Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000615.01.T01 | XP_003588709.2 | 100 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 1.10E-89 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000615.01.T01 | Q9C944 | 88.06 | 134 | 16 | 0 | 1 | 134 | 1 | 134 | 5.16E-75 | 222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000615.01.T01 | G7I6D5 | 100.000 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 5.27e-90 | 266 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048135.01 | MsG0180000615.01 | 0.866273 | 3.215572e-65 | 1.077544e-61 |
| MsG0080048687.01 | MsG0180000615.01 | 0.848249 | 6.911603e-60 | 1.260584e-56 |
| MsG0080048971.01 | MsG0180000615.01 | 0.856089 | 4.070739e-62 | 9.603994e-59 |
| MsG0080049013.01 | MsG0180000615.01 | -0.812157 | 4.882620e-51 | 3.081065e-48 |
| MsG0180000139.01 | MsG0180000615.01 | 0.818546 | 1.852449e-52 | 1.390803e-49 |
| MsG0180000575.01 | MsG0180000615.01 | 0.878912 | 1.912266e-69 | 1.016205e-65 |
| MsG0180000614.01 | MsG0180000615.01 | 0.963297 | 6.511842e-122 | 3.480290e-116 |
| MsG0180000615.01 | MsG0180000743.01 | 0.860820 | 1.582102e-63 | 4.381959e-60 |
| MsG0180000615.01 | MsG0180001700.01 | 0.843055 | 1.772381e-58 | 2.739354e-55 |
| MsG0180000615.01 | MsG0180002458.01 | 0.810056 | 1.393533e-50 | 8.316331e-48 |
| MsG0180000615.01 | MsG0180002482.01 | 0.803029 | 4.236814e-49 | 2.106806e-46 |
| MsG0180000615.01 | MsG0180002489.01 | 0.807176 | 5.744375e-50 | 3.177778e-47 |
| MsG0180000615.01 | MsG0180003548.01 | 0.808837 | 2.545678e-50 | 1.470748e-47 |
| MsG0180000615.01 | MsG0180003612.01 | 0.811889 | 5.586257e-51 | 3.499205e-48 |
| MsG0180000615.01 | MsG0180003793.01 | 0.892756 | 1.183504e-74 | 1.096156e-70 |
| MsG0180000615.01 | MsG0180004129.01 | 0.809234 | 2.092915e-50 | 1.222194e-47 |
| MsG0180000615.01 | MsG0180004130.01 | 0.837659 | 4.563342e-57 | 5.968768e-54 |
| MsG0180000615.01 | MsG0180004152.01 | 0.800222 | 1.595131e-48 | 7.386630e-46 |
| MsG0180000615.01 | MsG0180004481.01 | 0.820842 | 5.538592e-53 | 4.431991e-50 |
| MsG0180000615.01 | MsG0180004482.01 | 0.810998 | 8.720081e-51 | 5.336182e-48 |
| MsG0180000615.01 | MsG0180004509.01 | 0.852539 | 4.320241e-61 | 9.056292e-58 |
| MsG0180000615.01 | MsG0180004854.01 | 0.859457 | 4.081505e-63 | 1.078658e-59 |
| MsG0180000615.01 | MsG0180004861.01 | 0.804940 | 1.696779e-49 | 8.863384e-47 |
| MsG0180000615.01 | MsG0180005334.01 | 0.818927 | 1.518437e-52 | 1.152183e-49 |
| MsG0180000615.01 | MsG0180005426.01 | 0.845835 | 3.169568e-59 | 5.350821e-56 |
| MsG0180000615.01 | MsG0180005659.01 | 0.808808 | 2.581616e-50 | 1.490401e-47 |
| MsG0180000615.01 | MsG0180005851.01 | 0.837011 | 6.683844e-57 | 8.569829e-54 |
| MsG0180000615.01 | MsG0180006013.01 | 0.829042 | 6.423755e-55 | 6.497806e-52 |
| MsG0180000615.01 | MsG0280006406.01 | 0.814958 | 1.181494e-51 | 8.039715e-49 |
| MsG0180000615.01 | MsG0280006422.01 | 0.886076 | 4.684510e-72 | 3.296611e-68 |
| MsG0180000615.01 | MsG0280006424.01 | 0.876739 | 1.098427e-68 | 5.385061e-65 |
| MsG0180000615.01 | MsG0280006483.01 | 0.860146 | 2.530982e-63 | 6.849864e-60 |
| MsG0180000615.01 | MsG0280006993.01 | 0.835622 | 1.507546e-56 | 1.853595e-53 |
| MsG0180000615.01 | MsG0280007222.01 | 0.823911 | 1.073359e-53 | 9.366700e-51 |
| MsG0180000615.01 | MsG0280007787.01 | 0.804452 | 2.146029e-49 | 1.106854e-46 |
| MsG0180000615.01 | MsG0280007847.01 | 0.815711 | 8.038644e-52 | 5.584043e-49 |
| MsG0180000615.01 | MsG0280009141.01 | 0.820304 | 7.361504e-53 | 5.803134e-50 |
| MsG0180000615.01 | MsG0280009375.01 | 0.844104 | 9.292283e-59 | 1.484662e-55 |
| MsG0180000615.01 | MsG0280010258.01 | 0.801088 | 1.062029e-48 | 5.027539e-46 |
| MsG0180000615.01 | MsG0280010383.01 | 0.864258 | 1.383656e-64 | 4.316877e-61 |
| MsG0180000615.01 | MsG0280010495.01 | 0.802784 | 4.759627e-49 | 2.352240e-46 |
| MsG0180000615.01 | MsG0280010776.01 | 0.830539 | 2.773745e-55 | 2.930860e-52 |
| MsG0180000615.01 | MsG0280010801.01 | 0.837540 | 4.893825e-57 | 6.377011e-54 |
| MsG0180000615.01 | MsG0280011387.01 | 0.802322 | 5.927579e-49 | 2.895209e-46 |
| MsG0180000615.01 | MsG0280011388.01 | 0.839965 | 1.155809e-57 | 1.622456e-54 |
| MsG0180000615.01 | MsG0380012073.01 | 0.890136 | 1.293566e-73 | 1.074170e-69 |
| MsG0180000615.01 | MsG0380012566.01 | 0.829594 | 4.717550e-55 | 4.850476e-52 |
| MsG0180000615.01 | MsG0380014647.01 | 0.844262 | 8.429276e-59 | 1.353313e-55 |
| MsG0180000615.01 | MsG0380015027.01 | 0.859316 | 4.499630e-63 | 1.183382e-59 |
| MsG0180000615.01 | MsG0380016389.01 | 0.828425 | 9.053036e-55 | 8.995352e-52 |
| MsG0180000615.01 | MsG0380016559.01 | 0.801222 | 9.967157e-49 | 4.734104e-46 |
| MsG0180000615.01 | MsG0380016560.01 | 0.803671 | 3.119209e-49 | 1.576819e-46 |
| MsG0180000615.01 | MsG0380016860.01 | 0.845718 | 3.410347e-59 | 5.735438e-56 |
| MsG0180000615.01 | MsG0380017382.01 | 0.860520 | 1.950483e-63 | 5.346613e-60 |
| MsG0180000615.01 | MsG0380017998.01 | 0.806666 | 7.363936e-50 | 4.020042e-47 |
| MsG0180000615.01 | MsG0480018104.01 | 0.809282 | 2.044046e-50 | 1.195143e-47 |
| MsG0180000615.01 | MsG0480018477.01 | 0.894640 | 2.038739e-75 | 2.044354e-71 |
| MsG0180000615.01 | MsG0480018497.01 | -0.831213 | 1.896524e-55 | 2.044257e-52 |
| MsG0180000615.01 | MsG0480018894.01 | 0.815823 | 7.586815e-52 | 5.286120e-49 |
| MsG0180000615.01 | MsG0480020959.01 | 0.818632 | 1.771629e-52 | 1.333188e-49 |
| MsG0180000615.01 | MsG0480021006.01 | 0.831996 | 1.216111e-55 | 1.341758e-52 |
| MsG0180000615.01 | MsG0480021448.01 | 0.889115 | 3.233196e-73 | 2.574090e-69 |
| MsG0180000615.01 | MsG0480021451.01 | 0.861602 | 9.145007e-64 | 2.602072e-60 |
| MsG0180000615.01 | MsG0480021453.01 | 0.889512 | 2.267623e-73 | 1.835011e-69 |
| MsG0180000615.01 | MsG0480021464.01 | 0.800596 | 1.337912e-48 | 6.254712e-46 |
| MsG0180000615.01 | MsG0480021994.01 | 0.807896 | 4.039681e-50 | 2.276952e-47 |
| MsG0180000615.01 | MsG0480022164.01 | 0.818342 | 2.060548e-52 | 1.538423e-49 |
| MsG0180000615.01 | MsG0480022223.01 | 0.825044 | 5.809748e-54 | 5.236793e-51 |
| MsG0180000615.01 | MsG0480022696.01 | 0.803772 | 2.972553e-49 | 1.506628e-46 |
| MsG0180000615.01 | MsG0480022795.01 | 0.823804 | 1.136845e-53 | 9.891365e-51 |
| MsG0180000615.01 | MsG0480022960.01 | 0.822270 | 2.590760e-53 | 2.158149e-50 |
| MsG0180000615.01 | MsG0480023149.01 | 0.847826 | 9.043532e-60 | 1.627426e-56 |
| MsG0180000615.01 | MsG0480023399.01 | 0.863943 | 1.734342e-64 | 5.351475e-61 |
| MsG0180000615.01 | MsG0480023467.01 | 0.810374 | 1.190119e-50 | 7.161549e-48 |
| MsG0180000615.01 | MsG0480023771.01 | 0.803773 | 2.970763e-49 | 1.505773e-46 |
| MsG0180000615.01 | MsG0480023968.01 | 0.803653 | 3.145598e-49 | 1.589453e-46 |
| MsG0180000615.01 | MsG0580024051.01 | 0.816672 | 4.900037e-52 | 3.494404e-49 |
| MsG0180000615.01 | MsG0580024458.01 | -0.805847 | 1.095368e-49 | 5.856499e-47 |
| MsG0180000615.01 | MsG0580025409.01 | 0.818731 | 1.681669e-52 | 1.269000e-49 |
| MsG0180000615.01 | MsG0580027043.01 | 0.833630 | 4.777186e-56 | 5.532918e-53 |
| MsG0180000615.01 | MsG0580029132.01 | 0.829010 | 6.538547e-55 | 6.607786e-52 |
| MsG0180000615.01 | MsG0680031628.01 | 0.881820 | 1.747204e-70 | 1.038711e-66 |
| MsG0180000615.01 | MsG0680031967.01 | 0.811369 | 7.247773e-51 | 4.478126e-48 |
| MsG0180000615.01 | MsG0680032430.01 | 0.841114 | 5.780365e-58 | 8.407380e-55 |
| MsG0180000615.01 | MsG0680032770.01 | 0.870812 | 1.099208e-66 | 4.334021e-63 |
| MsG0180000615.01 | MsG0680034671.01 | 0.804886 | 1.741586e-49 | 9.085137e-47 |
| MsG0180000615.01 | MsG0680035848.01 | 0.822258 | 2.608254e-53 | 2.171913e-50 |
| MsG0180000615.01 | MsG0780036240.01 | 0.826970 | 2.025564e-54 | 1.929014e-51 |
| MsG0180000615.01 | MsG0780036546.01 | 0.840517 | 8.288708e-58 | 1.183609e-54 |
| MsG0180000615.01 | MsG0780036547.01 | 0.864835 | 9.136686e-65 | 2.908708e-61 |
| MsG0180000615.01 | MsG0780036822.01 | 0.813351 | 2.674765e-51 | 1.742635e-48 |
| MsG0180000615.01 | MsG0780037240.01 | 0.844823 | 5.952945e-59 | 9.728214e-56 |
| MsG0180000615.01 | MsG0780038400.01 | 0.896708 | 2.845450e-76 | 3.114097e-72 |
| MsG0180000615.01 | MsG0780038587.01 | 0.832384 | 9.749088e-56 | 1.087904e-52 |
| MsG0180000615.01 | MsG0780038640.01 | 0.807351 | 5.274088e-50 | 2.930941e-47 |
| MsG0180000615.01 | MsG0780038645.01 | 0.815725 | 7.979220e-52 | 5.545031e-49 |
| MsG0180000615.01 | MsG0780039643.01 | 0.820412 | 6.955664e-53 | 5.499903e-50 |
| MsG0180000615.01 | MsG0780039844.01 | 0.821723 | 3.470184e-53 | 2.845863e-50 |
| MsG0180000615.01 | MsG0780039848.01 | 0.852714 | 3.850879e-61 | 8.118630e-58 |
| MsG0180000615.01 | MsG0780040338.01 | 0.818151 | 2.276734e-52 | 1.690746e-49 |
| MsG0180000615.01 | MsG0780040544.01 | 0.813966 | 1.958634e-51 | 1.297518e-48 |
| MsG0180000615.01 | MsG0780040841.01 | 0.804537 | 2.060187e-49 | 1.064908e-46 |
| MsG0180000615.01 | MsG0780040900.01 | 0.800269 | 1.560030e-48 | 7.232855e-46 |
| MsG0180000615.01 | MsG0780041223.01 | 0.889017 | 3.529311e-73 | 2.798827e-69 |
| MsG0180000615.01 | MsG0780041295.01 | 0.880359 | 5.857244e-70 | 3.290241e-66 |
| MsG0180000615.01 | MsG0780041462.01 | 0.854554 | 1.139034e-61 | 2.553544e-58 |
| MsG0180000615.01 | MsG0780041519.01 | 0.826653 | 2.410210e-54 | 2.274203e-51 |
| MsG0180000615.01 | MsG0880041967.01 | 0.841586 | 4.345001e-58 | 6.413886e-55 |
| MsG0180000615.01 | MsG0880042131.01 | 0.821852 | 3.238458e-53 | 2.665806e-50 |
| MsG0180000615.01 | MsG0880042519.01 | 0.804357 | 2.245540e-49 | 1.155413e-46 |
| MsG0180000615.01 | MsG0880042779.01 | 0.844398 | 7.750158e-59 | 1.249602e-55 |
| MsG0180000615.01 | MsG0880043465.01 | 0.800464 | 1.423576e-48 | 6.632743e-46 |
| MsG0180000615.01 | MsG0880043592.01 | 0.816427 | 5.561042e-52 | 3.939102e-49 |
| MsG0180000615.01 | MsG0880045145.01 | 0.836794 | 7.595131e-57 | 9.674848e-54 |
| MsG0180000615.01 | MsG0880045631.01 | 0.807556 | 4.772327e-50 | 2.666182e-47 |
| MsG0180000615.01 | MsG0880046126.01 | 0.836294 | 1.018387e-56 | 1.278029e-53 |
| MsG0180000615.01 | MsG0880046177.01 | 0.876232 | 1.644655e-68 | 7.911535e-65 |
| MsG0180000615.01 | MsG0880046444.01 | 0.849271 | 3.599846e-60 | 6.788009e-57 |
| MsG0180000615.01 | MsG0880046575.01 | 0.828288 | 9.769934e-55 | 9.668440e-52 |
| MsG0180000615.01 | MsG0880046933.01 | 0.842943 | 1.898443e-58 | 2.923943e-55 |
| MsG0180000615.01 | MsG0880047427.01 | 0.858526 | 7.755768e-63 | 1.985197e-59 |
| MsG0180000615.01 | MsG0880047448.01 | 0.841586 | 4.344310e-58 | 6.412992e-55 |
| MsG0180000615.01 | MsG0880047607.01 | 0.821406 | 4.105746e-53 | 3.337278e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000615.01.T01 | MTR_1g011750 | 100.000 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 1.34e-93 | 266 |
| MsG0180000615.01.T01 | MTR_1g011850 | 100.000 | 134 | 0 | 0 | 1 | 134 | 1 | 134 | 1.34e-93 | 266 |
| MsG0180000615.01.T01 | MTR_1g071040 | 86.567 | 134 | 18 | 0 | 1 | 134 | 1 | 134 | 2.58e-73 | 215 |
| MsG0180000615.01.T01 | MTR_1g114050 | 81.250 | 128 | 24 | 0 | 7 | 134 | 4 | 131 | 3.79e-71 | 209 |
| MsG0180000615.01.T01 | MTR_4g048490 | 61.940 | 134 | 22 | 1 | 1 | 134 | 1 | 105 | 4.96e-41 | 132 |
| MsG0180000615.01.T01 | MTR_2g082510 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 1.87e-40 | 132 |
| MsG0180000615.01.T01 | MTR_2g082220 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 2.52e-40 | 131 |
| MsG0180000615.01.T01 | MTR_7g108320 | 58.333 | 132 | 47 | 4 | 1 | 130 | 1 | 126 | 3.25e-40 | 131 |
| MsG0180000615.01.T01 | MTR_7g114060 | 58.197 | 122 | 49 | 2 | 10 | 130 | 3 | 123 | 1.06e-39 | 130 |
| MsG0180000615.01.T01 | MTR_7g114040 | 58.197 | 122 | 49 | 2 | 10 | 130 | 3 | 123 | 1.06e-39 | 130 |
| MsG0180000615.01.T01 | MTR_7g093910 | 61.682 | 107 | 39 | 2 | 25 | 130 | 21 | 126 | 3.91e-38 | 126 |
| MsG0180000615.01.T01 | MTR_7g113160 | 55.652 | 115 | 49 | 2 | 19 | 132 | 19 | 132 | 9.60e-37 | 123 |
| MsG0180000615.01.T01 | MTR_2g096610 | 59.292 | 113 | 44 | 2 | 23 | 134 | 19 | 130 | 2.34e-36 | 122 |
| MsG0180000615.01.T01 | MTR_4g063280 | 59.292 | 113 | 44 | 2 | 23 | 134 | 15 | 126 | 7.03e-36 | 120 |
| MsG0180000615.01.T01 | MTR_4g071150 | 61.111 | 108 | 40 | 2 | 27 | 133 | 25 | 131 | 5.73e-35 | 118 |
| MsG0180000615.01.T01 | MTR_8g086640 | 60.550 | 109 | 41 | 2 | 27 | 134 | 25 | 132 | 6.37e-35 | 118 |
| MsG0180000615.01.T01 | MTR_4g064967 | 59.633 | 109 | 42 | 2 | 27 | 134 | 25 | 132 | 7.16e-35 | 118 |
| MsG0180000615.01.T01 | MTR_4g064005 | 59.633 | 109 | 42 | 2 | 27 | 134 | 25 | 132 | 8.43e-35 | 118 |
| MsG0180000615.01.T01 | MTR_2g096570 | 60.185 | 108 | 41 | 2 | 27 | 133 | 24 | 130 | 1.16e-34 | 118 |
| MsG0180000615.01.T01 | MTR_7g027610 | 57.391 | 115 | 25 | 1 | 20 | 134 | 8 | 98 | 1.91e-34 | 116 |
| MsG0180000615.01.T01 | MTR_4g063410 | 60.952 | 105 | 39 | 2 | 27 | 130 | 25 | 128 | 5.14e-34 | 116 |
| MsG0180000615.01.T01 | MTR_0653s0030 | 56.481 | 108 | 22 | 1 | 5 | 112 | 15 | 97 | 1.27e-30 | 107 |
| MsG0180000615.01.T01 | MTR_7g114050 | 53.448 | 116 | 40 | 5 | 19 | 132 | 13 | 116 | 2.20e-28 | 101 |
| MsG0180000615.01.T01 | MTR_4g063300 | 62.687 | 67 | 24 | 1 | 55 | 120 | 17 | 83 | 5.00e-20 | 79.3 |
| MsG0180000615.01.T01 | MTR_6g005150 | 45.283 | 106 | 47 | 4 | 27 | 130 | 27 | 123 | 1.37e-19 | 79.0 |
| MsG0180000615.01.T01 | MTR_7g427690 | 78.947 | 38 | 8 | 0 | 96 | 133 | 412 | 449 | 4.76e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000615.01.T01 | AT1G52740 | 88.060 | 134 | 16 | 0 | 1 | 134 | 1 | 134 | 5.26e-76 | 222 |
| MsG0180000615.01.T01 | AT3G54560 | 84.559 | 136 | 19 | 1 | 1 | 134 | 1 | 136 | 7.74e-72 | 211 |
| MsG0180000615.01.T01 | AT3G54560 | 84.559 | 136 | 19 | 1 | 1 | 134 | 1 | 136 | 7.74e-72 | 211 |
| MsG0180000615.01.T01 | AT2G38810 | 81.618 | 136 | 23 | 1 | 1 | 134 | 1 | 136 | 1.01e-71 | 211 |
| MsG0180000615.01.T01 | AT2G38810 | 81.618 | 136 | 23 | 1 | 1 | 134 | 1 | 136 | 1.01e-71 | 211 |
| MsG0180000615.01.T01 | AT2G38810 | 81.618 | 136 | 23 | 1 | 1 | 134 | 1 | 136 | 1.01e-71 | 211 |
| MsG0180000615.01.T01 | AT2G38810 | 81.618 | 136 | 23 | 1 | 1 | 134 | 1 | 136 | 1.01e-71 | 211 |
| MsG0180000615.01.T01 | AT4G13570 | 66.667 | 111 | 33 | 1 | 18 | 124 | 8 | 118 | 3.28e-45 | 143 |
| MsG0180000615.01.T01 | AT4G13570 | 75.556 | 90 | 22 | 0 | 35 | 124 | 35 | 124 | 3.59e-44 | 141 |
| MsG0180000615.01.T01 | AT4G27230 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 2.42e-40 | 131 |
| MsG0180000615.01.T01 | AT4G27230 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 2.42e-40 | 131 |
| MsG0180000615.01.T01 | AT5G54640 | 64.545 | 110 | 37 | 2 | 24 | 132 | 14 | 122 | 2.45e-40 | 131 |
| MsG0180000615.01.T01 | AT3G20670 | 65.741 | 108 | 35 | 2 | 24 | 130 | 14 | 120 | 6.88e-40 | 130 |
| MsG0180000615.01.T01 | AT1G08880 | 64.762 | 105 | 35 | 2 | 25 | 128 | 21 | 124 | 1.01e-39 | 130 |
| MsG0180000615.01.T01 | AT1G51060 | 63.636 | 110 | 38 | 2 | 24 | 132 | 14 | 122 | 1.11e-39 | 130 |
| MsG0180000615.01.T01 | AT1G54690 | 63.810 | 105 | 36 | 2 | 25 | 128 | 21 | 124 | 2.89e-39 | 129 |
| MsG0180000615.01.T01 | AT5G02560 | 61.947 | 113 | 41 | 2 | 23 | 134 | 21 | 132 | 1.19e-38 | 128 |
| MsG0180000615.01.T01 | AT5G27670 | 60.870 | 115 | 43 | 2 | 19 | 132 | 18 | 131 | 4.54e-37 | 124 |
| MsG0180000615.01.T01 | AT5G59870 | 61.261 | 111 | 41 | 2 | 23 | 132 | 21 | 130 | 3.64e-36 | 121 |
| MsG0180000615.01.T01 | AT5G02560 | 51.095 | 137 | 41 | 3 | 23 | 134 | 21 | 156 | 3.79e-33 | 115 |
Find 51 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGTCTTTGAGGTTTGC+TGG | 0.259581 | 1:-8708252 | None:intergenic |
| TCTTCTTGTCCTTGTCTTTG+AGG | 0.316058 | 1:-8708260 | None:intergenic |
| TTCCTCAAGAGCTGGTCTTC+AGG | 0.343744 | 1:+8708296 | MsG0180000615.01.T01:CDS |
| TATGAACATTCATTCCTTTG+AGG | 0.376752 | 1:-8711126 | None:intergenic |
| GGTGATAACAACTTTATTTG+TGG | 0.407928 | 1:+8711196 | MsG0180000615.01.T01:three_prime_UTR |
| CAATGGCACATGGAAGAGTT+GGG | 0.442531 | 1:+8710883 | MsG0180000615.01.T01:CDS |
| AGTTTATTCTGCCGCTATCC+TGG | 0.451988 | 1:+8710917 | MsG0180000615.01.T01:CDS |
| GTATTTAACTGCAGAGGTGT+TGG | 0.470183 | 1:+8710941 | MsG0180000615.01.T01:CDS |
| ACAATGGCACATGGAAGAGT+TGG | 0.476378 | 1:+8710882 | MsG0180000615.01.T01:CDS |
| GGAGCGAAGGGTTTGACAAC+CGG | 0.477894 | 1:+8708222 | MsG0180000615.01.T01:CDS |
| CTCATCAAAGGAACAATAGC+TGG | 0.487626 | 1:+8711059 | MsG0180000615.01.T01:CDS |
| TTGAAGTGCGAAAACATGTC+GGG | 0.497395 | 1:+8708195 | None:intergenic |
| GGATAATTCGCTCCTTGCGT+TGG | 0.505084 | 1:+8711217 | MsG0180000615.01.T01:three_prime_UTR |
| ATAAGAGACTTGTGGATATG+AGG | 0.507095 | 1:-8711095 | None:intergenic |
| AGACGATGGATACGTCCGAC+AGG | 0.539450 | 1:-8710846 | None:intergenic |
| AACTGCAGAGGTGTTGGAGT+TGG | 0.540859 | 1:+8710947 | MsG0180000615.01.T01:CDS |
| AGCTCTTGAGGAACGAGATG+TGG | 0.542232 | 1:-8708286 | None:intergenic |
| AACCTGAAGACCAGCTCTTG+AGG | 0.543571 | 1:-8708298 | None:intergenic |
| ACATCTCGTTCCTCAAGAGC+TGG | 0.546311 | 1:+8708288 | MsG0180000615.01.T01:CDS |
| TAATTCTCTCTAATTAACGC+AGG | 0.546344 | 1:+8711147 | MsG0180000615.01.T01:three_prime_UTR |
| GCAGAGGTGTTGGAGTTGGC+TGG | 0.558822 | 1:+8710951 | MsG0180000615.01.T01:CDS |
| CAATGCAAGCAAGGATCTGA+AGG | 0.565081 | 1:+8710974 | MsG0180000615.01.T01:CDS |
| TGCGAAAACATGTCGGGGAA+AGG | 0.567757 | 1:+8708201 | None:intergenic |
| CCTCTGCAGTTAAATACTCC+AGG | 0.571308 | 1:-8710935 | None:intergenic |
| GTTGGCTGGCAATGCAAGCA+AGG | 0.571379 | 1:+8710965 | MsG0180000615.01.T01:CDS |
| GAACTTGACACTCTCATCAA+AGG | 0.571379 | 1:+8711047 | MsG0180000615.01.T01:CDS |
| AAATTCAGATAATCTAAAGA+AGG | 0.572497 | 1:-8711258 | None:intergenic |
| ACTTGTTGATAAGAGACTTG+TGG | 0.572936 | 1:-8711103 | None:intergenic |
| TCAGATAATCTAAAGAAGGA+TGG | 0.582849 | 1:-8711254 | None:intergenic |
| ATAGCAAGCTGTAGATGTCT+CGG | 0.584334 | 1:-8711011 | None:intergenic |
| TCTTATCAACAAGTCCTCAA+AGG | 0.584732 | 1:+8711112 | MsG0180000615.01.T01:CDS |
| CATCTACAGCTTGCTATCCG+TGG | 0.586408 | 1:+8711017 | MsG0180000615.01.T01:CDS |
| TCCATCGTCTTCTGAAGTCA+AGG | 0.589423 | 1:+8710859 | MsG0180000615.01.T01:CDS |
| CATGTCGGGGAAAGGAGCGA+AGG | 0.599837 | 1:+8708209 | None:intergenic |
| AATTCTCTCTAATTAACGCA+GGG | 0.600377 | 1:+8711148 | MsG0180000615.01.T01:three_prime_UTR |
| GCTCTTGAGGAACGAGATGT+GGG | 0.607406 | 1:-8708285 | None:intergenic |
| AAAGGAACAATAGCTGGTGG+TGG | 0.608922 | 1:+8711065 | MsG0180000615.01.T01:CDS |
| AAGTCAAGGACAATGGCACA+TGG | 0.622887 | 1:+8710873 | MsG0180000615.01.T01:CDS |
| ATGTCGGGGAAAGGAGCGAA+GGG | 0.624226 | 1:+8708210 | MsG0180000615.01.T01:CDS |
| CCTGGAGTATTTAACTGCAG+AGG | 0.624849 | 1:+8710935 | MsG0180000615.01.T01:CDS |
| CAATCAATCAAACCAACGCA+AGG | 0.626065 | 1:-8711229 | None:intergenic |
| GACGATGGATACGTCCGACA+GGG | 0.626692 | 1:-8710845 | None:intergenic |
| TTCTACATACAGTTCCCTGT+CGG | 0.628096 | 1:+8710831 | MsG0180000615.01.T01:intron |
| TGTCAAGTTCTTCATCTCCA+CGG | 0.636093 | 1:-8711034 | None:intergenic |
| ACCAGCAAACCTCAAAGACA+AGG | 0.637885 | 1:+8708251 | MsG0180000615.01.T01:CDS |
| AATGGCACATGGAAGAGTTG+GGG | 0.645846 | 1:+8710884 | MsG0180000615.01.T01:CDS |
| TGAAGTGCGAAAACATGTCG+GGG | 0.649052 | 1:+8708196 | None:intergenic |
| TCTTCTGAAGTCAAGGACAA+TGG | 0.655563 | 1:+8710866 | MsG0180000615.01.T01:CDS |
| ATCAAAGGAACAATAGCTGG+TGG | 0.661257 | 1:+8711062 | MsG0180000615.01.T01:CDS |
| TCCTTGACTTCAGAAGACGA+TGG | 0.668973 | 1:-8710860 | None:intergenic |
| AGTTAAATACTCCAGGATAG+CGG | 0.673071 | 1:-8710928 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTATTTTTTTGTTAAA+AGG | + | Chr1:8708490-8708509 | MsG0180000615.01.T01:intron | 10.0% |
| !! | ACAAAAAGAATAGTAAAAAA+CGG | - | Chr1:8708774-8708793 | None:intergenic | 15.0% |
| !!! | AAAGGATTTTAATGTAATTT+CGG | + | Chr1:8711175-8711194 | MsG0180000615.01.T01:three_prime_UTR | 15.0% |
| !!! | AGTATTATTTTATAACTGTT+TGG | + | Chr1:8710278-8710297 | MsG0180000615.01.T01:intron | 15.0% |
| !!! | TTTATGATTTGTAATATCAA+TGG | + | Chr1:8709107-8709126 | MsG0180000615.01.T01:intron | 15.0% |
| !!! | TTTTTTGTTAAAAGGATAAT+GGG | + | Chr1:8708498-8708517 | MsG0180000615.01.T01:intron | 15.0% |
| !!! | TTTTTTTGTTAAAAGGATAA+TGG | + | Chr1:8708497-8708516 | MsG0180000615.01.T01:intron | 15.0% |
| !!! | TTTTTTTGTTTGTTTTAAGT+AGG | + | Chr1:8709836-8709855 | MsG0180000615.01.T01:intron | 15.0% |
| !! | AATATATACACCTATTAAGA+AGG | - | Chr1:8709393-8709412 | None:intergenic | 20.0% |
| !! | ATATATACACCTATTAAGAA+GGG | - | Chr1:8709392-8709411 | None:intergenic | 20.0% |
| !! | ATATATTCAGTAATGCTAAA+TGG | + | Chr1:8709406-8709425 | MsG0180000615.01.T01:intron | 20.0% |
| !! | ATTATAAAAGATAGTCCATT+CGG | - | Chr1:8709463-8709482 | None:intergenic | 20.0% |
| !! | TATTGTATTTCTTTGATTCT+TGG | + | Chr1:8710689-8710708 | MsG0180000615.01.T01:intron | 20.0% |
| !! | TGGAAAATGAAAAGATAATT+TGG | - | Chr1:8709543-8709562 | None:intergenic | 20.0% |
| !! | TTAATTAATCAATATCGAAG+TGG | + | Chr1:8709724-8709743 | MsG0180000615.01.T01:intron | 20.0% |
| !! | TTATAGAATCATATGTGAAT+GGG | + | Chr1:8709861-8709880 | MsG0180000615.01.T01:intron | 20.0% |
| !!! | AAAAATTGTAGTTTGAGATT+TGG | + | Chr1:8708538-8708557 | MsG0180000615.01.T01:intron | 20.0% |
| !!! | AAAATTGTAGTTTGAGATTT+GGG | + | Chr1:8708539-8708558 | MsG0180000615.01.T01:intron | 20.0% |
| !!! | CTTCGATATTGATTAATTAA+TGG | - | Chr1:8709724-8709743 | None:intergenic | 20.0% |
| !!! | TTTTACCAAGATTGAAATTT+GGG | + | Chr1:8708602-8708621 | MsG0180000615.01.T01:intron | 20.0% |
| !!! | TTTTATCTAAGATGAAGTAT+GGG | + | Chr1:8708563-8708582 | MsG0180000615.01.T01:intron | 20.0% |
| !!! | TTTTTACCAAGATTGAAATT+TGG | + | Chr1:8708601-8708620 | MsG0180000615.01.T01:intron | 20.0% |
| !!! | TTTTTATCTAAGATGAAGTA+TGG | + | Chr1:8708562-8708581 | MsG0180000615.01.T01:intron | 20.0% |
| ! | AAAAAGACAAAATCATCACA+CGG | - | Chr1:8710640-8710659 | None:intergenic | 25.0% |
| ! | AAAAGAATAGTAAAAAACGG+TGG | - | Chr1:8708771-8708790 | None:intergenic | 25.0% |
| ! | AGAGAACATATGCAAAATAA+GGG | - | Chr1:8709189-8709208 | None:intergenic | 25.0% |
| ! | AGTGAAAAAGGTTAAATTTG+AGG | - | Chr1:8708386-8708405 | None:intergenic | 25.0% |
| ! | CAAAAAAACAATCAATCCAT+TGG | - | Chr1:8709824-8709843 | None:intergenic | 25.0% |
| ! | CAAAAGAAGAAATCAAATCA+TGG | - | Chr1:8709054-8709073 | None:intergenic | 25.0% |
| ! | CAGTGAAAAACTAATAACAT+GGG | - | Chr1:8708681-8708700 | None:intergenic | 25.0% |
| ! | CAGTTAAGCAAATTGTAAAT+GGG | - | Chr1:8708705-8708724 | None:intergenic | 25.0% |
| ! | CTATTATTTCCCTTCTTAAT+AGG | + | Chr1:8709380-8709399 | MsG0180000615.01.T01:intron | 25.0% |
| ! | GAGAATTGAATAGTTGAATA+TGG | + | Chr1:8708876-8708895 | MsG0180000615.01.T01:intron | 25.0% |
| ! | GTTATAGAATCATATGTGAA+TGG | + | Chr1:8709860-8709879 | MsG0180000615.01.T01:intron | 25.0% |
| ! | TATAGAATCATATGTGAATG+GGG | + | Chr1:8709862-8709881 | MsG0180000615.01.T01:intron | 25.0% |
| ! | TCAGTGAAAAACTAATAACA+TGG | - | Chr1:8708682-8708701 | None:intergenic | 25.0% |
| ! | TCAGTTAAGCAAATTGTAAA+TGG | - | Chr1:8708706-8708725 | None:intergenic | 25.0% |
| ! | TTGTTTGAAAAACTTAGACA+AGG | - | Chr1:8709223-8709242 | None:intergenic | 25.0% |
| !! | AACAGATTTTCACATATACA+TGG | - | Chr1:8710360-8710379 | None:intergenic | 25.0% |
| !! | ACAGATTTTCACATATACAT+GGG | - | Chr1:8710359-8710378 | None:intergenic | 25.0% |
| !! | AGTTATCACATAATCTTTTG+TGG | + | Chr1:8710072-8710091 | MsG0180000615.01.T01:intron | 25.0% |
| !! | GCAATTCATTTTACAACTTA+AGG | - | Chr1:8709146-8709165 | None:intergenic | 25.0% |
| !! | TTTATCTAAGATGAAGTATG+GGG | + | Chr1:8708564-8708583 | MsG0180000615.01.T01:intron | 25.0% |
| !!! | AAAAGATAATTTGGTGTAAG+GGG | - | Chr1:8709534-8709553 | None:intergenic | 25.0% |
| !!! | AATTACCTTGTTTTGTTTCA+TGG | + | Chr1:8708803-8708822 | MsG0180000615.01.T01:intron | 25.0% |
| !!! | GAAAAGATAATTTGGTGTAA+GGG | - | Chr1:8709535-8709554 | None:intergenic | 25.0% |
| !!! | GGATGTTCATTTTATTTCTT+TGG | + | Chr1:8709009-8709028 | MsG0180000615.01.T01:intron | 25.0% |
| !!! | TGAAAAGATAATTTGGTGTA+AGG | - | Chr1:8709536-8709555 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTTTCGGGAAAAA+AGG | - | Chr1:8709300-8709319 | None:intergenic | 25.0% |
| AAGAAAACGATGAAGAGAAA+GGG | - | Chr1:8708343-8708362 | None:intergenic | 30.0% | |
| AAGAAGGGAAATAATAGTTC+CGG | - | Chr1:8709377-8709396 | None:intergenic | 30.0% | |
| AATTCTCTCTAATTAACGCA+GGG | + | Chr1:8711148-8711167 | MsG0180000615.01.T01:three_prime_UTR | 30.0% | |
| ATGTAGAAAGATGTTCATGA+TGG | - | Chr1:8710819-8710838 | None:intergenic | 30.0% | |
| ATTTATCCCACATCATAATC+TGG | + | Chr1:8710789-8710808 | MsG0180000615.01.T01:intron | 30.0% | |
| CAGAGAACATATGCAAAATA+AGG | - | Chr1:8709190-8709209 | None:intergenic | 30.0% | |
| CCAAAACAAAAGAGTGAAAA+AGG | - | Chr1:8708398-8708417 | None:intergenic | 30.0% | |
| CTTTAGATTAAAGACGTCTT+CGG | - | Chr1:8708968-8708987 | None:intergenic | 30.0% | |
| GATTTATTGTGTCACATTGA+TGG | + | Chr1:8708724-8708743 | MsG0180000615.01.T01:intron | 30.0% | |
| GATTTCAATCCAATGATCAT+TGG | - | Chr1:8709694-8709713 | None:intergenic | 30.0% | |
| GTAAATCATGTTGCATTTGT+TGG | + | Chr1:8710756-8710775 | MsG0180000615.01.T01:intron | 30.0% | |
| TAATCAATATCGAAGTGGTT+GGG | + | Chr1:8709729-8709748 | MsG0180000615.01.T01:intron | 30.0% | |
| TAATTAACGCAGGGAAAAAA+AGG | + | Chr1:8711157-8711176 | MsG0180000615.01.T01:three_prime_UTR | 30.0% | |
| TAATTCTCTCTAATTAACGC+AGG | + | Chr1:8711147-8711166 | MsG0180000615.01.T01:three_prime_UTR | 30.0% | |
| TATGAACATTCATTCCTTTG+AGG | - | Chr1:8711129-8711148 | None:intergenic | 30.0% | |
| TGGATATTAGAAGGGATATA+GGG | + | Chr1:8709337-8709356 | MsG0180000615.01.T01:intron | 30.0% | |
| TTAATCAATATCGAAGTGGT+TGG | + | Chr1:8709728-8709747 | MsG0180000615.01.T01:intron | 30.0% | |
| TTAGTAATCCAAAAACGAGA+AGG | - | Chr1:8710489-8710508 | None:intergenic | 30.0% | |
| TTGCAGTCAAGATTAGTAAT+TGG | + | Chr1:8709782-8709801 | MsG0180000615.01.T01:intron | 30.0% | |
| ! | ACGTCTTTAATCTAAAGTGT+TGG | + | Chr1:8708971-8708990 | MsG0180000615.01.T01:intron | 30.0% |
| ! | ACTTGCGCATTTTCTTTTTT+CGG | - | Chr1:8709309-8709328 | None:intergenic | 30.0% |
| ! | ATGGATTACATAAAACACAG+AGG | - | Chr1:8710463-8710482 | None:intergenic | 30.0% |
| ! | GGTGATAACAACTTTATTTG+TGG | + | Chr1:8711196-8711215 | MsG0180000615.01.T01:three_prime_UTR | 30.0% |
| ! | TATTTTGCATATGTTCTCTG+TGG | + | Chr1:8709190-8709209 | MsG0180000615.01.T01:intron | 30.0% |
| !! | AAATGAATTGCTCACTTTTG+AGG | + | Chr1:8709155-8709174 | MsG0180000615.01.T01:intron | 30.0% |
| !! | CCTTTTTCACTCTTTTGTTT+TGG | + | Chr1:8708395-8708414 | MsG0180000615.01.T01:intron | 30.0% |
| !! | TCGTTTTTGGATTACTAATG+TGG | + | Chr1:8710491-8710510 | MsG0180000615.01.T01:intron | 30.0% |
| !! | TGTTGGTGCTACATTATTTA+TGG | + | Chr1:8708988-8709007 | MsG0180000615.01.T01:intron | 30.0% |
| AAGCATGCTAAAATGTTGTC+TGG | + | Chr1:8710731-8710750 | MsG0180000615.01.T01:intron | 35.0% | |
| AGAAGGGAAATAATAGTTCC+GGG | - | Chr1:8709376-8709395 | None:intergenic | 35.0% | |
| AGTTAAATACTCCAGGATAG+CGG | - | Chr1:8710931-8710950 | None:intergenic | 35.0% | |
| ATAAGAGACTTGTGGATATG+AGG | - | Chr1:8711098-8711117 | None:intergenic | 35.0% | |
| ATATTAGAAGGGATATAGGG+TGG | + | Chr1:8709340-8709359 | MsG0180000615.01.T01:intron | 35.0% | |
| ATGCTGTGTTCAATTAGACA+TGG | - | Chr1:8710401-8710420 | None:intergenic | 35.0% | |
| ATTCGCCATGAAACAAAACA+AGG | - | Chr1:8708811-8708830 | None:intergenic | 35.0% | |
| CAAGAAAACGATGAAGAGAA+AGG | - | Chr1:8708344-8708363 | None:intergenic | 35.0% | |
| CACTTTAGCGATGTAACATA+AGG | - | Chr1:8708444-8708463 | None:intergenic | 35.0% | |
| CCACTTGCAAAAAATTCTAG+TGG | - | Chr1:8710664-8710683 | None:intergenic | 35.0% | |
| CTGTCATAACCAATGATCAT+TGG | + | Chr1:8709682-8709701 | MsG0180000615.01.T01:intron | 35.0% | |
| GAAAAAAGAAAATGCGCAAG+TGG | + | Chr1:8709308-8709327 | MsG0180000615.01.T01:intron | 35.0% | |
| GGAAAACCAGATTATGATGT+GGG | - | Chr1:8710798-8710817 | None:intergenic | 35.0% | |
| GTACACCCAAATTTCAATCT+TGG | - | Chr1:8708610-8708629 | None:intergenic | 35.0% | |
| GTGGATATTAGAAGGGATAT+AGG | + | Chr1:8709336-8709355 | MsG0180000615.01.T01:intron | 35.0% | |
| TAAAGCTTGTACAGTGTAAG+CGG | - | Chr1:8709638-8709657 | None:intergenic | 35.0% | |
| TCCAAAAACGAGAAGGAATA+TGG | - | Chr1:8710482-8710501 | None:intergenic | 35.0% | |
| TCTGCATTACTTATTCTGTG+CGG | + | Chr1:8710427-8710446 | MsG0180000615.01.T01:intron | 35.0% | |
| TCTTATCAACAAGTCCTCAA+AGG | + | Chr1:8711112-8711131 | MsG0180000615.01.T01:CDS | 35.0% | |
| TGGAAAACCAGATTATGATG+TGG | - | Chr1:8710799-8710818 | None:intergenic | 35.0% | |
| TTGAATATGGTCACATGTGT+CGG | + | Chr1:8708889-8708908 | MsG0180000615.01.T01:intron | 35.0% | |
| ! | ACTTGTTGATAAGAGACTTG+TGG | - | Chr1:8711106-8711125 | None:intergenic | 35.0% |
| ! | CTTGCGCATTTTCTTTTTTC+GGG | - | Chr1:8709308-8709327 | None:intergenic | 35.0% |
| ! | TCCATATTCCTTCTCGTTTT+TGG | + | Chr1:8710478-8710497 | MsG0180000615.01.T01:intron | 35.0% |
| !!! | CCACTAGAATTTTTTGCAAG+TGG | + | Chr1:8710661-8710680 | MsG0180000615.01.T01:intron | 35.0% |
| !!! | TGTTTTAACTGTCAAGACCA+AGG | - | Chr1:8710210-8710229 | None:intergenic | 35.0% |
| ACACCGCATAGTTAGCTAAT+AGG | + | Chr1:8709562-8709581 | MsG0180000615.01.T01:intron | 40.0% | |
| AGAATCATATGTGAATGGGG+TGG | + | Chr1:8709865-8709884 | MsG0180000615.01.T01:intron | 40.0% | |
| AGATGAAGTATGGGGTAGAA+AGG | + | Chr1:8708572-8708591 | MsG0180000615.01.T01:intron | 40.0% | |
| ATAGCAAGCTGTAGATGTCT+CGG | - | Chr1:8711014-8711033 | None:intergenic | 40.0% | |
| ATCAAAGGAACAATAGCTGG+TGG | + | Chr1:8711062-8711081 | MsG0180000615.01.T01:CDS | 40.0% | |
| ATCCCTTCTAATATCCACCA+AGG | - | Chr1:8709334-8709353 | None:intergenic | 40.0% | |
| ATGACAGTGTGTGCTATCAA+GGG | - | Chr1:8709669-8709688 | None:intergenic | 40.0% | |
| ATGCTTCACTCTCAAACCAA+TGG | + | Chr1:8709805-8709824 | MsG0180000615.01.T01:intron | 40.0% | |
| CAATCAATCAAACCAACGCA+AGG | - | Chr1:8711232-8711251 | None:intergenic | 40.0% | |
| CATATGTTCTCTGTGGTCAT+GGG | + | Chr1:8709197-8709216 | MsG0180000615.01.T01:intron | 40.0% | |
| CCAAAAAAGCAGATTACCAC+TGG | - | Chr1:8710099-8710118 | None:intergenic | 40.0% | |
| CCAAAGATAAGTCACTCACA+TGG | - | Chr1:8710614-8710633 | None:intergenic | 40.0% | |
| CCATGTGAGTGACTTATCTT+TGG | + | Chr1:8710611-8710630 | MsG0180000615.01.T01:intron | 40.0% | |
| CTCATCAAAGGAACAATAGC+TGG | + | Chr1:8711059-8711078 | MsG0180000615.01.T01:CDS | 40.0% | |
| CTGCCTATTAGCTAACTATG+CGG | - | Chr1:8709568-8709587 | None:intergenic | 40.0% | |
| CTTGACTGCAACGTAAAAGA+TGG | - | Chr1:8709773-8709792 | None:intergenic | 40.0% | |
| GAACTTGACACTCTCATCAA+AGG | + | Chr1:8711047-8711066 | MsG0180000615.01.T01:CDS | 40.0% | |
| GATGAAGAGAAAGGGTAAGA+GGG | - | Chr1:8708335-8708354 | None:intergenic | 40.0% | |
| TATGACAGTGTGTGCTATCA+AGG | - | Chr1:8709670-8709689 | None:intergenic | 40.0% | |
| TATTAGCTAACTATGCGGTG+TGG | - | Chr1:8709563-8709582 | None:intergenic | 40.0% | |
| TCTTCTTGTCCTTGTCTTTG+AGG | - | Chr1:8708263-8708282 | None:intergenic | 40.0% | |
| TGCTTCATCCACATGTGTTA+CGG | + | Chr1:8710582-8710601 | MsG0180000615.01.T01:intron | 40.0% | |
| TGTCAAGTTCTTCATCTCCA+CGG | - | Chr1:8711037-8711056 | None:intergenic | 40.0% | |
| TTCTACATACAGTTCCCTGT+CGG | + | Chr1:8710831-8710850 | MsG0180000615.01.T01:intron | 40.0% | |
| TTGGACTTCTAACAGAGACT+AGG | + | Chr1:8709028-8709047 | MsG0180000615.01.T01:intron | 40.0% | |
| ! | CATAATCTTTTGTGGTCCAG+TGG | + | Chr1:8710080-8710099 | MsG0180000615.01.T01:intron | 40.0% |
| ! | CTTCGGTGTAAAACATGTGA+TGG | - | Chr1:8708951-8708970 | None:intergenic | 40.0% |
| ! | GTATTTAACTGCAGAGGTGT+TGG | + | Chr1:8710941-8710960 | MsG0180000615.01.T01:CDS | 40.0% |
| !! | ACATTGATGGTGTCTTTGGA+AGG | + | Chr1:8708737-8708756 | MsG0180000615.01.T01:intron | 40.0% |
| !! | AGCTTGGATGGTTTTTCAGA+GGG | - | Chr1:8710306-8710325 | None:intergenic | 40.0% |
| !! | ATTGATGGTGTCTTTGGAAG+GGG | + | Chr1:8708739-8708758 | MsG0180000615.01.T01:intron | 40.0% |
| !! | CATTGATGGTGTCTTTGGAA+GGG | + | Chr1:8708738-8708757 | MsG0180000615.01.T01:intron | 40.0% |
| !! | TCTTCTGAAGTCAAGGACAA+TGG | + | Chr1:8710866-8710885 | MsG0180000615.01.T01:CDS | 40.0% |
| !! | TGTCACATTGATGGTGTCTT+TGG | + | Chr1:8708733-8708752 | MsG0180000615.01.T01:intron | 40.0% |
| !!! | CCAGTGGTAATCTGCTTTTT+TGG | + | Chr1:8710096-8710115 | MsG0180000615.01.T01:intron | 40.0% |
| !!! | CTGCTTTTTTGGTTCCTATG+AGG | + | Chr1:8710107-8710126 | MsG0180000615.01.T01:intron | 40.0% |
| AAAGGAACAATAGCTGGTGG+TGG | + | Chr1:8711065-8711084 | MsG0180000615.01.T01:CDS | 45.0% | |
| AAAGTGCAGCCTGACATGAA+AGG | + | Chr1:8710524-8710543 | MsG0180000615.01.T01:intron | 45.0% | |
| AAGTCAAGGACAATGGCACA+TGG | + | Chr1:8710873-8710892 | MsG0180000615.01.T01:CDS | 45.0% | |
| AATATCGAAGTGGTTGGGTG+GGG | + | Chr1:8709734-8709753 | MsG0180000615.01.T01:intron | 45.0% | |
| AATGGCACATGGAAGAGTTG+GGG | + | Chr1:8710884-8710903 | MsG0180000615.01.T01:CDS | 45.0% | |
| ACAATGGCACATGGAAGAGT+TGG | + | Chr1:8710882-8710901 | MsG0180000615.01.T01:CDS | 45.0% | |
| ACCAGCAAACCTCAAAGACA+AGG | + | Chr1:8708251-8708270 | MsG0180000615.01.T01:CDS | 45.0% | |
| ACTCGAGCTTCTATCCTCAT+AGG | - | Chr1:8710124-8710143 | None:intergenic | 45.0% | |
| AGGGAAATAATAGTTCCGGG+AGG | - | Chr1:8709373-8709392 | None:intergenic | 45.0% | |
| AGTTTATTCTGCCGCTATCC+TGG | + | Chr1:8710917-8710936 | MsG0180000615.01.T01:CDS | 45.0% | |
| ATTCGGTTTAGCGCATTCGT+GGG | - | Chr1:8709446-8709465 | None:intergenic | 45.0% | |
| CAATATCGAAGTGGTTGGGT+GGG | + | Chr1:8709733-8709752 | MsG0180000615.01.T01:intron | 45.0% | |
| CAATGCAAGCAAGGATCTGA+AGG | + | Chr1:8710974-8710993 | MsG0180000615.01.T01:CDS | 45.0% | |
| CAATGGCACATGGAAGAGTT+GGG | + | Chr1:8710883-8710902 | MsG0180000615.01.T01:CDS | 45.0% | |
| CACATTGCTCACCTTATCAG+TGG | - | Chr1:8710332-8710351 | None:intergenic | 45.0% | |
| CCTCTGCAGTTAAATACTCC+AGG | - | Chr1:8710938-8710957 | None:intergenic | 45.0% | |
| CGATGAAGAGAAAGGGTAAG+AGG | - | Chr1:8708336-8708355 | None:intergenic | 45.0% | |
| GCATATGTTCTCTGTGGTCA+TGG | + | Chr1:8709196-8709215 | MsG0180000615.01.T01:intron | 45.0% | |
| GGGAAATAATAGTTCCGGGA+GGG | - | Chr1:8709372-8709391 | None:intergenic | 45.0% | |
| GTTTCATGGCGAATGATACG+CGG | + | Chr1:8708817-8708836 | MsG0180000615.01.T01:intron | 45.0% | |
| TCAATATCGAAGTGGTTGGG+TGG | + | Chr1:8709732-8709751 | MsG0180000615.01.T01:intron | 45.0% | |
| TCCTTGACTTCAGAAGACGA+TGG | - | Chr1:8710863-8710882 | None:intergenic | 45.0% | |
| TGCAGCTTCTGGTAAGTCAT+CGG | + | Chr1:8710548-8710567 | MsG0180000615.01.T01:intron | 45.0% | |
| TGTTGATGTGAGTCGAACCT+TGG | + | Chr1:8710190-8710209 | MsG0180000615.01.T01:intron | 45.0% | |
| ! | AAGCGGCGAGTTGTTGATAA+CGG | - | Chr1:8709621-8709640 | None:intergenic | 45.0% |
| ! | CCTGGAGTATTTAACTGCAG+AGG | + | Chr1:8710935-8710954 | MsG0180000615.01.T01:CDS | 45.0% |
| ! | GGCCTTGGTGGATATTAGAA+GGG | + | Chr1:8709329-8709348 | MsG0180000615.01.T01:intron | 45.0% |
| ! | TCATGTCAGGCTGCACTTTT+TGG | - | Chr1:8710523-8710542 | None:intergenic | 45.0% |
| ! | TGGCCTTGGTGGATATTAGA+AGG | + | Chr1:8709328-8709347 | MsG0180000615.01.T01:intron | 45.0% |
| !! | CTTGGATGGTTTTTCAGAGG+GGG | - | Chr1:8710304-8710323 | None:intergenic | 45.0% |
| !! | GAGCTTGGATGGTTTTTCAG+AGG | - | Chr1:8710307-8710326 | None:intergenic | 45.0% |
| !! | GCTTGGATGGTTTTTCAGAG+GGG | - | Chr1:8710305-8710324 | None:intergenic | 45.0% |
| !! | TCCATCGTCTTCTGAAGTCA+AGG | + | Chr1:8710859-8710878 | MsG0180000615.01.T01:CDS | 45.0% |
| !! | TCCTTGTCTTTGAGGTTTGC+TGG | - | Chr1:8708255-8708274 | None:intergenic | 45.0% |
| !! | TGAATGGGGTGGATTAGTGT+GGG | + | Chr1:8709876-8709895 | MsG0180000615.01.T01:intron | 45.0% |
| !!! | GAGGTTTGCTGGTGTTTTAC+CGG | - | Chr1:8708244-8708263 | None:intergenic | 45.0% |
| AACCTGAAGACCAGCTCTTG+AGG | - | Chr1:8708301-8708320 | None:intergenic | 50.0% | |
| AAGCTGCAGCCTTTCATGTC+AGG | - | Chr1:8710536-8710555 | None:intergenic | 50.0% | |
| ACATCTCGTTCCTCAAGAGC+TGG | + | Chr1:8708288-8708307 | MsG0180000615.01.T01:CDS | 50.0% | |
| ACATGAAAGGCTGCAGCTTC+TGG | + | Chr1:8710537-8710556 | MsG0180000615.01.T01:intron | 50.0% | |
| ACCTTATCAGTGGCAGAGCT+TGG | - | Chr1:8710322-8710341 | None:intergenic | 50.0% | |
| AGAAAATGCGCAAGTGGCCT+TGG | + | Chr1:8709314-8709333 | MsG0180000615.01.T01:intron | 50.0% | |
| AGCTCTTGAGGAACGAGATG+TGG | - | Chr1:8708289-8708308 | None:intergenic | 50.0% | |
| ATATCGAAGTGGTTGGGTGG+GGG | + | Chr1:8709735-8709754 | MsG0180000615.01.T01:intron | 50.0% | |
| CACGAATGCGCTAAACCGAA+TGG | + | Chr1:8709445-8709464 | MsG0180000615.01.T01:intron | 50.0% | |
| CAGTGTGTGCTATCAAGGGA+TGG | - | Chr1:8709665-8709684 | None:intergenic | 50.0% | |
| CATTCGGTTTAGCGCATTCG+TGG | - | Chr1:8709447-8709466 | None:intergenic | 50.0% | |
| GCTCTTGAGGAACGAGATGT+GGG | - | Chr1:8708288-8708307 | None:intergenic | 50.0% | |
| GGATAATTCGCTCCTTGCGT+TGG | + | Chr1:8711217-8711236 | MsG0180000615.01.T01:three_prime_UTR | 50.0% | |
| TAATAGTTCCGGGAGGGCTA+TGG | - | Chr1:8709366-8709385 | None:intergenic | 50.0% | |
| TATCAGTGGCAGAGCTTGGA+TGG | - | Chr1:8710318-8710337 | None:intergenic | 50.0% | |
| TCCAAGCTCTGCCACTGATA+AGG | + | Chr1:8710318-8710337 | MsG0180000615.01.T01:intron | 50.0% | |
| TTCGGTTTAGCGCATTCGTG+GGG | - | Chr1:8709445-8709464 | None:intergenic | 50.0% | |
| !! | AACTGCAGAGGTGTTGGAGT+TGG | + | Chr1:8710947-8710966 | MsG0180000615.01.T01:CDS | 50.0% |
| !! | ACATGTGTCGGTGTTGTGTC+AGG | + | Chr1:8708901-8708920 | MsG0180000615.01.T01:intron | 50.0% |
| !! | CATCTACAGCTTGCTATCCG+TGG | + | Chr1:8711017-8711036 | MsG0180000615.01.T01:CDS | 50.0% |
| !! | CATGTGTCGGTGTTGTGTCA+GGG | + | Chr1:8708902-8708921 | MsG0180000615.01.T01:intron | 50.0% |
| !! | GTGAATGGGGTGGATTAGTG+TGG | + | Chr1:8709875-8709894 | MsG0180000615.01.T01:intron | 50.0% |
| !! | TTCCTCAAGAGCTGGTCTTC+AGG | + | Chr1:8708296-8708315 | MsG0180000615.01.T01:CDS | 50.0% |
| AGACGATGGATACGTCCGAC+AGG | - | Chr1:8710849-8710868 | None:intergenic | 55.0% | |
| ATGTCGGGGAAAGGAGCGAA+GGG | + | Chr1:8708210-8708229 | MsG0180000615.01.T01:CDS | 55.0% | |
| GACGATGGATACGTCCGACA+GGG | - | Chr1:8710848-8710867 | None:intergenic | 55.0% | |
| GGAGCGAAGGGTTTGACAAC+CGG | + | Chr1:8708222-8708241 | MsG0180000615.01.T01:CDS | 55.0% | |
| GGCTGTAGCCGTAACACATG+TGG | - | Chr1:8710593-8710612 | None:intergenic | 55.0% | |
| GTTGGCTGGCAATGCAAGCA+AGG | + | Chr1:8710965-8710984 | MsG0180000615.01.T01:CDS | 55.0% | |
| TCGGTTTAGCGCATTCGTGG+GGG | - | Chr1:8709444-8709463 | None:intergenic | 55.0% | |
| ! | AAATGCGCAAGTGGCCTTGG+TGG | + | Chr1:8709317-8709336 | MsG0180000615.01.T01:intron | 55.0% |
| !! | CGGCGAGTTGTTGATAACGG+TGG | - | Chr1:8709618-8709637 | None:intergenic | 55.0% |
| !! | TGTCGGTGTTGTGTCAGGGT+TGG | + | Chr1:8708906-8708925 | MsG0180000615.01.T01:intron | 55.0% |
| !! | GCAGAGGTGTTGGAGTTGGC+TGG | + | Chr1:8710951-8710970 | MsG0180000615.01.T01:CDS | 60.0% |
| TAGGGTGGCCATAGCCCTCC+CGG | + | Chr1:8709355-8709374 | MsG0180000615.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 8708210 | 8711270 | 8708210 | ID=MsG0180000615.01;Name=MsG0180000615.01 |
| Chr1 | mRNA | 8708210 | 8711270 | 8708210 | ID=MsG0180000615.01.T01;Parent=MsG0180000615.01;Name=MsG0180000615.01.T01;_AED=0.47;_eAED=0.48;_QI=0|0|0.5|1|1|1|2|131|134 |
| Chr1 | exon | 8710843 | 8711270 | 8710843 | ID=MsG0180000615.01.T01:exon:2295;Parent=MsG0180000615.01.T01 |
| Chr1 | exon | 8708210 | 8708317 | 8708210 | ID=MsG0180000615.01.T01:exon:2294;Parent=MsG0180000615.01.T01 |
| Chr1 | CDS | 8708210 | 8708317 | 8708210 | ID=MsG0180000615.01.T01:cds;Parent=MsG0180000615.01.T01 |
| Chr1 | CDS | 8710843 | 8711139 | 8710843 | ID=MsG0180000615.01.T01:cds;Parent=MsG0180000615.01.T01 |
| Chr1 | three_prime_UTR | 8711140 | 8711270 | 8711140 | ID=MsG0180000615.01.T01:three_prime_utr;Parent=MsG0180000615.01.T01 |
| Gene Sequence |
| Protein sequence |
