGAGTTAG+AGG + Chr5:18058883-18058902 None:intergenic 30.0%
!! ACTTTTGACTCTCCTATTTA+GGG + Chr5:18054062-18054081 None:intergenic 30.0%
!! AGTTTTATATCTCTACACTG+AGG + Chr5:18055260-18055279 None:intergenic 30.0%
!! ATCTGTTTCTATCTTGACAA+TGG - Chr5:18056237-18056256 MsG0580025400.01.T01:intron 30.0%
!! ATTTTTCTAGTAAAGCAAGC+AGG + Chr5:18057922-18057941 None:intergenic 30.0%
!! TCTGTTTCTATCTTGACAAT+GGG - Chr5:18056238-18056257 MsG0580025400.01.T01:intron 30.0%
!!! CCGAATATTTTTTTTGTTCG+TGG - Chr5:18056291-18056310 MsG0580025400.01.T01:CDS 30.0%
!!! GAAACATCTAGCTTTTGATT+GGG - Chr5:18055889-18055908 MsG0580025400.01.T01:CDS 30.0%
!!! GCATTACCATTTTTTGTTCT+AGG - Chr5:18057423-18057442 MsG0580025400.01.T01:intron 30.0%
!!! TGAAACATCTAGCTTTTGAT+TGG - Chr5:18055888-18055907 MsG0580025400.01.T01:CDS 30.0%
!!! TTTTTTCTTTCATAGTGGCA+TGG - Chr5:18056168-18056187 MsG0580025400.01.T01:intron 30.0%
!!! TTTTTTTGTTCGTGGATAAC+TGG - Chr5:18056299-18056318 MsG0580025400.01.T01:CDS 30.0%
AAAGTGACAATGACAATGAG+TGG + Chr5:18058753-18058772 None:intergenic 35.0%
AAGTTGACAACCGTAAAAAG+AGG + Chr5:18057996-18058015 None:intergenic 35.0%
AGTTCATCTTAGTAGCTTCA+TGG + Chr5:18059249-18059268 None:intergenic 35.0%
ATATAGGAGTCCAAGCTTTA+TGG - Chr5:18059310-18059329 MsG0580025400.01.T01:CDS 35.0%
ATCCTGGATGAAAAAAAGGA+AGG + Chr5:18057036-18057055 None:intergenic 35.0%
ATGAACACAGAATCAAAGGT+AGG + Chr5:18057966-18057985 None:intergenic 35.0%
CAAATCACTGCACTAAAATC+TGG - Chr5:18056864-18056883 MsG0580025400.01.T01:intron 35.0%
CAAGGACCTAGAACAAAAAA+TGG + Chr5:18057432-18057451 None:intergenic 35.0%
CATGCAAATAGTTGAGGTAT+TGG - Chr5:18057874-18057893 MsG0580025400.01.T01:intron 35.0%
CCAAATTTCAAAAGATCGTC+TGG + Chr5:18059158-18059177 None:intergenic 35.0%
CCACAAAAGATACTTCTTGT+AGG + Chr5:18057115-18057134 None:intergenic 35.0%
CGTAGGAATGAAAATTGGAA+AGG - Chr5:18056115-18056134 MsG0580025400.01.T01:intron 35.0%
CTATAACTTCAAAAGGGAGA+AGG + Chr5:18058599-18058618 None:intergenic 35.0%
CTCAGAAGAAATTAGAAGGA+AGG + Chr5:18057581-18057600 None:intergenic 35.0%
CTCTGATGAAGACTAAATAC+TGG - Chr5:18059392-18059411 MsG0580025400.01.T01:CDS 35.0%
CTGAATGAACACAGAATCAA+AGG + Chr5:18057970-18057989 None:intergenic 35.0%
GAAAATTGGAAAGGGGAAAA+TGG - Chr5:18056124-18056143 MsG0580025400.01.T01:intron 35.0%
GACTGTCTTAAATTTCCAAC+TGG - Chr5:18056642-18056661 MsG0580025400.01.T01:CDS 35.0%
GCCAAAAACTATGTATGAAC+TGG - Chr5:18058405-18058424 MsG0580025400.01.T01:intron 35.0%
GGTTATAACATTCCATTGGA+GGG + Chr5:18056480-18056499 None:intergenic 35.0%
TAAATAATGTCTTCAGGGGT+TGG - Chr5:18058242-18058261 MsG0580025400.01.T01:intron 35.0%
TACAAGTTACGGTTACATTC+TGG - Chr5:18056941-18056960 MsG0580025400.01.T01:CDS 35.0%
TCAAATAACCCAATCCAACT+AGG - Chr5:18055051-18055070 MsG0580025400.01.T01:intron 35.0%
TCACTTAGCTCAGGAATTTA+TGG - Chr5:18057723-18057742 MsG0580025400.01.T01:intron 35.0%
TCCATTCATTCATATGAGAG+AGG + Chr5:18059074-18059093 None:intergenic 35.0%
TCCTCTCTCATATGAATGAA+TGG - Chr5:18059070-18059089 MsG0580025400.01.T01:intron 35.0%
TGAGAACAGCTTATGAACAT+GGG + Chr5:18055077-18055096 None:intergenic 35.0%
TGATGTCATGCAAATAGTTG+AGG - Chr5:18057868-18057887 MsG0580025400.01.T01:intron 35.0%
TGCTTCGTAGGAATGAAAAT+TGG - Chr5:18056110-18056129 MsG0580025400.01.T01:intron 35.0%
TGGAGAAAATGCTTCAACAA+GGG - Chr5:18058096-18058115 MsG0580025400.01.T01:intron 35.0%
TGGCACACATGTTAAGAAAA+AGG - Chr5:18059175-18059194 MsG0580025400.01.T01:CDS 35.0%
TGGTTATAACATTCCATTGG+AGG + Chr5:18056481-18056500 None:intergenic 35.0%
TGTGAAAAAAATGCCCTGTT+TGG - Chr5:18054817-18054836 MsG0580025400.01.T01:CDS 35.0%
TTCATCCAGGATATTGTCAT+TGG - Chr5:18057044-18057063 MsG0580025400.01.T01:intron 35.0%
TTCTTTCCAGTCACTACAAT+CGG + Chr5:18054434-18054453 None:intergenic 35.0%
TTGATCACTACTTCAACATC+TGG + Chr5:18058850-18058869 None:intergenic 35.0%
! AAATATTTCAGGGACTTGCT+GGG - Chr5:18059093-18059112 MsG0580025400.01.T01:intron 35.0%
! AATGTGCTTGAGTGTTGTAA+GGG - Chr5:18054512-18054531 MsG0580025400.01.T01:intron 35.0%
! AGTCTGTCCATTGTTTGTTA+AGG + Chr5:18058676-18058695 None:intergenic 35.0%
! AGTGATTTGTGGTTGTTTGT+TGG + Chr5:18056853-18056872 None:intergenic 35.0%
! AGTTCTTCCTTTCCTTTTGT+TGG - Chr5:18056902-18056921 MsG0580025400.01.T01:CDS 35.0%
! ATCAGCAATAACTTGTAACC+AGG + Chr5:18058194-18058213 None:intergenic 35.0%
! ATCGTTTTCGTGCTTTCTTT+TGG + Chr5:18054297-18054316 None:intergenic 35.0%
! ATTGTTTGTTAAGGACCAAG+GGG + Chr5:18058667-18058686 None:intergenic 35.0%
! ATTTTCAACAGCTCGTCAAA+TGG - Chr5:18057666-18057685 MsG0580025400.01.T01:intron 35.0%
! CATTCAGTTGCCTCTTTTTA+CGG - Chr5:18057983-18058002 MsG0580025400.01.T01:intron 35.0%
! CATTGTTTGTTAAGGACCAA+GGG + Chr5:18058668-18058687 None:intergenic 35.0%
! CTTCTTCGAAGATTTGAGTT+CGG + Chr5:18054240-18054259 None:intergenic 35.0%
! GAATCAGTTTGTTTGTATGG+TGG - Chr5:18056825-18056844 MsG0580025400.01.T01:intron 35.0%
! GATACATACTTTTACAGGGT+TGG + Chr5:18057752-18057771 None:intergenic 35.0%
! GTGGAATCAGTTTGTTTGTA+TGG - Chr5:18056822-18056841 MsG0580025400.01.T01:intron 35.0%
! TATAGGAGTCCAAGCTTTAT+GGG - Chr5:18059311-18059330 MsG0580025400.01.T01:CDS 35.0%
! TCGTTTTCGTGCTTTCTTTT+GGG + Chr5:18054296-18054315 None:intergenic 35.0%
! TTGTTGTTAAGGGTTTGTTC+TGG + Chr5:18054215-18054234 None:intergenic 35.0%
!! ATTTTATTTGGTTGGCTCAC+TGG - Chr5:18057198-18057217 MsG0580025400.01.T01:intron 35.0%
!! GACTTTTGACTCTCCTATTT+AGG + Chr5:18054063-18054082 None:intergenic 35.0%
!! GATTTTAGTGCAGTGATTTG+TGG + Chr5:18056864-18056883 None:intergenic 35.0%
!! GCTTTTGATTGGGAAGAAAA+TGG - Chr5:18055899-18055918 MsG0580025400.01.T01:CDS 35.0%
!! TTAATTTTGGTCTGCTTCGT+AGG - Chr5:18056098-18056117 MsG0580025400.01.T01:intron 35.0%
!! TTTTATTTGGTTGGCTCACT+GGG - Chr5:18057199-18057218 MsG0580025400.01.T01:intron 35.0%
!!! AGGCATACTTTTGAGATTTG+TGG + Chr5:18057946-18057965 None:intergenic 35.0%
!!! ATACATAGTTTTTGGCTTCC+AGG + Chr5:18058401-18058420 None:intergenic 35.0%
!!! ATCCACTTTTTTATTCCCCT+TGG - Chr5:18058649-18058668 MsG0580025400.01.T01:intron 35.0%
!!! CCAGACGATCTTTTGAAATT+TGG - Chr5:18059155-18059174 MsG0580025400.01.T01:CDS 35.0%
!!! CCTACAAGAAGTATCTTTTG+TGG - Chr5:18057112-18057131 MsG0580025400.01.T01:intron 35.0%
!!! TACATAGTTTTTGGCTTCCA+GGG + Chr5:18058400-18058419 None:intergenic 35.0%
!!! TTCCTTCCTTTTTTTCATCC+AGG - Chr5:18057031-18057050 MsG0580025400.01.T01:intron 35.0%
AAATGGATCTAGTACCCAGT+TGG + Chr5:18056660-18056679 None:intergenic 40.0%
AACAAATCGGAGGAAAGCAA+TGG - Chr5:18054377-18054396 MsG0580025400.01.T01:exon 40.0%
AACATCCTCTCTATTGGGTT+GGG + Chr5:18056588-18056607 None:intergenic 40.0%
AACCAGATCTTGAATACGAC+CGG + Chr5:18057075-18057094 None:intergenic 40.0%
AACTTGGACAATCCAAAGTG+TGG - Chr5:18055487-18055506 MsG0580025400.01.T01:CDS 40.0%
AACTTGTGACAGGTTGTTGT+AGG - Chr5:18057821-18057840 MsG0580025400.01.T01:intron 40.0%
ACGCTAGTGTTGCAATATAC+TGG - Chr5:18057245-18057264 MsG0580025400.01.T01:intron 40.0%
AGGGATCCTGATATTATGAG+TGG - Chr5:18055991-18056010 MsG0580025400.01.T01:intron 40.0%
ATACTTGGTCAGACATGTTC+TGG - Chr5:18057502-18057521 MsG0580025400.01.T01:intron 40.0%
ATGAATAAGCGGAAGAGCAA+GGG - Chr5:18055582-18055601 MsG0580025400.01.T01:intron 40.0%
ATGTCTGACCAAGTATAGAG+CGG + Chr5:18057498-18057517 None:intergenic 40.0%
CAAATAGTCCGCTCTATACT+TGG - Chr5:18057487-18057506 MsG0580025400.01.T01:intron 40.0%
CCTTGGTCCTTAACAAACAA+TGG - Chr5:18058666-18058685 MsG0580025400.01.T01:intron 40.0%
CTGAGAACAGCTTATGAACA+TGG + Chr5:18055078-18055097 None:intergenic 40.0%
GAAATATTTCAGGGACTTGC+TGG - Chr5:18059092-18059111 MsG0580025400.01.T01:intron 40.0%
GACCAAGGGGAATAAAAAAG+TGG + Chr5:18058654-18058673 None:intergenic 40.0%
GAGTTCCAATGACAATATCC+TGG + Chr5:18057052-18057071 None:intergenic 40.0%
GATATTGTCATTGGAACTCC+CGG - Chr5:18057053-18057072 MsG0580025400.01.T01:intron 40.0%
GATTGGGAAGAAAATGGCAA+GGG - Chr5:18055905-18055924 MsG0580025400.01.T01:CDS 40.0%
GCTAAGTGATGAACTGCTAA+CGG + Chr5:18057712-18057731 None:intergenic 40.0%
GGCCAAGTTCATAGAAGTAA+AGG + Chr5:18055832-18055851 None:intergenic 40.0%
GGGATCCTGATATTATGAGT+GGG - Chr5:18055992-18056011 MsG0580025400.01.T01:intron 40.0%
GTGGAGAAAATGCTTCAACA+AGG - Chr5:18058095-18058114 MsG0580025400.01.T01:intron 40.0%
TAACATCCTCTCTATTGGGT+TGG + Chr5:18056589-18056608 None:intergenic 40.0%
TAAGCACTTGTGAGACTGTT+TGG - Chr5:18054787-18054806 MsG0580025400.01.T01:intron 40.0%
TAGCCTTCCCTTGATACAAA+AGG - Chr5:18056348-18056367 MsG0580025400.01.T01:intron 40.0%
TATGAATAAGCGGAAGAGCA+AGG - Chr5:18055581-18055600 MsG0580025400.01.T01:intron 40.0%
TCACGACCATCCAACAAAAA+CGG + Chr5:18054575-18054594 None:intergenic 40.0%
TCAGATGTATTGTGTGATGC+TGG - Chr5:18056786-18056805 MsG0580025400.01.T01:intron 40.0%
TCGTGATTTGATTGGGATTG+CGG - Chr5:18054589-18054608 MsG0580025400.01.T01:CDS 40.0%
TGATTGGGAAACAAACGACA+CGG - Chr5:18055948-18055967 MsG0580025400.01.T01:intron 40.0%
TGATTGGGAAGAAAATGGCA+AGG - Chr5:18055904-18055923 MsG0580025400.01.T01:CDS 40.0%
TGGAAAGCAGTGTCTATAAG+TGG - Chr5:18058262-18058281 MsG0580025400.01.T01:intron 40.0%
TGGACAGACTAGTGACTATT+AGG - Chr5:18058686-18058705 MsG0580025400.01.T01:intron 40.0%
TGGATGGTCGTGATTTGATT+GGG - Chr5:18054582-18054601 MsG0580025400.01.T01:CDS 40.0%
TGGTTATGTTCAGTGCTACA+TGG - Chr5:18057686-18057705 MsG0580025400.01.T01:intron 40.0%
TGTACAAATGGGAAACCACA+CGG - Chr5:18058072-18058091 MsG0580025400.01.T01:intron 40.0%
TGTGATGCTGGTAAATCTTG+TGG - Chr5:18056798-18056817 MsG0580025400.01.T01:intron 40.0%
TTCATCTCCATTTCCAACCA+TGG - Chr5:18054157-18054176 MsG0580025400.01.T01:three_prime_UTR 40.0%
TTGGATGGTCGTGATTTGAT+TGG - Chr5:18054581-18054600 MsG0580025400.01.T01:CDS 40.0%
! ATAGGAGTCCAAGCTTTATG+GGG - Chr5:18059312-18059331 MsG0580025400.01.T01:CDS 40.0%
! ATGAACTTGGCCTTTCTCTT+TGG - Chr5:18055840-18055859 MsG0580025400.01.T01:CDS 40.0%
! CAACCTTTTGTATCAAGGGA+AGG + Chr5:18056354-18056373 None:intergenic 40.0%
! CCATTGTTTGTTAAGGACCA+AGG + Chr5:18058669-18058688 None:intergenic 40.0%
! GAAAAAGCACAACAAATCGG+AGG - Chr5:18054367-18054386 MsG0580025400.01.T01:three_prime_UTR 40.0%
! GAATGTGCTTGAGTGTTGTA+AGG - Chr5:18054511-18054530 MsG0580025400.01.T01:intron 40.0%
! GTTAAGGGTTTGTTCTGGTT+CGG + Chr5:18054210-18054229 None:intergenic 40.0%
!! AATATTTCAGGGACTTGCTG+GGG - Chr5:18059094-18059113 MsG0580025400.01.T01:intron 40.0%
!! ACCATGTATCGGCTTGTAAT+TGG - Chr5:18059558-18059577 MsG0580025400.01.T01:CDS 40.0%
!! ATATACCTGGTGAAAGTACC+TGG - Chr5:18058173-18058192 MsG0580025400.01.T01:CDS 40.0%
!! CCATGTATCGGCTTGTAATT+GGG - Chr5:18059559-18059578 MsG0580025400.01.T01:CDS 40.0%
!! GAGTTCGGTGTTGTTGTTAA+GGG + Chr5:18054225-18054244 None:intergenic 40.0%
!! TGAGTTCGGTGTTGTTGTTA+AGG + Chr5:18054226-18054245 None:intergenic 40.0%
!! TTAGACTTTGGAGCATCAAC+AGG + Chr5:18059355-18059374 None:intergenic 40.0%
!!! GTTTTAGGGTCTGTTTGACT+TGG - Chr5:18054740-18054759 MsG0580025400.01.T01:intron 40.0%
!!! TTCAGCGTCGTTTTGAAGAT+TGG + Chr5:18054324-18054343 None:intergenic 40.0%
AAATCGGAGGAAAGCAATGG+TGG - Chr5:18054380-18054399 MsG0580025400.01.T01:exon 45.0%
AACATGGGCCTAGTTGGATT+GGG + Chr5:18055062-18055081 None:intergenic 45.0%
AAGAGCAAGGGTTCTTCCAA+GGG - Chr5:18055594-18055613 MsG0580025400.01.T01:intron 45.0%
ACCAGATCTTGAATACGACC+GGG + Chr5:18057074-18057093 None:intergenic 45.0%
AGCAGTTCATCACTTAGCTC+AGG - Chr5:18057714-18057733 MsG0580025400.01.T01:intron 45.0%
AGGTCCTTGATGAAGCAGAT+CGG - Chr5:18057443-18057462 MsG0580025400.01.T01:intron 45.0%
AGTTATACCTCTCCCTCCAA+TGG - Chr5:18056465-18056484 MsG0580025400.01.T01:intron 45.0%
CAACACTCAAGCACATTCTC+AGG + Chr5:18054509-18054528 None:intergenic 45.0%
CCCAATTACAAGCCGATACA+TGG + Chr5:18059562-18059581 None:intergenic 45.0%
CTGCAATACTTTGGCCATGT+TGG - Chr5:18058465-18058484 MsG0580025400.01.T01:intron 45.0%
CTTATGAACATGGGCCTAGT+TGG + Chr5:18055068-18055087 None:intergenic 45.0%
GAAAATGGCAAGGGAATGAG+TGG - Chr5:18055914-18055933 MsG0580025400.01.T01:CDS 45.0%
GAATGGAAGCTGTCCTTTGA+TGG - Chr5:18058330-18058349 MsG0580025400.01.T01:intron 45.0%
GATGAACCGATTGTAGTGAC+TGG - Chr5:18054425-18054444 MsG0580025400.01.T01:CDS 45.0%
GATTGGGAAACAAACGACAC+GGG - Chr5:18055949-18055968 MsG0580025400.01.T01:intron 45.0%
GGTGAAGAGGTTTGAGGATT+CGG - Chr5:18054478-18054497 MsG0580025400.01.T01:intron 45.0%
GTACAAATGGGAAACCACAC+GGG - Chr5:18058073-18058092 MsG0580025400.01.T01:intron 45.0%
GTAGTGACTGGAAAGAATGC+CGG - Chr5:18054437-18054456 MsG0580025400.01.T01:CDS 45.0%
GTGAAGAGGTTTGAGGATTC+GGG - Chr5:18054479-18054498 MsG0580025400.01.T01:intron 45.0%
TAACATTCCATTGGAGGGAG+AGG + Chr5:18056475-18056494 None:intergenic 45.0%
TGAAGAGGTTTGAGGATTCG+GGG - Chr5:18054480-18054499 MsG0580025400.01.T01:intron 45.0%
TGCCGGAGATGAGAAATACA+CGG - Chr5:18054454-18054473 MsG0580025400.01.T01:intron 45.0%
TGCTGGTAAATCTTGTGGTG+TGG - Chr5:18056803-18056822 MsG0580025400.01.T01:intron 45.0%
TGTAACCAGGTACTTTCACC+AGG + Chr5:18058181-18058200 None:intergenic 45.0%
! AAGCAATGGTGGTGATGTGT+CGG - Chr5:18054391-18054410 MsG0580025400.01.T01:exon 45.0%
! CTAGGGAAGACACTTGCTTT+TGG - Chr5:18055537-18055556 MsG0580025400.01.T01:intron 45.0%
!! ATCATATCAGTTTGCTGCCC+TGG - Chr5:18058380-18058399 MsG0580025400.01.T01:intron 45.0%
!! TTCTGGTTCGGTGGCTAAAA+CGG + Chr5:18054198-18054217 None:intergenic 45.0%
!!! GTGAACGTTTTGAGAGAAGC+AGG - Chr5:18059122-18059141 MsG0580025400.01.T01:intron 45.0%
!! ATAAAACTAATAAATAAAAT+AGG + Chr5:18055731-18055750 None:intergenic 5.0%
!! TTATTATATTATCAAAAAAA+AGG + Chr5:18058152-18058171 None:intergenic 5.0%
!!! AATATTAATATTTAGTTTTA+GGG - Chr5:18054726-18054745 MsG0580025400.01.T01:intron 5.0%
!!! TAATATTAATATTTAGTTTT+AGG - Chr5:18054725-18054744 MsG0580025400.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTAAACAAA+GGG - Chr5:18056075-18056094 MsG0580025400.01.T01:CDS 5.0%
!!! TTTTTTTTTTTTTTAAACAA+AGG - Chr5:18056074-18056093 MsG0580025400.01.T01:CDS 5.0%
ACAGGTTGTTGTAGGCTCAG+AGG - Chr5:18057829-18057848 MsG0580025400.01.T01:intron 50.0%
ACTCTCCCAACCCAATAGAG+AGG - Chr5:18056580-18056599 MsG0580025400.01.T01:intron 50.0%
ACTGGACGAGCTGGTAAGAA+AGG - Chr5:18058919-18058938 MsG0580025400.01.T01:intron 50.0%
AGAAATACACGGCGGTGAAG+AGG - Chr5:18054465-18054484 MsG0580025400.01.T01:intron 50.0%
AGCAGATCGGATGCTTGACA+TGG - Chr5:18057456-18057475 MsG0580025400.01.T01:intron 50.0%
ATCACAGCATGAGCGCACAA+AGG - Chr5:18058291-18058310 MsG0580025400.01.T01:intron 50.0%
CAAACGACACGGGAATGAGT+TGG - Chr5:18055959-18055978 MsG0580025400.01.T01:intron 50.0%
CATGTGGCAACTGTCTATCC+AGG + Chr5:18057318-18057337 None:intergenic 50.0%
CCTTATGCTCTCTCCTACGA+GGG - Chr5:18055632-18055651 MsG0580025400.01.T01:intron 50.0%
CGCCGTGTATTTCTCATCTC+CGG + Chr5:18054459-18054478 None:intergenic 50.0%
CGGAGATGAGAAATACACGG+CGG - Chr5:18054457-18054476 MsG0580025400.01.T01:intron 50.0%
CTCCGATTCAATCACGTGCT+TGG - Chr5:18054549-18054568 MsG0580025400.01.T01:intron 50.0%
CTCTACACTGAGGCCCTATT+TGG + Chr5:18055250-18055269 None:intergenic 50.0%
GAACATGGGCCTAGTTGGAT+TGG + Chr5:18055063-18055082 None:intergenic 50.0%
GAAGAGCAAGGGTTCTTCCA+AGG - Chr5:18055593-18055612 MsG0580025400.01.T01:intron 50.0%
GAAGTGAGCCCCATAAAGCT+TGG + Chr5:18059323-18059342 None:intergenic 50.0%
GCACGTGATTGAATCGGAGA+AGG + Chr5:18054548-18054567 None:intergenic 50.0%
GCAGATCGGATGCTTGACAT+GGG - Chr5:18057457-18057476 MsG0580025400.01.T01:intron 50.0%
GCATCCGATCTGCTTCATCA+AGG + Chr5:18057450-18057469 None:intergenic 50.0%
GCTTTATGGGGCTCACTTCA+AGG - Chr5:18059324-18059343 MsG0580025400.01.T01:CDS 50.0%
GGCCAAGCACGTGATTGAAT+CGG + Chr5:18054554-18054573 None:intergenic 50.0%
GTTCATAGAATTGGGCGGAC+TGG - Chr5:18058901-18058920 MsG0580025400.01.T01:intron 50.0%
TCCCGGTCGTATTCAAGATC+TGG - Chr5:18057070-18057089 MsG0580025400.01.T01:intron 50.0%
TGATTGGGATTGCGGCAACT+GGG - Chr5:18054597-18054616 MsG0580025400.01.T01:CDS 50.0%
TGGGCAGATTGCTACTGATG+TGG - Chr5:18058804-18058823 MsG0580025400.01.T01:intron 50.0%
TTGATTGGGATTGCGGCAAC+TGG - Chr5:18054596-18054615 MsG0580025400.01.T01:CDS 50.0%
TTGCGAGCCATGGTTGGAAA+TGG + Chr5:18054167-18054186 None:intergenic 50.0%
! AAGCATTTTCTCCACCCGTG+TGG + Chr5:18058090-18058109 None:intergenic 50.0%
! GGAGAGAGCATAAGGCAAAG+AGG + Chr5:18055627-18055646 None:intergenic 50.0%
!! AAGGGTTTGTTCTGGTTCGG+TGG + Chr5:18054207-18054226 None:intergenic 50.0%
!! TCGTTTTTGCGAGCCATGGT+TGG + Chr5:18054173-18054192 None:intergenic 50.0%
!! TGGTGGTGATGTGTCGGTTT+CGG - Chr5:18054397-18054416 MsG0580025400.01.T01:CDS 50.0%
!!! ACGTGCTTGGCCGTTTTTGT+TGG - Chr5:18054562-18054581 MsG0580025400.01.T01:intron 50.0%
!!! GCTTGGCCGTTTTTGTTGGA+TGG - Chr5:18054566-18054585 MsG0580025400.01.T01:intron 50.0%
AGTGAAGCAGCTCGAAGCAG+AGG + Chr5:18054137-18054156 None:intergenic 55.0%
CAAATGGGAAACCACACGGG+TGG - Chr5:18058076-18058095 MsG0580025400.01.T01:intron 55.0%
CTCGAAGCAGAGGCGAAAAG+TGG + Chr5:18054127-18054146 None:intergenic 55.0%
GAGGCGAAAAGTGGAAGAGG+TGG + Chr5:18054118-18054137 None:intergenic 55.0%
GCAAAGAGGATTCCGACCCT+TGG + Chr5:18055613-18055632 None:intergenic 55.0%
GCAAGGGTTCTTCCAAGGGT+CGG - Chr5:18055598-18055617 MsG0580025400.01.T01:intron 55.0%
GCAGAGGCGAAAAGTGGAAG+AGG + Chr5:18054121-18054140 None:intergenic 55.0%
GCCTTATGCTCTCTCCTACG+AGG - Chr5:18055631-18055650 MsG0580025400.01.T01:intron 55.0%
TGATGTGGCTGCACGAGGAT+TGG - Chr5:18058819-18058838 MsG0580025400.01.T01:intron 55.0%
TGTTGAGCTAGCTCCCTCGT+AGG + Chr5:18055648-18055667 None:intergenic 55.0%
! CCCTCGTAGGAGAGAGCATA+AGG + Chr5:18055635-18055654 None:intergenic 55.0%
!! TGATGTGTCGGTTTCGGCGT+CGG - Chr5:18054403-18054422 MsG0580025400.01.T01:CDS 55.0%
CACGGCGGTGAAGAGGTTTG+AGG - Chr5:18054472-18054491 MsG0580025400.01.T01:intron 60.0%
GCTACTGATGTGGCTGCACG+AGG - Chr5:18058814-18058833 MsG0580025400.01.T01:intron 60.0%
!!! GGCGTCGTTTTTGCGAGCCA+TGG + Chr5:18054177-18054196 None:intergenic 60.0%
GGGATTGCGGCAACTGGGTC+AGG - Chr5:18054602-18054621 MsG0580025400.01.T01:CDS 65.0%
!! ATTGGGCGGACTGGACGAGC+TGG - Chr5:18058910-18058929 MsG0580025400.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 18054058 18059715 18054058 ID=MsG0580025400.01;Name=MsG0580025400.01
Chr5 mRNA 18054058 18059715 18054058 ID=MsG0580025400.01.T01;Parent=MsG0580025400.01;Name=MsG0580025400.01.T01;_AED=0.33;_eAED=0.33;_QI=118|1|1|1|1|1|12|334|513
Chr5 exon 18054058 18054457 18054058 ID=MsG0580025400.01.T01:exon:19081;Parent=MsG0580025400.01.T01
Chr5 exon 18054577 18054669 18054577 ID=MsG0580025400.01.T01:exon:19080;Parent=MsG0580025400.01.T01
Chr5 exon 18054798 18054962 18054798 ID=MsG0580025400.01.T01:exon:19079;Parent=MsG0580025400.01.T01
Chr5 exon 18055422 18055515 18055422 ID=MsG0580025400.01.T01:exon:19078;Parent=MsG0580025400.01.T01
Chr5 exon 18055656 18055724 18055656 ID=MsG0580025400.01.T01:exon:19077;Parent=MsG0580025400.01.T01
Chr5 exon 18055816 18055940 18055816 ID=MsG0580025400.01.T01:exon:19076;Parent=MsG0580025400.01.T01
Chr5 exon 18056011 18056096 18056011 ID=MsG0580025400.01.T01:exon:19075;Parent=MsG0580025400.01.T01
Chr5 exon 18056250 18056328 18056250 ID=MsG0580025400.01.T01:exon:19074;Parent=MsG0580025400.01.T01
Chr5 exon 18056640 18056720 18056640 ID=MsG0580025400.01.T01:exon:19073;Parent=MsG0580025400.01.T01
Chr5 exon 18056883 18056990 18056883 ID=MsG0580025400.01.T01:exon:19072;Parent=MsG0580025400.01.T01
Chr5 exon 18058105 18058232 18058105 ID=MsG0580025400.01.T01:exon:19071;Parent=MsG0580025400.01.T01
Chr5 exon 18059150 18059715 18059150 ID=MsG0580025400.01.T01:exon:19070;Parent=MsG0580025400.01.T01
Chr5 five_prime_UTR 18059598 18059715 18059598 ID=MsG0580025400.01.T01:five_prime_utr;Parent=MsG0580025400.01.T01
Chr5 CDS 18059150 18059597 18059150 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18058105 18058232 18058105 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18056883 18056990 18056883 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18056640 18056720 18056640 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18056250 18056328 18056250 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18056011 18056096 18056011 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18055816 18055940 18055816 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18055656 18055724 18055656 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18055422 18055515 18055422 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18054798 18054962 18054798 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18054577 18054669 18054577 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 CDS 18054392 18054457 18054392 ID=MsG0580025400.01.T01:cds;Parent=MsG0580025400.01.T01
Chr5 three_prime_UTR 18054058 18054391 18054058 ID=MsG0580025400.01.T01:three_prime_utr;Parent=MsG0580025400.01.T01
Gene Sequence

>MsG0580025400.01.T01

ATGGCTCGCAAAAACGACGCCGTTTTAGCCACCGAACCAGAACAAACCCTTAACAACAACACCGAACTCAAATCTTCGAAGAAGAAGAACAAAAAGAACAAACACGAAGAAAACACTCCCAAAAGAAAGCACGAAAACGATGAAACCAATCTTCAAAACGACGCTGAATCAGAGAAGAAAAGTAAGAAGAAGAAAAAGCACAACAAATCGGAGGAAAGCAATGGTGGTGATGTGTCGGTTTCGGCGTCGGATGAACCGATTGTAGTGACTGGAAAGAATGCCGGAGATGAGAAATACACGGCGGTGAAGAGGTTTGAGGATTCGGGGCTACCTGAGAATGTGCTTGAGTGTTGTAAGGGTTTTGAGAAACCTTCTCCGATTCAATCACGTGCTTGGCCGTTTTTGTTGGATGGTCGTGATTTGATTGGGATTGCGGCAACTGGGTCAGGGAAGACACTTGCTTTTGGAATACCAGCTATTATGCATGTTATGAATAAGCGGAAGAGCAAGGGTTCTTCCAAGGGTCGGAATCCTCTTTGCCTTATGCTCTCTCCTACGAGGGAGCTAGCTCAACAAATATCAGATGTATTGTGTGATGCTGGTAAATCTTGTGGTGTGGAATCAGTTTGTTTGTATGGTGGAACCAACAAACAACCACAAATCACTGCACTAAAATCTGGCATTGATATTGTCATTGGAACTCCCGGTCGTATTCAAGATCTGGTTGAAATGGGTTTCTGTCGCCTACAAGAAGTATCTTTTGTGGTCCTTGATGAAGCAGATCGGATGCTTGACATGGGTTTTGAACAAATAGTCCGCTCTATACTTGGTCAGACATGTTCTGCTCGTCAAATGGTTATGTTCAGTGCTACATGGCCGTTAGCAGTTCATCACTTAGCTCAGGAATTTATGGATCCCAACCCTGTAAAAGTTGTTGTAGGCTCAGAGGATTTATCTGCCAATCATGATGTCATGCAAATAGTTGAGGTATTGGATGAGCGTTTACGTGATAAGCGCCTGCTTGCTTTACTAGAAAAATACCACAAATCTCAAAAGAATCGAGTATTGGTTTTTGTTTTGTACAAATGGGAAACCACACGGGTGGAGAAAATGCTTCAACAAGGGGGTTGGAAAGCAGTGTCTATAAGTGGTGACAAATCACAGCATGAGCGCACAAAGGCACTATCATTATTCAAGAATGGAAGCTGTCCTTTGATGATTGCTACTGATGTGGCTGCACGAGGATTGGATATTCCAGATGTTGAAGTAGTGATCAACTTTAGTTTTCCTCTAACTCTAGAAGATTATGTTCATAGAATTGGGCGGACTGGACGAGCTGGTAAGAAAGGTGTTGCCCATACATTCTTCACACATTTGAATAAGGGACTTGCTGGGGAGCTTGTGAACGTTTTGAGAGAAGCAGGACAAGTTGTGCCAGACGATCTTTTGAAATTTGGCACACATGTTAAGAAAAAGGAGTCCAAGCTTTATGGGGCTCACTTCAAGGAAATTCCTGTTGATGCTCCAAAGTCTAAAAAATAA

Protein sequence

>MsG0580025400.01.T01

MARKNDAVLATEPEQTLNNNTELKSSKKKNKKNKHEENTPKRKHENDETNLQNDAESEKKSKKKKKHNKSEESNGGDVSVSASDEPIVVTGKNAGDEKYTAVKRFEDSGLPENVLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAIMHVMNKRKSKGSSKGRNPLCLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTNKQPQITALKSGIDIVIGTPGRIQDLVEMGFCRLQEVSFVVLDEADRMLDMGFEQIVRSILGQTCSARQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDLSANHDVMQIVEVLDERLRDKRLLALLEKYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLFKNGSCPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFTHLNKGLAGELVNVLREAGQVVPDDLLKFGTHVKKKESKLYGAHFKEIPVDAPKSKK*