Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040586.01.T01 | XP_003625265.1 | 88.706 | 425 | 0 | 1 | 1 | 425 | 1 | 377 | 0 | 762 |
| MsG0780040586.01.T02 | XP_003625265.1 | 88.706 | 425 | 0 | 1 | 1 | 425 | 1 | 377 | 0 | 762 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040586.01.T01 | P46258 | 87.765 | 425 | 4 | 1 | 1 | 425 | 1 | 377 | 0 | 754 |
| MsG0780040586.01.T02 | P46258 | 87.765 | 425 | 4 | 1 | 1 | 425 | 1 | 377 | 0 | 754 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040586.01.T01 | G7KVE1 | 88.706 | 425 | 0 | 1 | 1 | 425 | 1 | 377 | 0.0 | 762 |
| MsG0780040586.01.T02 | G7KVE1 | 88.706 | 425 | 0 | 1 | 1 | 425 | 1 | 377 | 0.0 | 762 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000360.01 | MsG0780040586.01 | 0.809161 | 2.169738e-50 | 1.264553e-47 |
| MsG0180000364.01 | MsG0780040586.01 | 0.834868 | 2.337260e-56 | 2.809502e-53 |
| MsG0180001198.01 | MsG0780040586.01 | 0.805050 | 1.609870e-49 | 8.432502e-47 |
| MsG0180004142.01 | MsG0780040586.01 | 0.869331 | 3.353737e-66 | 1.253767e-62 |
| MsG0180004989.01 | MsG0780040586.01 | 0.819221 | 1.301220e-52 | 9.952767e-50 |
| MsG0180005188.01 | MsG0780040586.01 | 0.824895 | 6.300429e-54 | 5.655001e-51 |
| MsG0180006260.01 | MsG0780040586.01 | 0.831605 | 1.518254e-55 | 1.655865e-52 |
| MsG0780040564.01 | MsG0780040586.01 | 0.849212 | 3.739030e-60 | 7.037908e-57 |
| MsG0780040586.01 | MsG0780040854.01 | 0.826888 | 2.118921e-54 | 2.012964e-51 |
| MsG0780040586.01 | MsG0780040879.01 | 0.801259 | 9.797082e-49 | 4.657649e-46 |
| MsG0780040586.01 | MsG0880042845.01 | 0.823187 | 1.585003e-53 | 1.355111e-50 |
| MsG0780040586.01 | MsG0880044803.01 | 0.800885 | 1.168349e-48 | 5.502442e-46 |
| MsG0780040586.01 | MsG0880045022.01 | 0.829293 | 5.581662e-55 | 5.689655e-52 |
| MsG0780040586.01 | MsG0880046070.01 | 0.808307 | 3.303068e-50 | 1.882139e-47 |
| MsG0780040586.01 | MsG0880047293.01 | 0.824242 | 8.977431e-54 | 7.906979e-51 |
| MsG0280010857.01 | MsG0780040586.01 | 0.829971 | 3.818891e-55 | 3.969582e-52 |
| MsG0480018845.01 | MsG0780040586.01 | 0.831521 | 1.592361e-55 | 1.732304e-52 |
| MsG0480018846.01 | MsG0780040586.01 | 0.845895 | 3.051951e-59 | 5.162273e-56 |
| MsG0480021156.01 | MsG0780040586.01 | 0.845428 | 4.086265e-59 | 6.807312e-56 |
| MsG0480021158.01 | MsG0780040586.01 | 0.803871 | 2.834362e-49 | 1.440349e-46 |
| MsG0480022228.01 | MsG0780040586.01 | 0.835534 | 1.586952e-56 | 1.946108e-53 |
| MsG0480023053.01 | MsG0780040586.01 | 0.862872 | 3.726112e-64 | 1.107953e-60 |
| MsG0480023064.01 | MsG0780040586.01 | 0.808221 | 3.444861e-50 | 1.958538e-47 |
| MsG0480023620.01 | MsG0780040586.01 | 0.860657 | 1.772288e-63 | 4.881434e-60 |
| MsG0380017240.01 | MsG0780040586.01 | 0.844805 | 6.022630e-59 | 9.836511e-56 |
| MsG0380017643.01 | MsG0780040586.01 | 0.826820 | 2.199703e-54 | 2.085556e-51 |
| MsG0480018256.01 | MsG0780040586.01 | 0.829967 | 3.826999e-55 | 3.977519e-52 |
| MsG0580026328.01 | MsG0780040586.01 | 0.808230 | 3.429992e-50 | 1.950527e-47 |
| MsG0280007790.01 | MsG0780040586.01 | 0.802205 | 6.265966e-49 | 3.051066e-46 |
| MsG0280008235.01 | MsG0780040586.01 | 0.830058 | 3.637015e-55 | 3.789779e-52 |
| MsG0280009509.01 | MsG0780040586.01 | 0.846506 | 2.081500e-59 | 3.590879e-56 |
| MsG0280010001.01 | MsG0780040586.01 | 0.861692 | 8.583961e-64 | 2.449098e-60 |
| MsG0780039654.01 | MsG0780040586.01 | 0.814687 | 1.357353e-51 | 9.168943e-49 |
| MsG0780039817.01 | MsG0780040586.01 | 0.841764 | 3.897773e-58 | 5.785720e-55 |
| MsG0780040079.01 | MsG0780040586.01 | 0.806681 | 7.310020e-50 | 3.992211e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040586.01.T01 | MTR_7g093260 | 88.706 | 425 | 0 | 1 | 1 | 425 | 1 | 377 | 0.0 | 762 |
| MsG0780040586.01.T01 | MTR_0015s0130 | 85.882 | 425 | 12 | 1 | 1 | 425 | 1 | 377 | 0.0 | 745 |
| MsG0780040586.01.T01 | MTR_2g096840 | 85.176 | 425 | 15 | 1 | 1 | 425 | 1 | 377 | 0.0 | 742 |
| MsG0780040586.01.T01 | MTR_6g004000 | 85.176 | 425 | 15 | 1 | 1 | 425 | 1 | 377 | 0.0 | 740 |
| MsG0780040586.01.T01 | MTR_3g095530 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 738 |
| MsG0780040586.01.T01 | MTR_7g026230 | 85.176 | 425 | 15 | 1 | 1 | 425 | 1 | 377 | 0.0 | 738 |
| MsG0780040586.01.T01 | MTR_2g008050 | 82.353 | 425 | 27 | 1 | 1 | 425 | 1 | 377 | 0.0 | 721 |
| MsG0780040586.01.T01 | MTR_7g027185 | 42.432 | 370 | 199 | 3 | 67 | 422 | 16 | 385 | 5.16e-112 | 334 |
| MsG0780040586.01.T01 | MTR_7g027185 | 43.642 | 346 | 182 | 2 | 67 | 399 | 16 | 361 | 2.83e-109 | 326 |
| MsG0780040586.01.T01 | MTR_7g027185 | 46.644 | 298 | 157 | 1 | 67 | 362 | 16 | 313 | 1.17e-101 | 305 |
| MsG0780040586.01.T01 | MTR_5g066400 | 37.705 | 427 | 192 | 12 | 69 | 424 | 21 | 444 | 1.11e-87 | 274 |
| MsG0780040586.01.T01 | MTR_8g464900 | 36.893 | 412 | 187 | 11 | 69 | 410 | 21 | 429 | 4.48e-81 | 256 |
| MsG0780040586.01.T01 | MTR_5g066400 | 34.977 | 426 | 177 | 12 | 69 | 424 | 21 | 416 | 6.88e-75 | 240 |
| MsG0780040586.01.T01 | MTR_8g089630 | 34.398 | 407 | 201 | 10 | 70 | 420 | 22 | 418 | 3.09e-66 | 218 |
| MsG0780040586.01.T01 | MTR_3g030550 | 37.940 | 369 | 203 | 9 | 66 | 425 | 12 | 363 | 8.61e-66 | 214 |
| MsG0780040586.01.T01 | MTR_5g066400 | 34.474 | 380 | 178 | 11 | 69 | 380 | 21 | 397 | 6.60e-64 | 211 |
| MsG0780040586.01.T01 | MTR_2g445210 | 27.119 | 413 | 235 | 7 | 66 | 414 | 16 | 426 | 3.64e-49 | 173 |
| MsG0780040586.01.T01 | MTR_8g007440 | 33.588 | 262 | 151 | 6 | 125 | 367 | 9 | 266 | 2.59e-44 | 155 |
| MsG0780040586.01.T01 | MTR_3g010170 | 30.303 | 297 | 183 | 9 | 139 | 419 | 179 | 467 | 2.75e-39 | 147 |
| MsG0780040586.01.T01 | MTR_2g445210 | 25.414 | 362 | 204 | 7 | 66 | 363 | 16 | 375 | 1.81e-35 | 135 |
| MsG0780040586.01.T01 | MTR_8g070520 | 31.058 | 293 | 175 | 10 | 139 | 414 | 187 | 469 | 3.32e-35 | 136 |
| MsG0780040586.01.T01 | MTR_8g070520 | 30.576 | 278 | 167 | 9 | 139 | 400 | 187 | 454 | 5.68e-32 | 127 |
| MsG0780040586.01.T01 | MTR_3g067945 | 29.289 | 239 | 150 | 7 | 70 | 293 | 34 | 268 | 6.05e-19 | 89.7 |
| MsG0780040586.01.T01 | MTR_3g067945 | 34.426 | 122 | 77 | 2 | 298 | 416 | 586 | 707 | 1.25e-15 | 79.7 |
| MsG0780040586.01.T01 | MTR_8g008540 | 70.270 | 37 | 11 | 0 | 388 | 424 | 41 | 77 | 4.91e-13 | 64.7 |
| MsG0780040586.01.T02 | MTR_7g093260 | 88.706 | 425 | 0 | 1 | 1 | 425 | 1 | 377 | 0.0 | 762 |
| MsG0780040586.01.T02 | MTR_0015s0130 | 85.882 | 425 | 12 | 1 | 1 | 425 | 1 | 377 | 0.0 | 745 |
| MsG0780040586.01.T02 | MTR_2g096840 | 85.176 | 425 | 15 | 1 | 1 | 425 | 1 | 377 | 0.0 | 742 |
| MsG0780040586.01.T02 | MTR_6g004000 | 85.176 | 425 | 15 | 1 | 1 | 425 | 1 | 377 | 0.0 | 740 |
| MsG0780040586.01.T02 | MTR_3g095530 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 738 |
| MsG0780040586.01.T02 | MTR_7g026230 | 85.176 | 425 | 15 | 1 | 1 | 425 | 1 | 377 | 0.0 | 738 |
| MsG0780040586.01.T02 | MTR_2g008050 | 82.353 | 425 | 27 | 1 | 1 | 425 | 1 | 377 | 0.0 | 721 |
| MsG0780040586.01.T02 | MTR_7g027185 | 42.432 | 370 | 199 | 3 | 67 | 422 | 16 | 385 | 5.16e-112 | 334 |
| MsG0780040586.01.T02 | MTR_7g027185 | 43.642 | 346 | 182 | 2 | 67 | 399 | 16 | 361 | 2.83e-109 | 326 |
| MsG0780040586.01.T02 | MTR_7g027185 | 46.644 | 298 | 157 | 1 | 67 | 362 | 16 | 313 | 1.17e-101 | 305 |
| MsG0780040586.01.T02 | MTR_5g066400 | 37.705 | 427 | 192 | 12 | 69 | 424 | 21 | 444 | 1.11e-87 | 274 |
| MsG0780040586.01.T02 | MTR_8g464900 | 36.893 | 412 | 187 | 11 | 69 | 410 | 21 | 429 | 4.48e-81 | 256 |
| MsG0780040586.01.T02 | MTR_5g066400 | 34.977 | 426 | 177 | 12 | 69 | 424 | 21 | 416 | 6.88e-75 | 240 |
| MsG0780040586.01.T02 | MTR_8g089630 | 34.398 | 407 | 201 | 10 | 70 | 420 | 22 | 418 | 3.09e-66 | 218 |
| MsG0780040586.01.T02 | MTR_3g030550 | 37.940 | 369 | 203 | 9 | 66 | 425 | 12 | 363 | 8.61e-66 | 214 |
| MsG0780040586.01.T02 | MTR_5g066400 | 34.474 | 380 | 178 | 11 | 69 | 380 | 21 | 397 | 6.60e-64 | 211 |
| MsG0780040586.01.T02 | MTR_2g445210 | 27.119 | 413 | 235 | 7 | 66 | 414 | 16 | 426 | 3.64e-49 | 173 |
| MsG0780040586.01.T02 | MTR_8g007440 | 33.588 | 262 | 151 | 6 | 125 | 367 | 9 | 266 | 2.59e-44 | 155 |
| MsG0780040586.01.T02 | MTR_3g010170 | 30.303 | 297 | 183 | 9 | 139 | 419 | 179 | 467 | 2.75e-39 | 147 |
| MsG0780040586.01.T02 | MTR_2g445210 | 25.414 | 362 | 204 | 7 | 66 | 363 | 16 | 375 | 1.81e-35 | 135 |
| MsG0780040586.01.T02 | MTR_8g070520 | 31.058 | 293 | 175 | 10 | 139 | 414 | 187 | 469 | 3.32e-35 | 136 |
| MsG0780040586.01.T02 | MTR_8g070520 | 30.576 | 278 | 167 | 9 | 139 | 400 | 187 | 454 | 5.68e-32 | 127 |
| MsG0780040586.01.T02 | MTR_3g067945 | 29.289 | 239 | 150 | 7 | 70 | 293 | 34 | 268 | 6.05e-19 | 89.7 |
| MsG0780040586.01.T02 | MTR_3g067945 | 34.426 | 122 | 77 | 2 | 298 | 416 | 586 | 707 | 1.25e-15 | 79.7 |
| MsG0780040586.01.T02 | MTR_8g008540 | 70.270 | 37 | 11 | 0 | 388 | 424 | 41 | 77 | 4.91e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040586.01.T01 | AT5G09810 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 739 |
| MsG0780040586.01.T01 | AT3G12110 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 737 |
| MsG0780040586.01.T01 | AT3G46520 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T01 | AT3G46520 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T01 | AT3G53750 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T01 | AT3G53750 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T01 | AT2G37620 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T01 | AT2G37620 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T01 | AT2G37620 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T01 | AT2G37620 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T01 | AT5G59370 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 735 |
| MsG0780040586.01.T01 | AT5G59370 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 735 |
| MsG0780040586.01.T01 | AT3G18780 | 80.706 | 425 | 34 | 1 | 1 | 425 | 1 | 377 | 0.0 | 714 |
| MsG0780040586.01.T01 | AT3G18780 | 80.706 | 425 | 34 | 1 | 1 | 425 | 1 | 377 | 0.0 | 714 |
| MsG0780040586.01.T01 | AT1G49240 | 80.471 | 425 | 35 | 1 | 1 | 425 | 1 | 377 | 0.0 | 713 |
| MsG0780040586.01.T01 | AT3G18780 | 80.098 | 407 | 33 | 1 | 1 | 407 | 1 | 359 | 0.0 | 674 |
| MsG0780040586.01.T01 | AT2G42100 | 84.444 | 360 | 56 | 0 | 66 | 425 | 19 | 378 | 0.0 | 655 |
| MsG0780040586.01.T01 | AT2G42170 | 78.313 | 332 | 69 | 1 | 94 | 425 | 1 | 329 | 0.0 | 560 |
| MsG0780040586.01.T01 | AT2G42170 | 78.313 | 332 | 69 | 1 | 94 | 425 | 1 | 329 | 0.0 | 560 |
| MsG0780040586.01.T01 | AT2G42090 | 71.309 | 359 | 98 | 1 | 66 | 424 | 12 | 365 | 0.0 | 549 |
| MsG0780040586.01.T01 | AT2G42170 | 78.205 | 312 | 65 | 1 | 94 | 405 | 1 | 309 | 0.0 | 522 |
| MsG0780040586.01.T01 | AT2G42170 | 78.205 | 312 | 65 | 1 | 94 | 405 | 1 | 309 | 0.0 | 522 |
| MsG0780040586.01.T01 | AT2G42170 | 78.761 | 226 | 45 | 1 | 200 | 425 | 9 | 231 | 2.27e-131 | 377 |
| MsG0780040586.01.T01 | AT3G27000 | 43.243 | 370 | 196 | 4 | 67 | 422 | 16 | 385 | 1.55e-113 | 338 |
| MsG0780040586.01.T01 | AT1G18450 | 37.116 | 423 | 196 | 9 | 69 | 424 | 21 | 440 | 4.93e-90 | 280 |
| MsG0780040586.01.T01 | AT1G13180 | 33.415 | 407 | 207 | 11 | 70 | 421 | 21 | 418 | 5.25e-66 | 217 |
| MsG0780040586.01.T01 | AT3G60830 | 37.940 | 369 | 205 | 9 | 65 | 425 | 11 | 363 | 1.33e-64 | 211 |
| MsG0780040586.01.T01 | AT3G33520 | 29.540 | 413 | 233 | 7 | 66 | 425 | 13 | 420 | 1.63e-53 | 184 |
| MsG0780040586.01.T01 | AT5G56180 | 30.986 | 284 | 171 | 9 | 139 | 406 | 50 | 324 | 4.38e-34 | 130 |
| MsG0780040586.01.T01 | AT5G56180 | 30.986 | 284 | 171 | 9 | 139 | 406 | 182 | 456 | 2.47e-33 | 130 |
| MsG0780040586.01.T01 | AT3G12380 | 30.556 | 252 | 147 | 10 | 63 | 293 | 30 | 274 | 1.55e-21 | 97.8 |
| MsG0780040586.01.T01 | AT3G12380 | 32.414 | 145 | 94 | 2 | 276 | 416 | 572 | 716 | 3.84e-16 | 81.3 |
| MsG0780040586.01.T01 | AT3G12380 | 30.400 | 250 | 144 | 10 | 63 | 293 | 30 | 268 | 7.02e-21 | 95.9 |
| MsG0780040586.01.T01 | AT3G12380 | 32.414 | 145 | 94 | 2 | 276 | 416 | 566 | 710 | 4.37e-16 | 80.9 |
| MsG0780040586.01.T01 | AT1G73910 | 37.008 | 127 | 61 | 3 | 67 | 177 | 19 | 142 | 2.80e-20 | 87.4 |
| MsG0780040586.01.T01 | AT1G73910 | 37.008 | 127 | 61 | 3 | 67 | 177 | 19 | 142 | 2.80e-20 | 87.4 |
| MsG0780040586.01.T01 | AT5G56180 | 32.292 | 192 | 110 | 7 | 139 | 319 | 182 | 364 | 9.46e-19 | 87.8 |
| MsG0780040586.01.T02 | AT5G09810 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 739 |
| MsG0780040586.01.T02 | AT3G12110 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 737 |
| MsG0780040586.01.T02 | AT3G46520 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T02 | AT3G46520 | 84.941 | 425 | 16 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T02 | AT3G53750 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T02 | AT3G53750 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T02 | AT2G37620 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T02 | AT2G37620 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T02 | AT2G37620 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T02 | AT2G37620 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 736 |
| MsG0780040586.01.T02 | AT5G59370 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 735 |
| MsG0780040586.01.T02 | AT5G59370 | 84.706 | 425 | 17 | 1 | 1 | 425 | 1 | 377 | 0.0 | 735 |
| MsG0780040586.01.T02 | AT3G18780 | 80.706 | 425 | 34 | 1 | 1 | 425 | 1 | 377 | 0.0 | 714 |
| MsG0780040586.01.T02 | AT3G18780 | 80.706 | 425 | 34 | 1 | 1 | 425 | 1 | 377 | 0.0 | 714 |
| MsG0780040586.01.T02 | AT1G49240 | 80.471 | 425 | 35 | 1 | 1 | 425 | 1 | 377 | 0.0 | 713 |
| MsG0780040586.01.T02 | AT3G18780 | 80.098 | 407 | 33 | 1 | 1 | 407 | 1 | 359 | 0.0 | 674 |
| MsG0780040586.01.T02 | AT2G42100 | 84.444 | 360 | 56 | 0 | 66 | 425 | 19 | 378 | 0.0 | 655 |
| MsG0780040586.01.T02 | AT2G42170 | 78.313 | 332 | 69 | 1 | 94 | 425 | 1 | 329 | 0.0 | 560 |
| MsG0780040586.01.T02 | AT2G42170 | 78.313 | 332 | 69 | 1 | 94 | 425 | 1 | 329 | 0.0 | 560 |
| MsG0780040586.01.T02 | AT2G42090 | 71.309 | 359 | 98 | 1 | 66 | 424 | 12 | 365 | 0.0 | 549 |
| MsG0780040586.01.T02 | AT2G42170 | 78.205 | 312 | 65 | 1 | 94 | 405 | 1 | 309 | 0.0 | 522 |
| MsG0780040586.01.T02 | AT2G42170 | 78.205 | 312 | 65 | 1 | 94 | 405 | 1 | 309 | 0.0 | 522 |
| MsG0780040586.01.T02 | AT2G42170 | 78.761 | 226 | 45 | 1 | 200 | 425 | 9 | 231 | 2.27e-131 | 377 |
| MsG0780040586.01.T02 | AT3G27000 | 43.243 | 370 | 196 | 4 | 67 | 422 | 16 | 385 | 1.55e-113 | 338 |
| MsG0780040586.01.T02 | AT1G18450 | 37.116 | 423 | 196 | 9 | 69 | 424 | 21 | 440 | 4.93e-90 | 280 |
| MsG0780040586.01.T02 | AT1G13180 | 33.415 | 407 | 207 | 11 | 70 | 421 | 21 | 418 | 5.25e-66 | 217 |
| MsG0780040586.01.T02 | AT3G60830 | 37.940 | 369 | 205 | 9 | 65 | 425 | 11 | 363 | 1.33e-64 | 211 |
| MsG0780040586.01.T02 | AT3G33520 | 29.540 | 413 | 233 | 7 | 66 | 425 | 13 | 420 | 1.63e-53 | 184 |
| MsG0780040586.01.T02 | AT5G56180 | 30.986 | 284 | 171 | 9 | 139 | 406 | 50 | 324 | 4.38e-34 | 130 |
| MsG0780040586.01.T02 | AT5G56180 | 30.986 | 284 | 171 | 9 | 139 | 406 | 182 | 456 | 2.47e-33 | 130 |
| MsG0780040586.01.T02 | AT3G12380 | 30.556 | 252 | 147 | 10 | 63 | 293 | 30 | 274 | 1.55e-21 | 97.8 |
| MsG0780040586.01.T02 | AT3G12380 | 32.414 | 145 | 94 | 2 | 276 | 416 | 572 | 716 | 3.84e-16 | 81.3 |
| MsG0780040586.01.T02 | AT3G12380 | 30.400 | 250 | 144 | 10 | 63 | 293 | 30 | 268 | 7.02e-21 | 95.9 |
| MsG0780040586.01.T02 | AT3G12380 | 32.414 | 145 | 94 | 2 | 276 | 416 | 566 | 710 | 4.37e-16 | 80.9 |
| MsG0780040586.01.T02 | AT1G73910 | 37.008 | 127 | 61 | 3 | 67 | 177 | 19 | 142 | 2.80e-20 | 87.4 |
| MsG0780040586.01.T02 | AT1G73910 | 37.008 | 127 | 61 | 3 | 67 | 177 | 19 | 142 | 2.80e-20 | 87.4 |
| MsG0780040586.01.T02 | AT5G56180 | 32.292 | 192 | 110 | 7 | 139 | 319 | 182 | 364 | 9.46e-19 | 87.8 |
Find 22 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATAAATTATAATTTCTT+AGG | 0.240280 | 7:-79548320 | MsG0780040586.01.T02:three_prime_UTR |
| CATTTCCTGTGTACTATTGA+TGG | 0.320989 | 7:+79548753 | None:intergenic |
| GGTGCATGAGAGCTGGATTA+AGG | 0.354953 | 7:-79548712 | MsG0780040586.01.T01:intron |
| AAGGCAGAATATGATGAATC+TGG | 0.369605 | 7:-79548777 | MsG0780040586.01.T01:CDS |
| CAAAGAAATGGTAAAAGAAT+AGG | 0.395590 | 7:+79548627 | None:intergenic |
| GATGTGTATTGTTACTGATT+TGG | 0.407826 | 7:-79548502 | MsG0780040586.01.T01:three_prime_UTR |
| ATAATTTATGTTTATCAAGT+TGG | 0.424435 | 7:+79548331 | None:intergenic |
| AATGGTAAAAGAATAGGAAA+TGG | 0.440968 | 7:+79548633 | None:intergenic |
| GAGAAACGTAATCAAAGAAA+TGG | 0.444571 | 7:+79548615 | None:intergenic |
| AAGTGTTCTGGTTGTCATAG+TGG | 0.453137 | 7:-79548451 | MsG0780040586.01.T01:three_prime_UTR |
| AAGTTCCTCAACCAACTAGA+TGG | 0.474313 | 7:+79548656 | None:intergenic |
| CACATCTCTACAACAAAATG+AGG | 0.474871 | 7:+79548519 | None:intergenic |
| AAATCACGGTGCATGAGAGC+TGG | 0.493439 | 7:-79548719 | MsG0780040586.01.T01:intron |
| ATATCCCAACATATCAAGAA+AGG | 0.530216 | 7:+79548584 | None:intergenic |
| AGGCAGAATATGATGAATCT+GGG | 0.564408 | 7:-79548776 | MsG0780040586.01.T01:CDS |
| AAATACCATCTAGTTGGTTG+AGG | 0.571614 | 7:-79548661 | MsG0780040586.01.T01:three_prime_UTR |
| ACATCTCTACAACAAAATGA+GGG | 0.581981 | 7:+79548520 | None:intergenic |
| CAAGTTGGCTTATGAAACGT+AGG | 0.624365 | 7:+79548346 | None:intergenic |
| ATGCTTCTAAGTTCAAATCA+CGG | 0.637328 | 7:-79548733 | MsG0780040586.01.T01:intron |
| CTGGGCCATCAATAGTACAC+AGG | 0.648814 | 7:-79548758 | MsG0780040586.01.T01:CDS |
| TGTGCAGATGTGGATTGCAA+AGG | 0.658163 | 7:-79548796 | MsG0780040586.01.T01:intron |
| CATCTCTACAACAAAATGAG+GGG | 0.666777 | 7:+79548521 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATAAATTATAATTTCTT+AGG | - | Chr7:79550911-79550930 | MsG0780040586.01.T01:CDS | 10.0% |
| !!! | AAATCTAATTTTTTTTTTAC+AGG | + | Chr7:79549187-79549206 | None:intergenic | 10.0% |
| !!! | AATCTAATTTTTTTTTTACA+GGG | + | Chr7:79549186-79549205 | None:intergenic | 10.0% |
| !!! | GTAAAAAAAAAATTAGATTT+TGG | - | Chr7:79549187-79549206 | MsG0780040586.01.T01:CDS | 10.0% |
| !!! | TGTAAAAAAAAAATAGTTTT+TGG | + | Chr7:79549377-79549396 | None:intergenic | 10.0% |
| !!! | TTATTTTTTCAAGTTATTAT+CGG | - | Chr7:79548478-79548497 | MsG0780040586.01.T01:intron | 10.0% |
| !! | AAAAAACAAAAAAAATTTGC+AGG | + | Chr7:79549215-79549234 | None:intergenic | 15.0% |
| !! | AAAAACAAAAAAAATTTGCA+GGG | + | Chr7:79549214-79549233 | None:intergenic | 15.0% |
| !! | ATAATTTAAAGGCTAAAATA+TGG | - | Chr7:79549123-79549142 | MsG0780040586.01.T01:CDS | 15.0% |
| !! | ATAATTTATGTTTATCAAGT+TGG | + | Chr7:79550903-79550922 | None:intergenic | 15.0% |
| !!! | TTTTAAATTAGGCTAAAATA+TGG | + | Chr7:79549441-79549460 | None:intergenic | 15.0% |
| !!! | TTTTAGCCTAATTTAAAAAA+TGG | - | Chr7:79549443-79549462 | MsG0780040586.01.T01:CDS | 15.0% |
| !! | GATAATTCAGTAAATAAATC+AGG | - | Chr7:79550295-79550314 | MsG0780040586.01.T01:CDS | 20.0% |
| !!! | CAAAATCAAAATATTTTGCA+GGG | - | Chr7:79549261-79549280 | MsG0780040586.01.T01:CDS | 20.0% |
| !!! | TCAAAATCAAAATATTTTGC+AGG | - | Chr7:79549260-79549279 | MsG0780040586.01.T01:CDS | 20.0% |
| !!! | TTATGGATTTAACTGTTTTT+TGG | - | Chr7:79548546-79548565 | MsG0780040586.01.T01:three_prime_UTR | 20.0% |
| !!! | TTGCTTCCATTTTTTAAATT+AGG | + | Chr7:79549452-79549471 | None:intergenic | 20.0% |
| !!! | TTTAGCCTTTAAATTATTAC+CGG | + | Chr7:79549120-79549139 | None:intergenic | 20.0% |
| !!! | TTTTTAAAATAGTCCTTGAA+GGG | - | Chr7:79549230-79549249 | MsG0780040586.01.T01:CDS | 20.0% |
| !!! | TTTTTTAAAATAGTCCTTGA+AGG | - | Chr7:79549229-79549248 | MsG0780040586.01.T01:CDS | 20.0% |
| ! | AAACACCGGTAATAATTTAA+AGG | - | Chr7:79549112-79549131 | MsG0780040586.01.T01:CDS | 25.0% |
| ! | AATGGTAAAAGAATAGGAAA+TGG | + | Chr7:79550601-79550620 | None:intergenic | 25.0% |
| ! | AATTTCATTTCAACAAGTAC+AGG | - | Chr7:79550319-79550338 | MsG0780040586.01.T01:CDS | 25.0% |
| ! | ATAACAAATGTGTTATACTG+AGG | - | Chr7:79550361-79550380 | MsG0780040586.01.T01:CDS | 25.0% |
| ! | CAAAGAAATGGTAAAAGAAT+AGG | + | Chr7:79550607-79550626 | None:intergenic | 25.0% |
| !! | AATCTTTTCATTAAGTGTTC+TGG | - | Chr7:79550768-79550787 | MsG0780040586.01.T01:CDS | 25.0% |
| !! | TGAACCTATTTTGTAGTTTT+TGG | + | Chr7:79549288-79549307 | None:intergenic | 25.0% |
| !! | TTTTCCTTTCTTGATATGTT+GGG | - | Chr7:79550643-79550662 | MsG0780040586.01.T01:CDS | 25.0% |
| !!! | AACTGTTTTTTGGTTGTTTT+AGG | - | Chr7:79548556-79548575 | MsG0780040586.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTTCAAGTTATTATCGGTT+TGG | - | Chr7:79548483-79548502 | MsG0780040586.01.T01:intron | 25.0% |
| AAGTACAGGTTATGAAAAGT+AGG | - | Chr7:79550333-79550352 | MsG0780040586.01.T01:CDS | 30.0% | |
| AATCCATCAAATTTACCTGT+TGG | + | Chr7:79550268-79550287 | None:intergenic | 30.0% | |
| ACATCTCTACAACAAAATGA+GGG | + | Chr7:79550714-79550733 | None:intergenic | 30.0% | |
| ATAGGGAGAATTAAATGAGA+TGG | + | Chr7:79548371-79548390 | None:intergenic | 30.0% | |
| ATATCCCAACATATCAAGAA+AGG | + | Chr7:79550650-79550669 | None:intergenic | 30.0% | |
| ATGCAAATCATCACAAAAGT+AGG | - | Chr7:79549325-79549344 | MsG0780040586.01.T01:CDS | 30.0% | |
| ATGCTTCTAAGTTCAAATCA+CGG | - | Chr7:79550498-79550517 | MsG0780040586.01.T01:CDS | 30.0% | |
| CTACAAAAATACCATCTAGT+TGG | - | Chr7:79550564-79550583 | MsG0780040586.01.T01:CDS | 30.0% | |
| GAATGTAATCACATATGTCT+TGG | - | Chr7:79549482-79549501 | MsG0780040586.01.T01:CDS | 30.0% | |
| GAGAAACGTAATCAAAGAAA+TGG | + | Chr7:79550619-79550638 | None:intergenic | 30.0% | |
| TGCAAATCATCACAAAAGTA+GGG | - | Chr7:79549326-79549345 | MsG0780040586.01.T01:CDS | 30.0% | |
| TGTTAGTAATTGGGATGATA+TGG | - | Chr7:79548748-79548767 | MsG0780040586.01.T01:CDS | 30.0% | |
| TTTCCAACAGGTAAATTTGA+TGG | - | Chr7:79550262-79550281 | MsG0780040586.01.T01:intron | 30.0% | |
| ! | GATGTGTATTGTTACTGATT+TGG | - | Chr7:79550729-79550748 | MsG0780040586.01.T01:intron | 30.0% |
| ! | GTGTCTGTATCTCTATTTTA+TGG | - | Chr7:79548529-79548548 | MsG0780040586.01.T01:three_prime_UTR | 30.0% |
| ! | GTTTTCCTTTCTTGATATGT+TGG | - | Chr7:79550642-79550661 | MsG0780040586.01.T01:CDS | 30.0% |
| ! | TGATTTACTGTGTTTTGTGT+AGG | - | Chr7:79549636-79549655 | MsG0780040586.01.T01:intron | 30.0% |
| !! | GTTTTGTGTAGGTATTGTTT+TGG | - | Chr7:79549647-79549666 | MsG0780040586.01.T01:intron | 30.0% |
| !! | TTTTGAAAATAGTCCCTTCA+AGG | + | Chr7:79549246-79549265 | None:intergenic | 30.0% |
| !!! | TAGGTATTGTTTTGGATTCT+GGG | - | Chr7:79549655-79549674 | MsG0780040586.01.T01:intron | 30.0% |
| AAATACCATCTAGTTGGTTG+AGG | - | Chr7:79550570-79550589 | MsG0780040586.01.T01:CDS | 35.0% | |
| AAGGCAGAATATGATGAATC+TGG | - | Chr7:79550454-79550473 | MsG0780040586.01.T01:CDS | 35.0% | |
| AATCATCACAAAAGTAGGGT+CGG | - | Chr7:79549330-79549349 | MsG0780040586.01.T01:CDS | 35.0% | |
| ACCTAGTAGCATGAAAATCA+AGG | - | Chr7:79550172-79550191 | MsG0780040586.01.T01:intron | 35.0% | |
| AGAAATTGTGAGGGATATGA+AGG | - | Chr7:79549827-79549846 | MsG0780040586.01.T01:intron | 35.0% | |
| AGCATGGGATTGTTAGTAAT+TGG | - | Chr7:79548738-79548757 | MsG0780040586.01.T01:intron | 35.0% | |
| AGGCAGAATATGATGAATCT+GGG | - | Chr7:79550455-79550474 | MsG0780040586.01.T01:CDS | 35.0% | |
| CAAAACGAGACATATTTGCA+AGG | - | Chr7:79549408-79549427 | MsG0780040586.01.T01:CDS | 35.0% | |
| CAAGATTGAAGGATAAACAC+CGG | - | Chr7:79549098-79549117 | MsG0780040586.01.T01:CDS | 35.0% | |
| CACATCTCTACAACAAAATG+AGG | + | Chr7:79550715-79550734 | None:intergenic | 35.0% | |
| CATCTCTACAACAAAATGAG+GGG | + | Chr7:79550713-79550732 | None:intergenic | 35.0% | |
| CATTTCCTGTGTACTATTGA+TGG | + | Chr7:79550481-79550500 | None:intergenic | 35.0% | |
| CCAAAACGAAACATATTTGC+AGG | + | Chr7:79549156-79549175 | None:intergenic | 35.0% | |
| GCATGGGATTGTTAGTAATT+GGG | - | Chr7:79548739-79548758 | MsG0780040586.01.T01:intron | 35.0% | |
| GGACAAAAAGATGCATATGT+TGG | - | Chr7:79548665-79548684 | MsG0780040586.01.T01:three_prime_UTR | 35.0% | |
| GGGACCAAAAACTACAAAAT+AGG | - | Chr7:79549281-79549300 | MsG0780040586.01.T01:CDS | 35.0% | |
| TAACAATCCCATGCTCAATT+GGG | + | Chr7:79548733-79548752 | None:intergenic | 35.0% | |
| TACAGGTTATGAAAAGTAGG+AGG | - | Chr7:79550336-79550355 | MsG0780040586.01.T01:CDS | 35.0% | |
| TATGGTAACATTGTGTTGAG+TGG | - | Chr7:79550089-79550108 | MsG0780040586.01.T01:intron | 35.0% | |
| TATTGCTCTTGATTATGAGC+AGG | - | Chr7:79549863-79549882 | MsG0780040586.01.T01:intron | 35.0% | |
| TCGAGTTAAATGTTGTCTCA+TGG | + | Chr7:79550034-79550053 | None:intergenic | 35.0% | |
| TGAAATACCCAATTGAGCAT+GGG | - | Chr7:79548723-79548742 | MsG0780040586.01.T01:intron | 35.0% | |
| TGAATAGCAACATACATAGC+AGG | + | Chr7:79548914-79548933 | None:intergenic | 35.0% | |
| TGTAATCACATATGTCTTGG+TGG | - | Chr7:79549485-79549504 | MsG0780040586.01.T01:CDS | 35.0% | |
| TTGAAATACCCAATTGAGCA+TGG | - | Chr7:79548722-79548741 | MsG0780040586.01.T01:intron | 35.0% | |
| TTTGCATACGTGACATATGA+TGG | + | Chr7:79549312-79549331 | None:intergenic | 35.0% | |
| ! | ACCTTGATTTTCATGCTACT+AGG | + | Chr7:79550176-79550195 | None:intergenic | 35.0% |
| ! | CCTGCAAATATGTTTCGTTT+TGG | - | Chr7:79549153-79549172 | MsG0780040586.01.T01:CDS | 35.0% |
| ! | CTTGCAAATATGTCTCGTTT+TGG | + | Chr7:79549410-79549429 | None:intergenic | 35.0% |
| !!! | AGCTTTTGATCAGAAGTGTT+GGG | + | Chr7:79548395-79548414 | None:intergenic | 35.0% |
| !!! | AGGTATTGTTTTGGATTCTG+GGG | - | Chr7:79549656-79549675 | MsG0780040586.01.T01:intron | 35.0% |
| !!! | ATTTTCTCACGATTAGCCTT+AGG | + | Chr7:79548860-79548879 | None:intergenic | 35.0% |
| !!! | GTAGGTATTGTTTTGGATTC+TGG | - | Chr7:79549654-79549673 | MsG0780040586.01.T01:intron | 35.0% |
| !!! | GTTTTTTGGTTGTTTTAGGC+TGG | - | Chr7:79548560-79548579 | MsG0780040586.01.T01:three_prime_UTR | 35.0% |
| !!! | TACTTTTTCTTGTGCAGATG+TGG | - | Chr7:79550425-79550444 | MsG0780040586.01.T01:CDS | 35.0% |
| AAGTTCCTCAACCAACTAGA+TGG | + | Chr7:79550578-79550597 | None:intergenic | 40.0% | |
| AATGTTGTCTCATGGATACC+AGG | + | Chr7:79550026-79550045 | None:intergenic | 40.0% | |
| AGTGCATATCCCTCGTAAAT+AGG | + | Chr7:79549702-79549721 | None:intergenic | 40.0% | |
| CGGTGTTTATCCTTCAATCT+TGG | + | Chr7:79549100-79549119 | None:intergenic | 40.0% | |
| CTAACAATCCCATGCTCAAT+TGG | + | Chr7:79548734-79548753 | None:intergenic | 40.0% | |
| GACATTAGGAAGGATCTCTA+TGG | - | Chr7:79550071-79550090 | MsG0780040586.01.T01:intron | 40.0% | |
| GAGGGATATGAAGGAGAAAT+TGG | - | Chr7:79549836-79549855 | MsG0780040586.01.T01:intron | 40.0% | |
| GATGAAGCACAATCAAAGAG+AGG | - | Chr7:79548689-79548708 | MsG0780040586.01.T01:three_prime_UTR | 40.0% | |
| TATTGCTGATAGGATGAGCA+AGG | - | Chr7:79550133-79550152 | MsG0780040586.01.T01:intron | 40.0% | |
| TCATCCTATCAGCAATACCA+GGG | + | Chr7:79550130-79550149 | None:intergenic | 40.0% | |
| TGAAGTGTGATGTCGACATT+AGG | - | Chr7:79550057-79550076 | MsG0780040586.01.T01:intron | 40.0% | |
| ! | AAGTGTTCTGGTTGTCATAG+TGG | - | Chr7:79550780-79550799 | MsG0780040586.01.T01:CDS | 40.0% |
| ! | AGTATGTAGCATCGAAACGT+TGG | + | Chr7:79549532-79549551 | None:intergenic | 40.0% |
| ! | CAAGTTGGCTTATGAAACGT+AGG | + | Chr7:79550888-79550907 | None:intergenic | 40.0% |
| ! | TGAAGCACCTCTTAATCCTA+AGG | - | Chr7:79548841-79548860 | MsG0780040586.01.T01:intron | 40.0% |
| !! | ATGAAGATTTTAACCGAGCG+TGG | - | Chr7:79549777-79549796 | MsG0780040586.01.T01:intron | 40.0% |
| !! | CGATTAGCCTTAGGATTAAG+AGG | + | Chr7:79548851-79548870 | None:intergenic | 40.0% |
| !! | GAGCTTTTGATCAGAAGTGT+TGG | + | Chr7:79548396-79548415 | None:intergenic | 40.0% |
| !!! | ATTGTTTTGGATTCTGGGGA+CGG | - | Chr7:79549660-79549679 | MsG0780040586.01.T01:intron | 40.0% |
| !!! | GCTTTTGATCAGAAGTGTTG+GGG | + | Chr7:79548394-79548413 | None:intergenic | 40.0% |
| !!! | TTGTTTTAGGCTGGTTTTGC+AGG | - | Chr7:79548569-79548588 | MsG0780040586.01.T01:three_prime_UTR | 40.0% |
| AAGACCTATGAGCTACCTGA+TGG | - | Chr7:79549921-79549940 | MsG0780040586.01.T01:intron | 45.0% | |
| AATAGAGATACAGACACCGC+CGG | + | Chr7:79548526-79548545 | None:intergenic | 45.0% | |
| AATTTCTCGCTCTGCTGAAG+TGG | + | Chr7:79549814-79549833 | None:intergenic | 45.0% | |
| ACACTCGACACCAAGATTGA+AGG | - | Chr7:79549087-79549106 | MsG0780040586.01.T01:CDS | 45.0% | |
| ACGGCTGGAACAAAACTTCT+GGG | + | Chr7:79549983-79550002 | None:intergenic | 45.0% | |
| AGCAGAGCGAGAAATTGTGA+GGG | - | Chr7:79549818-79549837 | MsG0780040586.01.T01:intron | 45.0% | |
| ATCCTTCGTTTGGATCTTGC+AGG | - | Chr7:79549732-79549751 | MsG0780040586.01.T01:intron | 45.0% | |
| ATCGTGATTACCTGTCCATC+AGG | + | Chr7:79549939-79549958 | None:intergenic | 45.0% | |
| ATCTCTCAGCACTTTCCAAC+AGG | - | Chr7:79550250-79550269 | MsG0780040586.01.T01:intron | 45.0% | |
| CACACGGTTCCTATTTACGA+GGG | - | Chr7:79549690-79549709 | MsG0780040586.01.T01:intron | 45.0% | |
| CTCATCCTATCAGCAATACC+AGG | + | Chr7:79550131-79550150 | None:intergenic | 45.0% | |
| GAGCAAGGAGATTACAGCAT+TGG | - | Chr7:79550148-79550167 | MsG0780040586.01.T01:intron | 45.0% | |
| GATGGACAGGTAATCACGAT+CGG | - | Chr7:79549939-79549958 | MsG0780040586.01.T01:intron | 45.0% | |
| GATTGATACCTTGACCATGC+CGG | + | Chr7:79548345-79548364 | None:intergenic | 45.0% | |
| GCAGTATTCCCTAGCATAGT+AGG | - | Chr7:79548608-79548627 | MsG0780040586.01.T01:three_prime_UTR | 45.0% | |
| GGAACAAAACTTCTGGGCAT+CGG | + | Chr7:79549977-79549996 | None:intergenic | 45.0% | |
| GGGATGATATGGAGAAGATC+TGG | - | Chr7:79548759-79548778 | MsG0780040586.01.T01:CDS | 45.0% | |
| GGTAACATTGTGTTGAGTGG+TGG | - | Chr7:79550092-79550111 | MsG0780040586.01.T01:intron | 45.0% | |
| GTGCTTCAGTGAGAAGAACA+GGG | + | Chr7:79548829-79548848 | None:intergenic | 45.0% | |
| GTGCTTTCACTTTATGCGAG+TGG | - | Chr7:79548938-79548957 | MsG0780040586.01.T01:intron | 45.0% | |
| GTGTGATGTCGACATTAGGA+AGG | - | Chr7:79550061-79550080 | MsG0780040586.01.T01:intron | 45.0% | |
| GTTCCGTTGTCGCAAACTAA+GGG | + | Chr7:79548323-79548342 | None:intergenic | 45.0% | |
| TCACACGGTTCCTATTTACG+AGG | - | Chr7:79549689-79549708 | MsG0780040586.01.T01:intron | 45.0% | |
| TCCAAACGAAGGATTGCATG+TGG | + | Chr7:79549726-79549745 | None:intergenic | 45.0% | |
| TCCACATGCAATCCTTCGTT+TGG | - | Chr7:79549722-79549741 | MsG0780040586.01.T01:intron | 45.0% | |
| TCTGATCAAAAGCTCGTGTC+TGG | - | Chr7:79548401-79548420 | MsG0780040586.01.T02:three_prime_UTR | 45.0% | |
| TGTTCCCTGGTATTGCTGAT+AGG | - | Chr7:79550123-79550142 | MsG0780040586.01.T01:intron | 45.0% | |
| ! | AAGTACAGTGTCTGGATTGG+AGG | - | Chr7:79550215-79550234 | MsG0780040586.01.T01:intron | 45.0% |
| ! | ACAGGGGTAATGGTTGGAAT+GGG | - | Chr7:79548644-79548663 | MsG0780040586.01.T01:three_prime_UTR | 45.0% |
| ! | AGAAGAACAGGGTGTTCTTC+AGG | + | Chr7:79548818-79548837 | None:intergenic | 45.0% |
| ! | AGGAAGTACAGTGTCTGGAT+TGG | - | Chr7:79550212-79550231 | MsG0780040586.01.T01:intron | 45.0% |
| ! | AGTGCTGAGAGATGCCAAAA+TGG | + | Chr7:79550243-79550262 | None:intergenic | 45.0% |
| ! | GCCATGTGATGATGCAAACT+AGG | - | Chr7:79549589-79549608 | MsG0780040586.01.T01:intron | 45.0% |
| ! | GCCTAGTTTGCATCATCACA+TGG | + | Chr7:79549593-79549612 | None:intergenic | 45.0% |
| ! | TGTGCAGATGTGGATTGCAA+AGG | - | Chr7:79550435-79550454 | MsG0780040586.01.T01:CDS | 45.0% |
| !! | CTGGATTGGAGGTTCCATTT+TGG | - | Chr7:79550226-79550245 | MsG0780040586.01.T01:intron | 45.0% |
| !! | GATCAGAAGTGTTGGGGATA+GGG | + | Chr7:79548388-79548407 | None:intergenic | 45.0% |
| !! | TGATCAGAAGTGTTGGGGAT+AGG | + | Chr7:79548389-79548408 | None:intergenic | 45.0% |
| !! | TTAGTTTGCGACAACGGAAC+CGG | - | Chr7:79548323-79548342 | MsG0780040586.01.T02:three_prime_UTR | 45.0% |
| AAATCACGGTGCATGAGAGC+TGG | - | Chr7:79550512-79550531 | MsG0780040586.01.T01:CDS | 50.0% | |
| ACACTGTACTTCCTCTCTGG+TGG | + | Chr7:79550206-79550225 | None:intergenic | 50.0% | |
| AGGAGATTCCATCCCGATCA+TGG | + | Chr7:79550006-79550025 | None:intergenic | 50.0% | |
| ATGATCGGGATGGAATCTCC+TGG | - | Chr7:79550005-79550024 | MsG0780040586.01.T01:intron | 50.0% | |
| ATGCTAGGGAATACTGCCCT+TGG | + | Chr7:79548605-79548624 | None:intergenic | 50.0% | |
| CAGACACTGTACTTCCTCTC+TGG | + | Chr7:79550209-79550228 | None:intergenic | 50.0% | |
| CAGCAGAGCGAGAAATTGTG+AGG | - | Chr7:79549817-79549836 | MsG0780040586.01.T01:intron | 50.0% | |
| CTGGGCCATCAATAGTACAC+AGG | - | Chr7:79550473-79550492 | MsG0780040586.01.T01:CDS | 50.0% | |
| CTGTCCATCAGGTAGCTCAT+AGG | + | Chr7:79549928-79549947 | None:intergenic | 50.0% | |
| GACCTGCAAGATCCAAACGA+AGG | + | Chr7:79549737-79549756 | None:intergenic | 50.0% | |
| GACGGCTGGAACAAAACTTC+TGG | + | Chr7:79549984-79550003 | None:intergenic | 50.0% | |
| GATTCCATCCCGATCATGGA+CGG | + | Chr7:79550002-79550021 | None:intergenic | 50.0% | |
| GGATGTGTCAGTGTCGTATC+CGG | - | Chr7:79548504-79548523 | MsG0780040586.01.T01:three_prime_UTR | 50.0% | |
| GGTGCATGAGAGCTGGATTA+AGG | - | Chr7:79550519-79550538 | MsG0780040586.01.T01:CDS | 50.0% | |
| GGTGCTTCAGTGAGAAGAAC+AGG | + | Chr7:79548830-79548849 | None:intergenic | 50.0% | |
| GGTGGTTCAACAATGTTCCC+TGG | - | Chr7:79550110-79550129 | MsG0780040586.01.T01:intron | 50.0% | |
| GGTTCCGTTGTCGCAAACTA+AGG | + | Chr7:79548324-79548343 | None:intergenic | 50.0% | |
| GTGGACGTCCTACTATGCTA+GGG | + | Chr7:79548619-79548638 | None:intergenic | 50.0% | |
| TATGCGAGTGGTCGTACAAC+TGG | - | Chr7:79548950-79548969 | MsG0780040586.01.T01:intron | 50.0% | |
| TGCAGGAGATGATGCACCAA+GGG | - | Chr7:79548586-79548605 | MsG0780040586.01.T01:three_prime_UTR | 50.0% | |
| TGTCCGACACAGATCAGTGT+CGG | - | Chr7:79548424-79548443 | MsG0780040586.01.T01:three_prime_UTR | 50.0% | |
| TGTCCGACACTGATCTGTGT+CGG | + | Chr7:79548430-79548449 | None:intergenic | 50.0% | |
| TTGCAGGAGATGATGCACCA+AGG | - | Chr7:79548585-79548604 | MsG0780040586.01.T01:three_prime_UTR | 50.0% | |
| TTGTTCCAGCCGTCCATGAT+CGG | - | Chr7:79549990-79550009 | MsG0780040586.01.T01:intron | 50.0% | |
| ! | CACAGGGGTAATGGTTGGAA+TGG | - | Chr7:79548643-79548662 | MsG0780040586.01.T01:three_prime_UTR | 50.0% |
| ! | CAGAGAGGAAGTACAGTGTC+TGG | - | Chr7:79550207-79550226 | MsG0780040586.01.T01:intron | 50.0% |
| ! | CTATGAGCTACCTGATGGAC+AGG | - | Chr7:79549926-79549945 | MsG0780040586.01.T01:intron | 50.0% |
| !! | CAATCTTGGTGTCGAGTGTC+TGG | + | Chr7:79549086-79549105 | None:intergenic | 50.0% |
| !! | CAGCCCTTAGTTTGCGACAA+CGG | - | Chr7:79548317-79548336 | MsG0780040586.01.T02:three_prime_UTR | 50.0% |
| ACCATTACCCCTGTGTGACG+TGG | + | Chr7:79548638-79548657 | None:intergenic | 55.0% | |
| AGGTTGTAGCACCACCAGAG+AGG | - | Chr7:79550192-79550211 | MsG0780040586.01.T01:intron | 55.0% | |
| CGTGGACGTCCTACTATGCT+AGG | + | Chr7:79548620-79548639 | None:intergenic | 55.0% | |
| TAGGACGTCCACGTCACACA+GGG | - | Chr7:79548627-79548646 | MsG0780040586.01.T01:three_prime_UTR | 55.0% | |
| TCCACGTCACACAGGGGTAA+TGG | - | Chr7:79548634-79548653 | MsG0780040586.01.T01:three_prime_UTR | 55.0% | |
| TGTGTCAGTGTCGTATCCGG+CGG | - | Chr7:79548507-79548526 | MsG0780040586.01.T01:three_prime_UTR | 55.0% | |
| TGTTCCAGCCGTCCATGATC+GGG | - | Chr7:79549991-79550010 | MsG0780040586.01.T01:intron | 55.0% | |
| ! | CGTCACACAGGGGTAATGGT+TGG | - | Chr7:79548638-79548657 | MsG0780040586.01.T01:three_prime_UTR | 55.0% |
| ! | GGTGAAAGTGTAGCCACGCT+CGG | + | Chr7:79549793-79549812 | None:intergenic | 55.0% |
| ! | TGGGGACGGTGTTAGTCACA+CGG | - | Chr7:79549674-79549693 | MsG0780040586.01.T01:intron | 55.0% |
| AGGACGTCCACGTCACACAG+GGG | - | Chr7:79548628-79548647 | MsG0780040586.01.T01:three_prime_UTR | 60.0% | |
| CAACGGAACCGGCATGGTCA+AGG | - | Chr7:79548334-79548353 | MsG0780040586.01.T02:three_prime_UTR | 60.0% | |
| GTAGGACGTCCACGTCACAC+AGG | - | Chr7:79548626-79548645 | MsG0780040586.01.T01:three_prime_UTR | 60.0% | |
| TTGCGACAACGGAACCGGCA+TGG | - | Chr7:79548328-79548347 | MsG0780040586.01.T02:three_prime_UTR | 60.0% | |
| CCAGCCGTCCATGATCGGGA+TGG | - | Chr7:79549995-79550014 | MsG0780040586.01.T01:intron | 65.0% | |
| CCATCCCGATCATGGACGGC+TGG | + | Chr7:79549998-79550017 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 79548296 | 79550957 | 79548296 | ID=MsG0780040586.01;Name=MsG0780040586.01 |
| Chr7 | mRNA | 79548423 | 79550957 | 79548423 | ID=MsG0780040586.01.T01;Parent=MsG0780040586.01;Name=MsG0780040586.01.T01;_AED=0.23;_eAED=0.30;_QI=0|0.8|0.83|1|0.6|0.5|6|270|425 |
| Chr7 | exon | 79548423 | 79548470 | 79548423 | ID=MsG0780040586.01.T01:exon:16307;Parent=MsG0780040586.01.T01 |
| Chr7 | exon | 79548499 | 79548719 | 79548499 | ID=MsG0780040586.01.T01:exon:16306;Parent=MsG0780040586.01.T01 |
| Chr7 | exon | 79548745 | 79548811 | 79548745 | ID=MsG0780040586.01.T01:exon:16305;Parent=MsG0780040586.01.T01 |
| Chr7 | CDS | 79550754 | 79550957 | 79550754 | ID=MsG0780040586.01.T01:cds;Parent=MsG0780040586.01.T01 |
| Chr7 | CDS | 79550282 | 79550675 | 79550282 | ID=MsG0780040586.01.T01:cds;Parent=MsG0780040586.01.T01 |
| Chr7 | CDS | 79548982 | 79549595 | 79548982 | ID=MsG0780040586.01.T01:cds;Parent=MsG0780040586.01.T01 |
| Chr7 | CDS | 79548746 | 79548811 | 79548746 | ID=MsG0780040586.01.T01:cds;Parent=MsG0780040586.01.T01 |
| Chr7 | three_prime_UTR | 79548745 | 79548745 | 79548745 | ID=MsG0780040586.01.T01:three_prime_utr;Parent=MsG0780040586.01.T01 |
| Chr7 | three_prime_UTR | 79548499 | 79548719 | 79548499 | ID=MsG0780040586.01.T01:three_prime_utr;Parent=MsG0780040586.01.T01 |
| Chr7 | three_prime_UTR | 79548423 | 79548470 | 79548423 | ID=MsG0780040586.01.T01:three_prime_utr;Parent=MsG0780040586.01.T01 |
| Chr7 | mRNA | 79548296 | 79550957 | 79548296 | ID=MsG0780040586.01.T02;Parent=MsG0780040586.01;Name=MsG0780040586.01.T02;_AED=0.20;_eAED=0.27;_QI=0|0.66|0.75|1|1|1|4|450|425 |
| Chr7 | exon | 79548296 | 79548811 | 79548296 | ID=MsG0780040586.01.T02:exon:16308;Parent=MsG0780040586.01.T02 |
| Chr7 | CDS | 79550754 | 79550957 | 79550754 | ID=MsG0780040586.01.T02:cds;Parent=MsG0780040586.01.T02 |
| Chr7 | CDS | 79550282 | 79550675 | 79550282 | ID=MsG0780040586.01.T02:cds;Parent=MsG0780040586.01.T02 |
| Chr7 | CDS | 79548982 | 79549595 | 79548982 | ID=MsG0780040586.01.T02:cds;Parent=MsG0780040586.01.T02 |
| Chr7 | CDS | 79548746 | 79548811 | 79548746 | ID=MsG0780040586.01.T02:cds;Parent=MsG0780040586.01.T02 |
| Chr7 | three_prime_UTR | 79548296 | 79548745 | 79548296 | ID=MsG0780040586.01.T02:three_prime_utr;Parent=MsG0780040586.01.T02 |
| Gene Sequence |
| Protein sequence |
