Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000023.01.T01 | XP_013466199.1 | 88.043 | 92 | 3 | 2 | 1 | 84 | 68 | 159 | 5.90E-42 | 144 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000023.01.T01 | I3S747 | 88.043 | 92 | 3 | 2 | 1 | 84 | 68 | 159 | 2.82e-42 | 144 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047814.01 | MsG0180000023.01 | 0.837168 | 6.093565e-57 | 7.849885e-54 |
MsG0080047912.01 | MsG0180000023.01 | 0.801550 | 8.538833e-49 | 4.089332e-46 |
MsG0080048197.01 | MsG0180000023.01 | 0.823862 | 1.102093e-53 | 9.604393e-51 |
MsG0080048383.01 | MsG0180000023.01 | 0.843548 | 1.309262e-58 | 2.055571e-55 |
MsG0080048687.01 | MsG0180000023.01 | 0.856879 | 2.386540e-62 | 5.779655e-59 |
MsG0080048843.01 | MsG0180000023.01 | 0.827161 | 1.822703e-54 | 1.745498e-51 |
MsG0080048968.01 | MsG0180000023.01 | 0.822200 | 2.690185e-53 | 2.236412e-50 |
MsG0180000001.01 | MsG0180000023.01 | 0.832524 | 8.998961e-56 | 1.008383e-52 |
MsG0180000023.01 | MsG0180000055.01 | 0.803436 | 3.489650e-49 | 1.753532e-46 |
MsG0180000023.01 | MsG0180000611.01 | 0.824566 | 7.529735e-54 | 6.694725e-51 |
MsG0180000023.01 | MsG0180000806.01 | 0.800675 | 1.289296e-48 | 6.039640e-46 |
MsG0180000023.01 | MsG0180000824.01 | 0.813292 | 2.755146e-51 | 1.792091e-48 |
MsG0180000023.01 | MsG0180001009.01 | 0.826742 | 2.295340e-54 | 2.171300e-51 |
MsG0180000023.01 | MsG0180001237.01 | 0.828950 | 6.761348e-55 | 6.821012e-52 |
MsG0180000023.01 | MsG0180001599.01 | 0.811395 | 7.151488e-51 | 4.421925e-48 |
MsG0180000023.01 | MsG0180002283.01 | 0.819936 | 8.939340e-53 | 6.975604e-50 |
MsG0180000023.01 | MsG0180002489.01 | 0.841690 | 4.078564e-58 | 6.039494e-55 |
MsG0180000023.01 | MsG0180002491.01 | 0.822805 | 1.946530e-53 | 1.646307e-50 |
MsG0180000023.01 | MsG0180003174.01 | 0.806090 | 9.739239e-50 | 5.239503e-47 |
MsG0180000023.01 | MsG0180003586.01 | 0.800486 | 1.408813e-48 | 6.567850e-46 |
MsG0180000023.01 | MsG0180003793.01 | 0.852427 | 4.650138e-61 | 9.712885e-58 |
MsG0180000023.01 | MsG0180003822.01 | 0.817708 | 2.866229e-52 | 2.102880e-49 |
MsG0180000023.01 | MsG0180003860.01 | 0.806556 | 7.767931e-50 | 4.228996e-47 |
MsG0180000023.01 | MsG0180004009.01 | 0.815287 | 9.989669e-52 | 6.858908e-49 |
MsG0180000023.01 | MsG0180004016.01 | 0.831914 | 1.274246e-55 | 1.402574e-52 |
MsG0180000023.01 | MsG0180004128.01 | 0.817835 | 2.683747e-52 | 1.975874e-49 |
MsG0180000023.01 | MsG0180004160.01 | 0.823924 | 1.065944e-53 | 9.305235e-51 |
MsG0180000023.01 | MsG0180004767.01 | 0.847403 | 1.181964e-59 | 2.098553e-56 |
MsG0180000023.01 | MsG0180004854.01 | 0.814950 | 1.186494e-51 | 8.071674e-49 |
MsG0180000023.01 | MsG0180004991.01 | 0.839070 | 1.974445e-57 | 2.695963e-54 |
MsG0180000023.01 | MsG0180005049.01 | 0.818223 | 2.193247e-52 | 1.631921e-49 |
MsG0180000023.01 | MsG0180005233.01 | 0.806067 | 9.849747e-50 | 5.295849e-47 |
MsG0180000023.01 | MsG0180005765.01 | 0.802815 | 4.689393e-49 | 2.319419e-46 |
MsG0180000023.01 | MsG0180006013.01 | 0.848552 | 5.700023e-60 | 1.049900e-56 |
MsG0180000023.01 | MsG0280006376.01 | 0.808417 | 3.129138e-50 | 1.788210e-47 |
MsG0180000023.01 | MsG0280006406.01 | 0.814784 | 1.291398e-51 | 8.746271e-49 |
MsG0180000023.01 | MsG0280006682.01 | 0.810560 | 1.084974e-50 | 6.561240e-48 |
MsG0180000023.01 | MsG0280007161.01 | 0.846467 | 2.132502e-59 | 3.674398e-56 |
MsG0180000023.01 | MsG0280007440.01 | 0.837510 | 4.980914e-57 | 6.484988e-54 |
MsG0180000023.01 | MsG0280007441.01 | 0.813906 | 2.019174e-51 | 1.335425e-48 |
MsG0180000023.01 | MsG0280007491.01 | 0.822089 | 2.855173e-53 | 2.365965e-50 |
MsG0180000023.01 | MsG0280007609.01 | 0.823417 | 1.400999e-53 | 1.205474e-50 |
MsG0180000023.01 | MsG0280007764.01 | 0.805472 | 1.312840e-49 | 6.951688e-47 |
MsG0180000023.01 | MsG0280007790.01 | 0.804019 | 2.640677e-49 | 1.346996e-46 |
MsG0180000023.01 | MsG0280007847.01 | 0.815679 | 8.170674e-52 | 5.670839e-49 |
MsG0180000023.01 | MsG0280008004.01 | 0.827333 | 1.657797e-54 | 1.595748e-51 |
MsG0180000023.01 | MsG0280008118.01 | 0.829747 | 4.330334e-55 | 4.472779e-52 |
MsG0180000023.01 | MsG0280008286.01 | 0.809092 | 2.244404e-50 | 1.305654e-47 |
MsG0180000023.01 | MsG0280008614.01 | 0.812426 | 4.264202e-51 | 2.710572e-48 |
MsG0180000023.01 | MsG0280008885.01 | 0.825597 | 4.297548e-54 | 3.935036e-51 |
MsG0180000023.01 | MsG0280009141.01 | 0.804806 | 1.810226e-49 | 9.423229e-47 |
MsG0180000023.01 | MsG0280009375.01 | 0.815148 | 1.072433e-51 | 7.334912e-49 |
MsG0180000023.01 | MsG0280010002.01 | 0.852102 | 5.753613e-61 | 1.189520e-57 |
MsG0180000023.01 | MsG0280010547.01 | 0.804244 | 2.371036e-49 | 1.216349e-46 |
MsG0180000023.01 | MsG0280011388.01 | 0.804125 | 2.510192e-49 | 1.283893e-46 |
MsG0180000023.01 | MsG0380011614.01 | 0.851286 | 9.800050e-61 | 1.973881e-57 |
MsG0180000023.01 | MsG0380012073.01 | 0.832109 | 1.140284e-55 | 1.262081e-52 |
MsG0180000023.01 | MsG0380013579.01 | 0.809532 | 1.806647e-50 | 1.063392e-47 |
MsG0180000023.01 | MsG0380014330.01 | 0.851159 | 1.064082e-60 | 2.134354e-57 |
MsG0180000023.01 | MsG0380014885.01 | 0.813108 | 3.024470e-51 | 1.957272e-48 |
MsG0180000023.01 | MsG0380014908.01 | 0.838743 | 2.398715e-57 | 3.242843e-54 |
MsG0180000023.01 | MsG0380015118.01 | 0.804935 | 1.701344e-49 | 8.885913e-47 |
MsG0180000023.01 | MsG0380015435.01 | 0.805755 | 1.145074e-49 | 6.108081e-47 |
MsG0180000023.01 | MsG0380015598.01 | -0.801314 | 9.546448e-49 | 4.544838e-46 |
MsG0180000023.01 | MsG0380015793.01 | -0.802390 | 5.738495e-49 | 2.807728e-46 |
MsG0180000023.01 | MsG0380015818.01 | 0.828565 | 8.377447e-55 | 8.357844e-52 |
MsG0180000023.01 | MsG0380015831.01 | 0.809250 | 2.076638e-50 | 1.213180e-47 |
MsG0180000023.01 | MsG0380016132.01 | 0.814465 | 1.519859e-51 | 1.020587e-48 |
MsG0180000023.01 | MsG0380016389.01 | 0.840317 | 9.353710e-58 | 1.327257e-54 |
MsG0180000023.01 | MsG0380016483.01 | 0.837217 | 5.921062e-57 | 7.638591e-54 |
MsG0180000023.01 | MsG0380016765.01 | 0.807067 | 6.058044e-50 | 3.341773e-47 |
MsG0180000023.01 | MsG0380016985.01 | 0.807040 | 6.138973e-50 | 3.384071e-47 |
MsG0180000023.01 | MsG0380017431.01 | 0.843477 | 1.368300e-58 | 2.143410e-55 |
MsG0180000023.01 | MsG0380017476.01 | 0.830577 | 2.716193e-55 | 2.873222e-52 |
MsG0180000023.01 | MsG0380017511.01 | 0.802139 | 6.464572e-49 | 3.142591e-46 |
MsG0180000023.01 | MsG0380017719.01 | 0.810903 | 9.143799e-51 | 5.580974e-48 |
MsG0180000023.01 | MsG0380018052.01 | 0.812100 | 5.023949e-51 | 3.165259e-48 |
MsG0180000023.01 | MsG0480018292.01 | 0.822529 | 2.256690e-53 | 1.893824e-50 |
MsG0180000023.01 | MsG0480018462.01 | 0.816183 | 6.307067e-52 | 4.438052e-49 |
MsG0180000023.01 | MsG0480018477.01 | 0.847380 | 1.199989e-59 | 2.128887e-56 |
MsG0180000023.01 | MsG0480018641.01 | 0.835736 | 1.410513e-56 | 1.740376e-53 |
MsG0180000023.01 | MsG0480019642.01 | 0.804410 | 2.189600e-49 | 1.128110e-46 |
MsG0180000023.01 | MsG0480019879.01 | 0.801011 | 1.101157e-48 | 5.202689e-46 |
MsG0180000023.01 | MsG0480020318.01 | 0.808238 | 3.415912e-50 | 1.942981e-47 |
MsG0180000023.01 | MsG0480020331.01 | 0.821422 | 4.073051e-53 | 3.312211e-50 |
MsG0180000023.01 | MsG0480020591.01 | 0.803605 | 3.218779e-49 | 1.624520e-46 |
MsG0180000023.01 | MsG0480020791.01 | 0.805839 | 1.099937e-49 | 5.879634e-47 |
MsG0180000023.01 | MsG0480020843.01 | 0.818545 | 1.854136e-52 | 1.392006e-49 |
MsG0180000023.01 | MsG0480021832.01 | 0.837629 | 4.644569e-57 | 6.069244e-54 |
MsG0180000023.01 | MsG0480022115.01 | 0.800765 | 1.236345e-48 | 5.804509e-46 |
MsG0180000023.01 | MsG0480022183.01 | 0.804309 | 2.298384e-49 | 1.181113e-46 |
MsG0180000023.01 | MsG0480022228.01 | 0.811387 | 7.183084e-51 | 4.440278e-48 |
MsG0180000023.01 | MsG0480022678.01 | 0.806553 | 7.779826e-50 | 4.235194e-47 |
MsG0180000023.01 | MsG0480022825.01 | 0.801550 | 8.539201e-49 | 4.089503e-46 |
MsG0180000023.01 | MsG0480023149.01 | 0.825698 | 4.067517e-54 | 3.735125e-51 |
MsG0180000023.01 | MsG0480023240.01 | 0.808040 | 3.764303e-50 | 2.129884e-47 |
MsG0180000023.01 | MsG0480023361.01 | 0.825560 | 4.385577e-54 | 4.011188e-51 |
MsG0180000023.01 | MsG0480023377.01 | 0.802279 | 6.048184e-49 | 2.950821e-46 |
MsG0180000023.01 | MsG0480023447.01 | 0.811453 | 6.947248e-51 | 4.302193e-48 |
MsG0180000023.01 | MsG0480023559.01 | 0.846891 | 1.633631e-59 | 2.852942e-56 |
MsG0180000023.01 | MsG0480023755.01 | 0.803220 | 3.867164e-49 | 1.932481e-46 |
MsG0180000023.01 | MsG0580024084.01 | 0.810092 | 1.368509e-50 | 8.174526e-48 |
MsG0180000023.01 | MsG0580024191.01 | 0.858521 | 7.781756e-63 | 1.991519e-59 |
MsG0180000023.01 | MsG0580024618.01 | 0.814226 | 1.715698e-51 | 1.144626e-48 |
MsG0180000023.01 | MsG0580024819.01 | 0.806407 | 8.349439e-50 | 4.528202e-47 |
MsG0180000023.01 | MsG0580025134.01 | 0.813283 | 2.768339e-51 | 1.800194e-48 |
MsG0180000023.01 | MsG0580025491.01 | -0.805117 | 1.558559e-49 | 8.177953e-47 |
MsG0180000023.01 | MsG0580025651.01 | 0.819079 | 1.401820e-52 | 1.068037e-49 |
MsG0180000023.01 | MsG0580026157.01 | 0.819846 | 9.370325e-53 | 7.293471e-50 |
MsG0180000023.01 | MsG0580027441.01 | 0.804768 | 1.843366e-49 | 9.586182e-47 |
MsG0180000023.01 | MsG0580028018.01 | 0.807060 | 6.078899e-50 | 3.352687e-47 |
MsG0180000023.01 | MsG0580028072.01 | 0.808911 | 2.454501e-50 | 1.420882e-47 |
MsG0180000023.01 | MsG0580028597.01 | 0.827392 | 1.604708e-54 | 1.547343e-51 |
MsG0180000023.01 | MsG0580029148.01 | 0.800171 | 1.633287e-48 | 7.553516e-46 |
MsG0180000023.01 | MsG0580029258.01 | 0.806553 | 7.779826e-50 | 4.235194e-47 |
MsG0180000023.01 | MsG0580029283.01 | 0.812643 | 3.823600e-51 | 2.444279e-48 |
MsG0180000023.01 | MsG0580029300.01 | 0.819438 | 1.161641e-52 | 8.938924e-50 |
MsG0180000023.01 | MsG0580029588.01 | 0.803278 | 3.762945e-49 | 1.883169e-46 |
MsG0180000023.01 | MsG0580029594.01 | 0.802561 | 5.291382e-49 | 2.600043e-46 |
MsG0180000023.01 | MsG0580029801.01 | 0.855093 | 7.947288e-62 | 1.813794e-58 |
MsG0180000023.01 | MsG0580030003.01 | 0.812822 | 3.493993e-51 | 2.243931e-48 |
MsG0180000023.01 | MsG0580030160.01 | 0.822418 | 2.394405e-53 | 2.003065e-50 |
MsG0180000023.01 | MsG0580030204.01 | 0.850572 | 1.557018e-60 | 3.063260e-57 |
MsG0180000023.01 | MsG0680031133.01 | 0.805895 | 1.070327e-49 | 5.729472e-47 |
MsG0180000023.01 | MsG0680031628.01 | 0.802220 | 6.220869e-49 | 3.030359e-46 |
MsG0180000023.01 | MsG0680031694.01 | 0.804710 | 1.895177e-49 | 9.840752e-47 |
MsG0180000023.01 | MsG0680031699.01 | 0.813791 | 2.140090e-51 | 1.411017e-48 |
MsG0180000023.01 | MsG0680031805.01 | -0.811950 | 5.416461e-51 | 3.398711e-48 |
MsG0180000023.01 | MsG0680031967.01 | 0.801027 | 1.092852e-48 | 5.165560e-46 |
MsG0180000023.01 | MsG0680034061.01 | 0.831884 | 1.295871e-55 | 1.425192e-52 |
MsG0180000023.01 | MsG0680034671.01 | 0.803283 | 3.752790e-49 | 1.878323e-46 |
MsG0180000023.01 | MsG0680035306.01 | 0.828136 | 1.063116e-54 | 1.047467e-51 |
MsG0180000023.01 | MsG0680035854.01 | 0.808954 | 2.403071e-50 | 1.392712e-47 |
MsG0180000023.01 | MsG0780036240.01 | 0.855863 | 4.740917e-62 | 1.110114e-58 |
MsG0180000023.01 | MsG0780038400.01 | 0.823468 | 1.362585e-53 | 1.174215e-50 |
MsG0180000023.01 | MsG0780038443.01 | 0.803447 | 3.470241e-49 | 1.744305e-46 |
MsG0180000023.01 | MsG0780039340.01 | 0.822695 | 2.064265e-53 | 1.740521e-50 |
MsG0180000023.01 | MsG0780039570.01 | 0.832208 | 1.077463e-55 | 1.196082e-52 |
MsG0180000023.01 | MsG0780039717.01 | 0.801726 | 7.859836e-49 | 3.780840e-46 |
MsG0180000023.01 | MsG0780039828.01 | 0.803130 | 4.036726e-49 | 2.012508e-46 |
MsG0180000023.01 | MsG0780039845.01 | 0.804537 | 2.059550e-49 | 1.064603e-46 |
MsG0180000023.01 | MsG0780039943.01 | 0.827012 | 1.978940e-54 | 1.886745e-51 |
MsG0180000023.01 | MsG0780040125.01 | 0.803881 | 2.820879e-49 | 1.433847e-46 |
MsG0180000023.01 | MsG0780040338.01 | 0.806817 | 6.842911e-50 | 3.750478e-47 |
MsG0180000023.01 | MsG0780040418.01 | 0.812669 | 3.774033e-51 | 2.414248e-48 |
MsG0180000023.01 | MsG0780040718.01 | 0.817153 | 3.821828e-52 | 2.761658e-49 |
MsG0180000023.01 | MsG0780040845.01 | 0.801332 | 9.467411e-49 | 4.509159e-46 |
MsG0180000023.01 | MsG0780040861.01 | 0.835627 | 1.503018e-56 | 1.848315e-53 |
MsG0180000023.01 | MsG0780041223.01 | 0.834109 | 3.623924e-56 | 4.258351e-53 |
MsG0180000023.01 | MsG0780041295.01 | 0.820967 | 5.184906e-53 | 4.163689e-50 |
MsG0180000023.01 | MsG0780041300.01 | 0.809052 | 2.289463e-50 | 1.330411e-47 |
MsG0180000023.01 | MsG0780041423.01 | 0.826520 | 2.593522e-54 | 2.437843e-51 |
MsG0180000023.01 | MsG0780041490.01 | 0.836424 | 9.435766e-57 | 1.188624e-53 |
MsG0180000023.01 | MsG0880042033.01 | 0.815505 | 8.932516e-52 | 6.170126e-49 |
MsG0180000023.01 | MsG0880042128.01 | 0.829911 | 3.948148e-55 | 4.097213e-52 |
MsG0180000023.01 | MsG0880042129.01 | 0.830463 | 2.895930e-55 | 3.052952e-52 |
MsG0180000023.01 | MsG0880042399.01 | -0.800341 | 1.507925e-48 | 7.004363e-46 |
MsG0180000023.01 | MsG0880042795.01 | 0.823971 | 1.039223e-53 | 9.083917e-51 |
MsG0180000023.01 | MsG0880042829.01 | 0.802780 | 4.770118e-49 | 2.357166e-46 |
MsG0180000023.01 | MsG0880043082.01 | 0.805980 | 1.027328e-49 | 5.511491e-47 |
MsG0180000023.01 | MsG0880043194.01 | 0.803528 | 3.338797e-49 | 1.681806e-46 |
MsG0180000023.01 | MsG0880043252.01 | 0.800680 | 1.286745e-48 | 6.028185e-46 |
MsG0180000023.01 | MsG0880043592.01 | 0.800839 | 1.194011e-48 | 5.616574e-46 |
MsG0180000023.01 | MsG0880043886.01 | 0.836494 | 9.053649e-57 | 1.142822e-53 |
MsG0180000023.01 | MsG0880045583.01 | 0.823197 | 1.576437e-53 | 1.348165e-50 |
MsG0180000023.01 | MsG0880045631.01 | 0.817757 | 2.794640e-52 | 2.053127e-49 |
MsG0180000023.01 | MsG0880045656.01 | 0.832512 | 9.060942e-56 | 1.015019e-52 |
MsG0180000023.01 | MsG0880045951.01 | 0.839085 | 1.956721e-57 | 2.673001e-54 |
MsG0180000023.01 | MsG0880046068.01 | 0.813710 | 2.230100e-51 | 1.467189e-48 |
MsG0180000023.01 | MsG0880046074.01 | 0.857991 | 1.118791e-62 | 2.813073e-59 |
MsG0180000023.01 | MsG0880046091.01 | 0.823817 | 1.128935e-53 | 9.826145e-51 |
MsG0180000023.01 | MsG0880046177.01 | 0.853875 | 1.788759e-61 | 3.922000e-58 |
MsG0180000023.01 | MsG0880046762.01 | 0.819814 | 9.530075e-53 | 7.411373e-50 |
MsG0180000023.01 | MsG0880046933.01 | 0.867296 | 1.519125e-65 | 5.277336e-62 |
MsG0180000023.01 | MsG0880047607.01 | 0.838893 | 2.193335e-57 | 2.978693e-54 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000023.01.T01 | MTR_1g026078 | 88.043 | 92 | 3 | 2 | 1 | 84 | 68 | 159 | 7.14e-46 | 144 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000023.01.T01 | AT1G76060 | 71.250 | 80 | 19 | 1 | 1 | 76 | 75 | 154 | 7.65e-35 | 116 |
Find 17 sgRNAs with CRISPR-Local
Find 18 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGTCACTCGGTTGCTTAT+CGG | 0.353596 | 1:+443116 | MsG0180000023.01.T01:CDS |
ACGATGCCAAAGGCGTTCTA+TGG | 0.381120 | 1:+443027 | MsG0180000023.01.T01:CDS |
AAGGATCGTCGCGGTGGCAG+TGG | 0.428548 | 1:+443191 | MsG0180000023.01.T01:CDS |
ATCACGCCATAGAACGCCTT+TGG | 0.477887 | 1:-443033 | None:intergenic |
TGCGAGGTTTGAGACGGATC+CGG | 0.482393 | 1:+443091 | MsG0180000023.01.T01:CDS |
AGCAACCGAGTGACAATCTC+CGG | 0.496816 | 1:-443110 | None:intergenic |
GATCGTCGCGGTGGCAGTGG+CGG | 0.542143 | 1:+443194 | MsG0180000023.01.T01:CDS |
TTCACATGGCACGATGCCAA+AGG | 0.565614 | 1:+443017 | MsG0180000023.01.T01:CDS |
TGAGCTTGCGAGGTTTGAGA+CGG | 0.591164 | 1:+443085 | MsG0180000023.01.T01:CDS |
GTCACTCGGTTGCTTATCGG+TGG | 0.599413 | 1:+443119 | MsG0180000023.01.T01:CDS |
GTAAAGAGTTTGAGCTTGCG+AGG | 0.613271 | 1:+443075 | MsG0180000023.01.T01:CDS |
GTTGCTTATCGGTGGACGTG+AGG | 0.631369 | 1:+443127 | MsG0180000023.01.T01:CDS |
CAACGCTATTGATAAGCTTG+CGG | 0.647873 | 1:+443157 | MsG0180000023.01.T01:CDS |
ATTCAGAAGGATCGTCGCGG+TGG | 0.657849 | 1:+443185 | MsG0180000023.01.T01:CDS |
GCTTGCGGAACAGATTCAGA+AGG | 0.661253 | 1:+443172 | MsG0180000023.01.T01:CDS |
CGGATCCGGAGATTGTCACT+CGG | 0.686306 | 1:+443105 | MsG0180000023.01.T01:CDS |
CAGATTCAGAAGGATCGTCG+CGG | 0.756987 | 1:+443182 | MsG0180000023.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATTGTCACTCGGTTGCTTAT+CGG | + | Chr1:443116-443135 | MsG0180000023.01.T01:CDS | 40.0% | |
CAACGCTATTGATAAGCTTG+CGG | + | Chr1:443157-443176 | MsG0180000023.01.T01:CDS | 40.0% | |
! | GTGCTTCACGATTTTTCACA+TGG | + | Chr1:443003-443022 | MsG0180000023.01.T01:CDS | 40.0% |
GTAAAGAGTTTGAGCTTGCG+AGG | + | Chr1:443075-443094 | MsG0180000023.01.T01:CDS | 45.0% | |
AGCAACCGAGTGACAATCTC+CGG | - | Chr1:443113-443132 | None:intergenic | 50.0% | |
ATCACGCCATAGAACGCCTT+TGG | - | Chr1:443036-443055 | None:intergenic | 50.0% | |
CAGATTCAGAAGGATCGTCG+CGG | + | Chr1:443182-443201 | MsG0180000023.01.T01:CDS | 50.0% | |
GCTTGCGGAACAGATTCAGA+AGG | + | Chr1:443172-443191 | MsG0180000023.01.T01:CDS | 50.0% | |
TGAGCTTGCGAGGTTTGAGA+CGG | + | Chr1:443085-443104 | MsG0180000023.01.T01:CDS | 50.0% | |
TTCACATGGCACGATGCCAA+AGG | + | Chr1:443017-443036 | MsG0180000023.01.T01:CDS | 50.0% | |
!! | ACGATGCCAAAGGCGTTCTA+TGG | + | Chr1:443027-443046 | MsG0180000023.01.T01:CDS | 50.0% |
ATTCAGAAGGATCGTCGCGG+TGG | + | Chr1:443185-443204 | MsG0180000023.01.T01:CDS | 55.0% | |
CGGATCCGGAGATTGTCACT+CGG | + | Chr1:443105-443124 | MsG0180000023.01.T01:CDS | 55.0% | |
GTCACTCGGTTGCTTATCGG+TGG | + | Chr1:443119-443138 | MsG0180000023.01.T01:CDS | 55.0% | |
GTTGCTTATCGGTGGACGTG+AGG | + | Chr1:443127-443146 | MsG0180000023.01.T01:CDS | 55.0% | |
! | TGCGAGGTTTGAGACGGATC+CGG | + | Chr1:443091-443110 | MsG0180000023.01.T01:CDS | 55.0% |
AAGGATCGTCGCGGTGGCAG+TGG | + | Chr1:443191-443210 | MsG0180000023.01.T01:CDS | 65.0% | |
GATCGTCGCGGTGGCAGTGG+CGG | + | Chr1:443194-443213 | MsG0180000023.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 442978 | 443232 | 442978 | ID=MsG0180000023.01;Name=MsG0180000023.01 |
Chr1 | mRNA | 442978 | 443232 | 442978 | ID=MsG0180000023.01.T01;Parent=MsG0180000023.01;Name=MsG0180000023.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|84 |
Chr1 | exon | 442978 | 443232 | 442978 | ID=MsG0180000023.01.T01:exon:7855;Parent=MsG0180000023.01.T01 |
Chr1 | CDS | 442978 | 443232 | 442978 | ID=MsG0180000023.01.T01:cds;Parent=MsG0180000023.01.T01 |
Gene Sequence |
Protein sequence |