Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048135.01.T01 | XP_013459291.1 | 91.5 | 200 | 14 | 2 | 1 | 198 | 1 | 199 | 4.28E-112 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048135.01.T01 | Q8L557 | 51.531 | 196 | 61 | 5 | 1 | 189 | 1 | 169 | 6.15E-47 | 157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048135.01.T01 | A0A072UUN0 | 91.500 | 200 | 14 | 2 | 1 | 198 | 1 | 199 | 2.05e-112 | 331 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048135.01 | MsG0080049013.01 | -0.805534 | 1.274689e-49 | 6.760098e-47 |
| MsG0080048135.01 | MsG0180000139.01 | 0.816772 | 4.655382e-52 | 3.328993e-49 |
| MsG0080048135.01 | MsG0180000365.01 | -0.809563 | 1.779169e-50 | 1.048084e-47 |
| MsG0080048135.01 | MsG0180000456.01 | 0.804313 | 2.293525e-49 | 1.178751e-46 |
| MsG0080048135.01 | MsG0180000575.01 | 0.846706 | 1.834665e-59 | 3.185733e-56 |
| MsG0080048135.01 | MsG0180000614.01 | 0.872263 | 3.636468e-67 | 1.511874e-63 |
| MsG0080048135.01 | MsG0180000615.01 | 0.866273 | 3.215572e-65 | 1.077544e-61 |
| MsG0080048135.01 | MsG0180000743.01 | 0.843339 | 1.489405e-58 | 2.323305e-55 |
| MsG0080048135.01 | MsG0180001141.01 | 0.824260 | 8.885764e-54 | 7.830340e-51 |
| MsG0080048135.01 | MsG0180001213.01 | 0.809452 | 1.878936e-50 | 1.103574e-47 |
| MsG0080048135.01 | MsG0180002458.01 | 0.884497 | 1.823929e-71 | 1.205890e-67 |
| MsG0080048135.01 | MsG0180003113.01 | 0.812301 | 4.542779e-51 | 2.877760e-48 |
| MsG0080048135.01 | MsG0180003117.01 | 0.833297 | 5.782523e-56 | 6.631309e-53 |
| MsG0080048135.01 | MsG0180003302.01 | 0.810750 | 9.869128e-51 | 5.998892e-48 |
| MsG0080048135.01 | MsG0180003793.01 | 0.820707 | 5.948159e-53 | 4.741600e-50 |
| MsG0080048135.01 | MsG0180003854.01 | 0.802381 | 5.763044e-49 | 2.819125e-46 |
| MsG0080048135.01 | MsG0180004130.01 | 0.807212 | 5.642955e-50 | 3.124663e-47 |
| MsG0080048135.01 | MsG0180004152.01 | 0.805264 | 1.451597e-49 | 7.645195e-47 |
| MsG0080048135.01 | MsG0180004481.01 | 0.806153 | 9.444667e-50 | 5.089241e-47 |
| MsG0080048135.01 | MsG0180004482.01 | 0.801827 | 7.492971e-49 | 3.613794e-46 |
| MsG0080048135.01 | MsG0180004509.01 | 0.848232 | 6.989577e-60 | 1.274070e-56 |
| MsG0080048135.01 | MsG0180004854.01 | 0.807595 | 4.680695e-50 | 2.617581e-47 |
| MsG0080048135.01 | MsG0180005426.01 | 0.805358 | 1.387102e-49 | 7.323622e-47 |
| MsG0080048135.01 | MsG0180005659.01 | 0.825002 | 5.942537e-54 | 5.350145e-51 |
| MsG0080048135.01 | MsG0180005851.01 | 0.874629 | 5.818306e-68 | 2.637614e-64 |
| MsG0080048135.01 | MsG0180005993.01 | 0.808500 | 3.004774e-50 | 1.720858e-47 |
| MsG0080048135.01 | MsG0180006013.01 | 0.804539 | 2.058083e-49 | 1.063885e-46 |
| MsG0080048135.01 | MsG0180006082.01 | 0.839929 | 1.181033e-57 | 1.655963e-54 |
| MsG0080048135.01 | MsG0280006406.01 | 0.846232 | 2.471291e-59 | 4.225057e-56 |
| MsG0080048135.01 | MsG0280006422.01 | 0.859778 | 3.267468e-63 | 8.730895e-60 |
| MsG0080048135.01 | MsG0280006424.01 | 0.838839 | 2.265981e-57 | 3.072283e-54 |
| MsG0080048135.01 | MsG0280007222.01 | 0.878149 | 3.546414e-69 | 1.831528e-65 |
| MsG0080048135.01 | MsG0280009375.01 | 0.812715 | 3.687646e-51 | 2.361826e-48 |
| MsG0080048135.01 | MsG0280009716.01 | 0.824068 | 9.862142e-54 | 8.643745e-51 |
| MsG0080048135.01 | MsG0280010258.01 | 0.802210 | 6.251026e-49 | 3.044223e-46 |
| MsG0080048135.01 | MsG0280010383.01 | 0.879552 | 1.135472e-69 | 6.181287e-66 |
| MsG0080048135.01 | MsG0380011659.01 | 0.843358 | 1.472215e-58 | 2.297709e-55 |
| MsG0080048135.01 | MsG0380012073.01 | 0.808546 | 2.936731e-50 | 1.683906e-47 |
| MsG0080048135.01 | MsG0380012108.01 | 0.848926 | 4.489071e-60 | 8.370251e-57 |
| MsG0080048135.01 | MsG0380012566.01 | 0.888060 | 8.252374e-73 | 6.293897e-69 |
| MsG0080048135.01 | MsG0380013178.01 | 0.858275 | 9.215376e-63 | 2.339058e-59 |
| MsG0080048135.01 | MsG0380014647.01 | 0.874774 | 5.190735e-68 | 2.365943e-64 |
| MsG0080048135.01 | MsG0380015027.01 | 0.843802 | 1.119778e-58 | 1.772040e-55 |
| MsG0080048135.01 | MsG0380015164.01 | 0.832914 | 7.201178e-56 | 8.163822e-53 |
| MsG0080048135.01 | MsG0380015671.01 | 0.800327 | 1.518238e-48 | 7.049667e-46 |
| MsG0080048135.01 | MsG0380016860.01 | 0.809068 | 2.271810e-50 | 1.320709e-47 |
| MsG0080048135.01 | MsG0380016906.01 | 0.805118 | 1.557697e-49 | 8.173627e-47 |
| MsG0080048135.01 | MsG0380017382.01 | 0.806416 | 8.312434e-50 | 4.509158e-47 |
| MsG0080048135.01 | MsG0380017998.01 | 0.808006 | 3.828558e-50 | 2.164291e-47 |
| MsG0080048135.01 | MsG0480018477.01 | 0.829147 | 6.056297e-55 | 6.145543e-52 |
| MsG0080048135.01 | MsG0480018894.01 | 0.805720 | 1.164884e-49 | 6.207991e-47 |
| MsG0080048135.01 | MsG0480021448.01 | 0.860238 | 2.374155e-63 | 6.445183e-60 |
| MsG0080048135.01 | MsG0480021451.01 | 0.869184 | 3.744710e-66 | 1.392623e-62 |
| MsG0080048135.01 | MsG0480021453.01 | 0.879669 | 1.031799e-69 | 5.643254e-66 |
| MsG0080048135.01 | MsG0480021904.01 | 0.812074 | 5.090727e-51 | 3.205056e-48 |
| MsG0080048135.01 | MsG0480021994.01 | 0.809720 | 1.645841e-50 | 9.736225e-48 |
| MsG0080048135.01 | MsG0480022052.01 | -0.806484 | 8.042394e-50 | 4.370359e-47 |
| MsG0080048135.01 | MsG0480022164.01 | 0.855849 | 4.786794e-62 | 1.120336e-58 |
| MsG0080048135.01 | MsG0480022252.01 | 0.824443 | 8.047539e-54 | 7.128928e-51 |
| MsG0080048135.01 | MsG0480022795.01 | 0.864059 | 1.596100e-64 | 4.944690e-61 |
| MsG0080048135.01 | MsG0480022836.01 | 0.808285 | 3.337966e-50 | 1.900984e-47 |
| MsG0080048135.01 | MsG0480022965.01 | 0.803671 | 3.119191e-49 | 1.576819e-46 |
| MsG0080048135.01 | MsG0480023399.01 | 0.865935 | 4.116519e-65 | 1.362999e-61 |
| MsG0080048135.01 | MsG0480023968.01 | 0.841807 | 3.797632e-58 | 5.644160e-55 |
| MsG0080048135.01 | MsG0580024390.01 | 0.844296 | 8.253767e-59 | 1.326579e-55 |
| MsG0080048135.01 | MsG0580024874.01 | 0.803753 | 2.999522e-49 | 1.519577e-46 |
| MsG0080048135.01 | MsG0580025409.01 | 0.802298 | 5.995212e-49 | 2.926428e-46 |
| MsG0080048135.01 | MsG0580025421.01 | 0.823271 | 1.515160e-53 | 1.298432e-50 |
| MsG0080048135.01 | MsG0580027043.01 | 0.810163 | 1.321158e-50 | 7.906401e-48 |
| MsG0080048135.01 | MsG0680030285.01 | 0.859500 | 3.962351e-63 | 1.048656e-59 |
| MsG0080048135.01 | MsG0680031628.01 | 0.839670 | 1.379073e-57 | 1.917968e-54 |
| MsG0080048135.01 | MsG0680032430.01 | 0.850934 | 1.231156e-60 | 2.451349e-57 |
| MsG0080048135.01 | MsG0680032770.01 | 0.815604 | 8.489800e-52 | 5.880351e-49 |
| MsG0080048135.01 | MsG0680033646.01 | 0.801687 | 8.005788e-49 | 3.847275e-46 |
| MsG0080048135.01 | MsG0680035704.01 | 0.821640 | 3.626548e-53 | 2.967098e-50 |
| MsG0080048135.01 | MsG0780036546.01 | 0.857208 | 1.909025e-62 | 4.675353e-59 |
| MsG0080048135.01 | MsG0780036547.01 | 0.823383 | 1.426363e-53 | 1.226136e-50 |
| MsG0080048135.01 | MsG0780036705.01 | 0.815373 | 9.559043e-52 | 6.578774e-49 |
| MsG0080048135.01 | MsG0780038400.01 | 0.849973 | 2.291626e-60 | 4.421058e-57 |
| MsG0080048135.01 | MsG0780038640.01 | 0.895411 | 9.833498e-76 | 1.019161e-71 |
| MsG0080048135.01 | MsG0780038645.01 | 0.865029 | 7.939999e-65 | 2.546519e-61 |
| MsG0080048135.01 | MsG0780039844.01 | 0.835477 | 1.640199e-56 | 2.008028e-53 |
| MsG0080048135.01 | MsG0780041295.01 | 0.862015 | 6.833226e-64 | 1.971537e-60 |
| MsG0080048135.01 | MsG0780041402.01 | 0.833883 | 4.127629e-56 | 4.817694e-53 |
| MsG0080048135.01 | MsG0780041462.01 | 0.844329 | 8.088304e-59 | 1.301327e-55 |
| MsG0080048135.01 | MsG0780041519.01 | 0.820370 | 7.110028e-53 | 5.615308e-50 |
| MsG0080048135.01 | MsG0780041559.01 | 0.850053 | 2.177388e-60 | 4.212070e-57 |
| MsG0080048135.01 | MsG0880041967.01 | 0.810066 | 1.386284e-50 | 8.275361e-48 |
| MsG0080048135.01 | MsG0880042294.01 | 0.813386 | 2.627662e-51 | 1.713617e-48 |
| MsG0080048135.01 | MsG0880042779.01 | 0.856931 | 2.304341e-62 | 5.590266e-59 |
| MsG0080048135.01 | MsG0880046126.01 | 0.801399 | 9.171097e-49 | 4.375334e-46 |
| MsG0080048135.01 | MsG0880046177.01 | 0.801161 | 1.026118e-48 | 4.866333e-46 |
| MsG0080048135.01 | MsG0880046285.01 | 0.811128 | 8.173381e-51 | 5.018234e-48 |
| MsG0080048135.01 | MsG0880046321.01 | 0.832615 | 8.546398e-56 | 9.603019e-53 |
| MsG0080048135.01 | MsG0880046328.01 | 0.835289 | 1.829833e-56 | 2.227865e-53 |
| MsG0080048135.01 | MsG0880046449.01 | 0.859840 | 3.129725e-63 | 8.381582e-60 |
| MsG0080048135.01 | MsG0880046575.01 | 0.845359 | 4.266211e-59 | 7.091602e-56 |
| MsG0080048135.01 | MsG0880046631.01 | 0.839472 | 1.552483e-57 | 2.146224e-54 |
| MsG0080048135.01 | MsG0880046933.01 | 0.815239 | 1.023646e-51 | 7.018578e-49 |
| MsG0080048135.01 | MsG0880047038.01 | 0.827712 | 1.344431e-54 | 1.308298e-51 |
| MsG0080048135.01 | MsG0880047286.01 | 0.826852 | 2.160695e-54 | 2.050442e-51 |
| MsG0080048135.01 | MsG0880047427.01 | 0.876492 | 1.338140e-68 | 6.501323e-65 |
| MsG0080048135.01 | MsG0880047448.01 | 0.898396 | 5.526065e-77 | 6.518889e-73 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048135.01.T01 | MTR_3g435580 | 91.500 | 200 | 14 | 2 | 1 | 198 | 1 | 199 | 5.19e-116 | 331 |
| MsG0080048135.01.T01 | MTR_2g094530 | 75.385 | 130 | 13 | 3 | 3 | 132 | 26 | 136 | 2.37e-50 | 161 |
| MsG0080048135.01.T01 | MTR_0140s0050 | 45.771 | 201 | 72 | 7 | 1 | 198 | 1 | 167 | 4.11e-39 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048135.01.T01 | AT5G62440 | 51.531 | 196 | 61 | 5 | 1 | 189 | 1 | 169 | 6.27e-48 | 157 |
| MsG0080048135.01.T01 | AT5G62440 | 57.857 | 140 | 43 | 1 | 80 | 219 | 60 | 183 | 1.44e-47 | 156 |
Find 99 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTTGATAATTATGATTT+TGG | 0.139346 | contig217end:+16806 | MsG0080048135.01.T01:three_prime_UTR |
| CGAAACGACGTCGTCGTCTT+TGG | 0.180092 | contig217end:-15025 | MsG0080048135.01.T01:intergenic |
| AGCATCTGGTGATGTGAATT+TGG | 0.223878 | contig217end:+15140 | MsG0080048135.01.T01:CDS |
| GTGTTGGGATCGACGATTTC+GGG | 0.230510 | contig217end:-14913 | MsG0080048135.01.T01:intergenic |
| TTCTTCTGCCATTAGGGTTT+TGG | 0.233048 | contig217end:-14884 | MsG0080048135.01.T01:intergenic |
| TTTATAATTTATGAAAGTTT+TGG | 0.235443 | contig217end:+16840 | MsG0080048135.01.T01:three_prime_UTR |
| CAAAACGTTTGGTTCTTCTT+TGG | 0.240104 | contig217end:+15167 | MsG0080048135.01.T01:CDS |
| GGGCGGTTTCTTCTGCCATT+AGG | 0.241134 | contig217end:-14891 | MsG0080048135.01.T01:intergenic |
| GATTTCAATTGCATCTCTTC+TGG | 0.274351 | contig217end:-16564 | MsG0080048135.01.T01:intergenic |
| GGCGGTTTCTTCTGCCATTA+GGG | 0.278484 | contig217end:-14890 | MsG0080048135.01.T01:intergenic |
| GGCAGAGGAAGGGGTGGAAG+AGG | 0.288084 | contig217end:+16645 | MsG0080048135.01.T01:CDS |
| GAAACGACGTCGTCGTCTTT+GGG | 0.315284 | contig217end:-15024 | MsG0080048135.01.T01:intergenic |
| AGAAGAAAGGTTGGAGAAGT+TGG | 0.318089 | contig217end:+15083 | MsG0080048135.01.T01:CDS |
| GGTGGTGGAGGAAAGCATTA+TGG | 0.319668 | contig217end:+16612 | MsG0080048135.01.T01:CDS |
| CAAAGAAGAACCAAACGTTT+TGG | 0.321184 | contig217end:-15166 | MsG0080048135.01.T01:intergenic |
| GGTGGTGGTGGTCGTGGAAG+AGG | 0.332339 | contig217end:+16678 | MsG0080048135.01.T01:CDS |
| GGTGTTGGGATCGACGATTT+CGG | 0.341361 | contig217end:-14914 | MsG0080048135.01.T01:intergenic |
| CCTACGCCAATCTTTCTAAC+AGG | 0.362195 | contig217end:-16417 | MsG0080048135.01.T01:intergenic |
| GGAAATGGTGGCAGAGGAAG+GGG | 0.363172 | contig217end:+16636 | MsG0080048135.01.T01:CDS |
| CACACAACCATTTCAGTTTG+TGG | 0.369032 | contig217end:-16906 | MsG0080048135.01.T01:intergenic |
| AGCGAGGGTGGTCGCGAACT+TGG | 0.371048 | contig217end:-16452 | MsG0080048135.01.T01:intergenic |
| ACTCCCAACTATCCCAATCT+AGG | 0.371991 | contig217end:+14847 | MsG0080048135.01.T01:five_prime_UTR |
| GTAGGTGCTATTTCCTCATC+AGG | 0.377430 | contig217end:+16481 | MsG0080048135.01.T01:CDS |
| GAAATTGTAAAACCCTAGAT+TGG | 0.380755 | contig217end:-14860 | MsG0080048135.01.T01:intergenic |
| GGTGGCGGCGACGGTGGTGT+TGG | 0.382999 | contig217end:-14929 | MsG0080048135.01.T01:intergenic |
| TTATATGATCCACACACTTT+CGG | 0.387200 | contig217end:-16533 | MsG0080048135.01.T01:intergenic |
| AAATTGATTACAATAGTTAC+TGG | 0.392191 | contig217end:+16713 | MsG0080048135.01.T01:exon |
| TTCACAAATTTCTTCATGCT+TGG | 0.392802 | contig217end:+15205 | MsG0080048135.01.T01:CDS |
| AACAAGAAGTTTGGTGGTGG+TGG | 0.393287 | contig217end:+16594 | MsG0080048135.01.T01:CDS |
| AGAGTTATTATTAAATGATT+CGG | 0.405519 | contig217end:+16935 | MsG0080048135.01.T01:three_prime_UTR |
| TGGCGCGGTGGTGGTGGTCG+TGG | 0.406520 | contig217end:+16672 | MsG0080048135.01.T01:CDS |
| CAATTTCTCCAAAACCCTAA+TGG | 0.406994 | contig217end:+14876 | MsG0080048135.01.T01:exon |
| GTGGCGGCGACGGTGGTGTT+GGG | 0.407049 | contig217end:-14928 | MsG0080048135.01.T01:intergenic |
| AAGAAGTTTGGTGGTGGTGG+TGG | 0.407943 | contig217end:+16597 | MsG0080048135.01.T01:CDS |
| GCAGAACCTGTTAGAAAGAT+TGG | 0.413902 | contig217end:+16411 | MsG0080048135.01.T01:CDS |
| AGAGGAGGTTGGCGCGGTGG+TGG | 0.415258 | contig217end:+16663 | MsG0080048135.01.T01:CDS |
| GGAGGTTGGCGCGGTGGTGG+TGG | 0.415283 | contig217end:+16666 | MsG0080048135.01.T01:CDS |
| ATCAGTGGAAGAAGAAAGGT+TGG | 0.420672 | contig217end:+15074 | MsG0080048135.01.T01:CDS |
| GTGGTGGTGGTCGTGGAAGA+GGG | 0.421362 | contig217end:+16679 | MsG0080048135.01.T01:CDS |
| AACCCTAGATTGGGATAGTT+GGG | 0.421427 | contig217end:-14850 | MsG0080048135.01.T01:intergenic |
| TGGTGGTGGTCGTGGAAGAG+GGG | 0.421459 | contig217end:+16680 | MsG0080048135.01.T01:CDS |
| GAGGAAATGGTGGCAGAGGA+AGG | 0.430070 | contig217end:+16634 | MsG0080048135.01.T01:CDS |
| AAACCCTAGATTGGGATAGT+TGG | 0.432481 | contig217end:-14851 | MsG0080048135.01.T01:intergenic |
| GGTGGTGGTCGTGGAAGAGG+GGG | 0.437353 | contig217end:+16681 | MsG0080048135.01.T01:CDS |
| GGAAGAGGAGGTTGGCGCGG+TGG | 0.438451 | contig217end:+16660 | MsG0080048135.01.T01:CDS |
| GGAAAGCATTATGGAGGAAA+TGG | 0.440043 | contig217end:+16621 | MsG0080048135.01.T01:CDS |
| AATTTGGGACCCAAAACGTT+TGG | 0.448596 | contig217end:+15156 | MsG0080048135.01.T01:CDS |
| AAACGTACCACAAACTGAAA+TGG | 0.448793 | contig217end:+16899 | MsG0080048135.01.T01:three_prime_UTR |
| GTGTTCGTGGCTTTGTTCGT+GGG | 0.450487 | contig217end:-14826 | MsG0080048135.01.T01:intergenic |
| AACTTCCATGTCTACGGTGG+CGG | 0.451314 | contig217end:-14944 | MsG0080048135.01.T01:intergenic |
| TCTGAGGGGAACAAGAAGTT+TGG | 0.454847 | contig217end:+16585 | MsG0080048135.01.T01:CDS |
| AGAGGAAGGGGTGGAAGAGG+AGG | 0.464178 | contig217end:+16648 | MsG0080048135.01.T01:CDS |
| CATGTCTACGGTGGCGGCGA+CGG | 0.465197 | contig217end:-14938 | MsG0080048135.01.T01:intergenic |
| GCATCTGGTGATGTGAATTT+GGG | 0.465518 | contig217end:+15141 | MsG0080048135.01.T01:CDS |
| AAAGAAGAAAAGGAAGCATC+TGG | 0.469819 | contig217end:+15126 | MsG0080048135.01.T01:CDS |
| GGGATAGTTGGGAGTGTTCG+TGG | 0.472155 | contig217end:-14839 | MsG0080048135.01.T01:intergenic |
| CTTTGTTCGTGGGTCTGACT+CGG | 0.476149 | contig217end:-14816 | MsG0080048135.01.T01:intergenic |
| GTATGAGCACACGATGTTGC+TGG | 0.478639 | contig217end:+16368 | MsG0080048135.01.T01:intron |
| CGACGACGTCGTTTCGAAGA+AGG | 0.482849 | contig217end:+15032 | MsG0080048135.01.T01:CDS |
| CAATTGCATCTCTTCTGGCA+AGG | 0.483061 | contig217end:-16559 | MsG0080048135.01.T01:intergenic |
| GGTGGAAGAGGAGGTTGGCG+CGG | 0.493351 | contig217end:+16657 | MsG0080048135.01.T01:CDS |
| ATAATTATCAAGTAATTAGC+AGG | 0.499293 | contig217end:-16798 | MsG0080048135.01.T01:intergenic |
| TTGCTGGAATTGCTCAAGAA+TGG | 0.501210 | contig217end:+16384 | MsG0080048135.01.T01:CDS |
| AGGAAATGGTGGCAGAGGAA+GGG | 0.501251 | contig217end:+16635 | MsG0080048135.01.T01:CDS |
| AATTGCATCTCTTCTGGCAA+GGG | 0.502964 | contig217end:-16558 | MsG0080048135.01.T01:intergenic |
| AAATGTTCTGTACACTTGGC+TGG | 0.503926 | contig217end:+16761 | MsG0080048135.01.T01:three_prime_UTR |
| AGTGTTCGTGGCTTTGTTCG+TGG | 0.512561 | contig217end:-14827 | MsG0080048135.01.T01:intergenic |
| GTCTACGGTGGCGGCGACGG+TGG | 0.513209 | contig217end:-14935 | MsG0080048135.01.T01:intergenic |
| GAAGGGGTGGAAGAGGAGGT+TGG | 0.517256 | contig217end:+16652 | MsG0080048135.01.T01:CDS |
| AATGGTGGCAGAGGAAGGGG+TGG | 0.521908 | contig217end:+16639 | MsG0080048135.01.T01:CDS |
| AAATTGTAAAACCCTAGATT+GGG | 0.524328 | contig217end:-14859 | MsG0080048135.01.T01:intergenic |
| GAGATGCAATTGAAATCTGA+GGG | 0.531760 | contig217end:+16570 | MsG0080048135.01.T01:CDS |
| TGCTGGAATTGCTCAAGAAT+GGG | 0.536228 | contig217end:+16385 | MsG0080048135.01.T01:CDS |
| CGTCGCCGCCACCGTAGACA+TGG | 0.538541 | contig217end:+14939 | MsG0080048135.01.T01:CDS |
| TATGGAGGAAATGGTGGCAG+AGG | 0.549364 | contig217end:+16630 | MsG0080048135.01.T01:CDS |
| AGAGATGCAATTGAAATCTG+AGG | 0.552943 | contig217end:+16569 | MsG0080048135.01.T01:CDS |
| CTCCCAACTATCCCAATCTA+GGG | 0.553717 | contig217end:+14848 | MsG0080048135.01.T01:five_prime_UTR |
| CCTGTTAGAAAGATTGGCGT+AGG | 0.556604 | contig217end:+16417 | MsG0080048135.01.T01:CDS |
| TTGTTAACATTGAGATTCTG+AGG | 0.561661 | contig217end:-15228 | MsG0080048135.01.T01:intergenic |
| GAGGGGAACAAGAAGTTTGG+TGG | 0.580350 | contig217end:+16588 | MsG0080048135.01.T01:CDS |
| CGGTGTCATCTTCCCTGATG+AGG | 0.587311 | contig217end:-16494 | MsG0080048135.01.T01:intergenic |
| TGTTGGGATCGACGATTTCG+GGG | 0.595758 | contig217end:-14912 | MsG0080048135.01.T01:intergenic |
| TTTCAGCTTCCGAAAGTGTG+TGG | 0.599505 | contig217end:+16524 | MsG0080048135.01.T01:CDS |
| GGTGGAGGAAAGCATTATGG+AGG | 0.604832 | contig217end:+16615 | MsG0080048135.01.T01:CDS |
| CTGTTAGAAAGATTGGCGTA+GGG | 0.605723 | contig217end:+16418 | MsG0080048135.01.T01:CDS |
| GGGAACAAGAAGTTTGGTGG+TGG | 0.606840 | contig217end:+16591 | MsG0080048135.01.T01:CDS |
| AGCACCTACTGTTATAGCGA+GGG | 0.618289 | contig217end:-16467 | MsG0080048135.01.T01:intergenic |
| TTCAACTTCCATGTCTACGG+TGG | 0.626820 | contig217end:-14947 | MsG0080048135.01.T01:intergenic |
| TTAAATGATTCGGTTCATGA+CGG | 0.630848 | contig217end:+16945 | MsG0080048135.01.T01:three_prime_UTR |
| ACCTACTGTTATAGCGAGGG+TGG | 0.640894 | contig217end:-16464 | MsG0080048135.01.T01:intergenic |
| AAGCATTATGGAGGAAATGG+TGG | 0.643534 | contig217end:+16624 | MsG0080048135.01.T01:CDS |
| TCAGAATCTCAATGTTAACA+AGG | 0.654899 | contig217end:+15230 | MsG0080048135.01.T01:CDS |
| TAGCACCTACTGTTATAGCG+AGG | 0.657357 | contig217end:-16468 | MsG0080048135.01.T01:intergenic |
| TCGGAAGCTGAAATCATCAA+CGG | 0.662295 | contig217end:-16514 | MsG0080048135.01.T01:intergenic |
| TAGGTGCTATTTCCTCATCA+GGG | 0.664836 | contig217end:+16482 | MsG0080048135.01.T01:CDS |
| GTTGGGATCGACGATTTCGG+GGG | 0.669928 | contig217end:-14911 | MsG0080048135.01.T01:intergenic |
| GAAGAAGGCTAAAGTAGACG+AGG | 0.695132 | contig217end:+15047 | MsG0080048135.01.T01:CDS |
| ACCACCCTCGCTATAACAGT+AGG | 0.706414 | contig217end:+16463 | MsG0080048135.01.T01:CDS |
| AGATGCAATTGAAATCTGAG+GGG | 0.721407 | contig217end:+16571 | MsG0080048135.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTATGAAAGTTTT+GGG | + | contig217end:16841-16860 | MsG0080048135.01.T01:three_prime_UTR | 10.0% |
| !!! | TTTATAATTTATGAAAGTTT+TGG | + | contig217end:16840-16859 | MsG0080048135.01.T01:three_prime_UTR | 10.0% |
| !! | AAAAATTATTCAAACACAAT+CGG | - | contig217end:15463-15482 | MsG0080048135.01.T01:intergenic | 15.0% |
| !! | AGAGTTATTATTAAATGATT+CGG | + | contig217end:16935-16954 | MsG0080048135.01.T01:three_prime_UTR | 15.0% |
| !! | TATATCACTATCTTTAATAA+TGG | + | contig217end:16024-16043 | MsG0080048135.01.T01:intron | 15.0% |
| !!! | ATATGTATAGTCATTTTATT+TGG | + | contig217end:15693-15712 | MsG0080048135.01.T01:intron | 15.0% |
| !!! | GTCACATTTTTTTTTTAAAA+GGG | - | contig217end:16236-16255 | MsG0080048135.01.T01:intergenic | 15.0% |
| !!! | TGTCACATTTTTTTTTTAAA+AGG | - | contig217end:16237-16256 | MsG0080048135.01.T01:intergenic | 15.0% |
| !!! | TTACTTGATAATTATGATTT+TGG | + | contig217end:16806-16825 | MsG0080048135.01.T01:three_prime_UTR | 15.0% |
| !! | AAATTGATTACAATAGTTAC+TGG | + | contig217end:16713-16732 | MsG0080048135.01.T01:exon | 20.0% |
| !! | AATAAAACGAATGAAATCAT+AGG | - | contig217end:15261-15280 | MsG0080048135.01.T01:intergenic | 20.0% |
| !! | ATAATTATCAAGTAATTAGC+AGG | - | contig217end:16801-16820 | MsG0080048135.01.T01:intergenic | 20.0% |
| !! | ATCTGAAAATTACACATTTA+TGG | - | contig217end:15675-15694 | MsG0080048135.01.T01:intergenic | 20.0% |
| !! | GTCATTTACTTTATCTATAT+GGG | + | contig217end:15306-15325 | MsG0080048135.01.T01:intron | 20.0% |
| !!! | CATTTTTTTTTTAAAAGGGT+CGG | - | contig217end:16232-16251 | MsG0080048135.01.T01:intergenic | 20.0% |
| !!! | TGGTTTTTTAATCTCTTTTA+AGG | + | contig217end:16100-16119 | MsG0080048135.01.T01:intron | 20.0% |
| !!! | TGTCATTTACTTTATCTATA+TGG | + | contig217end:15305-15324 | MsG0080048135.01.T01:intron | 20.0% |
| !!! | TGTTTTTGTTAAAAGTATGT+TGG | + | contig217end:15782-15801 | MsG0080048135.01.T01:intron | 20.0% |
| !!! | TTTTTAATCTCTTTTAAGGT+CGG | + | contig217end:16104-16123 | MsG0080048135.01.T01:intron | 20.0% |
| ! | AAAACACACATAATTTCAGA+AGG | - | contig217end:15951-15970 | MsG0080048135.01.T01:intergenic | 25.0% |
| ! | AAATTGTAAAACCCTAGATT+GGG | - | contig217end:14862-14881 | MsG0080048135.01.T01:intergenic | 25.0% |
| ! | AATGAATAAACAAGTCAATG+TGG | - | contig217end:16345-16364 | MsG0080048135.01.T01:intergenic | 25.0% |
| ! | CATATAAATAGCACCAAATA+TGG | - | contig217end:16004-16023 | MsG0080048135.01.T01:intergenic | 25.0% |
| ! | GAAATATTGTGAGATTGATT+TGG | + | contig217end:15414-15433 | MsG0080048135.01.T01:intron | 25.0% |
| ! | TACTCTTCACTTATAAACTA+AGG | + | contig217end:15835-15854 | MsG0080048135.01.T01:intron | 25.0% |
| ! | TTTACTTTATCTATATGGGT+TGG | + | contig217end:15310-15329 | MsG0080048135.01.T01:intron | 25.0% |
| !! | AACTGATTCTATTGAACTTA+AGG | - | contig217end:16070-16089 | MsG0080048135.01.T01:intergenic | 25.0% |
| !! | ATAATTTTCGCGTTACTATA+TGG | + | contig217end:16193-16212 | MsG0080048135.01.T01:intron | 25.0% |
| !! | ATTGCTTGGATTTTCATTTA+GGG | + | contig217end:16871-16890 | MsG0080048135.01.T01:three_prime_UTR | 25.0% |
| !! | ATTTTCGATTAACAGAGTTT+TGG | + | contig217end:15361-15380 | MsG0080048135.01.T01:intron | 25.0% |
| !!! | TAATTATGATTTTGGCACTA+TGG | + | contig217end:16814-16833 | MsG0080048135.01.T01:three_prime_UTR | 25.0% |
| !!! | TACATCAAACGTAGTTTTAA+TGG | - | contig217end:15486-15505 | MsG0080048135.01.T01:intergenic | 25.0% |
| !!! | TTTGTGAAAACAGTTTTTTC+AGG | + | contig217end:15603-15622 | MsG0080048135.01.T01:intron | 25.0% |
| AAAAATCAGTGGAAGAAGAA+AGG | + | contig217end:15070-15089 | MsG0080048135.01.T01:CDS | 30.0% | |
| AATTACAGATACCCATTGTT+TGG | - | contig217end:15734-15753 | MsG0080048135.01.T01:intergenic | 30.0% | |
| AGGTGATGAAAAAGAAGAAA+AGG | + | contig217end:15116-15135 | MsG0080048135.01.T01:CDS | 30.0% | |
| CTAAAAATGTTCTGTACACT+TGG | + | contig217end:16757-16776 | MsG0080048135.01.T01:three_prime_UTR | 30.0% | |
| GAAATTGTAAAACCCTAGAT+TGG | - | contig217end:14863-14882 | MsG0080048135.01.T01:intergenic | 30.0% | |
| TCAATAGAATCAGTTGTCAT+TGG | + | contig217end:16075-16094 | MsG0080048135.01.T01:intron | 30.0% | |
| TCAGAATCTCAATGTTAACA+AGG | + | contig217end:15230-15249 | MsG0080048135.01.T01:CDS | 30.0% | |
| TTATATGATCCACACACTTT+CGG | - | contig217end:16536-16555 | MsG0080048135.01.T01:intergenic | 30.0% | |
| TTCACAAATTTCTTCATGCT+TGG | + | contig217end:15205-15224 | MsG0080048135.01.T01:CDS | 30.0% | |
| TTGTTAACATTGAGATTCTG+AGG | - | contig217end:15231-15250 | MsG0080048135.01.T01:intergenic | 30.0% | |
| ! | AAAGAAGAACCAAACGTTTT+GGG | - | contig217end:15168-15187 | MsG0080048135.01.T01:intergenic | 30.0% |
| ! | AAAGTACTTAGCCAAACAAT+GGG | + | contig217end:15720-15739 | MsG0080048135.01.T01:intron | 30.0% |
| ! | ATAAGTTGAATCTTCTGGTT+TGG | + | contig217end:15900-15919 | MsG0080048135.01.T01:intron | 30.0% |
| ! | CATTGCTTGGATTTTCATTT+AGG | + | contig217end:16870-16889 | MsG0080048135.01.T01:three_prime_UTR | 30.0% |
| ! | TTATGCCATACTCATCATTT+TGG | + | contig217end:16135-16154 | MsG0080048135.01.T01:intron | 30.0% |
| ! | TTGCTTGGATTTTCATTTAG+GGG | + | contig217end:16872-16891 | MsG0080048135.01.T01:three_prime_UTR | 30.0% |
| ! | TTGTTAAAAGTATGTTGGAG+AGG | + | contig217end:15787-15806 | MsG0080048135.01.T01:intron | 30.0% |
| !! | AAAAGTACTTAGCCAAACAA+TGG | + | contig217end:15719-15738 | MsG0080048135.01.T01:intron | 30.0% |
| !! | TTAAATGATTCGGTTCATGA+CGG | + | contig217end:16945-16964 | MsG0080048135.01.T01:three_prime_UTR | 30.0% |
| !!! | TTTTGGGTTATATCATTGCT+TGG | + | contig217end:16857-16876 | MsG0080048135.01.T01:three_prime_UTR | 30.0% |
| AAACGTACCACAAACTGAAA+TGG | + | contig217end:16899-16918 | MsG0080048135.01.T01:three_prime_UTR | 35.0% | |
| ACTCACCAAAATGATGAGTA+TGG | - | contig217end:16143-16162 | MsG0080048135.01.T01:intergenic | 35.0% | |
| AGAATCAGTTGTCATTGGAA+TGG | + | contig217end:16080-16099 | MsG0080048135.01.T01:intron | 35.0% | |
| AGAGATGCAATTGAAATCTG+AGG | + | contig217end:16569-16588 | MsG0080048135.01.T01:CDS | 35.0% | |
| AGATGCAATTGAAATCTGAG+GGG | + | contig217end:16571-16590 | MsG0080048135.01.T01:CDS | 35.0% | |
| AGCCTATCAAGACATATGAT+TGG | + | contig217end:16169-16188 | MsG0080048135.01.T01:intron | 35.0% | |
| ATCAAGCAAAACAGCTTATG+AGG | - | contig217end:15882-15901 | MsG0080048135.01.T01:intergenic | 35.0% | |
| CAATTTCTCCAAAACCCTAA+TGG | + | contig217end:14876-14895 | MsG0080048135.01.T01:exon | 35.0% | |
| CACATTTATGGAAGATATGC+AGG | - | contig217end:15663-15682 | MsG0080048135.01.T01:intergenic | 35.0% | |
| GAACATGTGCTAACCATATT+TGG | + | contig217end:15988-16007 | MsG0080048135.01.T01:intron | 35.0% | |
| GAGATGCAATTGAAATCTGA+GGG | + | contig217end:16570-16589 | MsG0080048135.01.T01:CDS | 35.0% | |
| GATTTCAATTGCATCTCTTC+TGG | - | contig217end:16567-16586 | MsG0080048135.01.T01:intergenic | 35.0% | |
| TGCCAATCATATGTCTTGAT+AGG | - | contig217end:16174-16193 | MsG0080048135.01.T01:intergenic | 35.0% | |
| ! | ACTAAGGACACTAAGTTGAA+AGG | + | contig217end:15851-15870 | MsG0080048135.01.T01:intron | 35.0% |
| ! | CAAAGAAGAACCAAACGTTT+TGG | - | contig217end:15169-15188 | MsG0080048135.01.T01:intergenic | 35.0% |
| ! | GCTTGATAAGTTGAATCTTC+TGG | + | contig217end:15895-15914 | MsG0080048135.01.T01:intron | 35.0% |
| ! | GTTTTCAACTTCCATGTCTA+CGG | - | contig217end:14953-14972 | MsG0080048135.01.T01:intergenic | 35.0% |
| ! | TTTTCGCGTTACTATATGGT+TGG | + | contig217end:16197-16216 | MsG0080048135.01.T01:intron | 35.0% |
| !! | AAAGAAGAAAAGGAAGCATC+TGG | + | contig217end:15126-15145 | MsG0080048135.01.T01:CDS | 35.0% |
| !! | CAAAACGTTTGGTTCTTCTT+TGG | + | contig217end:15167-15186 | MsG0080048135.01.T01:CDS | 35.0% |
| !!! | GCTACATCGCTAAGTTTTTT+AGG | - | contig217end:15634-15653 | MsG0080048135.01.T01:intergenic | 35.0% |
| !!! | TAATCTCTTTTAAGGTCGGT+TGG | + | contig217end:16108-16127 | MsG0080048135.01.T01:intron | 35.0% |
| AAACCCTAGATTGGGATAGT+TGG | - | contig217end:14854-14873 | MsG0080048135.01.T01:intergenic | 40.0% | |
| AAATGTTCTGTACACTTGGC+TGG | + | contig217end:16761-16780 | MsG0080048135.01.T01:three_prime_UTR | 40.0% | |
| AACCCTAGATTGGGATAGTT+GGG | - | contig217end:14853-14872 | MsG0080048135.01.T01:intergenic | 40.0% | |
| AAGCATTATGGAGGAAATGG+TGG | + | contig217end:16624-16643 | MsG0080048135.01.T01:CDS | 40.0% | |
| AATTGCATCTCTTCTGGCAA+GGG | - | contig217end:16561-16580 | MsG0080048135.01.T01:intergenic | 40.0% | |
| ACCCTAAACTTCTTTCACCT+CGG | - | contig217end:15575-15594 | MsG0080048135.01.T01:intergenic | 40.0% | |
| AGAAGAAAGGTTGGAGAAGT+TGG | + | contig217end:15083-15102 | MsG0080048135.01.T01:CDS | 40.0% | |
| AGTAGACGAGGAAAAATCAG+TGG | + | contig217end:15059-15078 | MsG0080048135.01.T01:CDS | 40.0% | |
| AGTCCAAAGAAAAACGAGCA+AGG | + | contig217end:14980-14999 | MsG0080048135.01.T01:CDS | 40.0% | |
| ATCAGTGGAAGAAGAAAGGT+TGG | + | contig217end:15074-15093 | MsG0080048135.01.T01:CDS | 40.0% | |
| CACACAACCATTTCAGTTTG+TGG | - | contig217end:16909-16928 | MsG0080048135.01.T01:intergenic | 40.0% | |
| CTGTTAGAAAGATTGGCGTA+GGG | + | contig217end:16418-16437 | MsG0080048135.01.T01:CDS | 40.0% | |
| GAGAAGTTGGAGAAAAACGA+AGG | + | contig217end:15096-15115 | MsG0080048135.01.T01:CDS | 40.0% | |
| GCAGAACCTGTTAGAAAGAT+TGG | + | contig217end:16411-16430 | MsG0080048135.01.T01:CDS | 40.0% | |
| GTCCAAAGAAAAACGAGCAA+GGG | + | contig217end:14981-15000 | MsG0080048135.01.T01:CDS | 40.0% | |
| TCGGAAGCTGAAATCATCAA+CGG | - | contig217end:16517-16536 | MsG0080048135.01.T01:intergenic | 40.0% | |
| TGCTGGAATTGCTCAAGAAT+GGG | + | contig217end:16385-16404 | MsG0080048135.01.T01:CDS | 40.0% | |
| TTGCTGGAATTGCTCAAGAA+TGG | + | contig217end:16384-16403 | MsG0080048135.01.T01:CDS | 40.0% | |
| ! | AAAAGTATGTTGGAGAGGAG+AGG | + | contig217end:15792-15811 | MsG0080048135.01.T01:intron | 40.0% |
| ! | AATTTGGGACCCAAAACGTT+TGG | + | contig217end:15156-15175 | MsG0080048135.01.T01:CDS | 40.0% |
| ! | AGCATCTGGTGATGTGAATT+TGG | + | contig217end:15140-15159 | MsG0080048135.01.T01:CDS | 40.0% |
| ! | GCATCTGGTGATGTGAATTT+GGG | + | contig217end:15141-15160 | MsG0080048135.01.T01:CDS | 40.0% |
| ! | TTCTTCTGCCATTAGGGTTT+TGG | - | contig217end:14887-14906 | MsG0080048135.01.T01:intergenic | 40.0% |
| !! | GGAAAGCATTATGGAGGAAA+TGG | + | contig217end:16621-16640 | MsG0080048135.01.T01:CDS | 40.0% |
| !! | TAGGTGCTATTTCCTCATCA+GGG | + | contig217end:16482-16501 | MsG0080048135.01.T01:CDS | 40.0% |
| !! | TTCCCTTGCTCGTTTTTCTT+TGG | - | contig217end:14986-15005 | MsG0080048135.01.T01:intergenic | 40.0% |
| ACCCGAGGTGAAAGAAGTTT+AGG | + | contig217end:15570-15589 | MsG0080048135.01.T01:intron | 45.0% | |
| ACTCCCAACTATCCCAATCT+AGG | + | contig217end:14847-14866 | MsG0080048135.01.T01:five_prime_UTR | 45.0% | |
| AGCACCTACTGTTATAGCGA+GGG | - | contig217end:16470-16489 | MsG0080048135.01.T01:intergenic | 45.0% | |
| CAATTGCATCTCTTCTGGCA+AGG | - | contig217end:16562-16581 | MsG0080048135.01.T01:intergenic | 45.0% | |
| CCCGAGGTGAAAGAAGTTTA+GGG | + | contig217end:15571-15590 | MsG0080048135.01.T01:intron | 45.0% | |
| CCCTAAACTTCTTTCACCTC+GGG | - | contig217end:15574-15593 | MsG0080048135.01.T01:intergenic | 45.0% | |
| CCTACGCCAATCTTTCTAAC+AGG | - | contig217end:16420-16439 | MsG0080048135.01.T01:intergenic | 45.0% | |
| CCTGTTAGAAAGATTGGCGT+AGG | + | contig217end:16417-16436 | MsG0080048135.01.T01:CDS | 45.0% | |
| CTCCCAACTATCCCAATCTA+GGG | + | contig217end:14848-14867 | MsG0080048135.01.T01:five_prime_UTR | 45.0% | |
| GAAGAAGGCTAAAGTAGACG+AGG | + | contig217end:15047-15066 | MsG0080048135.01.T01:CDS | 45.0% | |
| TAGCACCTACTGTTATAGCG+AGG | - | contig217end:16471-16490 | MsG0080048135.01.T01:intergenic | 45.0% | |
| TCTGAGGGGAACAAGAAGTT+TGG | + | contig217end:16585-16604 | MsG0080048135.01.T01:CDS | 45.0% | |
| TTCAACTTCCATGTCTACGG+TGG | - | contig217end:14950-14969 | MsG0080048135.01.T01:intergenic | 45.0% | |
| TTCACCTCGGGTTAAAAGTC+TGG | - | contig217end:15562-15581 | MsG0080048135.01.T01:intergenic | 45.0% | |
| ! | GATTCCAGACTTTTAACCCG+AGG | + | contig217end:15555-15574 | MsG0080048135.01.T01:intron | 45.0% |
| ! | TTTCAGCTTCCGAAAGTGTG+TGG | + | contig217end:16524-16543 | MsG0080048135.01.T01:CDS | 45.0% |
| !! | AACAAGAAGTTTGGTGGTGG+TGG | + | contig217end:16594-16613 | MsG0080048135.01.T01:CDS | 45.0% |
| !! | GTAGGTGCTATTTCCTCATC+AGG | + | contig217end:16481-16500 | MsG0080048135.01.T01:CDS | 45.0% |
| AACTTCCATGTCTACGGTGG+CGG | - | contig217end:14947-14966 | MsG0080048135.01.T01:intergenic | 50.0% | |
| ACCACCCTCGCTATAACAGT+AGG | + | contig217end:16463-16482 | MsG0080048135.01.T01:CDS | 50.0% | |
| ACCTACTGTTATAGCGAGGG+TGG | - | contig217end:16467-16486 | MsG0080048135.01.T01:intergenic | 50.0% | |
| AGGAAATGGTGGCAGAGGAA+GGG | + | contig217end:16635-16654 | MsG0080048135.01.T01:CDS | 50.0% | |
| GAAACGACGTCGTCGTCTTT+GGG | - | contig217end:15027-15046 | MsG0080048135.01.T01:intergenic | 50.0% | |
| GAGGGGAACAAGAAGTTTGG+TGG | + | contig217end:16588-16607 | MsG0080048135.01.T01:CDS | 50.0% | |
| GGCGGTTTCTTCTGCCATTA+GGG | - | contig217end:14893-14912 | MsG0080048135.01.T01:intergenic | 50.0% | |
| GTATGAGCACACGATGTTGC+TGG | + | contig217end:16295-16314 | MsG0080048135.01.T01:intron | 50.0% | |
| GTGTTGGGATCGACGATTTC+GGG | - | contig217end:14916-14935 | MsG0080048135.01.T01:intergenic | 50.0% | |
| TATGGAGGAAATGGTGGCAG+AGG | + | contig217end:16630-16649 | MsG0080048135.01.T01:CDS | 50.0% | |
| TGTTGGGATCGACGATTTCG+GGG | - | contig217end:14915-14934 | MsG0080048135.01.T01:intergenic | 50.0% | |
| ! | GGGAACAAGAAGTTTGGTGG+TGG | + | contig217end:16591-16610 | MsG0080048135.01.T01:CDS | 50.0% |
| ! | GGTGTTGGGATCGACGATTT+CGG | - | contig217end:14917-14936 | MsG0080048135.01.T01:intergenic | 50.0% |
| !! | AAGAAGTTTGGTGGTGGTGG+TGG | + | contig217end:16597-16616 | MsG0080048135.01.T01:CDS | 50.0% |
| !! | AGTGTTCGTGGCTTTGTTCG+TGG | - | contig217end:14830-14849 | MsG0080048135.01.T01:intergenic | 50.0% |
| !! | GGTGGAGGAAAGCATTATGG+AGG | + | contig217end:16615-16634 | MsG0080048135.01.T01:CDS | 50.0% |
| !! | GGTGGTGGAGGAAAGCATTA+TGG | + | contig217end:16612-16631 | MsG0080048135.01.T01:CDS | 50.0% |
| !! | GTGTTCGTGGCTTTGTTCGT+GGG | - | contig217end:14829-14848 | MsG0080048135.01.T01:intergenic | 50.0% |
| CGAAACGACGTCGTCGTCTT+TGG | - | contig217end:15028-15047 | MsG0080048135.01.T01:intergenic | 55.0% | |
| CGACGACGTCGTTTCGAAGA+AGG | + | contig217end:15032-15051 | MsG0080048135.01.T01:CDS | 55.0% | |
| GAGGAAATGGTGGCAGAGGA+AGG | + | contig217end:16634-16653 | MsG0080048135.01.T01:CDS | 55.0% | |
| GGAAATGGTGGCAGAGGAAG+GGG | + | contig217end:16636-16655 | MsG0080048135.01.T01:CDS | 55.0% | |
| GGGCGGTTTCTTCTGCCATT+AGG | - | contig217end:14894-14913 | MsG0080048135.01.T01:intergenic | 55.0% | |
| GTTGGGATCGACGATTTCGG+GGG | - | contig217end:14914-14933 | MsG0080048135.01.T01:intergenic | 55.0% | |
| !! | AAGTTTGGTGGTGGTGGTGG+AGG | + | contig217end:16600-16619 | MsG0080048135.01.T01:CDS | 55.0% |
| !! | CGGTGTCATCTTCCCTGATG+AGG | - | contig217end:16497-16516 | MsG0080048135.01.T01:intergenic | 55.0% |
| !! | GGGATAGTTGGGAGTGTTCG+TGG | - | contig217end:14842-14861 | MsG0080048135.01.T01:intergenic | 55.0% |
| AATGGTGGCAGAGGAAGGGG+TGG | + | contig217end:16639-16658 | MsG0080048135.01.T01:CDS | 60.0% | |
| AGAGGAAGGGGTGGAAGAGG+AGG | + | contig217end:16648-16667 | MsG0080048135.01.T01:CDS | 60.0% | |
| GAAGGGGTGGAAGAGGAGGT+TGG | + | contig217end:16652-16671 | MsG0080048135.01.T01:CDS | 60.0% | |
| TGGTCGTGGAAGAGGGGGAA+GGG | + | contig217end:16686-16705 | MsG0080048135.01.T01:CDS | 60.0% | |
| !! | GTGGTGGTGGTCGTGGAAGA+GGG | + | contig217end:16679-16698 | MsG0080048135.01.T01:CDS | 60.0% |
| !! | TGGTGGTGGTCGTGGAAGAG+GGG | + | contig217end:16680-16699 | MsG0080048135.01.T01:CDS | 60.0% |
| AGCGAGGGTGGTCGCGAACT+TGG | - | contig217end:16455-16474 | MsG0080048135.01.T01:intergenic | 65.0% | |
| GGCAGAGGAAGGGGTGGAAG+AGG | + | contig217end:16645-16664 | MsG0080048135.01.T01:CDS | 65.0% | |
| GGGATCGACGATTTCGGGGG+CGG | - | contig217end:14911-14930 | MsG0080048135.01.T01:intergenic | 65.0% | |
| GGTCGTGGAAGAGGGGGAAG+GGG | + | contig217end:16687-16706 | MsG0080048135.01.T01:CDS | 65.0% | |
| GGTGGAAGAGGAGGTTGGCG+CGG | + | contig217end:16657-16676 | MsG0080048135.01.T01:CDS | 65.0% | |
| GTCGTGGAAGAGGGGGAAGG+GGG | + | contig217end:16688-16707 | MsG0080048135.01.T01:CDS | 65.0% | |
| GTGGTCGTGGAAGAGGGGGA+AGG | + | contig217end:16685-16704 | MsG0080048135.01.T01:CDS | 65.0% | |
| ! | CATGTCTACGGTGGCGGCGA+CGG | - | contig217end:14941-14960 | MsG0080048135.01.T01:intergenic | 65.0% |
| ! | GGTGGTGGTCGTGGAAGAGG+GGG | + | contig217end:16681-16700 | MsG0080048135.01.T01:CDS | 65.0% |
| !! | GGTGGTGGTGGTCGTGGAAG+AGG | + | contig217end:16678-16697 | MsG0080048135.01.T01:CDS | 65.0% |
| AGAGGAGGTTGGCGCGGTGG+TGG | + | contig217end:16663-16682 | MsG0080048135.01.T01:CDS | 70.0% | |
| CGTCGCCGCCACCGTAGACA+TGG | + | contig217end:14939-14958 | MsG0080048135.01.T01:CDS | 70.0% | |
| GGAAGAGGAGGTTGGCGCGG+TGG | + | contig217end:16660-16679 | MsG0080048135.01.T01:CDS | 70.0% | |
| GTGGCGGCGACGGTGGTGTT+GGG | - | contig217end:14931-14950 | MsG0080048135.01.T01:intergenic | 70.0% | |
| ! | GGAGGTTGGCGCGGTGGTGG+TGG | + | contig217end:16666-16685 | MsG0080048135.01.T01:CDS | 75.0% |
| ! | GGTGGCGGCGACGGTGGTGT+TGG | - | contig217end:14932-14951 | MsG0080048135.01.T01:intergenic | 75.0% |
| ! | GTCTACGGTGGCGGCGACGG+TGG | - | contig217end:14938-14957 | MsG0080048135.01.T01:intergenic | 75.0% |
| !! | TGGCGCGGTGGTGGTGGTCG+TGG | + | contig217end:16672-16691 | MsG0080048135.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig217end | gene | 14818 | 16972 | 14818 | ID=MsG0080048135.01;Name=MsG0080048135.01 |
| contig217end | mRNA | 14818 | 16972 | 14818 | ID=MsG0080048135.01.T01;Parent=MsG0080048135.01;Name=MsG0080048135.01.T01;_AED=0.27;_eAED=0.27;_QI=77|1|1|1|1|1|2|253|235 |
| contig217end | exon | 16369 | 16972 | 16369 | ID=MsG0080048135.01.T01:exon:11708;Parent=MsG0080048135.01.T01 |
| contig217end | exon | 14818 | 15251 | 14818 | ID=MsG0080048135.01.T01:exon:11707;Parent=MsG0080048135.01.T01 |
| contig217end | five_prime_UTR | 14818 | 14894 | 14818 | ID=MsG0080048135.01.T01:five_prime_utr;Parent=MsG0080048135.01.T01 |
| contig217end | CDS | 14895 | 15251 | 14895 | ID=MsG0080048135.01.T01:cds;Parent=MsG0080048135.01.T01 |
| contig217end | CDS | 16369 | 16719 | 16369 | ID=MsG0080048135.01.T01:cds;Parent=MsG0080048135.01.T01 |
| contig217end | three_prime_UTR | 16720 | 16972 | 16720 | ID=MsG0080048135.01.T01:three_prime_utr;Parent=MsG0080048135.01.T01 |
| Gene Sequence |
| Protein sequence |
