AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038640.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038640.01.T01 MTR_7g059030 97.853 326 7 0 9 334 39 364 0.0 565
MsG0780038640.01.T01 MTR_3g095240 60.577 104 41 0 9 112 39 142 2.73e-38 137
MsG0780038640.01.T01 MTR_3g095250 59.615 104 42 0 9 112 39 142 3.34e-38 136
MsG0780038640.01.T01 MTR_3g095260 59.615 104 42 0 9 112 39 142 6.16e-38 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038640.01.T01 AT3G07030 58.683 167 61 3 9 170 39 202 1.16e-51 176
MsG0780038640.01.T01 AT3G07030 58.683 167 61 3 9 170 39 202 1.16e-51 176
MsG0780038640.01.T01 AT3G07030 58.683 167 61 3 9 170 39 202 1.38e-51 176
MsG0780038640.01.T01 AT3G07030 73.786 103 27 0 9 111 39 141 1.89e-48 169
MsG0780038640.01.T01 AT3G07030 73.786 103 27 0 9 111 39 141 4.14e-48 167
MsG0780038640.01.T01 AT1G20220 55.556 99 44 0 7 105 37 135 1.85e-32 123

Find 172 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTTCATGAAACTGATT+TGG 0.209849 7:-50298566 MsG0780038640.01.T01:three_prime_UTR
GGAGGCAGAGGTGGAGGATA+TGG 0.242926 7:-50298932 MsG0780038640.01.T01:CDS
ATCTGTATCTGGTTTCTATA+TGG 0.244819 7:-50298441 MsG0780038640.01.T01:three_prime_UTR
GGTGGCAGGGGTGGAGGTTA+TGG 0.269384 7:-50299001 MsG0780038640.01.T01:CDS
GGCAGGGGAGGCAGGGGATA+TGG 0.278931 7:-50298764 MsG0780038640.01.T01:CDS
CAGAGGTTGCTGCTGATAAT+TGG 0.289288 7:+50299872 None:intergenic
TAGAGGGAGAGGTAGGAATT+GGG 0.296049 7:-50299705 MsG0780038640.01.T01:CDS
GGAGGGTATGGTGGAGGCAG+AGG 0.303211 7:-50298944 MsG0780038640.01.T01:CDS
GGCAGAGGTGGAGGGTATGG+TGG 0.314076 7:-50298953 MsG0780038640.01.T01:CDS
TCTCTTCATGAAACTGATTT+GGG 0.337371 7:-50298565 MsG0780038640.01.T01:three_prime_UTR
GTAGAGGGAGAGGTAGGAAT+TGG 0.337973 7:-50299706 MsG0780038640.01.T01:CDS
GGAGGTCGAGGCAGAGGTTG+GGG 0.340331 7:-50299466 MsG0780038640.01.T01:CDS
AGGCAGAGGTGGAGGTGGTA+TGG 0.341830 7:-50298828 MsG0780038640.01.T01:CDS
GGGTATGGTGGAGGCAGAGG+TGG 0.347375 7:-50298941 MsG0780038640.01.T01:CDS
TTTGTAGGAGGCAGAGGTGG+AGG 0.350195 7:-50298836 MsG0780038640.01.T01:CDS
GGAGGCAGAGGTGGAGGAAT+GGG 0.351564 7:-50298860 MsG0780038640.01.T01:CDS
GGAGGATATGGAGGAGGCAG+AGG 0.356089 7:-50298920 MsG0780038640.01.T01:CDS
AGGGGATATGGCCGTGGTAG+GGG 0.356274 7:-50298752 MsG0780038640.01.T01:CDS
GGGAGGTCGAGGCAGAGGTT+GGG 0.358280 7:-50299467 MsG0780038640.01.T01:CDS
GGAGGTTATGGAGGCAGAGG+TGG 0.360488 7:-50298989 MsG0780038640.01.T01:CDS
ATGGTGTTGGCAACCATAAA+AGG 0.361711 7:+50298470 None:intergenic
GGAGGTTATGAAGGTGGCAG+GGG 0.362253 7:-50299013 MsG0780038640.01.T01:CDS
ATCTCAATCACCTTGTCAAC+TGG 0.366031 7:-50300130 MsG0780038640.01.T01:CDS
AGAGGTAGGAATTGGGGAAG+GGG 0.371584 7:-50299698 MsG0780038640.01.T01:CDS
GGCAGAGGTGGTGGTTATGA+AGG 0.375366 7:-50298905 MsG0780038640.01.T01:CDS
GGTTATGAAGGTGGCAGGGG+TGG 0.377101 7:-50299010 MsG0780038640.01.T01:CDS
GGTTATGGAGGCAGAGGTGG+AGG 0.378092 7:-50298986 MsG0780038640.01.T01:CDS
ATGAAAGAGGCAGGGGAGGC+AGG 0.389315 7:-50298772 MsG0780038640.01.T01:CDS
GGCAGAGGTGGAGGTTATGA+AGG 0.392200 7:-50298881 MsG0780038640.01.T01:CDS
GGTGGTTACGGTGGCGGCAG+AGG 0.397117 7:-50299109 MsG0780038640.01.T01:CDS
AATTGGGGAAGGGGTGGTTA+TGG 0.397399 7:-50299689 MsG0780038640.01.T01:CDS
TTTGATTGTTCAGCAGTAGA+TGG 0.398319 7:+50299903 None:intergenic
CAGGGGATATGGCCGTGGTA+GGG 0.401235 7:-50298753 MsG0780038640.01.T01:CDS
TATGAAGGTGGCAGGGGTGG+AGG 0.404403 7:-50299007 MsG0780038640.01.T01:CDS
TATGGTGGAGGCAGAGGTGG+AGG 0.406225 7:-50298938 MsG0780038640.01.T01:CDS
CGAGGTCGTGGTCGAGGTAG+AGG 0.410909 7:-50299722 MsG0780038640.01.T01:CDS
TACGGTGGCGGCAGAGGTGG+AGG 0.416974 7:-50299103 MsG0780038640.01.T01:CDS
TATGAAGGAGGCAGAGGTGG+AGG 0.418741 7:-50298866 MsG0780038640.01.T01:CDS
TATGGAGGAGGCAGAGGTGG+TGG 0.420030 7:-50298914 MsG0780038640.01.T01:CDS
TACGAAGGAGGCAGAGGTGG+AGG 0.420303 7:-50298962 MsG0780038640.01.T01:CDS
CGGTACAAGACCCTCTTCAA+TGG 0.422390 7:+50300275 None:intergenic
GGCAGAGGTGGAGGTGGTAT+GGG 0.422763 7:-50298827 MsG0780038640.01.T01:CDS
GGAGGTTATGAAGGAGGCAG+AGG 0.426160 7:-50298872 MsG0780038640.01.T01:CDS
GGGGAGGTCGAGGCAGAGGT+TGG 0.431992 7:-50299468 MsG0780038640.01.T01:CDS
GGTAGGAATTGGGGAAGGGG+TGG 0.434417 7:-50299695 MsG0780038640.01.T01:CDS
GGCAGGGGTGGAGGTTATGG+AGG 0.435134 7:-50298998 MsG0780038640.01.T01:CDS
GGAGGTTATGAAGGTGGTAG+AGG 0.437789 7:-50299085 MsG0780038640.01.T01:CDS
TATGAAGGTGGTAGAGGTGG+AGG 0.441657 7:-50299079 MsG0780038640.01.T01:CDS
GGAGGCAGAGGTGGAGGGTA+TGG 0.444048 7:-50298956 MsG0780038640.01.T01:CDS
TGACAAGGTGATTGAGATCA+TGG 0.445665 7:+50300135 None:intergenic
GGTTATGAAGGAGGCAGAGG+TGG 0.447746 7:-50298869 MsG0780038640.01.T01:CDS
GGTTACGGTGGCGGCAGAGG+TGG 0.448266 7:-50299106 MsG0780038640.01.T01:CDS
GGCAGAGGTGGAGGATATGG+AGG 0.452442 7:-50298929 MsG0780038640.01.T01:CDS
TATGAAGGAGGCAGAGGTGG+AGG 0.457131 7:-50298890 MsG0780038640.01.T01:CDS
AGAGGGAGAGGTAGGAATTG+GGG 0.457224 7:-50299704 MsG0780038640.01.T01:CDS
AGGAGGCAGAGGTGGAGGAA+TGG 0.458248 7:-50298861 MsG0780038640.01.T01:CDS
GAGGTCGAGGCAGAGGTTGG+GGG 0.460450 7:-50299465 MsG0780038640.01.T01:CDS
ACACCCATTGCTATCATGCC+TGG 0.462592 7:+50298693 None:intergenic
GGAAATTATCAAGGTGGATA+CGG 0.462645 7:-50299650 MsG0780038640.01.T01:CDS
AGAGGTGGAGGTGGTTATGA+AGG 0.463581 7:-50299067 MsG0780038640.01.T01:CDS
TGTTCATCTTTAGATTTAGC+TGG 0.463992 7:-50298534 MsG0780038640.01.T01:three_prime_UTR
TTGCAGTATCTTGGTGCAAA+GGG 0.465007 7:+50300331 None:intergenic
AGGAGGCAGAGGTGGAGGTA+TGG 0.467630 7:-50298798 MsG0780038640.01.T01:CDS
TATGGCTATCAAGGTGGGTA+TGG 0.468309 7:-50299671 MsG0780038640.01.T01:CDS
CTGAGCTGATTGCAGTATCT+TGG 0.471182 7:+50300322 None:intergenic
AGCAAAAGAGATTGTCTTGA+AGG 0.471497 7:-50300673 MsG0780038640.01.T01:CDS
GGTGGTTATGAAGGTGGCAG+AGG 0.471529 7:-50299058 MsG0780038640.01.T01:CDS
GCAGGGGATATGGCCGTGGT+AGG 0.471829 7:-50298754 MsG0780038640.01.T01:CDS
GACTCGTATGGCCGAGGTCG+TGG 0.474535 7:-50299734 MsG0780038640.01.T01:CDS
GGAGGGTACGAAGGAGGCAG+AGG 0.475761 7:-50298968 MsG0780038640.01.T01:CDS
GAGATTGTCTTGAAGGCAAT+GGG 0.476181 7:-50300666 MsG0780038640.01.T01:CDS
GTAGGAGGCAGAGGTGGAGG+TGG 0.476299 7:-50298833 MsG0780038640.01.T01:CDS
TGAAAGAGGCAGGGGAGGCA+GGG 0.477286 7:-50298771 MsG0780038640.01.T01:CDS
ATGGATGGACGTGGTGGTAG+AGG 0.477718 7:-50298725 MsG0780038640.01.T01:CDS
GGTTATGAAGGAGGCAGAGG+TGG 0.478456 7:-50298893 MsG0780038640.01.T01:CDS
GGAGGCAGAGGTGGAGGTAT+GGG 0.480716 7:-50298797 MsG0780038640.01.T01:CDS
GTGGAGGTTATGAAGGTGGC+AGG 0.481847 7:-50299015 MsG0780038640.01.T01:CDS
TCTTATAATGCTGTAAATGA+AGG 0.481848 7:-50299834 MsG0780038640.01.T01:intron
GGTGGTTATGAAGGAGGCAG+AGG 0.483538 7:-50298896 MsG0780038640.01.T01:CDS
GGAGGCAGGGGATATGGCCG+TGG 0.483577 7:-50298758 MsG0780038640.01.T01:CDS
GTATGGGTTATGAAAGAGGC+AGG 0.487261 7:-50298781 MsG0780038640.01.T01:CDS
AGAGGTGGAGGGTATGGTGG+AGG 0.489831 7:-50298950 MsG0780038640.01.T01:CDS
GAATTGAACACAAATTCTCC+TGG 0.491912 7:-50300106 MsG0780038640.01.T01:CDS
GGTCGTGGTGGAGGTTATGA+AGG 0.492926 7:-50299022 MsG0780038640.01.T01:CDS
TATGAAGGTGGTCGTGGTGG+AGG 0.494891 7:-50299031 MsG0780038640.01.T01:CDS
GGGTACGAAGGAGGCAGAGG+TGG 0.495025 7:-50298965 MsG0780038640.01.T01:CDS
GGGTATTCTAATCGTGGCCG+AGG 0.495644 7:-50299490 MsG0780038640.01.T01:CDS
GGATATGGAGGAGGCAGAGG+TGG 0.495944 7:-50298917 MsG0780038640.01.T01:CDS
TGGCCGTGGTAGGGGAAGAA+TGG 0.496897 7:-50298744 MsG0780038640.01.T01:CDS
TACGAAGGAGGCAGAGGTGG+AGG 0.500034 7:-50298803 MsG0780038640.01.T01:CDS
GGTTATGAAGGTGGTAGAGG+TGG 0.500241 7:-50299082 MsG0780038640.01.T01:CDS
GGTGGCAGAGGTGGCTATGA+AGG 0.502655 7:-50299046 MsG0780038640.01.T01:CDS
GATAATTTGCATATCCACCT+TGG 0.504702 7:+50299621 None:intergenic
GAAAGAGGCAGGGGAGGCAG+GGG 0.505244 7:-50298770 MsG0780038640.01.T01:CDS
GAGAGGTAGGAATTGGGGAA+GGG 0.510893 7:-50299699 MsG0780038640.01.T01:CDS
GGTGGATATGCAAATTATCA+AGG 0.512065 7:-50299617 MsG0780038640.01.T01:intron
TGGAGGTTATGAAGGTGGCA+GGG 0.512822 7:-50299014 MsG0780038640.01.T01:CDS
GGTGGAGGTTATGGAGGCAG+AGG 0.517048 7:-50298992 MsG0780038640.01.T01:CDS
GGCAGAGGTGGAGGTTATGA+AGG 0.517385 7:-50299094 MsG0780038640.01.T01:CDS
GGAGAGGTAGGAATTGGGGA+AGG 0.518873 7:-50299700 MsG0780038640.01.T01:CDS
AAATACAAAACGTTATAAGA+TGG 0.520685 7:+50300711 None:intergenic
GGTATTCTAATCGTGGCCGA+GGG 0.520710 7:-50299489 MsG0780038640.01.T01:CDS
TCATGAAACTGATTTGGGCA+AGG 0.522891 7:-50298560 MsG0780038640.01.T01:three_prime_UTR
GGAGGTATGGGTTATGAAAG+AGG 0.523038 7:-50298785 MsG0780038640.01.T01:CDS
CGTGGTCGAGGTAGAGGGAG+AGG 0.524222 7:-50299716 MsG0780038640.01.T01:CDS
AAACCAGGCATGATAGCAAT+GGG 0.524237 7:-50298696 MsG0780038640.01.T01:exon
GGTACAAGACCCTCTTCAAT+GGG 0.524827 7:+50300276 None:intergenic
GCATTATAAGAATCCTGTGC+TGG 0.525963 7:+50299846 None:intergenic
ATGGGTTACGAAGGAGGCAG+AGG 0.532052 7:-50298809 MsG0780038640.01.T01:CDS
GGTGGAGGTGGTTATGAAGG+TGG 0.535779 7:-50299064 MsG0780038640.01.T01:CDS
ATGGGTTATGAAAGAGGCAG+GGG 0.536952 7:-50298779 MsG0780038640.01.T01:CDS
TATGGCCGAGGTCGTGGTCG+AGG 0.538984 7:-50299728 MsG0780038640.01.T01:CDS
GAATCCTGTGCTGGTTTCAG+AGG 0.539391 7:+50299855 None:intergenic
GGTGGCTATGAAGGTGGTCG+TGG 0.541622 7:-50299037 MsG0780038640.01.T01:CDS
GATGGACGTGGTGGTAGAGG+TGG 0.541630 7:-50298722 MsG0780038640.01.T01:CDS
GGCTATGAAGGTGGTCGTGG+TGG 0.544263 7:-50299034 MsG0780038640.01.T01:CDS
GGCAGAGGTGGAGGGTACGA+AGG 0.546349 7:-50298977 MsG0780038640.01.T01:CDS
AGGGGTGGTTATGGCTATCA+AGG 0.547547 7:-50299680 MsG0780038640.01.T01:CDS
ATAACATAACTGCACTGTCA+AGG 0.550539 7:+50298644 None:intergenic
AGAGATTGTCTTGAAGGCAA+TGG 0.551588 7:-50300667 MsG0780038640.01.T01:CDS
GGTGGGTATGGAAATTATCA+AGG 0.557168 7:-50299659 MsG0780038640.01.T01:CDS
TAACATAACTGCACTGTCAA+GGG 0.561421 7:+50298645 None:intergenic
GGTTACGAAGGAGGCAGAGG+TGG 0.561639 7:-50298806 MsG0780038640.01.T01:CDS
CGTGGTAGGGGAAGAATGGA+TGG 0.561990 7:-50298740 MsG0780038640.01.T01:CDS
TTTCTAGACTCGTATGGCCG+AGG 0.563458 7:-50299740 MsG0780038640.01.T01:intron
GTCGAGGTAGAGGGAGAGGT+AGG 0.564538 7:-50299712 MsG0780038640.01.T01:CDS
GGTTATGAAGGTGGCAGAGG+TGG 0.565556 7:-50299055 MsG0780038640.01.T01:CDS
AGAGGTGGAGGGTACGAAGG+AGG 0.566762 7:-50298974 MsG0780038640.01.T01:CDS
TGATAGTATGATGTTGCTCA+TGG 0.567858 7:-50298608 MsG0780038640.01.T01:three_prime_UTR
TGGTAGAGGTGGAGAAAACC+AGG 0.569362 7:-50298711 MsG0780038640.01.T01:CDS
GAAGGTGGTAGAGGTGGAGG+TGG 0.574900 7:-50299076 MsG0780038640.01.T01:CDS
ATTGCAGTATCTTGGTGCAA+AGG 0.575004 7:+50300330 None:intergenic
GGTGGTATGGGTTACGAAGG+AGG 0.575326 7:-50298815 MsG0780038640.01.T01:CDS
AAAACCAGGCATGATAGCAA+TGG 0.579456 7:-50298697 MsG0780038640.01.T01:exon
TACCTTCAGAATCTCTGCAA+TGG 0.580155 7:+50300620 None:intergenic
ACGAAGGAGGCAGAGGTGGA+GGG 0.581836 7:-50298961 MsG0780038640.01.T01:CDS
GTGGTTATGGCTATCAAGGT+GGG 0.583212 7:-50299676 MsG0780038640.01.T01:CDS
AGTTAGCATAACAGATGTGT+GGG 0.583306 7:-50300301 MsG0780038640.01.T01:CDS
GTTCAATTCTCCAGTTGACA+AGG 0.584863 7:+50300120 None:intergenic
GGTTATGAAAGAGGCAGGGG+AGG 0.585553 7:-50298776 MsG0780038640.01.T01:CDS
AGAGGTGGAGGATATGGAGG+AGG 0.586063 7:-50298926 MsG0780038640.01.T01:CDS
TATGGGTTATGAAAGAGGCA+GGG 0.586895 7:-50298780 MsG0780038640.01.T01:CDS
GAGGTCGTGGTCGAGGTAGA+GGG 0.588127 7:-50299721 MsG0780038640.01.T01:CDS
TGCTGCTGATAATTGGAGTG+TGG 0.589124 7:+50299879 None:intergenic
CTCTACCTCGACCACGACCT+CGG 0.592109 7:+50299723 None:intergenic
GGAAGAATGGATGGACGTGG+TGG 0.593817 7:-50298731 MsG0780038640.01.T01:CDS
GTGTGGGAGCCCATTGAAGA+GGG 0.607655 7:-50300285 MsG0780038640.01.T01:CDS
CGTGGTGGAGGTTATGAAGG+TGG 0.609599 7:-50299019 MsG0780038640.01.T01:CDS
CAGTTAGCATAACAGATGTG+TGG 0.612311 7:-50300302 MsG0780038640.01.T01:CDS
GGTGGATACGGCTATTACCA+AGG 0.612843 7:-50299638 MsG0780038640.01.T01:CDS
AGAGGTGGTGGTTATGAAGG+AGG 0.614413 7:-50298902 MsG0780038640.01.T01:CDS
GGAGGTGGTATGGGTTACGA+AGG 0.614581 7:-50298818 MsG0780038640.01.T01:CDS
GGTGGTTATGGCTATCAAGG+TGG 0.617759 7:-50299677 MsG0780038640.01.T01:CDS
AATTGAACACAAATTCTCCT+GGG 0.623115 7:-50300105 MsG0780038640.01.T01:intron
TGTGTGGGAGCCCATTGAAG+AGG 0.624055 7:-50300286 MsG0780038640.01.T01:CDS
TGCCATTGCAGAGATTCTGA+AGG 0.625612 7:-50300622 MsG0780038640.01.T01:intron
GGCAGAGGTGGCTATGAAGG+TGG 0.627200 7:-50299043 MsG0780038640.01.T01:CDS
GGTTCCTGACAGATAATGGT+GGG 0.628649 7:-50299510 MsG0780038640.01.T01:intron
CATCCATTCTTCCCCTACCA+CGG 0.628907 7:+50298741 None:intergenic
GTTATGGAGGCAGAGGTGGA+GGG 0.630921 7:-50298985 MsG0780038640.01.T01:CDS
AGAGGTGGAGGTTATGAAGG+AGG 0.632338 7:-50298878 MsG0780038640.01.T01:CDS
GCAACCTCTGAAACCAGCAC+AGG 0.640267 7:-50299859 MsG0780038640.01.T01:CDS
AGAGGTGGAGGTTATGAAGG+TGG 0.648731 7:-50299091 MsG0780038640.01.T01:CDS
GGGTATGGAAATTATCAAGG+TGG 0.649199 7:-50299656 MsG0780038640.01.T01:CDS
AGGGGAAGAATGGATGGACG+TGG 0.649748 7:-50298734 MsG0780038640.01.T01:CDS
GTATTCTAATCGTGGCCGAG+GGG 0.653433 7:-50299488 MsG0780038640.01.T01:CDS
TATTCTAATCGTGGCCGAGG+GGG 0.657347 7:-50299487 MsG0780038640.01.T01:CDS
AATGGTGGGTATTCTAATCG+TGG 0.658725 7:-50299496 MsG0780038640.01.T01:CDS
ATTGCAGTGTGGAAATGACT+CGG 0.663461 7:-50300165 MsG0780038640.01.T01:intron
TGCAGTATCTTGGTGCAAAG+GGG 0.673020 7:+50300332 None:intergenic
TGGTTCCTGACAGATAATGG+TGG 0.678431 7:-50299511 MsG0780038640.01.T01:intron
GGATACGGCTATTACCAAGG+TGG 0.753958 7:-50299635 MsG0780038640.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTAAAGAACATATA+AGG + Chr7:50298550-50298569 None:intergenic 10.0%
!!! CATAATTTTTTTTTCTATTT+GGG - Chr7:50298900-50298919 MsG0780038640.01.T01:CDS 10.0%
!! AAAATTTCAAACAAAACTTA+CGG + Chr7:50298863-50298882 None:intergenic 15.0%
!! AGAATAAAAAACTTAAAATC+TGG - Chr7:50298686-50298705 MsG0780038640.01.T01:three_prime_UTR 15.0%
!! CCAAATAGAAAAAAAAATTA+TGG + Chr7:50298902-50298921 None:intergenic 15.0%
!! TATATTAGCTATTCATTAAT+AGG - Chr7:50299321-50299340 MsG0780038640.01.T01:intron 15.0%
!!! AAAGAAAGTATAGATATAAT+AGG + Chr7:50299827-50299846 None:intergenic 15.0%
!!! AAGTTTTTTATTCTAACTTT+TGG + Chr7:50298680-50298699 None:intergenic 15.0%
!!! CCATAATTTTTTTTTCTATT+TGG - Chr7:50298899-50298918 MsG0780038640.01.T01:CDS 15.0%
!!! TCAAATTTTTCACATTTTTA+AGG - Chr7:50299985-50300004 MsG0780038640.01.T01:intron 15.0%
!! AAATACAAAACGTTATAAGA+TGG + Chr7:50298407-50298426 None:intergenic 20.0%
!! AAATTAAAGAACATATAAGG+AGG + Chr7:50298547-50298566 None:intergenic 20.0%
!! CAAGATCATGAAAATAATTA+CGG + Chr7:50299042-50299061 None:intergenic 20.0%
!! GAGAAAAAAAACATAAATGA+TGG + Chr7:50300534-50300553 None:intergenic 20.0%
!! TTCATTATCATCAGATAATA+CGG + Chr7:50299712-50299731 None:intergenic 20.0%
!!! AATTTTTCACATTTTTAAGG+TGG - Chr7:50299988-50300007 MsG0780038640.01.T01:intron 20.0%
!!! AATTTTTTTTTCTATTTGGG+TGG - Chr7:50298903-50298922 MsG0780038640.01.T01:CDS 20.0%
! AACCTTTAGATTTATTGAAG+AGG + Chr7:50298655-50298674 None:intergenic 25.0%
! AACTTGAAAATAATTGGCAA+TGG - Chr7:50298608-50298627 MsG0780038640.01.T01:three_prime_UTR 25.0%
! ACCAGATACAGATAAAAATA+TGG + Chr7:50300667-50300686 None:intergenic 25.0%
! ACCTTTAGATTTATTGAAGA+GGG + Chr7:50298654-50298673 None:intergenic 25.0%
! ATTGTTGATATTCAACAACT+TGG + Chr7:50298929-50298948 None:intergenic 25.0%
! GAAGGTAACTTGAAAATAAT+TGG - Chr7:50298602-50298621 MsG0780038640.01.T01:three_prime_UTR 25.0%
! GTCTATATGATTTCATGTTT+AGG - Chr7:50299180-50299199 MsG0780038640.01.T01:intron 25.0%
! TACAGATAAAAATATGGTGT+TGG + Chr7:50300661-50300680 None:intergenic 25.0%
! TCATTATCATCAGATAATAC+GGG + Chr7:50299711-50299730 None:intergenic 25.0%
! TCTTATAATGCTGTAAATGA+AGG - Chr7:50299281-50299300 MsG0780038640.01.T01:intron 25.0%
!! AGTTTTCCATATTTGATTGA+TGG + Chr7:50299913-50299932 None:intergenic 25.0%
!! CTATACTTTCTTTTCTATTC+TGG - Chr7:50299834-50299853 MsG0780038640.01.T01:intron 25.0%
!! GTAATTCATTACACCTTTTA+TGG - Chr7:50300632-50300651 MsG0780038640.01.T01:CDS 25.0%
!! TTACGTTCTTTTTATTCAGT+TGG - Chr7:50299063-50299082 MsG0780038640.01.T01:CDS 25.0%
!!! AACTGTTTTTGTATTTGTGA+AGG - Chr7:50299929-50299948 MsG0780038640.01.T01:intron 25.0%
!!! ACCATATTTTTATCTGTATC+TGG - Chr7:50300663-50300682 MsG0780038640.01.T01:CDS 25.0%
!!! TCATATTGATTTTCTGTGAT+TGG - Chr7:50298730-50298749 MsG0780038640.01.T01:CDS 25.0%
!!! TGTTTGAAATTTTAACGTTC+TGG - Chr7:50298870-50298889 MsG0780038640.01.T01:CDS 25.0%
!!! TTATATTTTGAATCCATTCC+TGG - Chr7:50299134-50299153 MsG0780038640.01.T01:intron 25.0%
AAATACTAGTCAAACAATCC+AGG + Chr7:50299155-50299174 None:intergenic 30.0%
AATTGAACACAAATTCTCCT+GGG - Chr7:50299010-50299029 MsG0780038640.01.T01:CDS 30.0%
AGATGTGCTAAAAGTTAGAA+TGG + Chr7:50299347-50299366 None:intergenic 30.0%
GCTTATGATCAGATTAAACA+TGG + Chr7:50299959-50299978 None:intergenic 30.0%
GTACTATAATGCTAAAATCC+AGG + Chr7:50299538-50299557 None:intergenic 30.0%
TATCAACAATTATTGCAGTG+TGG - Chr7:50298939-50298958 MsG0780038640.01.T01:CDS 30.0%
TATGCTCCATCAATCAAATA+TGG - Chr7:50299904-50299923 MsG0780038640.01.T01:CDS 30.0%
TCCCTCTTCAATAAATCTAA+AGG - Chr7:50298650-50298669 MsG0780038640.01.T01:three_prime_UTR 30.0%
TGTTCATCTTTAGATTTAGC+TGG - Chr7:50300581-50300600 MsG0780038640.01.T01:intron 30.0%
TTCTCTTCATGAAACTGATT+TGG - Chr7:50300549-50300568 MsG0780038640.01.T01:intron 30.0%
! ATCTGTATCTGGTTTCTATA+TGG - Chr7:50300674-50300693 MsG0780038640.01.T01:CDS 30.0%
! TAACGTTTTGTATTTCATCC+AGG - Chr7:50298412-50298431 MsG0780038640.01.T01:three_prime_UTR 30.0%
! TACTTTCTTTTCTATTCTGG+AGG - Chr7:50299837-50299856 MsG0780038640.01.T01:CDS 30.0%
! TATCTTTTTCTAGACTCGTA+TGG - Chr7:50299369-50299388 MsG0780038640.01.T01:intron 30.0%
! TCTCTTCATGAAACTGATTT+GGG - Chr7:50300550-50300569 MsG0780038640.01.T01:intron 30.0%
! TCTTGTTATAACAGCTTCTT+GGG - Chr7:50299092-50299111 MsG0780038640.01.T01:CDS 30.0%
! TGATGATAATGAATGTCTTC+AGG - Chr7:50299719-50299738 MsG0780038640.01.T01:CDS 30.0%
! TTCTTGTTATAACAGCTTCT+TGG - Chr7:50299091-50299110 MsG0780038640.01.T01:CDS 30.0%
!! AAGTTTACTTTTGTTGTGCT+TGG - Chr7:50299584-50299603 MsG0780038640.01.T01:intron 30.0%
!!! TCACATTTTTAAGGTGGTTA+CGG - Chr7:50299994-50300013 MsG0780038640.01.T01:intron 30.0%
AAGGTACAAATTCTGAATCC+TGG - Chr7:50299517-50299536 MsG0780038640.01.T01:intron 35.0%
AGCAAAAGAGATTGTCTTGA+AGG - Chr7:50298442-50298461 MsG0780038640.01.T01:three_prime_UTR 35.0%
AGTTAGCATAACAGATGTGT+GGG - Chr7:50298814-50298833 MsG0780038640.01.T01:CDS 35.0%
ATAAACTCAGGAAACCATCT+TGG + Chr7:50299764-50299783 None:intergenic 35.0%
ATAACATAACTGCACTGTCA+AGG + Chr7:50300474-50300493 None:intergenic 35.0%
GAATTGAACACAAATTCTCC+TGG - Chr7:50299009-50299028 MsG0780038640.01.T01:CDS 35.0%
GGAAATTATCAAGGTGGATA+CGG - Chr7:50299465-50299484 MsG0780038640.01.T01:CDS 35.0%
GGTGGATATGCAAATTATCA+AGG - Chr7:50299498-50299517 MsG0780038640.01.T01:CDS 35.0%
TAACATAACTGCACTGTCAA+GGG + Chr7:50300473-50300492 None:intergenic 35.0%
TCAATCTGCTTAAACAGAAG+AGG - Chr7:50298756-50298775 MsG0780038640.01.T01:CDS 35.0%
TCTGAAGGTAATTTCTTTGC+AGG - Chr7:50298508-50298527 MsG0780038640.01.T01:three_prime_UTR 35.0%
TGATAGTATGATGTTGCTCA+TGG - Chr7:50300507-50300526 MsG0780038640.01.T01:intron 35.0%
TTATCATCAGATAATACGGG+AGG + Chr7:50299708-50299727 None:intergenic 35.0%
TTTGATTGTTCAGCAGTAGA+TGG + Chr7:50299215-50299234 None:intergenic 35.0%
! CTTGTTATAACAGCTTCTTG+GGG - Chr7:50299093-50299112 MsG0780038640.01.T01:CDS 35.0%
! GATAATTTGCATATCCACCT+TGG + Chr7:50299497-50299516 None:intergenic 35.0%
!! TAGCATATGTTTCTGGTAGA+AGG - Chr7:50298584-50298603 MsG0780038640.01.T01:three_prime_UTR 35.0%
!! TTAGCTGGAAAAAGCATCTT+TGG - Chr7:50300596-50300615 MsG0780038640.01.T01:intron 35.0%
AAAACCAGGCATGATAGCAA+TGG - Chr7:50300418-50300437 MsG0780038640.01.T01:intron 40.0%
AAACCAGGCATGATAGCAAT+GGG - Chr7:50300419-50300438 MsG0780038640.01.T01:intron 40.0%
AATAATTACGGAACTCACCC+AGG + Chr7:50299030-50299049 None:intergenic 40.0%
AATACCCACCATTATCTGTC+AGG + Chr7:50299612-50299631 None:intergenic 40.0%
AGAGATTGTCTTGAAGGCAA+TGG - Chr7:50298448-50298467 MsG0780038640.01.T01:three_prime_UTR 40.0%
ATCTCAATCACCTTGTCAAC+TGG - Chr7:50298985-50299004 MsG0780038640.01.T01:CDS 40.0%
ATTGCAGTGTGGAAATGACT+CGG - Chr7:50298950-50298969 MsG0780038640.01.T01:CDS 40.0%
CAGTTAGCATAACAGATGTG+TGG - Chr7:50298813-50298832 MsG0780038640.01.T01:CDS 40.0%
CTAGTCAAACAATCCAGGAA+TGG + Chr7:50299150-50299169 None:intergenic 40.0%
GACAGTCTAGCATATGTTTC+TGG - Chr7:50298577-50298596 MsG0780038640.01.T01:three_prime_UTR 40.0%
GAGATTGTCTTGAAGGCAAT+GGG - Chr7:50298449-50298468 MsG0780038640.01.T01:three_prime_UTR 40.0%
GCATTATAAGAATCCTGTGC+TGG + Chr7:50299272-50299291 None:intergenic 40.0%
GGGTATGGAAATTATCAAGG+TGG - Chr7:50299459-50299478 MsG0780038640.01.T01:CDS 40.0%
GGTGGGTATGGAAATTATCA+AGG - Chr7:50299456-50299475 MsG0780038640.01.T01:intron 40.0%
GTTCAATTCTCCAGTTGACA+AGG + Chr7:50298998-50299017 None:intergenic 40.0%
TACCTTCAGAATCTCTGCAA+TGG + Chr7:50298498-50298517 None:intergenic 40.0%
TGACAAGGTGATTGAGATCA+TGG + Chr7:50298983-50299002 None:intergenic 40.0%
TGGGGAGGGAAAAAAATTGA+AGG - Chr7:50299111-50299130 MsG0780038640.01.T01:CDS 40.0%
TTATAACAGCTTCTTGGGGA+GGG - Chr7:50299097-50299116 MsG0780038640.01.T01:CDS 40.0%
! ACAGATGAGAGCATAAACTC+AGG + Chr7:50299776-50299795 None:intergenic 40.0%
! ATTGCAGTATCTTGGTGCAA+AGG + Chr7:50298788-50298807 None:intergenic 40.0%
! TATGGGTTATGAAAGAGGCA+GGG - Chr7:50300335-50300354 MsG0780038640.01.T01:CDS 40.0%
! TTGCAGTATCTTGGTGCAAA+GGG + Chr7:50298787-50298806 None:intergenic 40.0%
!! AATGGTGGGTATTCTAATCG+TGG - Chr7:50299619-50299638 MsG0780038640.01.T01:CDS 40.0%
!! ATGGTGTTGGCAACCATAAA+AGG + Chr7:50300648-50300667 None:intergenic 40.0%
!! CTCTGTCTTTTTCACCAAGA+TGG - Chr7:50299747-50299766 MsG0780038640.01.T01:intron 40.0%
!! TCATGAAACTGATTTGGGCA+AGG - Chr7:50300555-50300574 MsG0780038640.01.T01:intron 40.0%
!! TCTCTTTTGCTTGCTTTTCC+TGG + Chr7:50298433-50298452 None:intergenic 40.0%
!!! CATTTTTAAGGTGGTTACGG+TGG - Chr7:50299997-50300016 MsG0780038640.01.T01:intron 40.0%
CAGAGGTTGCTGCTGATAAT+TGG + Chr7:50299246-50299265 None:intergenic 45.0%
CTGAGCTGATTGCAGTATCT+TGG + Chr7:50298796-50298815 None:intergenic 45.0%
GCTTGGTTCCTGACAGATAA+TGG - Chr7:50299601-50299620 MsG0780038640.01.T01:intron 45.0%
GGTACAAGACCCTCTTCAAT+GGG + Chr7:50298842-50298861 None:intergenic 45.0%
GTGGTTATGGCTATCAAGGT+GGG - Chr7:50299439-50299458 MsG0780038640.01.T01:intron 45.0%
GTTATAACAGCTTCTTGGGG+AGG - Chr7:50299096-50299115 MsG0780038640.01.T01:CDS 45.0%
TAGAGGGAGAGGTAGGAATT+GGG - Chr7:50299410-50299429 MsG0780038640.01.T01:intron 45.0%
TATGGCTATCAAGGTGGGTA+TGG - Chr7:50299444-50299463 MsG0780038640.01.T01:intron 45.0%
TGCCATTGCAGAGATTCTGA+AGG - Chr7:50298493-50298512 MsG0780038640.01.T01:three_prime_UTR 45.0%
TGCTGCTGATAATTGGAGTG+TGG + Chr7:50299239-50299258 None:intergenic 45.0%
! ATGGGTTATGAAAGAGGCAG+GGG - Chr7:50300336-50300355 MsG0780038640.01.T01:CDS 45.0%
! GGAGGTATGGGTTATGAAAG+AGG - Chr7:50300330-50300349 MsG0780038640.01.T01:CDS 45.0%
! GGTTCCTGACAGATAATGGT+GGG - Chr7:50299605-50299624 MsG0780038640.01.T01:intron 45.0%
! GTATGGGTTATGAAAGAGGC+AGG - Chr7:50300334-50300353 MsG0780038640.01.T01:CDS 45.0%
! TGCAGTATCTTGGTGCAAAG+GGG + Chr7:50298786-50298805 None:intergenic 45.0%
! TGGTTCCTGACAGATAATGG+TGG - Chr7:50299604-50299623 MsG0780038640.01.T01:intron 45.0%
!!! TTTTAAGGTGGTTACGGTGG+CGG - Chr7:50300000-50300019 MsG0780038640.01.T01:intron 45.0%
AATTGGGGAAGGGGTGGTTA+TGG - Chr7:50299426-50299445 MsG0780038640.01.T01:intron 50.0%
ACACCCATTGCTATCATGCC+TGG + Chr7:50300425-50300444 None:intergenic 50.0%
AGAGGGAGAGGTAGGAATTG+GGG - Chr7:50299411-50299430 MsG0780038640.01.T01:intron 50.0%
AGAGGTAGGAATTGGGGAAG+GGG - Chr7:50299417-50299436 MsG0780038640.01.T01:intron 50.0%
AGAGGTGGAGGTGGTTATGA+AGG - Chr7:50300048-50300067 MsG0780038640.01.T01:intron 50.0%
AGAGGTGGAGGTTATGAAGG+AGG - Chr7:50300024-50300043 MsG0780038640.01.T01:intron 50.0%
AGAGGTGGAGGTTATGAAGG+TGG - Chr7:50300024-50300043 MsG0780038640.01.T01:intron 50.0%
AGGGGTGGTTATGGCTATCA+AGG - Chr7:50299435-50299454 MsG0780038640.01.T01:intron 50.0%
CATCCATTCTTCCCCTACCA+CGG + Chr7:50300377-50300396 None:intergenic 50.0%
CGGTACAAGACCCTCTTCAA+TGG + Chr7:50298843-50298862 None:intergenic 50.0%
GAGAGGTAGGAATTGGGGAA+GGG - Chr7:50299416-50299435 MsG0780038640.01.T01:intron 50.0%
GGAGGTTATGAAGGTGGTAG+AGG - Chr7:50300030-50300049 MsG0780038640.01.T01:intron 50.0%
GGATACGGCTATTACCAAGG+TGG - Chr7:50299480-50299499 MsG0780038640.01.T01:CDS 50.0%
GGTATTCTAATCGTGGCCGA+GGG - Chr7:50299626-50299645 MsG0780038640.01.T01:CDS 50.0%
GGTGGATACGGCTATTACCA+AGG - Chr7:50299477-50299496 MsG0780038640.01.T01:CDS 50.0%
GGTGGTTATGGCTATCAAGG+TGG - Chr7:50299438-50299457 MsG0780038640.01.T01:intron 50.0%
GGTTATGAAGGTGGTAGAGG+TGG - Chr7:50300033-50300052 MsG0780038640.01.T01:intron 50.0%
GTAGAGGGAGAGGTAGGAAT+TGG - Chr7:50299409-50299428 MsG0780038640.01.T01:intron 50.0%
GTATTCTAATCGTGGCCGAG+GGG - Chr7:50299627-50299646 MsG0780038640.01.T01:CDS 50.0%
TATGAAGGTGGTAGAGGTGG+AGG - Chr7:50300036-50300055 MsG0780038640.01.T01:intron 50.0%
TATTCTAATCGTGGCCGAGG+GGG - Chr7:50299628-50299647 MsG0780038640.01.T01:CDS 50.0%
TGGAGGTTATGAAGGTGGCA+GGG - Chr7:50300101-50300120 MsG0780038640.01.T01:intron 50.0%
TGGTAGAGGTGGAGAAAACC+AGG - Chr7:50300404-50300423 MsG0780038640.01.T01:intron 50.0%
TTTCTAGACTCGTATGGCCG+AGG - Chr7:50299375-50299394 MsG0780038640.01.T01:intron 50.0%
! AGAGGTGGTGGTTATGAAGG+AGG - Chr7:50300213-50300232 MsG0780038640.01.T01:intron 50.0%
!! ATGGGTTTTGTAGGAGGCAG+AGG - Chr7:50300273-50300292 MsG0780038640.01.T01:intron 50.0%
!! GAATCCTGTGCTGGTTTCAG+AGG + Chr7:50299263-50299282 None:intergenic 50.0%
!! GGAGGAATGGGTTTTGTAGG+AGG - Chr7:50300267-50300286 MsG0780038640.01.T01:intron 50.0%
!! GGTGGAGGAATGGGTTTTGT+AGG - Chr7:50300264-50300283 MsG0780038640.01.T01:intron 50.0%
AGAGGTGGAGGATATGGAGG+AGG - Chr7:50300189-50300208 MsG0780038640.01.T01:intron 55.0%
AGGGGAAGAATGGATGGACG+TGG - Chr7:50300381-50300400 MsG0780038640.01.T01:intron 55.0%
ATGGATGGACGTGGTGGTAG+AGG - Chr7:50300390-50300409 MsG0780038640.01.T01:intron 55.0%
CGTGGTAGGGGAAGAATGGA+TGG - Chr7:50300375-50300394 MsG0780038640.01.T01:intron 55.0%
GGAAGAATGGATGGACGTGG+TGG - Chr7:50300384-50300403 MsG0780038640.01.T01:intron 55.0%
GGAGAGGTAGGAATTGGGGA+AGG - Chr7:50299415-50299434 MsG0780038640.01.T01:intron 55.0%
GGAGGTTATGAAGGAGGCAG+AGG - Chr7:50300243-50300262 MsG0780038640.01.T01:intron 55.0%
GGAGGTTATGAAGGTGGCAG+GGG - Chr7:50300102-50300121 MsG0780038640.01.T01:intron 55.0%
GGCAGAGGTGGAGGTTATGA+AGG - Chr7:50300021-50300040 MsG0780038640.01.T01:intron 55.0%
GGGTATTCTAATCGTGGCCG+AGG - Chr7:50299625-50299644 MsG0780038640.01.T01:CDS 55.0%
GGTGGAGGTGGTTATGAAGG+TGG - Chr7:50300051-50300070 MsG0780038640.01.T01:intron 55.0%
GGTGGTTATGAAGGAGGCAG+AGG - Chr7:50300219-50300238 MsG0780038640.01.T01:intron 55.0%
GGTGGTTATGAAGGTGGCAG+AGG - Chr7:50300057-50300076 MsG0780038640.01.T01:intron 55.0%
GGTTATGAAAGAGGCAGGGG+AGG - Chr7:50300339-50300358 MsG0780038640.01.T01:CDS 55.0%
GGTTATGAAGGAGGCAGAGG+TGG - Chr7:50300222-50300241 MsG0780038640.01.T01:intron 55.0%
GGTTATGAAGGTGGCAGAGG+TGG - Chr7:50300060-50300079 MsG0780038640.01.T01:intron 55.0%
GTGGAGGTTATGAAGGTGGC+AGG - Chr7:50300100-50300119 MsG0780038640.01.T01:intron 55.0%
GTGTGGGAGCCCATTGAAGA+GGG - Chr7:50298830-50298849 MsG0780038640.01.T01:CDS 55.0%
GTTATGGAGGCAGAGGTGGA+GGG - Chr7:50300130-50300149 MsG0780038640.01.T01:CDS 55.0%
TATGAAGGAGGCAGAGGTGG+AGG - Chr7:50300225-50300244 MsG0780038640.01.T01:intron 55.0%
TATGAAGGTGGTCGTGGTGG+AGG - Chr7:50300084-50300103 MsG0780038640.01.T01:intron 55.0%
TGTGTGGGAGCCCATTGAAG+AGG - Chr7:50298829-50298848 MsG0780038640.01.T01:CDS 55.0%
TTTGTAGGAGGCAGAGGTGG+AGG - Chr7:50300279-50300298 MsG0780038640.01.T01:CDS 55.0%
! ATGGGTTACGAAGGAGGCAG+AGG - Chr7:50300306-50300325 MsG0780038640.01.T01:CDS 55.0%
! CGTGGTGGAGGTTATGAAGG+TGG - Chr7:50300096-50300115 MsG0780038640.01.T01:intron 55.0%
! GGAGGTGGTATGGGTTACGA+AGG - Chr7:50300297-50300316 MsG0780038640.01.T01:CDS 55.0%
! GGCAGAGGTGGTGGTTATGA+AGG - Chr7:50300210-50300229 MsG0780038640.01.T01:intron 55.0%
! GGTCGTGGTGGAGGTTATGA+AGG - Chr7:50300093-50300112 MsG0780038640.01.T01:intron 55.0%
! GGTGGTATGGGTTACGAAGG+AGG - Chr7:50300300-50300319 MsG0780038640.01.T01:CDS 55.0%
!! GCAACCTCTGAAACCAGCAC+AGG - Chr7:50299256-50299275 MsG0780038640.01.T01:intron 55.0%
!! GGTTTTGTAGGAGGCAGAGG+TGG - Chr7:50300276-50300295 MsG0780038640.01.T01:CDS 55.0%
ACGAAGGAGGCAGAGGTGGA+GGG - Chr7:50300154-50300173 MsG0780038640.01.T01:CDS 60.0%
AGGAGGCAGAGGTGGAGGAA+TGG - Chr7:50300254-50300273 MsG0780038640.01.T01:intron 60.0%
AGGAGGCAGAGGTGGAGGTA+TGG - Chr7:50300317-50300336 MsG0780038640.01.T01:CDS 60.0%
AGGCAGAGGTGGAGGTGGTA+TGG - Chr7:50300287-50300306 MsG0780038640.01.T01:CDS 60.0%
AGGGGATATGGCCGTGGTAG+GGG - Chr7:50300363-50300382 MsG0780038640.01.T01:intron 60.0%
ATGAAAGAGGCAGGGGAGGC+AGG - Chr7:50300343-50300362 MsG0780038640.01.T01:CDS 60.0%
CAGGGGATATGGCCGTGGTA+GGG - Chr7:50300362-50300381 MsG0780038640.01.T01:intron 60.0%
CTCTACCTCGACCACGACCT+CGG + Chr7:50299395-50299414 None:intergenic 60.0%
GAAGGTGGTAGAGGTGGAGG+TGG - Chr7:50300039-50300058 MsG0780038640.01.T01:intron 60.0%
GAGGTCGTGGTCGAGGTAGA+GGG - Chr7:50299394-50299413 MsG0780038640.01.T01:intron 60.0%
GATGGACGTGGTGGTAGAGG+TGG - Chr7:50300393-50300412 MsG0780038640.01.T01:intron 60.0%
GGAGGATATGGAGGAGGCAG+AGG - Chr7:50300195-50300214 MsG0780038640.01.T01:intron 60.0%
GGAGGCAGAGGTGGAGGAAT+GGG - Chr7:50300255-50300274 MsG0780038640.01.T01:intron 60.0%
GGAGGCAGAGGTGGAGGATA+TGG - Chr7:50300183-50300202 MsG0780038640.01.T01:intron 60.0%
GGAGGTTATGGAGGCAGAGG+TGG - Chr7:50300126-50300145 MsG0780038640.01.T01:CDS 60.0%
GGATATGGAGGAGGCAGAGG+TGG - Chr7:50300198-50300217 MsG0780038640.01.T01:intron 60.0%
GGCAGAGGTGGAGGATATGG+AGG - Chr7:50300186-50300205 MsG0780038640.01.T01:intron 60.0%
GGCAGAGGTGGAGGTGGTAT+GGG - Chr7:50300288-50300307 MsG0780038640.01.T01:CDS 60.0%
GGCAGAGGTGGCTATGAAGG+TGG - Chr7:50300072-50300091 MsG0780038640.01.T01:intron 60.0%
GGCTATGAAGGTGGTCGTGG+TGG - Chr7:50300081-50300100 MsG0780038640.01.T01:intron 60.0%
GGTAGGAATTGGGGAAGGGG+TGG - Chr7:50299420-50299439 MsG0780038640.01.T01:intron 60.0%
GGTGGAGGTTATGGAGGCAG+AGG - Chr7:50300123-50300142 MsG0780038640.01.T01:CDS 60.0%
GGTGGCAGAGGTGGCTATGA+AGG - Chr7:50300069-50300088 MsG0780038640.01.T01:intron 60.0%
GGTGGCTATGAAGGTGGTCG+TGG - Chr7:50300078-50300097 MsG0780038640.01.T01:intron 60.0%
GGTTACGAAGGAGGCAGAGG+TGG - Chr7:50300309-50300328 MsG0780038640.01.T01:CDS 60.0%
GGTTATGAAGGTGGCAGGGG+TGG - Chr7:50300105-50300124 MsG0780038640.01.T01:intron 60.0%
GGTTATGGAGGCAGAGGTGG+AGG - Chr7:50300129-50300148 MsG0780038640.01.T01:CDS 60.0%
GTCGAGGTAGAGGGAGAGGT+AGG - Chr7:50299403-50299422 MsG0780038640.01.T01:intron 60.0%
TACGAAGGAGGCAGAGGTGG+AGG - Chr7:50300153-50300172 MsG0780038640.01.T01:CDS 60.0%
TATGAAGGTGGCAGGGGTGG+AGG - Chr7:50300108-50300127 MsG0780038640.01.T01:CDS 60.0%
TATGGAGGAGGCAGAGGTGG+TGG - Chr7:50300201-50300220 MsG0780038640.01.T01:intron 60.0%
TGAAAGAGGCAGGGGAGGCA+GGG - Chr7:50300344-50300363 MsG0780038640.01.T01:CDS 60.0%
TGGCCGTGGTAGGGGAAGAA+TGG - Chr7:50300371-50300390 MsG0780038640.01.T01:intron 60.0%
! AGAGGTGGAGGGTACGAAGG+AGG - Chr7:50300141-50300160 MsG0780038640.01.T01:CDS 60.0%
! AGAGGTGGAGGGTATGGTGG+AGG - Chr7:50300165-50300184 MsG0780038640.01.T01:intron 60.0%
! GGAGGCAGAGGTGGAGGTAT+GGG - Chr7:50300318-50300337 MsG0780038640.01.T01:CDS 60.0%
! TATGGTGGAGGCAGAGGTGG+AGG - Chr7:50300177-50300196 MsG0780038640.01.T01:intron 60.0%
CGAGGTCGTGGTCGAGGTAG+AGG - Chr7:50299393-50299412 MsG0780038640.01.T01:intron 65.0%
CGTGGTCGAGGTAGAGGGAG+AGG - Chr7:50299399-50299418 MsG0780038640.01.T01:intron 65.0%
GAAAGAGGCAGGGGAGGCAG+GGG - Chr7:50300345-50300364 MsG0780038640.01.T01:CDS 65.0%
GACTCGTATGGCCGAGGTCG+TGG - Chr7:50299381-50299400 MsG0780038640.01.T01:intron 65.0%
GAGGTCGAGGCAGAGGTTGG+GGG - Chr7:50299650-50299669 MsG0780038640.01.T01:CDS 65.0%
GCAGGGGATATGGCCGTGGT+AGG - Chr7:50300361-50300380 MsG0780038640.01.T01:intron 65.0%
GGAGGCAGAGGTGGAGGGTA+TGG - Chr7:50300135-50300154 MsG0780038640.01.T01:CDS 65.0%
GGAGGTCGAGGCAGAGGTTG+GGG - Chr7:50299649-50299668 MsG0780038640.01.T01:CDS 65.0%
GGCAGGGGTGGAGGTTATGG+AGG - Chr7:50300117-50300136 MsG0780038640.01.T01:CDS 65.0%
GGGAGGTCGAGGCAGAGGTT+GGG - Chr7:50299648-50299667 MsG0780038640.01.T01:CDS 65.0%
GGGTACGAAGGAGGCAGAGG+TGG - Chr7:50300150-50300169 MsG0780038640.01.T01:CDS 65.0%
GGTGGCAGGGGTGGAGGTTA+TGG - Chr7:50300114-50300133 MsG0780038640.01.T01:CDS 65.0%
GTAGGAGGCAGAGGTGGAGG+TGG - Chr7:50300282-50300301 MsG0780038640.01.T01:CDS 65.0%
TATGGCCGAGGTCGTGGTCG+AGG - Chr7:50299387-50299406 MsG0780038640.01.T01:intron 65.0%
TCTAATCGTGGCCGAGGGGG+AGG - Chr7:50299631-50299650 MsG0780038640.01.T01:CDS 65.0%
! GGAGGGTACGAAGGAGGCAG+AGG - Chr7:50300147-50300166 MsG0780038640.01.T01:CDS 65.0%
! GGAGGGTATGGTGGAGGCAG+AGG - Chr7:50300171-50300190 MsG0780038640.01.T01:intron 65.0%
! GGCAGAGGTGGAGGGTACGA+AGG - Chr7:50300138-50300157 MsG0780038640.01.T01:CDS 65.0%
! GGCAGAGGTGGAGGGTATGG+TGG - Chr7:50300162-50300181 MsG0780038640.01.T01:intron 65.0%
! GGGTATGGTGGAGGCAGAGG+TGG - Chr7:50300174-50300193 MsG0780038640.01.T01:intron 65.0%
!! GGCAGAGGTTGGGGGTATCG+TGG - Chr7:50299658-50299677 MsG0780038640.01.T01:CDS 65.0%
CTCTGCCTCGACCTCCCCCT+CGG + Chr7:50299645-50299664 None:intergenic 70.0%
GGAGGCAGGGGATATGGCCG+TGG - Chr7:50300357-50300376 MsG0780038640.01.T01:intron 70.0%
GGCAGGGGAGGCAGGGGATA+TGG - Chr7:50300351-50300370 MsG0780038640.01.T01:intron 70.0%
GGGGAGGTCGAGGCAGAGGT+TGG - Chr7:50299647-50299666 MsG0780038640.01.T01:CDS 70.0%
! GGTGGTTACGGTGGCGGCAG+AGG - Chr7:50300006-50300025 MsG0780038640.01.T01:intron 70.0%
! GGTTACGGTGGCGGCAGAGG+TGG - Chr7:50300009-50300028 MsG0780038640.01.T01:intron 70.0%
! TACGGTGGCGGCAGAGGTGG+AGG - Chr7:50300012-50300031 MsG0780038640.01.T01:intron 70.0%
CGAGGGGGAGGTCGAGGCAG+AGG - Chr7:50299643-50299662 MsG0780038640.01.T01:CDS 75.0%
! CGTGGCCGAGGGGGAGGTCG+AGG - Chr7:50299637-50299656 MsG0780038640.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 50298401 50300736 50298401 ID=MsG0780038640.01;Name=MsG0780038640.01
Chr7 mRNA 50298401 50300736 50298401 ID=MsG0780038640.01.T01;Parent=MsG0780038640.01;Name=MsG0780038640.01.T01;_AED=0.48;_eAED=0.49;_QI=0|1|0.85|1|1|1|7|305|334
Chr7 exon 50298401 50299130 50298401 ID=MsG0780038640.01.T01:exon:14744;Parent=MsG0780038640.01.T01
Chr7 exon 50299458 50299520 50299458 ID=MsG0780038640.01.T01:exon:14743;Parent=MsG0780038640.01.T01
Chr7 exon 50299618 50299755 50299618 ID=MsG0780038640.01.T01:exon:14742;Parent=MsG0780038640.01.T01
Chr7 exon 50299835 50299935 50299835 ID=MsG0780038640.01.T01:exon:14741;Parent=MsG0780038640.01.T01
Chr7 exon 50300106 50300180 50300106 ID=MsG0780038640.01.T01:exon:14740;Parent=MsG0780038640.01.T01
Chr7 exon 50300276 50300364 50300276 ID=MsG0780038640.01.T01:exon:14739;Parent=MsG0780038640.01.T01
Chr7 exon 50300623 50300736 50300623 ID=MsG0780038640.01.T01:exon:14738;Parent=MsG0780038640.01.T01
Chr7 CDS 50300623 50300736 50300623 ID=MsG0780038640.01.T01:cds;Parent=MsG0780038640.01.T01
Chr7 CDS 50300276 50300364 50300276 ID=MsG0780038640.01.T01:cds;Parent=MsG0780038640.01.T01
Chr7 CDS 50300106 50300180 50300106 ID=MsG0780038640.01.T01:cds;Parent=MsG0780038640.01.T01
Chr7 CDS 50299835 50299935 50299835 ID=MsG0780038640.01.T01:cds;Parent=MsG0780038640.01.T01
Chr7 CDS 50299618 50299755 50299618 ID=MsG0780038640.01.T01:cds;Parent=MsG0780038640.01.T01
Chr7 CDS 50299458 50299520 50299458 ID=MsG0780038640.01.T01:cds;Parent=MsG0780038640.01.T01
Chr7 CDS 50298706 50299130 50298706 ID=MsG0780038640.01.T01:cds;Parent=MsG0780038640.01.T01
Chr7 three_prime_UTR 50298401 50298705 50298401 ID=MsG0780038640.01.T01:three_prime_utr;Parent=MsG0780038640.01.T01
Gene Sequence

>MsG0780038640.01.T01

ATGCCATCTTATAACGTTTTGTATTTCATCCAGGAAAAGCAAGCAAAAGAGATTGTCTTGAAGGCAATGGGACAAGCAATCAGCAAGACAGTTGCCATTGCAGAGATTCTGAAGAAGAGGATTTCCCCTTTGCACCAAGATACTGCAATCAGCTCAGTTAGCATAACAGATGTGTGGGAGCCCATTGAAGAGGGTCTTGTACCTGTGGAAATGACTCGGCATGTCTCCATGATCTCAATCACCTTGTCAACTGGAGAATTGAACACAAATTCTCCTGGGTATCAAGCTCCATCTACTGCTGAACAATCAAAGCCACACTCCAATTATCAGCAGCAACCTCTGAAACCAGCACAGGATTCTTATAATGCTGTAAATGAAGACTCGTATGGCCGAGGTCGTGGTCGAGGTAGAGGGAGAGGTAGGAATTGGGGAAGGGGTGGTTATGGCTATCAAGGTGGGTATGGAAATTATCAAGGTGGATACGGCTATTACCAAGGTGGATATGCAAATTATCAAGATAATGGTGGGTATTCTAATCGTGGCCGAGGGGGAGGTCGAGGCAGAGGTTGGGGGTATCGTGGTGGTTACGGTGGCGGCAGAGGTGGAGGTTATGAAGGTGGTAGAGGTGGAGGTGGTTATGAAGGTGGCAGAGGTGGCTATGAAGGTGGTCGTGGTGGAGGTTATGAAGGTGGCAGGGGTGGAGGTTATGGAGGCAGAGGTGGAGGGTACGAAGGAGGCAGAGGTGGAGGGTATGGTGGAGGCAGAGGTGGAGGATATGGAGGAGGCAGAGGTGGTGGTTATGAAGGAGGCAGAGGTGGAGGTTATGAAGGAGGCAGAGGTGGAGGAATGGGTTTTGTAGGAGGCAGAGGTGGAGGTGGTATGGGTTACGAAGGAGGCAGAGGTGGAGGTATGGGTTATGAAAGAGGCAGGGGAGGCAGGGGATATGGCCGTGGTAGGGGAAGAATGGATGGACGTGGTGGTAGAGGTGGAGAAAACCAGGCATGA
Protein sequence

>MsG0780038640.01.T01

MPSYNVLYFIQEKQAKEIVLKAMGQAISKTVAIAEILKKRISPLHQDTAISSVSITDVWEPIEEGLVPVEMTRHVSMISITLSTGELNTNSPGYQAPSTAEQSKPHSNYQQQPLKPAQDSYNAVNEDSYGRGRGRGRGRGRNWGRGGYGYQGGYGNYQGGYGYYQGGYANYQDNGGYSNRGRGGGRGRGWGYRGGYGGGRGGGYEGGRGGGGYEGGRGGYEGGRGGGYEGGRGGGYGGRGGGYEGGRGGGYGGGRGGGYGGGRGGGYEGGRGGGYEGGRGGGMGFVGGRGGGGMGYEGGRGGGMGYERGRGGRGYGRGRGRMDGRGGRGGENQA*