AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031712.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031712.01.T01 MTR_6g033010 84.191 272 8 1 1 272 1 237 1.69e-146 412
MsG0680031712.01.T01 MTR_6g033010 82.051 234 7 1 1 234 1 199 1.37e-113 327
MsG0680031712.01.T01 MTR_6g033010 79.098 244 11 2 1 244 1 204 4.79e-112 324
MsG0680031712.01.T01 MTR_7g085070 58.545 275 79 1 1 275 2 241 1.93e-107 313
MsG0680031712.01.T01 MTR_4g049340 45.489 266 104 3 6 270 5 230 4.09e-65 205
MsG0680031712.01.T01 MTR_7g088310 27.536 276 129 8 9 272 10 226 1.11e-18 84.0
MsG0680031712.01.T01 MTR_6g061700 69.048 42 13 0 277 318 23 64 1.23e-11 61.6
MsG0680031712.01.T01 MTR_4g051130 66.667 42 14 0 277 318 948 989 7.80e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031712.01.T01 AT3G04090 44.444 270 107 4 1 270 1 227 9.97e-71 219
MsG0680031712.01.T01 AT5G18290 42.857 273 115 3 6 277 5 237 1.41e-68 214
MsG0680031712.01.T01 AT5G18290 42.857 273 115 3 6 277 5 237 1.41e-68 214
MsG0680031712.01.T01 AT3G56950 27.376 263 142 5 11 272 10 224 2.92e-21 90.9
MsG0680031712.01.T01 AT3G56950 27.170 265 144 5 9 272 8 224 5.59e-21 90.9

Find 52 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATCATGTGACTATATTT+TGG 0.205285 6:+25139729 None:intergenic
GTTAGACAACAACCCCTTAA+AGG 0.212213 6:-25135778 MsG0680031712.01.T01:CDS
TTCTGATACTCTTGTCTCTA+TGG 0.239383 6:-25140697 MsG0680031712.01.T01:CDS
TACTGCCATTGGTAATGCTT+TGG 0.277983 6:-25140775 MsG0680031712.01.T01:CDS
GGCTGGTGCTAAGGCAATTA+AGG 0.306023 6:-25139763 MsG0680031712.01.T01:CDS
TCTTTCTATGCTGCTGGTCT+TGG 0.318211 6:-25140720 MsG0680031712.01.T01:CDS
TACTGGATTTGTCCATTCAT+TGG 0.326816 6:-25136595 MsG0680031712.01.T01:CDS
AATGTTGTAATTATAATAAA+TGG 0.340508 6:+25140825 None:intergenic
CTTCAATTTGTGACATATAA+TGG 0.348271 6:-25140858 MsG0680031712.01.T01:CDS
TTGAAGGTTGATTTGCATAC+TGG 0.359493 6:-25139696 MsG0680031712.01.T01:CDS
GGCTATTCGTTTCCCTGCTC+AGG 0.361454 6:-25140676 MsG0680031712.01.T01:intron
ACTGCCATTGGTAATGCTTT+GGG 0.373544 6:-25140774 MsG0680031712.01.T01:CDS
AGTTATGTTACACAGGCATT+AGG 0.415587 6:-25139792 MsG0680031712.01.T01:intron
GATTGGAGGACCTGCTTTGA+AGG 0.430772 6:-25139712 MsG0680031712.01.T01:CDS
CTTATGATTGAAGGCGTGTT+CGG 0.447809 6:-25140181 MsG0680031712.01.T01:CDS
CCAAAATATAGTCACATGAT+TGG 0.450400 6:-25139729 MsG0680031712.01.T01:CDS
GCAAGTATTGCTCCAATGAA+TGG 0.454161 6:+25136583 None:intergenic
AATGCTTCTTTCTATGCTGC+TGG 0.462327 6:-25140726 MsG0680031712.01.T01:CDS
AATCCAACAAAAGCAGCAAT+AGG 0.463363 6:-25140963 MsG0680031712.01.T01:CDS
GTTGGGCATACTTAGACAAC+TGG 0.476439 6:-25136645 MsG0680031712.01.T01:CDS
ACTAGGATAGGATTCATTGA+TGG 0.482882 6:+25139525 None:intergenic
ACAACATGCAGGCGAAATAG+AGG 0.486082 6:-25135737 MsG0680031712.01.T01:CDS
TTGGAGCAATACTTGCTGCT+TGG 0.488680 6:-25136576 MsG0680031712.01.T01:CDS
GATAGGATTCATTGATGGTC+CGG 0.492962 6:+25139530 None:intergenic
GCACATACACTTATGATTGA+AGG 0.495432 6:-25140190 MsG0680031712.01.T01:CDS
AGAAAGAAGCATTTCCTGTA+GGG 0.496577 6:+25140736 None:intergenic
AGGTGCAGTGGCTGGTGCTA+AGG 0.499134 6:-25139772 MsG0680031712.01.T01:CDS
AATGAATCACTTACTAGGAT+AGG 0.501347 6:+25139513 None:intergenic
ATGTTTATATCTTCAACACT+TGG 0.520569 6:-25140915 MsG0680031712.01.T01:CDS
TAGACAACTGGCACCACACA+TGG 0.532310 6:-25136633 MsG0680031712.01.T01:CDS
GGTGCAAGTTTCAACCCTAC+AGG 0.540289 6:-25140750 MsG0680031712.01.T01:CDS
TGCAAATCAACCTTCAAAGC+AGG 0.540861 6:+25139702 None:intergenic
GACAACAACCCCTTAAAGGA+AGG 0.541111 6:-25135774 MsG0680031712.01.T01:CDS
TAGAAAGAAGCATTTCCTGT+AGG 0.555948 6:+25140735 None:intergenic
AATCATAGCTACGGTCGACA+CGG 0.578906 6:+25139572 None:intergenic
CAGGCATTAGGTGCAGTGGC+TGG 0.583997 6:-25139780 MsG0680031712.01.T01:CDS
ATGCAGGCGAAATAGAGGCT+TGG 0.584749 6:-25135732 MsG0680031712.01.T01:CDS
CATACTGGAGCTATTGCAGA+AGG 0.585895 6:-25139681 MsG0680031712.01.T01:CDS
GTTCTCTTCATCTTGCTCAG+AGG 0.586421 6:-25139630 MsG0680031712.01.T01:CDS
AAATATAGTCACATGATTGG+AGG 0.596252 6:-25139726 MsG0680031712.01.T01:CDS
GCCATTGGTAATGCTTTGGG+TGG 0.600500 6:-25140771 MsG0680031712.01.T01:CDS
TACACAGGCATTAGGTGCAG+TGG 0.609819 6:-25139784 MsG0680031712.01.T01:intron
ACCGATGAGAATCATAGCTA+CGG 0.619659 6:+25139563 None:intergenic
ACCGTAGCTATGATTCTCAT+CGG 0.620550 6:-25139564 MsG0680031712.01.T01:CDS
ACAACAACCCCTTAAAGGAA+GGG 0.628849 6:-25135773 MsG0680031712.01.T01:CDS
CTCATCGGTTCTGCTTACAC+CGG 0.636201 6:-25139549 MsG0680031712.01.T01:CDS
CTTAAAGGAAGGGTAAAACA+AGG 0.640976 6:-25135763 MsG0680031712.01.T01:CDS
CATAAAATTGATCCCATGTG+TGG 0.655239 6:+25136620 None:intergenic
AAACAAGGAAGACAACATGC+AGG 0.657291 6:-25135748 MsG0680031712.01.T01:CDS
AGACAACTGGCACCACACAT+GGG 0.677407 6:-25136632 MsG0680031712.01.T01:CDS
ACCACCCAAAGCATTACCAA+TGG 0.682828 6:+25140770 None:intergenic
GTCTTCATGAACTCACTACG+AGG 0.738023 6:+25139606 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTTGTAATTATAATAAA+TGG + Chr6:25135924-25135943 None:intergenic 10.0%
!!! GTCTTTTTATTTTTTATTTT+TGG - Chr6:25136113-25136132 MsG0680031712.01.T01:intron 10.0%
!!! TATTTTTTATTTTTGGATTT+TGG - Chr6:25136120-25136139 MsG0680031712.01.T01:intron 10.0%
!! AAAAGAATTACAAAAACAAA+TGG + Chr6:25138500-25138519 None:intergenic 15.0%
!! ACTAACTACAATTAATATAA+GGG + Chr6:25140656-25140675 None:intergenic 15.0%
!! CAACATAATTATATAAGTTA+CGG + Chr6:25140825-25140844 None:intergenic 15.0%
!! CTTATAGAAAATATATTACT+TGG - Chr6:25136674-25136693 MsG0680031712.01.T01:intron 15.0%
!!! AGGTTTTTATTTATTTCAAA+AGG - Chr6:25136090-25136109 MsG0680031712.01.T01:intron 15.0%
!!! ATAAGTTGATGATAAATTAT+AGG - Chr6:25140919-25140938 MsG0680031712.01.T01:CDS 15.0%
!!! ATTTTAGATGATTTATGTTA+AGG - Chr6:25136149-25136168 MsG0680031712.01.T01:intron 15.0%
!!! CAAGTAATATATTTTCTATA+AGG + Chr6:25136676-25136695 None:intergenic 15.0%
!!! GATAATATAATTTTGTTATC+AGG - Chr6:25140390-25140409 MsG0680031712.01.T01:intron 15.0%
!!! GATTTTTTAGTTGTAAATTA+CGG - Chr6:25140889-25140908 MsG0680031712.01.T01:CDS 15.0%
!!! GGTTTTTATTTATTTCAAAA+GGG - Chr6:25136091-25136110 MsG0680031712.01.T01:intron 15.0%
!! AAAAACGCAACAAAAATATA+TGG + Chr6:25137391-25137410 None:intergenic 20.0%
!! AAAAATTGTCAAAAGGATTA+AGG + Chr6:25139410-25139429 None:intergenic 20.0%
!! AATCATTCTATTACATGAAA+TGG + Chr6:25140417-25140436 None:intergenic 20.0%
!! ACAAAATTGACAAAATAAAG+TGG + Chr6:25139847-25139866 None:intergenic 20.0%
!! AGATAGAAGAGAAAAAAAAA+TGG - Chr6:25135758-25135777 MsG0680031712.01.T01:CDS 20.0%
!! ATTGAATCTAATTACTATGT+TGG + Chr6:25138863-25138882 None:intergenic 20.0%
!! CAATAAAAATTAATGTGAGT+AGG + Chr6:25139132-25139151 None:intergenic 20.0%
!! CACTAACTACAATTAATATA+AGG + Chr6:25140657-25140676 None:intergenic 20.0%
!! GAACTTATATTATCATCAAA+TGG + Chr6:25139448-25139467 None:intergenic 20.0%
!! TTATTAATAACAGCTTGTAT+AGG + Chr6:25140274-25140293 None:intergenic 20.0%
!!! AATTGATTTGGCATATTTTT+AGG + Chr6:25138230-25138249 None:intergenic 20.0%
!!! ACTCTAATTTTGCTTTAATT+TGG - Chr6:25139176-25139195 MsG0680031712.01.T01:intron 20.0%
!!! ATCAATAAAAATAATGGACA+TGG + Chr6:25139953-25139972 None:intergenic 20.0%
!!! ATGATAATATAAGTTCCTTT+TGG - Chr6:25139452-25139471 MsG0680031712.01.T01:intron 20.0%
!!! ATTGATTTGGCATATTTTTA+GGG + Chr6:25138229-25138248 None:intergenic 20.0%
!!! CAATAGTTTTGTTATTTCTT+TGG - Chr6:25140502-25140521 MsG0680031712.01.T01:intron 20.0%
!!! GTCAAAATTATTACTTTTGT+CGG - Chr6:25136604-25136623 MsG0680031712.01.T01:CDS 20.0%
!!! TGATAATATAAGTTCCTTTT+GGG - Chr6:25139453-25139472 MsG0680031712.01.T01:intron 20.0%
! AAAATTAGAGTAGTTCATCT+AGG + Chr6:25139167-25139186 None:intergenic 25.0%
! AAATAAATAAAAACCTGAGC+AGG + Chr6:25136086-25136105 None:intergenic 25.0%
! AAGTATACCAATCATTAACA+TGG + Chr6:25140061-25140080 None:intergenic 25.0%
! AATAAATAAAAACCTGAGCA+GGG + Chr6:25136085-25136104 None:intergenic 25.0%
! AATTGACAAAATAAAGTGGT+CGG + Chr6:25139843-25139862 None:intergenic 25.0%
! ACAAGCAAAAAATTGTCAAA+AGG + Chr6:25139417-25139436 None:intergenic 25.0%
! ACCAATGATAACATGAAAAA+CGG + Chr6:25137269-25137288 None:intergenic 25.0%
! AGAGTGACAATTAAAATAGA+CGG - Chr6:25140713-25140732 MsG0680031712.01.T01:CDS 25.0%
! ATAAAATGAGTGAGTAACAT+GGG + Chr6:25137627-25137646 None:intergenic 25.0%
! ATCAATTTCTTTAACCTTGA+TGG - Chr6:25138243-25138262 MsG0680031712.01.T01:intron 25.0%
! ATCTATAAATTCCAACTTTG+TGG + Chr6:25137483-25137502 None:intergenic 25.0%
! ATGTTTATATCTTCAACACT+TGG - Chr6:25135831-25135850 MsG0680031712.01.T01:intron 25.0%
! ATTATTACTACTGTTGTATC+CGG - Chr6:25136257-25136276 MsG0680031712.01.T01:intron 25.0%
! ATTATTCATTGTAGTGAATC+GGG + Chr6:25139627-25139646 None:intergenic 25.0%
! CAAGGTTAAAGAAATTGATT+TGG + Chr6:25138242-25138261 None:intergenic 25.0%
! CAATGGTAATTTGGTTAAAA+CGG + Chr6:25137952-25137971 None:intergenic 25.0%
! CATAATTATATAAGTTACGG+TGG + Chr6:25140822-25140841 None:intergenic 25.0%
! CGATTCACAATTCAAAAAAT+AGG - Chr6:25140001-25140020 MsG0680031712.01.T01:intron 25.0%
! CTTCAATTTGTGACATATAA+TGG - Chr6:25135888-25135907 MsG0680031712.01.T01:intron 25.0%
! GAAAAAATGAATCACTTACT+AGG + Chr6:25137241-25137260 None:intergenic 25.0%
! GATTATTCATTGTAGTGAAT+CGG + Chr6:25139628-25139647 None:intergenic 25.0%
! GATTTATGACTCGAATTATT+CGG - Chr6:25139895-25139914 MsG0680031712.01.T01:intron 25.0%
! TATAAAATGAGTGAGTAACA+TGG + Chr6:25137628-25137647 None:intergenic 25.0%
! TATAACATTAAGTGCATGTT+TGG + Chr6:25136430-25136449 None:intergenic 25.0%
! TCTATAAATTCCAACTTTGT+GGG + Chr6:25137482-25137501 None:intergenic 25.0%
! TTAAAATCAACCAAACTAGT+CGG + Chr6:25140606-25140625 None:intergenic 25.0%
! TTACAAAATGCTTTCATTGA+TGG + Chr6:25140476-25140495 None:intergenic 25.0%
! TTTGGTTAAAACGGAATAAT+TGG + Chr6:25137943-25137962 None:intergenic 25.0%
!! AAATTATAGGTACGTTTTGA+TGG - Chr6:25140932-25140951 MsG0680031712.01.T01:CDS 25.0%
!! CACTAACTTGTAAATATTGA+CGG + Chr6:25138907-25138926 None:intergenic 25.0%
!! GATAATATAAGTTCCTTTTG+GGG - Chr6:25139454-25139473 MsG0680031712.01.T01:intron 25.0%
!! TAAAGAGGCATAGTAAATAA+TGG - Chr6:25140246-25140265 MsG0680031712.01.T01:intron 25.0%
!! TAGTGATCACATAATTTTAC+CGG + Chr6:25140756-25140775 None:intergenic 25.0%
!! TGTAGTTTTTGTCAAAATCA+CGG - Chr6:25136369-25136388 MsG0680031712.01.T01:intron 25.0%
!! TTGATAACCATGTTAATGAT+TGG - Chr6:25140051-25140070 MsG0680031712.01.T01:intron 25.0%
!!! ACTAGTTTGGTTGATTTTAA+TGG - Chr6:25140606-25140625 MsG0680031712.01.T01:intron 25.0%
!!! ACTTAATGTTATAGCCTTAT+AGG - Chr6:25136437-25136456 MsG0680031712.01.T01:intron 25.0%
!!! ATTTTGTGTTGACTTTTACA+TGG - Chr6:25135808-25135827 MsG0680031712.01.T01:CDS 25.0%
!!! GGTATACTTTTTATTTTTGC+AGG - Chr6:25140072-25140091 MsG0680031712.01.T01:intron 25.0%
!!! TAATTATGTTGATTTTTCGC+TGG - Chr6:25140834-25140853 MsG0680031712.01.T01:CDS 25.0%
!!! TTTTTAGTTGTAAATTACGG+TGG - Chr6:25140892-25140911 MsG0680031712.01.T01:CDS 25.0%
!!! TTTTTATTTTTGCAGGCATA+TGG - Chr6:25140079-25140098 MsG0680031712.01.T01:intron 25.0%
AAAGGACGATTATAATGAGA+CGG + Chr6:25140558-25140577 None:intergenic 30.0%
AAATATAGTCACATGATTGG+AGG - Chr6:25137020-25137039 MsG0680031712.01.T01:intron 30.0%
AATCCTCTTTCGTTATAGTT+TGG - Chr6:25138580-25138599 MsG0680031712.01.T01:intron 30.0%
AATGAATCACTTACTAGGAT+AGG + Chr6:25137236-25137255 None:intergenic 30.0%
AATGACTAAAGAAAAGCTAC+TGG + Chr6:25139874-25139893 None:intergenic 30.0%
AATTATATAAGTTACGGTGG+TGG + Chr6:25140819-25140838 None:intergenic 30.0%
ACCAATGACATTCAATGAAA+TGG + Chr6:25139253-25139272 None:intergenic 30.0%
ACTTCAGATTGAAAACATGT+AGG - Chr6:25138658-25138677 MsG0680031712.01.T01:intron 30.0%
ACTTGAATTATTCAGACGTT+AGG - Chr6:25139727-25139746 MsG0680031712.01.T01:CDS 30.0%
ATATGACAATTGTAGTTGCA+GGG - Chr6:25136838-25136857 MsG0680031712.01.T01:intron 30.0%
ATGATTCATTGTAGTGAATC+GGG + Chr6:25139804-25139823 None:intergenic 30.0%
ATTAACGAGTTATGTTACAC+AGG - Chr6:25136947-25136966 MsG0680031712.01.T01:intron 30.0%
CCAAAATATAGTCACATGAT+TGG - Chr6:25137017-25137036 MsG0680031712.01.T01:intron 30.0%
CCAATGACATTCAATGAAAT+GGG + Chr6:25139252-25139271 None:intergenic 30.0%
CTATAAATTCCAACTTTGTG+GGG + Chr6:25137481-25137500 None:intergenic 30.0%
CTCATTATAATCGTCCTTTA+AGG - Chr6:25140559-25140578 MsG0680031712.01.T01:intron 30.0%
CTGATATATGCTGTATAACA+CGG + Chr6:25139104-25139123 None:intergenic 30.0%
CTTAAGTAGTAAGCTAACAA+TGG + Chr6:25137969-25137988 None:intergenic 30.0%
GATGATTCATTGTAGTGAAT+CGG + Chr6:25139805-25139824 None:intergenic 30.0%
GTAAGCTAACAATGGTAATT+TGG + Chr6:25137961-25137980 None:intergenic 30.0%
GTTTGGATTCACAATGAATT+TGG + Chr6:25136413-25136432 None:intergenic 30.0%
TATCTGTGTCAGTATGATAT+TGG - Chr6:25138943-25138962 MsG0680031712.01.T01:intron 30.0%
TCGTTAACAGTATATCACTT+TGG + Chr6:25139026-25139045 None:intergenic 30.0%
TGGCTTAGTGAAATTATGTT+GGG - Chr6:25136482-25136501 MsG0680031712.01.T01:intron 30.0%
TTATGTGATCACTAGAGTAA+AGG - Chr6:25140762-25140781 MsG0680031712.01.T01:CDS 30.0%
TTCATTGAATGTCATTGGTA+TGG - Chr6:25139254-25139273 MsG0680031712.01.T01:intron 30.0%
! AAAACAGAAAAAGCGTAAAG+AGG - Chr6:25140231-25140250 MsG0680031712.01.T01:intron 30.0%
! AGTGATCACATAATTTTACC+GGG + Chr6:25140755-25140774 None:intergenic 30.0%
! CCAATCATGTGACTATATTT+TGG + Chr6:25137020-25137039 None:intergenic 30.0%
! GGGATCAATTTTATGTTTAC+TGG - Chr6:25140134-25140153 MsG0680031712.01.T01:CDS 30.0%
!! ATCATGTGACTATATTTTGG+TGG + Chr6:25137017-25137036 None:intergenic 30.0%
!! ATCTTTACTTTTACTGCCAT+TGG - Chr6:25135960-25135979 MsG0680031712.01.T01:intron 30.0%
!! ATGTTTTCAATCTGAAGTGT+TGG + Chr6:25138656-25138675 None:intergenic 30.0%
!! TAATTTTGACGTGTCTGTAT+CGG + Chr6:25136594-25136613 None:intergenic 30.0%
!! TTGTTTTACCCTTCCTTTAA+GGG + Chr6:25140984-25141003 None:intergenic 30.0%
!! TTTGGCTATGATTAGTTTCA+CGG - Chr6:25139194-25139213 MsG0680031712.01.T01:intron 30.0%
!!! TGTTTTTTTACCACTTGTTG+TGG + Chr6:25140217-25140236 None:intergenic 30.0%
AAGTGAGAGTCTCAAACTTT+AGG + Chr6:25137358-25137377 None:intergenic 35.0%
AATAAACTTCCCCACAAAGT+TGG - Chr6:25137469-25137488 MsG0680031712.01.T01:intron 35.0%
AATAGACGGAGAGAGTAATT+TGG - Chr6:25140727-25140746 MsG0680031712.01.T01:CDS 35.0%
AATCATGCCAGAGTAAACTA+CGG + Chr6:25138455-25138474 None:intergenic 35.0%
AATCCAACAAAAGCAGCAAT+AGG - Chr6:25135783-25135802 MsG0680031712.01.T01:CDS 35.0%
ACCGTCATAGCAGATTATAA+CGG + Chr6:25138779-25138798 None:intergenic 35.0%
ACTAGGATAGGATTCATTGA+TGG + Chr6:25137224-25137243 None:intergenic 35.0%
AGAACTAGCACAATCCTTAA+AGG + Chr6:25140576-25140595 None:intergenic 35.0%
AGTCCTCACTCCAAATAAAA+TGG - Chr6:25138355-25138374 MsG0680031712.01.T01:intron 35.0%
AGTTATGTTACACAGGCATT+AGG - Chr6:25136954-25136973 MsG0680031712.01.T01:intron 35.0%
ATAGACGGAGAGAGTAATTT+GGG - Chr6:25140728-25140747 MsG0680031712.01.T01:CDS 35.0%
ATATTAGCGAGTTCGTACTT+CGG + Chr6:25137536-25137555 None:intergenic 35.0%
ATCTGTAAATGACAGTAGTC+TGG + Chr6:25138039-25138058 None:intergenic 35.0%
ATGTCCATCAGAATCTGTTT+AGG - Chr6:25138010-25138029 MsG0680031712.01.T01:intron 35.0%
ATTCCTCGTATATCTATGCA+CGG + Chr6:25139484-25139503 None:intergenic 35.0%
ATTGACAGAAACATCGTGAT+AGG + Chr6:25139666-25139685 None:intergenic 35.0%
CACACACTGTTATCGAATAT+CGG - Chr6:25138691-25138710 MsG0680031712.01.T01:intron 35.0%
CATAAAATTGATCCCATGTG+TGG + Chr6:25140129-25140148 None:intergenic 35.0%
CATAGATATACGAGGAATCA+TGG - Chr6:25139486-25139505 MsG0680031712.01.T01:intron 35.0%
CATATGACAATTGTAGTTGC+AGG - Chr6:25136837-25136856 MsG0680031712.01.T01:intron 35.0%
CCCATTTCATTGAATGTCAT+TGG - Chr6:25139249-25139268 MsG0680031712.01.T01:intron 35.0%
CGTGTTATACAGCATATATC+AGG - Chr6:25139102-25139121 MsG0680031712.01.T01:intron 35.0%
CTGCAACTACAATTGTCATA+TGG + Chr6:25136839-25136858 None:intergenic 35.0%
CTGGCTTAGTGAAATTATGT+TGG - Chr6:25136481-25136500 MsG0680031712.01.T01:intron 35.0%
CTTAAAGGAAGGGTAAAACA+AGG - Chr6:25140983-25141002 MsG0680031712.01.T01:exon 35.0%
CTTTGTCCAAAGAACATCAT+CGG - Chr6:25137802-25137821 MsG0680031712.01.T01:intron 35.0%
GATTGGAGTCTCATTCTAAT+TGG - Chr6:25138195-25138214 MsG0680031712.01.T01:intron 35.0%
GCACATACACTTATGATTGA+AGG - Chr6:25136556-25136575 MsG0680031712.01.T01:CDS 35.0%
GGTATGAAGTTTGTAGATGT+AGG + Chr6:25139231-25139250 None:intergenic 35.0%
GGTTTGACAACATACCTATA+AGG + Chr6:25136454-25136473 None:intergenic 35.0%
GTGAAATGCAATGTTGATGT+AGG + Chr6:25137767-25137786 None:intergenic 35.0%
TAAAACGGAATAATTGGACG+TGG + Chr6:25137937-25137956 None:intergenic 35.0%
TAATATGACAATAAGACCCG+TGG - Chr6:25137550-25137569 MsG0680031712.01.T01:intron 35.0%
TACTGGATTTGTCCATTCAT+TGG - Chr6:25140151-25140170 MsG0680031712.01.T01:CDS 35.0%
TATTCAACGACAAGCAAGTA+TGG + Chr6:25137453-25137472 None:intergenic 35.0%
TCATAGTGCCAATGTAGTAA+GGG + Chr6:25137834-25137853 None:intergenic 35.0%
TGAGACTCCAATCAAAAGAA+TGG + Chr6:25138188-25138207 None:intergenic 35.0%
TGTTAAGGTGAGTTTCGTAT+CGG - Chr6:25136164-25136183 MsG0680031712.01.T01:intron 35.0%
TTAGTCATTCCACAAATTCC+AGG + Chr6:25138400-25138419 None:intergenic 35.0%
TTCGATGAAATAACGTGACA+CGG - Chr6:25136319-25136338 MsG0680031712.01.T01:intron 35.0%
TTCTGATACTCTTGTCTCTA+TGG - Chr6:25136049-25136068 MsG0680031712.01.T01:intron 35.0%
! ATTTTTGCAGGCATATGGTT+GGG - Chr6:25140084-25140103 MsG0680031712.01.T01:intron 35.0%
! CTTGATGACTGCAAAATTTC+AGG + Chr6:25136795-25136814 None:intergenic 35.0%
! GCAAAATTTCAGGTCAACAT+AGG + Chr6:25136785-25136804 None:intergenic 35.0%
! TGGAAATTAAAGCACCATCA+AGG + Chr6:25138260-25138279 None:intergenic 35.0%
! TGTTGGAGGACCATTTTATT+TGG + Chr6:25138368-25138387 None:intergenic 35.0%
! TGTTTTACCCTTCCTTTAAG+GGG + Chr6:25140983-25141002 None:intergenic 35.0%
!! AGAAAGAAGCATTTCCTGTA+GGG + Chr6:25136013-25136032 None:intergenic 35.0%
!! TAGAAAGAAGCATTTCCTGT+AGG + Chr6:25136014-25136033 None:intergenic 35.0%
!! TATTTTTGCAGGCATATGGT+TGG - Chr6:25140083-25140102 MsG0680031712.01.T01:intron 35.0%
!! TGATTTTTCGCTGGTTGTTA+TGG - Chr6:25140843-25140862 MsG0680031712.01.T01:CDS 35.0%
!! TTGAAGGTTGATTTGCATAC+TGG - Chr6:25137050-25137069 MsG0680031712.01.T01:intron 35.0%
!!! CGTGTATTTTGCTGCTTTAT+AGG - Chr6:25140351-25140370 MsG0680031712.01.T01:intron 35.0%
!!! CTTGTTTTACCCTTCCTTTA+AGG + Chr6:25140985-25141004 None:intergenic 35.0%
!!! GCCGTTTTTCATGTTATCAT+TGG - Chr6:25137265-25137284 MsG0680031712.01.T01:intron 35.0%
!!! TTTTTTACCACTTGTTGTGG+CGG + Chr6:25140214-25140233 None:intergenic 35.0%
AAACAAGGAAGACAACATGC+AGG - Chr6:25140998-25141017 MsG0680031712.01.T01:five_prime_UTR 40.0%
AAGAAGTAAGCTGCAATGCA+TGG + Chr6:25139366-25139385 None:intergenic 40.0%
AATGCTTCTTTCTATGCTGC+TGG - Chr6:25136020-25136039 MsG0680031712.01.T01:intron 40.0%
ACAACAACCCCTTAAAGGAA+GGG - Chr6:25140973-25140992 MsG0680031712.01.T01:exon 40.0%
ACCGATGAGAATCATAGCTA+CGG + Chr6:25137186-25137205 None:intergenic 40.0%
ACCGTAGCTATGATTCTCAT+CGG - Chr6:25137182-25137201 MsG0680031712.01.T01:intron 40.0%
ATACGAGGAATCATGGTTAG+CGG - Chr6:25139493-25139512 MsG0680031712.01.T01:intron 40.0%
ATATCACTGATGCTATCCAC+GGG + Chr6:25137569-25137588 None:intergenic 40.0%
ATCGGCTGATACTTACCATT+GGG + Chr6:25138743-25138762 None:intergenic 40.0%
ATGGTAAGTATCAGCCGATA+TGG - Chr6:25138744-25138763 MsG0680031712.01.T01:intron 40.0%
ATTTCACTAAGCCAGCCTAT+TGG + Chr6:25136476-25136495 None:intergenic 40.0%
CACAGTTAAATCCAGATGCA+AGG + Chr6:25138322-25138341 None:intergenic 40.0%
CATATCACTGATGCTATCCA+CGG + Chr6:25137570-25137589 None:intergenic 40.0%
CCAGTATACTGAAACACATG+AGG + Chr6:25137294-25137313 None:intergenic 40.0%
CCCGTTATAATCTGCTATGA+CGG - Chr6:25138775-25138794 MsG0680031712.01.T01:intron 40.0%
CCGTCATAGCAGATTATAAC+GGG + Chr6:25138778-25138797 None:intergenic 40.0%
CCTCATGTGTTTCAGTATAC+TGG - Chr6:25137291-25137310 MsG0680031712.01.T01:intron 40.0%
CGTGATAGGCTACACTAAAT+AGG + Chr6:25139652-25139671 None:intergenic 40.0%
CTACGGTTCAAGATTGTAGA+TGG + Chr6:25138438-25138457 None:intergenic 40.0%
CTCATAGTGCCAATGTAGTA+AGG + Chr6:25137835-25137854 None:intergenic 40.0%
CTGTTACCGATGATGTTCTT+TGG + Chr6:25137811-25137830 None:intergenic 40.0%
CTTACTACATTGGCACTATG+AGG - Chr6:25137833-25137852 MsG0680031712.01.T01:intron 40.0%
GACGATTATAATGAGACGGA+GGG + Chr6:25140554-25140573 None:intergenic 40.0%
GAGCCAAACTATAACGAAAG+AGG + Chr6:25138586-25138605 None:intergenic 40.0%
GAGGATACACGTAGATTTCA+TGG - Chr6:25136750-25136769 MsG0680031712.01.T01:intron 40.0%
GAGGATTTGCATAGATGTAG+AGG + Chr6:25138567-25138586 None:intergenic 40.0%
GGAGTCTCATTCTAATTGGT+AGG - Chr6:25138199-25138218 MsG0680031712.01.T01:intron 40.0%
GGTATGTTGTCAAACCCAAT+AGG - Chr6:25136458-25136477 MsG0680031712.01.T01:intron 40.0%
GTCTCCTAAACAGATTCTGA+TGG + Chr6:25138017-25138036 None:intergenic 40.0%
GTGATCACTAGAGTAAAGGA+GGG - Chr6:25140766-25140785 MsG0680031712.01.T01:CDS 40.0%
GTTAGACAACAACCCCTTAA+AGG - Chr6:25140968-25140987 MsG0680031712.01.T01:CDS 40.0%
GTTTGTACACAATGTGGTTC+CGG + Chr6:25138300-25138319 None:intergenic 40.0%
TAAGTATCAGCCGATATGGT+GGG - Chr6:25138748-25138767 MsG0680031712.01.T01:intron 40.0%
TATGTGTTTGCATCTGACAC+CGG - Chr6:25136188-25136207 MsG0680031712.01.T01:intron 40.0%
TCAGTATGATATTGGTACGC+TGG - Chr6:25138951-25138970 MsG0680031712.01.T01:intron 40.0%
TCATATCCTTCTTGCTCTCT+CGG - Chr6:25136704-25136723 MsG0680031712.01.T01:intron 40.0%
TCTTGAACCGTAGTTTACTC+TGG - Chr6:25138445-25138464 MsG0680031712.01.T01:intron 40.0%
TGATCACTAGAGTAAAGGAG+GGG - Chr6:25140767-25140786 MsG0680031712.01.T01:CDS 40.0%
TGCAAATCAACCTTCAAAGC+AGG + Chr6:25137047-25137066 None:intergenic 40.0%
TGCAAGGTTTGTACACAATG+TGG + Chr6:25138306-25138325 None:intergenic 40.0%
TGTAGATGGAAGATTGACGA+TGG + Chr6:25138424-25138443 None:intergenic 40.0%
TGTGATCACTAGAGTAAAGG+AGG - Chr6:25140765-25140784 MsG0680031712.01.T01:CDS 40.0%
TTGATGTAGGAGTTCATAGC+AGG + Chr6:25137754-25137773 None:intergenic 40.0%
TTGCACATAGAACAGTGTAG+AGG - Chr6:25138157-25138176 MsG0680031712.01.T01:intron 40.0%
TTGTGTACAAACCTTGCATC+TGG - Chr6:25138308-25138327 MsG0680031712.01.T01:intron 40.0%
TTTCACTAAGCCAGCCTATT+GGG + Chr6:25136475-25136494 None:intergenic 40.0%
TTTGGACAAAGCCTTCTCAA+GGG + Chr6:25137793-25137812 None:intergenic 40.0%
TTTGTACACAATGTGGTTCC+GGG + Chr6:25138299-25138318 None:intergenic 40.0%
! ATTTGGAGTGAGGACTATTG+CGG + Chr6:25138351-25138370 None:intergenic 40.0%
! CTTATGATTGAAGGCGTGTT+CGG - Chr6:25136565-25136584 MsG0680031712.01.T01:CDS 40.0%
! GATAGGATTCATTGATGGTC+CGG + Chr6:25137219-25137238 None:intergenic 40.0%
! GCAAGTATTGCTCCAATGAA+TGG + Chr6:25140166-25140185 None:intergenic 40.0%
! GGACAGACCATTCTTTTGAT+TGG - Chr6:25138178-25138197 MsG0680031712.01.T01:intron 40.0%
! TATCGGCTGATACTTACCAT+TGG + Chr6:25138744-25138763 None:intergenic 40.0%
! TCATAGCAGGCTCGATTTTA+GGG + Chr6:25137741-25137760 None:intergenic 40.0%
! TCATGTTTTGTCAGCAGTGT+TGG + Chr6:25138838-25138857 None:intergenic 40.0%
! TCTTGAAGAACCGACTAGTT+TGG - Chr6:25140593-25140612 MsG0680031712.01.T01:intron 40.0%
! TGCAGATTGGTTGTAAGCTA+AGG + Chr6:25137861-25137880 None:intergenic 40.0%
! TTCATAGCAGGCTCGATTTT+AGG + Chr6:25137742-25137761 None:intergenic 40.0%
! TTTTTCCTTGTGCACGATAG+AGG + Chr6:25139000-25139019 None:intergenic 40.0%
!! ACTGCCATTGGTAATGCTTT+GGG - Chr6:25135972-25135991 MsG0680031712.01.T01:intron 40.0%
!! ATTACTTTTGTCGGCATGTC+TGG - Chr6:25136613-25136632 MsG0680031712.01.T01:CDS 40.0%
!! CTCGATTTTAGGGATCATGA+AGG + Chr6:25137731-25137750 None:intergenic 40.0%
!! GCTTAACTTGTGACTTGTGT+TGG - Chr6:25136860-25136879 MsG0680031712.01.T01:intron 40.0%
!! GGACCATTTTATTTGGAGTG+AGG + Chr6:25138361-25138380 None:intergenic 40.0%
!! TACTGCCATTGGTAATGCTT+TGG - Chr6:25135971-25135990 MsG0680031712.01.T01:intron 40.0%
!! TTACGGTGGTGGTAGATTTT+CGG + Chr6:25140808-25140827 None:intergenic 40.0%
!! TTTTTCGCTGGTTGTTATGG+TGG - Chr6:25140846-25140865 MsG0680031712.01.T01:CDS 40.0%
!!! TATGGTGGTGGATTTTTCAG+TGG - Chr6:25140861-25140880 MsG0680031712.01.T01:CDS 40.0%
!!! TCTCCTATTGCTGCTTTTGT+TGG + Chr6:25135789-25135808 None:intergenic 40.0%
!!! TTTTTACCACTTGTTGTGGC+GGG + Chr6:25140213-25140232 None:intergenic 40.0%
AAAATGGTCCTCCAACACAG+AGG - Chr6:25138371-25138390 MsG0680031712.01.T01:intron 45.0%
AAATGGTCCTCCAACACAGA+GGG - Chr6:25138372-25138391 MsG0680031712.01.T01:intron 45.0%
AACGGGAAAACCCACCATAT+CGG + Chr6:25138761-25138780 None:intergenic 45.0%
AACTGACACGACATAGACAC+CGG + Chr6:25136279-25136298 None:intergenic 45.0%
AATCATAGCTACGGTCGACA+CGG + Chr6:25137177-25137196 None:intergenic 45.0%
AATCTCGATCTGGATTGCAG+AGG - Chr6:25136731-25136750 MsG0680031712.01.T01:intron 45.0%
ACAACATGCAGGCGAAATAG+AGG - Chr6:25141009-25141028 MsG0680031712.01.T01:five_prime_UTR 45.0%
ACAGATAATCCCCAGCAAAC+TGG - Chr6:25138053-25138072 MsG0680031712.01.T01:intron 45.0%
CATACTGGAGCTATTGCAGA+AGG - Chr6:25137065-25137084 MsG0680031712.01.T01:intron 45.0%
CTGCAATCCAGATCGAGATT+GGG + Chr6:25136731-25136750 None:intergenic 45.0%
CTGTACATGGAAAGAGCTCA+TGG - Chr6:25138114-25138133 MsG0680031712.01.T01:intron 45.0%
CTTTGGACAAAGCCTTCTCA+AGG + Chr6:25137794-25137813 None:intergenic 45.0%
GAATAATTGGACGTGGAACC+AGG + Chr6:25137930-25137949 None:intergenic 45.0%
GACAACAACCCCTTAAAGGA+AGG - Chr6:25140972-25140991 MsG0680031712.01.T01:CDS 45.0%
GCGGTTATGCAGGTAAAAGA+GGG + Chr6:25137675-25137694 None:intergenic 45.0%
GGACGATTATAATGAGACGG+AGG + Chr6:25140555-25140574 None:intergenic 45.0%
GGTAACAGCCCTTACTACAT+TGG - Chr6:25137823-25137842 MsG0680031712.01.T01:intron 45.0%
GTAAGTATCAGCCGATATGG+TGG - Chr6:25138747-25138766 MsG0680031712.01.T01:intron 45.0%
GTACCGTGCATAGATATACG+AGG - Chr6:25139478-25139497 MsG0680031712.01.T01:intron 45.0%
GTATGATATTGGTACGCTGG+TGG - Chr6:25138954-25138973 MsG0680031712.01.T01:intron 45.0%
GTCTTCATGAACTCACTACG+AGG + Chr6:25137143-25137162 None:intergenic 45.0%
GTTCTCTTCATCTTGCTCAG+AGG - Chr6:25137116-25137135 MsG0680031712.01.T01:intron 45.0%
GTTGGGCATACTTAGACAAC+TGG - Chr6:25140101-25140120 MsG0680031712.01.T01:intron 45.0%
TATGCAGGTAAAAGAGGGTG+AGG + Chr6:25137670-25137689 None:intergenic 45.0%
TCGGCTGATACTTACCATTG+GGG + Chr6:25138742-25138761 None:intergenic 45.0%
TCTGCAATCCAGATCGAGAT+TGG + Chr6:25136732-25136751 None:intergenic 45.0%
TGCGGTTATGCAGGTAAAAG+AGG + Chr6:25137676-25137695 None:intergenic 45.0%
TGGTTACTGGTCACTGTACA+TGG - Chr6:25138101-25138120 MsG0680031712.01.T01:intron 45.0%
TGTTGTCAAACCCAATAGGC+TGG - Chr6:25136462-25136481 MsG0680031712.01.T01:intron 45.0%
! ACCACCCAAAGCATTACCAA+TGG + Chr6:25135979-25135998 None:intergenic 45.0%
! AGTGTTGGAGAGCCAAAATC+CGG + Chr6:25138823-25138842 None:intergenic 45.0%
! GTGTTGCTACAAGTTTCTCC+TGG - Chr6:25137909-25137928 MsG0680031712.01.T01:intron 45.0%
! TCTTTCTATGCTGCTGGTCT+TGG - Chr6:25136026-25136045 MsG0680031712.01.T01:intron 45.0%
! TTGCATAGATGTAGAGGTGC+TGG + Chr6:25138561-25138580 None:intergenic 45.0%
! TTGGAGCAATACTTGCTGCT+TGG - Chr6:25140170-25140189 MsG0680031712.01.T01:CDS 45.0%
!! AGGTGCTGGCACATTAATGT+TGG + Chr6:25138547-25138566 None:intergenic 45.0%
!! AGTAATTAATTATATTAAAA+CGG - Chr6:25140678-25140697 MsG0680031712.01.T01:CDS 5.0%
!! TATATTATCAATAAAAATAA+TGG + Chr6:25139959-25139978 None:intergenic 5.0%
AGACAACTGGCACCACACAT+GGG - Chr6:25140114-25140133 MsG0680031712.01.T01:intron 50.0%
AGTGGTCGGCTACACTAAAG+AGG + Chr6:25139829-25139848 None:intergenic 50.0%
ATGCAGGCGAAATAGAGGCT+TGG - Chr6:25141014-25141033 MsG0680031712.01.T01:five_prime_UTR 50.0%
CACATGTATCAGTGTCGTGC+CGG + Chr6:25136210-25136229 None:intergenic 50.0%
CAGATAGAGTTCCACTCTCC+CGG - Chr6:25138278-25138297 MsG0680031712.01.T01:intron 50.0%
CATTTCACCCACCCTTGAGA+AGG - Chr6:25137779-25137798 MsG0680031712.01.T01:intron 50.0%
CCAGTAACCAGTGAGTAAGC+AGG + Chr6:25138091-25138110 None:intergenic 50.0%
CTATGTGCAACGATGAGACG+TGG + Chr6:25138147-25138166 None:intergenic 50.0%
GACAAAGCCTTCTCAAGGGT+GGG + Chr6:25137789-25137808 None:intergenic 50.0%
GATTGGAGGACCTGCTTTGA+AGG - Chr6:25137034-25137053 MsG0680031712.01.T01:intron 50.0%
GGTGCAAGTTTCAACCCTAC+AGG - Chr6:25135996-25136015 MsG0680031712.01.T01:intron 50.0%
GGTTGCTCATACTCGTGTGA+GGG + Chr6:25137432-25137451 None:intergenic 50.0%
TACACAGGCATTAGGTGCAG+TGG - Chr6:25136962-25136981 MsG0680031712.01.T01:intron 50.0%
TAGACAACTGGCACCACACA+TGG - Chr6:25140113-25140132 MsG0680031712.01.T01:intron 50.0%
TATGCACGGTACACCCCAAA+AGG + Chr6:25139470-25139489 None:intergenic 50.0%
TGGTTGCTCATACTCGTGTG+AGG + Chr6:25137433-25137452 None:intergenic 50.0%
TGTGAGGGAGGTCATTGCTT+TGG + Chr6:25137417-25137436 None:intergenic 50.0%
TGTTATCGAATATCGGCGCC+CGG - Chr6:25138698-25138717 MsG0680031712.01.T01:intron 50.0%
TTCCTCCTCTATCGTGCACA+AGG - Chr6:25138992-25139011 MsG0680031712.01.T01:intron 50.0%
TTCCTTGTGCACGATAGAGG+AGG + Chr6:25138997-25139016 None:intergenic 50.0%
! CCTGCTTACTCACTGGTTAC+TGG - Chr6:25138088-25138107 MsG0680031712.01.T01:intron 50.0%
! GGAGAGAGTAATTTGGGACC+CGG - Chr6:25140734-25140753 MsG0680031712.01.T01:CDS 50.0%
! GGCTGGTGCTAAGGCAATTA+AGG - Chr6:25136983-25137002 MsG0680031712.01.T01:intron 50.0%
! TGTTTTCCCGCCACAACAAG+TGG - Chr6:25140204-25140223 MsG0680031712.01.T01:CDS 50.0%
! TTCGCTGGTTGTTATGGTGG+TGG - Chr6:25140849-25140868 MsG0680031712.01.T01:CDS 50.0%
!! CTCATCGGTTCTGCTTACAC+CGG - Chr6:25137197-25137216 MsG0680031712.01.T01:intron 50.0%
!! GCCATTGGTAATGCTTTGGG+TGG - Chr6:25135975-25135994 MsG0680031712.01.T01:intron 50.0%
!!! GGTGGTGGATTTTTCAGTGG+TGG - Chr6:25140864-25140883 MsG0680031712.01.T01:CDS 50.0%
ACAATGTGGTTCCGGGAGAG+TGG + Chr6:25138292-25138311 None:intergenic 55.0%
ACTCGCACCTGCTTACTCAC+TGG - Chr6:25138081-25138100 MsG0680031712.01.T01:intron 55.0%
AGTGAGTAAGCAGGTGCGAG+TGG + Chr6:25138082-25138101 None:intergenic 55.0%
ATTCCAGGTGCCCTCTGTGT+TGG + Chr6:25138385-25138404 None:intergenic 55.0%
CGGGAGAGTGGAACTCTATC+TGG + Chr6:25138280-25138299 None:intergenic 55.0%
CTGCATAACCGCATCTGTCC+AGG - Chr6:25137683-25137702 MsG0680031712.01.T01:intron 55.0%
CTGGACAGATGCGGTTATGC+AGG + Chr6:25137685-25137704 None:intergenic 55.0%
CTTCGCATCCTGGACAGATG+CGG + Chr6:25137694-25137713 None:intergenic 55.0%
GAGCCAAAATCCGGCCATAC+CGG + Chr6:25138814-25138833 None:intergenic 55.0%
GGACAAAGCCTTCTCAAGGG+TGG + Chr6:25137790-25137809 None:intergenic 55.0%
GGCTATTCGTTTCCCTGCTC+AGG - Chr6:25136070-25136089 MsG0680031712.01.T01:intron 55.0%
GGTAAAAGAGGGTGAGGCAG+TGG + Chr6:25137664-25137683 None:intergenic 55.0%
GTGCACGATAGAGGAGGAAG+TGG + Chr6:25138991-25139010 None:intergenic 55.0%
TCTCGGTCCCAATCTCGATC+TGG - Chr6:25136721-25136740 MsG0680031712.01.T01:intron 55.0%
TGCTCATACTCGTGTGAGGG+AGG + Chr6:25137429-25137448 None:intergenic 55.0%
TTGGGACCGAGAGAGCAAGA+AGG + Chr6:25136713-25136732 None:intergenic 55.0%
TTGTTGCAGCCTTCGCATCC+TGG + Chr6:25137704-25137723 None:intergenic 55.0%
!! CAGAGGGCACCTGGAATTTG+TGG - Chr6:25138388-25138407 MsG0680031712.01.T01:intron 55.0%
!! CGGTGGTGGTAGATTTTCGG+TGG + Chr6:25140805-25140824 None:intergenic 55.0%
!! GCTATGACGGTGCCACAAAG+CGG - Chr6:25138788-25138807 MsG0680031712.01.T01:intron 55.0%
!! GGTTTTTGGACTCGCCCCAA+TGG - Chr6:25138725-25138744 MsG0680031712.01.T01:intron 55.0%
CAACCAATCTGCACGCAGCG+AGG - Chr6:25137868-25137887 MsG0680031712.01.T01:intron 60.0%
CAGGCATTAGGTGCAGTGGC+TGG - Chr6:25136966-25136985 MsG0680031712.01.T01:intron 60.0%
CGAGTCCAAAAACCGCCACC+GGG + Chr6:25138719-25138738 None:intergenic 60.0%
CGCATCTGTCCAGGATGCGA+AGG - Chr6:25137692-25137711 MsG0680031712.01.T01:intron 60.0%
GAGTAAGCAGGTGCGAGTGG+CGG + Chr6:25138079-25138098 None:intergenic 60.0%
GCGAGTCCAAAAACCGCCAC+CGG + Chr6:25138720-25138739 None:intergenic 60.0%
GGTGAGGCAGTGGCACTACT+CGG + Chr6:25137654-25137673 None:intergenic 60.0%
TATCGAATATCGGCGCCCGG+TGG - Chr6:25138701-25138720 MsG0680031712.01.T01:intron 60.0%
! AGGTGCAGTGGCTGGTGCTA+AGG - Chr6:25136974-25136993 MsG0680031712.01.T01:intron 60.0%
CACAAAGCGGCCGGTATGGC+CGG - Chr6:25138801-25138820 MsG0680031712.01.T01:intron 65.0%
CCAGGTGCCCTCTGTGTTGG+AGG + Chr6:25138382-25138401 None:intergenic 65.0%
CTGCCTCGCTGCGTGCAGAT+TGG + Chr6:25137874-25137893 None:intergenic 65.0%
GTGCCACAAAGCGGCCGGTA+TGG - Chr6:25138797-25138816 MsG0680031712.01.T01:intron 65.0%
! CGAGTGGCGGCCAGTTTGCT+GGG + Chr6:25138066-25138085 None:intergenic 65.0%
! CGGCCGGTATGGCCGGATTT+TGG - Chr6:25138808-25138827 MsG0680031712.01.T01:intron 65.0%
!! CCTCCAACACAGAGGGCACC+TGG - Chr6:25138379-25138398 MsG0680031712.01.T01:intron 65.0%
!! GAGTGGCGGCCAGTTTGCTG+GGG + Chr6:25138065-25138084 None:intergenic 65.0%
!! TGACGGTGCCACAAAGCGGC+CGG - Chr6:25138792-25138811 MsG0680031712.01.T01:intron 65.0%
CGAATATCGGCGCCCGGTGG+CGG - Chr6:25138704-25138723 MsG0680031712.01.T01:intron 70.0%
GCGAGTGGCGGCCAGTTTGC+TGG + Chr6:25138067-25138086 None:intergenic 70.0%
! CGGCCATACCGGCCGCTTTG+TGG + Chr6:25138803-25138822 None:intergenic 70.0%
!! CGGCGCCCGGTGGCGGTTTT+TGG - Chr6:25138711-25138730 MsG0680031712.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 25135696 25141072 25135696 ID=MsG0680031712.01;Name=MsG0680031712.01
Chr6 mRNA 25135696 25141072 25135696 ID=MsG0680031712.01.T01;Parent=MsG0680031712.01;Name=MsG0680031712.01.T01;_AED=0.49;_eAED=0.54;_QI=81|0.25|0.4|1|1|1|5|0|318
Chr6 exon 25135696 25135827 25135696 ID=MsG0680031712.01.T01:exon:15465;Parent=MsG0680031712.01.T01
Chr6 exon 25136543 25136674 25136543 ID=MsG0680031712.01.T01:exon:15464;Parent=MsG0680031712.01.T01
Chr6 exon 25139527 25139799 25139527 ID=MsG0680031712.01.T01:exon:15463;Parent=MsG0680031712.01.T01
Chr6 exon 25140126 25140230 25140126 ID=MsG0680031712.01.T01:exon:15462;Parent=MsG0680031712.01.T01
Chr6 exon 25140677 25141072 25140677 ID=MsG0680031712.01.T01:exon:15461;Parent=MsG0680031712.01.T01
Chr6 five_prime_UTR 25140992 25141072 25140992 ID=MsG0680031712.01.T01:five_prime_utr;Parent=MsG0680031712.01.T01
Chr6 CDS 25140677 25140991 25140677 ID=MsG0680031712.01.T01:cds;Parent=MsG0680031712.01.T01
Chr6 CDS 25140126 25140230 25140126 ID=MsG0680031712.01.T01:cds;Parent=MsG0680031712.01.T01
Chr6 CDS 25139527 25139799 25139527 ID=MsG0680031712.01.T01:cds;Parent=MsG0680031712.01.T01
Chr6 CDS 25136543 25136674 25136543 ID=MsG0680031712.01.T01:cds;Parent=MsG0680031712.01.T01
Chr6 CDS 25135696 25135827 25135696 ID=MsG0680031712.01.T01:cds;Parent=MsG0680031712.01.T01
Gene Sequence

>MsG0680031712.01.T01

ATGGTGAATCCAACAAAAGCAGCAATAGGAGATTTTGTGTTGACTTTTACATGGATGTTTATATCTTCAACACTTGGATTAGTCACAACAGAAATTATGAAAGCTTTTGATCTTCAATTTGTGACATATAATGGTGTTAATTATCCATTTATTATAATTACAACATTGCTAATATTCATAATTATCTTTACTTTTACTGCCATTGGTAATGCTTTGGGTGGTGCAAGTTTCAACCCTACAGGAAATGCTTCTTTCTATGCTGCTGGTCTTGGTTCTGATACTCTTGTCTCTATGGCTATTCGTTTCCCTGCTCAGATACTCTTAAGTTATGTAGCACATACACTTATGATTGAAGGCGTGTTCGGTATCCGATACAGACACGTCAAAATTATTACTTTTGTCGGCATGTCTGGTGTTCGTGCATTAGGTGCAGTGGCTGGTGCTAAGGCAATTAAGGAATTAATACCACCAAAATATAGTCACATGATTGGAGGACCTGCTTTGAAGGTTGATTTGCATACTGGAGCTATTGCAGAAGGAGTGTTGACATTTTCAATCACTTTTGCTGTTCTCTTCATCTTGCTCAGAGGTCCTCGTAGTGAGTTCATGAAGACTTTGTTGATGTCCGTGTCGACCGTAGCTATGATTCTCATCGGTTCTGCTTACACCGGACCATCAATGAATCCTATCCTAGCATATGGTTGGGCATACTTAGACAACTGGCACCACACATGGGATCAATTTTATGTTTACTGGATTTGTCCATTCATTGGAGCAATACTTGCTGCTTGGATGTTTCGTGCTGTTTTCCCGCCACAACAAGTGGTACGTTTTGATGGACATTATGCACTTGTTAGACAACAACCCCTTAAAGGAAGGGTAAAACAAGGAAGACAACATGCAGGCGAAATAGAGGCTTGGACGCTCATAGAATTTAGTGTTGCTCATGTTTTATAA
Protein sequence

>MsG0680031712.01.T01

MVNPTKAAIGDFVLTFTWMFISSTLGLVTTEIMKAFDLQFVTYNGVNYPFIIITTLLIFIIIFTFTAIGNALGGASFNPTGNASFYAAGLGSDTLVSMAIRFPAQILLSYVAHTLMIEGVFGIRYRHVKIITFVGMSGVRALGAVAGAKAIKELIPPKYSHMIGGPALKVDLHTGAIAEGVLTFSITFAVLFILLRGPRSEFMKTLLMSVSTVAMILIGSAYTGPSMNPILAYGWAYLDNWHHTWDQFYVYWICPFIGAILAAWMFRAVFPPQQVVRFDGHYALVRQQPLKGRVKQGRQHAGEIEAWTLIEFSVAHVL*