AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040854.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040854.01.T01 MTR_7g099830 86.207 435 11 2 1 415 38 443 0.0 632
MsG0780040854.01.T01 MTR_1g069000 56.303 476 113 13 1 414 38 480 4.04e-163 468
MsG0780040854.01.T01 MTR_8g067090 40.171 117 53 3 1 114 44 146 5.80e-16 79.7
MsG0780040854.01.T01 MTR_8g471120 40.171 117 53 3 1 114 44 146 5.80e-16 79.7
MsG0780040854.01.T01 MTR_8g067080 44.595 74 41 0 1 74 44 117 2.10e-15 77.8
MsG0780040854.01.T01 MTR_8g067080 44.595 74 41 0 1 74 44 117 2.18e-15 77.8
MsG0780040854.01.T01 MTR_8g471110 44.595 74 41 0 1 74 44 117 2.18e-15 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040854.01.T01 AT2G37550 52.212 452 144 12 1 414 38 455 6.32e-131 385
MsG0780040854.01.T01 AT2G37550 52.212 452 144 12 1 414 38 455 6.32e-131 385
MsG0780040854.01.T01 AT3G53710 51.844 461 135 17 1 414 38 458 5.20e-124 367
MsG0780040854.01.T01 AT3G53710 51.844 461 135 17 1 414 38 458 5.20e-124 367
MsG0780040854.01.T01 AT3G53710 51.844 461 135 17 1 414 38 458 5.20e-124 367
MsG0780040854.01.T01 AT4G17890 46.429 84 40 1 1 79 47 130 2.98e-16 80.5
MsG0780040854.01.T01 AT4G17890 46.429 84 40 1 1 79 47 130 4.21e-16 80.1
MsG0780040854.01.T01 AT5G46750 45.238 84 41 1 1 79 44 127 1.27e-15 78.6
MsG0780040854.01.T01 AT2G35210 48.649 74 38 0 1 74 44 117 1.40e-15 78.6
MsG0780040854.01.T01 AT2G35210 42.857 91 48 2 1 87 44 134 2.81e-15 77.4

Find 148 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTCCGGTAATAGTAAAAT+TGG 0.196496 7:+83398845 None:intergenic
GTGGTGGTTGGGATGATAAT+TGG 0.288748 7:-83402517 MsG0780040854.01.T01:CDS
AAATTCATCATCGTCATCTT+TGG 0.293774 7:+83400057 None:intergenic
CAGAGTACTGGTGATGTAAT+TGG 0.303983 7:-83402431 MsG0780040854.01.T01:CDS
GTTCTTCCTTCCTTGTATCT+TGG 0.306753 7:+83400134 None:intergenic
ATTCCCATTCGGGTAATCTT+TGG 0.308780 7:+83400309 None:intergenic
CTCAAGCAAGGCTCTAATTA+TGG 0.316863 7:+83400850 None:intergenic
CGATCTCCAGATCAAGAAAA+TGG 0.320437 7:-83402762 MsG0780040854.01.T01:CDS
GAATTTGATGATAAATCTTT+TGG 0.327269 7:-83400040 MsG0780040854.01.T01:CDS
GCCGAGGCCACGGTGTTTGC+CGG 0.343680 7:+83402829 None:intergenic
GGTGGGAAGTATGTTGGATT+TGG 0.343971 7:-83402247 MsG0780040854.01.T01:CDS
ACTCAAACTCTTGGGATGAT+TGG 0.347103 7:-83400162 MsG0780040854.01.T01:CDS
TCTGGTCAATAGCTGGGTTT+TGG 0.348103 7:-83400926 MsG0780040854.01.T01:intron
CGCGTGGTGGTGGTGATATT+AGG 0.356783 7:-83402460 MsG0780040854.01.T01:CDS
CATAATGGGACGTCAGGTTC+TGG 0.362771 7:-83400016 MsG0780040854.01.T01:CDS
TTCTCAATACGGAATCTCTA+AGG 0.367159 7:-83402705 MsG0780040854.01.T01:CDS
GTTGGATTTGGATCTAGTCC+TGG 0.369759 7:-83402235 MsG0780040854.01.T01:CDS
ATCAATTCTTCCTGCACATA+TGG 0.378287 7:+83399025 None:intergenic
CAGGAAGAATTGATTCTTTG+AGG 0.382545 7:-83399016 MsG0780040854.01.T01:three_prime_UTR
TGGTGGTTGGGATGATAATT+GGG 0.396409 7:-83402516 MsG0780040854.01.T01:CDS
TACATTAGGGAAGGAAGAAT+GGG 0.399832 7:+83398958 None:intergenic
TGATGAAGGTTGTCCTTCTC+TGG 0.401226 7:+83400207 None:intergenic
ATTAAAAGTTTCAAAGCAAA+GGG 0.403317 7:-83398877 MsG0780040854.01.T01:three_prime_UTR
TCCTCATAATAATGATGATT+GGG 0.405151 7:-83400095 MsG0780040854.01.T01:CDS
CTCAAACTCTTGGGATGATT+GGG 0.405409 7:-83400161 MsG0780040854.01.T01:CDS
CGAATGGGAATTCTGATAAC+TGG 0.408968 7:-83400297 MsG0780040854.01.T01:CDS
GGTGATGTAATTGGATTTGT+TGG 0.409468 7:-83402422 MsG0780040854.01.T01:CDS
ACGTCAGGTTCTGGCTGGAC+AGG 0.413255 7:-83400007 MsG0780040854.01.T01:CDS
TAATGATGATTGGGCTGGTT+GGG 0.416996 7:-83400086 MsG0780040854.01.T01:CDS
TCCGGCAAACACCGTGGCCT+CGG 0.417844 7:-83402830 MsG0780040854.01.T01:CDS
CTCCTCATAATAATGATGAT+TGG 0.428305 7:-83400096 MsG0780040854.01.T01:CDS
GTATAATTCAAATGCTGCTT+CGG 0.429421 7:-83402663 MsG0780040854.01.T01:CDS
ATCCCAAGAGTTTGAGTGAT+AGG 0.432160 7:+83400168 None:intergenic
GCGTGATCCACCTGTTGTTA+AGG 0.434361 7:-83402597 MsG0780040854.01.T01:CDS
GATGGTGATAGTTATGGTTA+TGG 0.442183 7:-83402485 MsG0780040854.01.T01:CDS
AACACGTTCCTTTCTCAATA+CGG 0.445873 7:-83402716 MsG0780040854.01.T01:CDS
ACAGGAGGAGGCTTTCACTA+AGG 0.450059 7:-83399989 MsG0780040854.01.T01:intron
ATACCTATCACTCAAACTCT+TGG 0.450157 7:-83400171 MsG0780040854.01.T01:CDS
TTTGGTCATAATGGGACGTC+AGG 0.452576 7:-83400022 MsG0780040854.01.T01:CDS
CAGTTATCAGAATTCCCATT+CGG 0.453777 7:+83400298 None:intergenic
GCTAGTACTCGTGCTGGAAA+AGG 0.455171 7:-83402569 MsG0780040854.01.T01:CDS
AGCAGCATTTGAATTATACT+TGG 0.456159 7:+83402667 None:intergenic
GTAATTGGATTTGTTGGAAG+TGG 0.458947 7:-83402416 MsG0780040854.01.T01:CDS
TTACATTAGGGAAGGAAGAA+TGG 0.459139 7:+83398957 None:intergenic
TGAGGAGCTGATCCTTTAGC+TGG 0.460566 7:+83400112 None:intergenic
GGTTCTGGCTGGACAGGAGG+AGG 0.461646 7:-83400001 MsG0780040854.01.T01:CDS
GTCTTCCTCCGTCGCAGGGT+GGG 0.462412 7:-83402264 MsG0780040854.01.T01:CDS
TAGAGATTCCGTATTGAGAA+AGG 0.463462 7:+83402708 None:intergenic
CTAGCATTCTCCTTAACAAC+AGG 0.465760 7:+83402587 None:intergenic
GGAGAGTCTTCCTCCGTCGC+AGG 0.472411 7:-83402269 MsG0780040854.01.T01:CDS
GCATACATGTCAAGCAGGGC+TGG 0.477832 7:-83399115 MsG0780040854.01.T01:three_prime_UTR
CATTAAAAGTTTCAAAGCAA+AGG 0.479121 7:-83398878 MsG0780040854.01.T01:three_prime_UTR
AAAATATGGTTTCAGATTGG+TGG 0.481076 7:-83399137 MsG0780040854.01.T01:three_prime_UTR
GATCCGTTACAATGGATTCA+TGG 0.484084 7:-83402787 MsG0780040854.01.T01:CDS
TGGAAAAGGAAAGCCACCTC+TGG 0.486965 7:-83402555 MsG0780040854.01.T01:CDS
CATGGCGTTGGCCTCTCAAA+AGG 0.490970 7:-83400344 MsG0780040854.01.T01:CDS
GCCCAATCATCATTATTATG+AGG 0.492124 7:+83400094 None:intergenic
TACCTATCACTCAAACTCTT+GGG 0.496672 7:-83400170 MsG0780040854.01.T01:CDS
TTGGATTTGGATCTAGTCCT+GGG 0.501961 7:-83402234 MsG0780040854.01.T01:CDS
TTAGTTTGTCCACCTGATGA+AGG 0.509540 7:+83400193 None:intergenic
AATGATGATGGTGATAGTTA+TGG 0.511012 7:-83402491 MsG0780040854.01.T01:CDS
GAGAATGCTAGTACTCGTGC+TGG 0.511201 7:-83402575 MsG0780040854.01.T01:CDS
TGAGGAGAAATCCTTTGAGC+AGG 0.512110 7:+83402211 None:intergenic
CGTCCGGTAATAGTAAAATT+GGG 0.515773 7:+83398846 None:intergenic
TTATCTGTCTGTTGTTTCTG+AGG 0.516783 7:-83402182 MsG0780040854.01.T01:intron
TGGTGGCATACATGTCAAGC+AGG 0.517257 7:-83399120 MsG0780040854.01.T01:three_prime_UTR
CTACGTCGAATGGTGGTGGT+TGG 0.519909 7:-83402529 MsG0780040854.01.T01:CDS
CGATCGCGGAAGGTCGTTCG+TGG 0.522521 7:-83402619 MsG0780040854.01.T01:CDS
AGATGTGAACGCCGAGGCCA+CGG 0.522534 7:+83402819 None:intergenic
GGACATGGGGTATAATGAAA+GGG 0.522706 7:-83400369 MsG0780040854.01.T01:CDS
TACGTCGAATGGTGGTGGTT+GGG 0.524169 7:-83402528 MsG0780040854.01.T01:CDS
CTAGTCCTGGGCCTGCTCAA+AGG 0.524286 7:-83402222 MsG0780040854.01.T01:CDS
CAAAACTATAGTTGACAGTC+TGG 0.525630 7:+83399071 None:intergenic
TCACCAAAGATTACCCGAAT+GGG 0.525967 7:-83400312 MsG0780040854.01.T01:CDS
ACTCAGAAGACATCAGAGAT+TGG 0.527015 7:-83400397 MsG0780040854.01.T01:CDS
TTTGGGATCTTCTGTATGGT+CGG 0.531119 7:-83398914 MsG0780040854.01.T01:three_prime_UTR
ATGGGACGTCAGGTTCTGGC+TGG 0.534980 7:-83400012 MsG0780040854.01.T01:CDS
CCTCTGGCTGCTACGTCGAA+TGG 0.535310 7:-83402539 MsG0780040854.01.T01:CDS
GGGTATAATGAAAGGGGTCA+TGG 0.536054 7:-83400362 MsG0780040854.01.T01:CDS
CGCATTCAAGCGATCGCGGA+AGG 0.537050 7:-83402629 MsG0780040854.01.T01:CDS
AGTTATCAGAATTCCCATTC+GGG 0.537129 7:+83400299 None:intergenic
TACTTCCCACCCTGCGACGG+AGG 0.538040 7:+83402259 None:intergenic
CAGAGATTGGACAAAGGACA+TGG 0.538329 7:-83400384 MsG0780040854.01.T01:CDS
AGAGAAGGACAACCTTCATC+AGG 0.539207 7:-83400205 MsG0780040854.01.T01:CDS
GGGAATTGGTAAATTGTCCA+TGG 0.539257 7:-83402047 MsG0780040854.01.T01:CDS
GAAATCCTTTGAGCAGGCCC+AGG 0.541666 7:+83402217 None:intergenic
AAATCAGCCTCCATATGTGC+AGG 0.543897 7:-83399035 MsG0780040854.01.T01:three_prime_UTR
GGTTATGGATCGCGTGGTGG+TGG 0.546645 7:-83402470 MsG0780040854.01.T01:CDS
ATTAGGAGGAATCAGAGTAC+TGG 0.548491 7:-83402443 MsG0780040854.01.T01:CDS
CAGATCAAGAAAATGGAAGC+AGG 0.550806 7:-83402755 MsG0780040854.01.T01:CDS
CATAATAATGATGATTGGGC+TGG 0.551691 7:-83400091 MsG0780040854.01.T01:CDS
TCGCAGGGTGGGAAGTATGT+TGG 0.551854 7:-83402253 MsG0780040854.01.T01:CDS
AAAGGAACGTGTTGAGATTG+CGG 0.551893 7:+83402726 None:intergenic
TGCGACGGAGGAAGACTCTC+CGG 0.552924 7:+83402271 None:intergenic
TCTTCTACTTCTACCAGAGA+AGG 0.557439 7:-83400220 MsG0780040854.01.T01:CDS
AATGAAAGGGGTCATGGCGT+TGG 0.559488 7:-83400356 MsG0780040854.01.T01:CDS
GTGGAGTTACACCTTCGTCC+AGG 0.560060 7:-83402397 MsG0780040854.01.T01:intron
ATAATGTTTCATCACACGTC+CGG 0.562204 7:+83398830 None:intergenic
GCTGCTACGTCGAATGGTGG+TGG 0.564958 7:-83402533 MsG0780040854.01.T01:CDS
AGGAAGGAAGAACCAGCTAA+AGG 0.565852 7:-83400124 MsG0780040854.01.T01:CDS
GTTGGCCTCTCAAAAGGTTG+AGG 0.569071 7:-83400338 MsG0780040854.01.T01:CDS
TCAATCAAGAGAATAAAAGC+TGG 0.569255 7:-83400246 MsG0780040854.01.T01:CDS
GGCGGAGAATGAATCGAGAC+CGG 0.572935 7:-83402290 MsG0780040854.01.T01:CDS
TTCACCAAAGATTACCCGAA+TGG 0.575200 7:-83400313 MsG0780040854.01.T01:CDS
CTTCGTCCGATCCGTTACAA+TGG 0.578327 7:-83402795 MsG0780040854.01.T01:CDS
AGGACATGGGGTATAATGAA+AGG 0.578601 7:-83400370 MsG0780040854.01.T01:CDS
GCATTCTCCTTAACAACAGG+TGG 0.583281 7:+83402590 None:intergenic
AGTCTTCCTCCGTCGCAGGG+TGG 0.583357 7:-83402265 MsG0780040854.01.T01:CDS
GATAATTGGGATAATGATGA+TGG 0.583376 7:-83402503 MsG0780040854.01.T01:CDS
GAGAGTCTTCCTCCGTCGCA+GGG 0.585493 7:-83402268 MsG0780040854.01.T01:CDS
ATAATGATGATTGGGCTGGT+TGG 0.587457 7:-83400087 MsG0780040854.01.T01:CDS
CATTGTAACGGATCGGACGA+AGG 0.591479 7:+83402796 None:intergenic
TCCCTAGTTCACCTCAAGCA+AGG 0.595430 7:+83400838 None:intergenic
CGATCGCATTCAAGCGATCG+CGG 0.597188 7:-83402633 MsG0780040854.01.T01:CDS
GTCGATTTCGACCTGGACGA+AGG 0.600405 7:+83402386 None:intergenic
TCAGGTTCTGGCTGGACAGG+AGG 0.603150 7:-83400004 MsG0780040854.01.T01:CDS
ACATACTTCCCACCCTGCGA+CGG 0.603399 7:+83402256 None:intergenic
TCCTTTCAGGTAAAGGACGG+TGG 0.603434 7:-83400457 MsG0780040854.01.T01:intron
AATTCTTCCTGCACATATGG+AGG 0.604113 7:+83399028 None:intergenic
GTGGTGGTGGTGATATTAGG+AGG 0.604239 7:-83402457 MsG0780040854.01.T01:CDS
TTCATGTGTCTCGAATGCTC+CGG 0.604613 7:-83402848 MsG0780040854.01.T01:CDS
CATAATTAGAGCCTTGCTTG+AGG 0.606067 7:-83400849 MsG0780040854.01.T01:intron
AGTAGCAGATTGAGCAACCA+TGG 0.614562 7:+83402030 None:intergenic
GCTAAATTTACTAGAACCAA+CGG 0.615864 7:+83400874 None:intergenic
CGATCGCTTGAATGCGATCG+CGG 0.616517 7:+83402636 None:intergenic
ATTGGGACAACCAAGATACA+AGG 0.625922 7:-83400144 MsG0780040854.01.T01:CDS
TACTAAAGAGATCACTGCCA+AGG 0.625987 7:-83402011 MsG0780040854.01.T01:intron
ATGAATCCATTGTAACGGAT+CGG 0.627111 7:+83402789 None:intergenic
GGACCATGAATCCATTGTAA+CGG 0.633410 7:+83402784 None:intergenic
AGAGATTGGACAAAGGACAT+GGG 0.640988 7:-83400383 MsG0780040854.01.T01:CDS
GAAGGACAACCTTCATCAGG+TGG 0.644075 7:-83400202 MsG0780040854.01.T01:CDS
TTCGACGTAGCAGCCAGAGG+TGG 0.648406 7:+83402542 None:intergenic
CTGGCTGCTACGTCGAATGG+TGG 0.665583 7:-83402536 MsG0780040854.01.T01:CDS
ACAGACAGATAATCATTCTG+AGG 0.672182 7:+83402193 None:intergenic
GGACAACCAAGATACAAGGA+AGG 0.673526 7:-83400140 MsG0780040854.01.T01:CDS
GAGATTGGACAAAGGACATG+GGG 0.675059 7:-83400382 MsG0780040854.01.T01:CDS
AGACATCAGAGATTGGACAA+AGG 0.675530 7:-83400390 MsG0780040854.01.T01:CDS
AGTTATGGTTATGGATCGCG+TGG 0.677987 7:-83402476 MsG0780040854.01.T01:CDS
GGACGGTGGTTATGATCACA+AGG 0.683948 7:-83400443 MsG0780040854.01.T01:CDS
GACATGGGGTATAATGAAAG+GGG 0.684113 7:-83400368 MsG0780040854.01.T01:CDS
GGTGGCATACATGTCAAGCA+GGG 0.685121 7:-83399119 MsG0780040854.01.T01:three_prime_UTR
CCATTCGACGTAGCAGCCAG+AGG 0.687181 7:+83402539 None:intergenic
ATCAAGAAAATGGAAGCAGG+CGG 0.690027 7:-83402752 MsG0780040854.01.T01:CDS
TATGGTTATGGATCGCGTGG+TGG 0.695048 7:-83402473 MsG0780040854.01.T01:CDS
GAATGCTCCGGCAAACACCG+TGG 0.703523 7:-83402836 MsG0780040854.01.T01:CDS
CGAAGGAGATGTGAACGCCG+AGG 0.708021 7:+83402813 None:intergenic
TTAAAAGTTTCAAAGCAAAG+GGG 0.714609 7:-83398876 MsG0780040854.01.T01:three_prime_UTR
ACATTAGGGAAGGAAGAATG+GGG 0.730797 7:+83398959 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAGAAAAGTAATTAGAT+TGG + Chr7:83401817-83401836 None:intergenic 15.0%
!! AGCAAAAAAATATTACATTA+GGG + Chr7:83402702-83402721 None:intergenic 15.0%
!! ATTAATTATACAAATTACCT+TGG + Chr7:83399653-83399672 None:intergenic 15.0%
!! ATTTATAAGTTTATTAGTTC+AGG + Chr7:83402234-83402253 None:intergenic 15.0%
!!! AAAAATAACATTTTGTCAAA+CGG - Chr7:83401735-83401754 MsG0780040854.01.T01:intron 15.0%
!!! ACACTTTTATAGAAAAAAAT+AGG + Chr7:83399697-83399716 None:intergenic 15.0%
!!! ATATTTTATTCTGATTTTAG+GGG - Chr7:83401918-83401937 MsG0780040854.01.T01:intron 15.0%
!!! CATATTTTATTCTGATTTTA+GGG - Chr7:83401917-83401936 MsG0780040854.01.T01:intron 15.0%
!!! TCATATTTTATTCTGATTTT+AGG - Chr7:83401916-83401935 MsG0780040854.01.T01:intron 15.0%
!!! TTGAATTTTATGTTTATGTT+CGG - Chr7:83400315-83400334 MsG0780040854.01.T01:CDS 15.0%
!! AAAAAATATTACATTAGGGA+AGG + Chr7:83402698-83402717 None:intergenic 20.0%
!! AAAATCAAGAAAAAACTTGA+AGG + Chr7:83400164-83400183 None:intergenic 20.0%
!! AAAGTAATTAGATTGGATTT+AGG + Chr7:83401810-83401829 None:intergenic 20.0%
!! AAATCAAGAAAAAACTTGAA+GGG + Chr7:83400163-83400182 None:intergenic 20.0%
!! ATTAAAAGTTTCAAAGCAAA+GGG - Chr7:83402767-83402786 MsG0780040854.01.T01:CDS 20.0%
!! CAACAAAAAATACAAGATAA+AGG - Chr7:83402173-83402192 MsG0780040854.01.T01:intron 20.0%
!! CAGCAAAAAAATATTACATT+AGG + Chr7:83402703-83402722 None:intergenic 20.0%
!! TAATTTAGGGAATATTGTTA+CGG - Chr7:83402272-83402291 MsG0780040854.01.T01:CDS 20.0%
!! TAGTTAAAACAAAGGATAAA+AGG + Chr7:83400504-83400523 None:intergenic 20.0%
!! TGCGTGAATAAATTATTTAA+TGG - Chr7:83400120-83400139 MsG0780040854.01.T01:CDS 20.0%
!!! AAAATAACATTTTGTCAAAC+GGG - Chr7:83401736-83401755 MsG0780040854.01.T01:intron 20.0%
!!! ATAAATCTTTTGGTCATAAT+GGG - Chr7:83401614-83401633 MsG0780040854.01.T01:intron 20.0%
!!! CTATGTTTTGTTTGTTTTTA+GGG - Chr7:83399577-83399596 MsG0780040854.01.T01:intron 20.0%
!!! GAATTTGATGATAAATCTTT+TGG - Chr7:83401604-83401623 MsG0780040854.01.T01:intron 20.0%
!!! TCTATGTTTTGTTTGTTTTT+AGG - Chr7:83399576-83399595 MsG0780040854.01.T01:intron 20.0%
!!! TTAAGAAAATTAGAGCTTTT+AGG - Chr7:83401046-83401065 MsG0780040854.01.T01:intron 20.0%
!!! TTGATAATATTCTTGAATCA+GGG - Chr7:83402440-83402459 MsG0780040854.01.T01:CDS 20.0%
! AATCAAGAAAAAACTTGAAG+GGG + Chr7:83400162-83400181 None:intergenic 25.0%
! ACAAAAATATGGTTTCAGAT+TGG - Chr7:83402504-83402523 MsG0780040854.01.T01:CDS 25.0%
! AGGAAAAAATATAGTCAAAC+AGG + Chr7:83401171-83401190 None:intergenic 25.0%
! ATATGTAAAAGAGATGATGT+AGG - Chr7:83402132-83402151 MsG0780040854.01.T01:intron 25.0%
! ATTAGCAGACAAATCATATT+AGG + Chr7:83400699-83400718 None:intergenic 25.0%
! CAAAAATTGACACTGAAAAA+AGG + Chr7:83402475-83402494 None:intergenic 25.0%
! CATTAAAAGTTTCAAAGCAA+AGG - Chr7:83402766-83402785 MsG0780040854.01.T01:CDS 25.0%
! GAACAATACAGAAATAATAG+AGG + Chr7:83400074-83400093 None:intergenic 25.0%
! TACTGTCTCAGTTATATTTA+AGG - Chr7:83400222-83400241 MsG0780040854.01.T01:CDS 25.0%
! TCCTCATAATAATGATGATT+GGG - Chr7:83401549-83401568 MsG0780040854.01.T01:intron 25.0%
! TGTCGTAATTGACAAAAATA+TGG - Chr7:83402493-83402512 MsG0780040854.01.T01:CDS 25.0%
! TTAAAAGTTTCAAAGCAAAG+GGG - Chr7:83402768-83402787 MsG0780040854.01.T01:CDS 25.0%
! TTCAGTCATAGTTAAAACAA+AGG + Chr7:83400512-83400531 None:intergenic 25.0%
! TTCTGTATTGTTCAACTAAT+TGG - Chr7:83400081-83400100 MsG0780040854.01.T01:CDS 25.0%
!! AAATAACATTTTGTCAAACG+GGG - Chr7:83401737-83401756 MsG0780040854.01.T01:intron 25.0%
!! CTTGATAATATTCTTGAATC+AGG - Chr7:83402439-83402458 MsG0780040854.01.T01:CDS 25.0%
!! GATAAATCTTTTGGTCATAA+TGG - Chr7:83401613-83401632 MsG0780040854.01.T01:intron 25.0%
!! TGTCTATCATTTTCATTTTG+TGG + Chr7:83401373-83401392 None:intergenic 25.0%
!!! CAAGTTTTTTCTTGATTTTG+AGG - Chr7:83400165-83400184 MsG0780040854.01.T01:CDS 25.0%
!!! CCATGTTTTAGATTTGAAAA+TGG - Chr7:83400661-83400680 MsG0780040854.01.T01:intron 25.0%
!!! CCATTTTCAAATCTAAAACA+TGG + Chr7:83400664-83400683 None:intergenic 25.0%
!!! CTGAAATCTTATTTTGTTGA+GGG - Chr7:83400974-83400993 MsG0780040854.01.T01:intron 25.0%
!!! CTTTGCTTTGAAACTTTTAA+TGG + Chr7:83402768-83402787 None:intergenic 25.0%
!!! GTTTTGTTTTCGTGTTTTAT+GGG - Chr7:83399524-83399543 MsG0780040854.01.T01:intron 25.0%
!!! TATTTTTTCCTTTCAGGTAA+AGG - Chr7:83401180-83401199 MsG0780040854.01.T01:intron 25.0%
!!! TGACTATATTTTTTCCTTTC+AGG - Chr7:83401174-83401193 MsG0780040854.01.T01:intron 25.0%
!!! TGTTTTGTTTTCGTGTTTTA+TGG - Chr7:83399523-83399542 MsG0780040854.01.T01:intron 25.0%
!!! TTTGTTTGTTTTTAGGGAAT+TGG - Chr7:83399583-83399602 MsG0780040854.01.T01:intron 25.0%
!!! TTTTTTGCTGTCATTGTTTT+GGG - Chr7:83402713-83402732 MsG0780040854.01.T01:CDS 25.0%
!!! TTTTTTTGCTGTCATTGTTT+TGG - Chr7:83402712-83402731 MsG0780040854.01.T01:CDS 25.0%
AAAATATGGTTTCAGATTGG+TGG - Chr7:83402507-83402526 MsG0780040854.01.T01:CDS 30.0%
AAATTCATCATCGTCATCTT+TGG + Chr7:83401590-83401609 None:intergenic 30.0%
AATTGACACTGAAAAAAGGT+AGG + Chr7:83402471-83402490 None:intergenic 30.0%
ACATTAACAGCAAAAACATG+AGG + Chr7:83400008-83400027 None:intergenic 30.0%
ACCAATTCTCAAACTCTTTA+AGG - Chr7:83400254-83400273 MsG0780040854.01.T01:CDS 30.0%
ACCTTAAAGAGTTTGAGAAT+TGG + Chr7:83400258-83400277 None:intergenic 30.0%
AGCAGCATTTGAATTATACT+TGG + Chr7:83398980-83398999 None:intergenic 30.0%
AGGTATGTAAATGATATCCA+TGG + Chr7:83401790-83401809 None:intergenic 30.0%
ATAACTAAGATTTGACCGAA+TGG - Chr7:83400843-83400862 MsG0780040854.01.T01:intron 30.0%
ATCAAGAAAAAACTTGAAGG+GGG + Chr7:83400161-83400180 None:intergenic 30.0%
ATCGTATTTCTCCATTCATA+TGG - Chr7:83401103-83401122 MsG0780040854.01.T01:intron 30.0%
ATTGACACTGAAAAAAGGTA+GGG + Chr7:83402470-83402489 None:intergenic 30.0%
CCTCAACAAAATAAGATTTC+AGG + Chr7:83400976-83400995 None:intergenic 30.0%
CTCCTCATAATAATGATGAT+TGG - Chr7:83401548-83401567 MsG0780040854.01.T01:intron 30.0%
GATAATTGGGATAATGATGA+TGG - Chr7:83399141-83399160 MsG0780040854.01.T01:three_prime_UTR 30.0%
GCATTGAAATTCCATATGAA+TGG + Chr7:83401117-83401136 None:intergenic 30.0%
GCTAAATTTACTAGAACCAA+CGG + Chr7:83400773-83400792 None:intergenic 30.0%
GGTATGTAAATGATATCCAT+GGG + Chr7:83401789-83401808 None:intergenic 30.0%
TAAGATTTCAGGAAGCTAAA+TGG + Chr7:83400965-83400984 None:intergenic 30.0%
TAATATTCTTGAATCAGGGT+TGG - Chr7:83402444-83402463 MsG0780040854.01.T01:CDS 30.0%
TATTAATGAGCTTCAGTTCA+GGG + Chr7:83399899-83399918 None:intergenic 30.0%
TCAATCAAGAGAATAAAAGC+TGG - Chr7:83401398-83401417 MsG0780040854.01.T01:intron 30.0%
TTAAAACTAAACTGTCCTGA+TGG + Chr7:83401843-83401862 None:intergenic 30.0%
TTAACTATGACTGAAAAGCA+AGG - Chr7:83400517-83400536 MsG0780040854.01.T01:intron 30.0%
TTATGTTAGCATCTTGAGAA+AGG - Chr7:83400377-83400396 MsG0780040854.01.T01:CDS 30.0%
TTATTAATGAGCTTCAGTTC+AGG + Chr7:83399900-83399919 None:intergenic 30.0%
TTGTTACGGAAAAATCAAAC+TGG - Chr7:83402286-83402305 MsG0780040854.01.T01:CDS 30.0%
! AAATTAGAGCTTTTAGGCAT+AGG - Chr7:83401052-83401071 MsG0780040854.01.T01:intron 30.0%
! AAGTCTTTTGGCAATCTTAT+TGG - Chr7:83400289-83400308 MsG0780040854.01.T01:CDS 30.0%
! AATTCTCAAACTCTTTAAGG+TGG - Chr7:83400257-83400276 MsG0780040854.01.T01:CDS 30.0%
! ATATGATTTGTCTGCTAATC+TGG - Chr7:83400700-83400719 MsG0780040854.01.T01:intron 30.0%
! GTATAATTCAAATGCTGCTT+CGG - Chr7:83398981-83399000 MsG0780040854.01.T01:three_prime_UTR 30.0%
! TTGCCCAATTTTACTATTAC+CGG - Chr7:83402795-83402814 MsG0780040854.01.T01:CDS 30.0%
! TTTTCGTGTTTTATGGGAAA+TGG - Chr7:83399530-83399549 MsG0780040854.01.T01:intron 30.0%
! TTTTTCTATGTCGTCTTCTT+TGG - Chr7:83402344-83402363 MsG0780040854.01.T01:intron 30.0%
!! AATGATGATGGTGATAGTTA+TGG - Chr7:83399153-83399172 MsG0780040854.01.T01:three_prime_UTR 30.0%
!! ACTTTTCTTATTTGTCCATC+AGG - Chr7:83401825-83401844 MsG0780040854.01.T01:intron 30.0%
!! TTTCTTGATTTTGAGGATAG+AGG - Chr7:83400172-83400191 MsG0780040854.01.T01:CDS 30.0%
!!! ACGTTATTTTTGTTCAGAGA+TGG - Chr7:83401022-83401041 MsG0780040854.01.T01:intron 30.0%
!!! CCTGAAATCTTATTTTGTTG+AGG - Chr7:83400973-83400992 MsG0780040854.01.T01:intron 30.0%
!!! TGGATTTTTTGCAAGTCTTT+TGG - Chr7:83400277-83400296 MsG0780040854.01.T01:CDS 30.0%
!!! TGTTTTTGCTGTTAATGTTG+AGG - Chr7:83400010-83400029 MsG0780040854.01.T01:CDS 30.0%
AAAGGATAAAAGGTGACAAC+TGG + Chr7:83400494-83400513 None:intergenic 35.0%
AAAGTTGGGTACTAAATGAG+AGG + Chr7:83402405-83402424 None:intergenic 35.0%
AACACGTTCCTTTCTCAATA+CGG - Chr7:83398928-83398947 MsG0780040854.01.T01:three_prime_UTR 35.0%
AACCAAACTCAAGATTACCA+GGG + Chr7:83399805-83399824 None:intergenic 35.0%
ACACGATTTAGCAGAAAGTT+GGG + Chr7:83402419-83402438 None:intergenic 35.0%
ACAGACAGATAATCATTCTG+AGG + Chr7:83399454-83399473 None:intergenic 35.0%
ACGTCCGGTAATAGTAAAAT+TGG + Chr7:83402802-83402821 None:intergenic 35.0%
AGATTTGACCGAATGGAAAT+TGG - Chr7:83400850-83400869 MsG0780040854.01.T01:CDS 35.0%
AGTTATCAGAATTCCCATTC+GGG + Chr7:83401348-83401367 None:intergenic 35.0%
ATAAAAGGTGACAACTGGAA+AGG + Chr7:83400489-83400508 None:intergenic 35.0%
ATAATGTTTCATCACACGTC+CGG + Chr7:83402817-83402836 None:intergenic 35.0%
ATACCTATCACTCAAACTCT+TGG - Chr7:83401473-83401492 MsG0780040854.01.T01:intron 35.0%
ATCAATTCTTCCTGCACATA+TGG + Chr7:83402622-83402641 None:intergenic 35.0%
ATGGTAATTATGTGCGTTGT+TGG - Chr7:83400912-83400931 MsG0780040854.01.T01:CDS 35.0%
CAAAACTATAGTTGACAGTC+TGG + Chr7:83402576-83402595 None:intergenic 35.0%
CAGTTATCAGAATTCCCATT+CGG + Chr7:83401349-83401368 None:intergenic 35.0%
CATAATAATGATGATTGGGC+TGG - Chr7:83401553-83401572 MsG0780040854.01.T01:intron 35.0%
CGTCCGGTAATAGTAAAATT+GGG + Chr7:83402801-83402820 None:intergenic 35.0%
CTCAAAGTCCAATTTCCATT+CGG + Chr7:83400861-83400880 None:intergenic 35.0%
GATGGTGATAGTTATGGTTA+TGG - Chr7:83399159-83399178 MsG0780040854.01.T01:three_prime_UTR 35.0%
GCCCAATCATCATTATTATG+AGG + Chr7:83401553-83401572 None:intergenic 35.0%
GGTGATGTAATTGGATTTGT+TGG - Chr7:83399222-83399241 MsG0780040854.01.T01:intron 35.0%
TAATCTTGAGTTTGGTTGGT+AGG - Chr7:83399808-83399827 MsG0780040854.01.T01:intron 35.0%
TACATTAGGGAAGGAAGAAT+GGG + Chr7:83402689-83402708 None:intergenic 35.0%
TACCTATCACTCAAACTCTT+GGG - Chr7:83401474-83401493 MsG0780040854.01.T01:intron 35.0%
TAGAGATTCCGTATTGAGAA+AGG + Chr7:83398939-83398958 None:intergenic 35.0%
TATTTATACGAGGACACAGT+TGG - Chr7:83399287-83399306 MsG0780040854.01.T01:intron 35.0%
TCTTGCGTTAATGAACTTCA+AGG + Chr7:83399956-83399975 None:intergenic 35.0%
TGTCCTCGTATAAATATCCT+CGG + Chr7:83399283-83399302 None:intergenic 35.0%
TTACATTAGGGAAGGAAGAA+TGG + Chr7:83402690-83402709 None:intergenic 35.0%
TTCTCAATACGGAATCTCTA+AGG - Chr7:83398939-83398958 MsG0780040854.01.T01:three_prime_UTR 35.0%
! AAAATCAATCGACCTGCTTT+TGG + Chr7:83402328-83402347 None:intergenic 35.0%
! ACTTTGAGGAATGTTGTGAT+TGG - Chr7:83400873-83400892 MsG0780040854.01.T01:CDS 35.0%
! AGCTTTTAGGCATAGGAATT+GGG - Chr7:83401059-83401078 MsG0780040854.01.T01:intron 35.0%
! CAGGAAGAATTGATTCTTTG+AGG - Chr7:83402628-83402647 MsG0780040854.01.T01:CDS 35.0%
! CATTTTCTTGATCTGGAGAT+CGG + Chr7:83398884-83398903 None:intergenic 35.0%
! CTTTGAGGAATGTTGTGATT+GGG - Chr7:83400874-83400893 MsG0780040854.01.T01:CDS 35.0%
!! AAATCAATCGACCTGCTTTT+GGG + Chr7:83402327-83402346 None:intergenic 35.0%
!! ATGAATCCATTGTAACGGAT+CGG + Chr7:83398858-83398877 None:intergenic 35.0%
!! GTAATTGGATTTGTTGGAAG+TGG - Chr7:83399228-83399247 MsG0780040854.01.T01:intron 35.0%
!! TTATCTGTCTGTTGTTTCTG+AGG - Chr7:83399462-83399481 MsG0780040854.01.T01:intron 35.0%
!! TTTTCCTTTCAGGTAAAGGA+CGG - Chr7:83401184-83401203 MsG0780040854.01.T01:intron 35.0%
!!! TTGTTTTGGGATCTTCTGTA+TGG - Chr7:83402726-83402745 MsG0780040854.01.T01:CDS 35.0%
AAAAACATGAGGAACCGATC+GGG + Chr7:83399997-83400016 None:intergenic 40.0%
AAAGGAACGTGTTGAGATTG+CGG + Chr7:83398921-83398940 None:intergenic 40.0%
AAGCTGCTCAACAGTTAAGA+TGG + Chr7:83400584-83400603 None:intergenic 40.0%
AATTCTTCCTGCACATATGG+AGG + Chr7:83402619-83402638 None:intergenic 40.0%
ACATTAGGGAAGGAAGAATG+GGG + Chr7:83402688-83402707 None:intergenic 40.0%
ACTCAAACTCTTGGGATGAT+TGG - Chr7:83401482-83401501 MsG0780040854.01.T01:intron 40.0%
ACTCAGAAGACATCAGAGAT+TGG - Chr7:83401247-83401266 MsG0780040854.01.T01:intron 40.0%
AGACATCAGAGATTGGACAA+AGG - Chr7:83401254-83401273 MsG0780040854.01.T01:intron 40.0%
AGAGATTGGACAAAGGACAT+GGG - Chr7:83401261-83401280 MsG0780040854.01.T01:intron 40.0%
AGGACATGGGGTATAATGAA+AGG - Chr7:83401274-83401293 MsG0780040854.01.T01:intron 40.0%
ATCAAGAAAATGGAAGCAGG+CGG - Chr7:83398892-83398911 MsG0780040854.01.T01:three_prime_UTR 40.0%
ATCCCAAGAGTTTGAGTGAT+AGG + Chr7:83401479-83401498 None:intergenic 40.0%
ATTAGGAGGAATCAGAGTAC+TGG - Chr7:83399201-83399220 MsG0780040854.01.T01:intron 40.0%
ATTCCCATTCGGGTAATCTT+TGG + Chr7:83401338-83401357 None:intergenic 40.0%
ATTGGGACAACCAAGATACA+AGG - Chr7:83401500-83401519 MsG0780040854.01.T01:intron 40.0%
CAAAAACATGAGGAACCGAT+CGG + Chr7:83399998-83400017 None:intergenic 40.0%
CAACCAAACTCAAGATTACC+AGG + Chr7:83399806-83399825 None:intergenic 40.0%
CAGATCAAGAAAATGGAAGC+AGG - Chr7:83398889-83398908 MsG0780040854.01.T01:three_prime_UTR 40.0%
CATAATTAGAGCCTTGCTTG+AGG - Chr7:83400795-83400814 MsG0780040854.01.T01:intron 40.0%
CGAATGGAAATTGGACTTTG+AGG - Chr7:83400859-83400878 MsG0780040854.01.T01:CDS 40.0%
CGAATGGGAATTCTGATAAC+TGG - Chr7:83401347-83401366 MsG0780040854.01.T01:intron 40.0%
CGATCTCCAGATCAAGAAAA+TGG - Chr7:83398882-83398901 MsG0780040854.01.T01:three_prime_UTR 40.0%
CTAGCATTCTCCTTAACAAC+AGG + Chr7:83399060-83399079 None:intergenic 40.0%
CTCAAACTCTTGGGATGATT+GGG - Chr7:83401483-83401502 MsG0780040854.01.T01:intron 40.0%
CTGGTAATCTTGAGTTTGGT+TGG - Chr7:83399804-83399823 MsG0780040854.01.T01:intron 40.0%
GACACGATTTAGCAGAAAGT+TGG + Chr7:83402420-83402439 None:intergenic 40.0%
GACATGGGGTATAATGAAAG+GGG - Chr7:83401276-83401295 MsG0780040854.01.T01:intron 40.0%
GGACATGGGGTATAATGAAA+GGG - Chr7:83401275-83401294 MsG0780040854.01.T01:intron 40.0%
GGACCATGAATCCATTGTAA+CGG + Chr7:83398863-83398882 None:intergenic 40.0%
GGGAATTGGTAAATTGTCCA+TGG - Chr7:83399597-83399616 MsG0780040854.01.T01:intron 40.0%
GTAAATGATATCCATGGGCA+CGG + Chr7:83401784-83401803 None:intergenic 40.0%
GTTCCGTTAGAGATTGAACT+CGG - Chr7:83399856-83399875 MsG0780040854.01.T01:intron 40.0%
GTTCTTCCTTCCTTGTATCT+TGG + Chr7:83401513-83401532 None:intergenic 40.0%
TACCCGAGTTCAATCTCTAA+CGG + Chr7:83399862-83399881 None:intergenic 40.0%
TACTAAAGAGATCACTGCCA+AGG - Chr7:83399633-83399652 MsG0780040854.01.T01:intron 40.0%
TAGAGGACAATGAGGAACAA+AGG - Chr7:83400189-83400208 MsG0780040854.01.T01:CDS 40.0%
TCACCAAAGATTACCCGAAT+GGG - Chr7:83401332-83401351 MsG0780040854.01.T01:intron 40.0%
TCTTCTACTTCTACCAGAGA+AGG - Chr7:83401424-83401443 MsG0780040854.01.T01:intron 40.0%
TGCTAATCTGGTCAATAGCT+GGG - Chr7:83400712-83400731 MsG0780040854.01.T01:intron 40.0%
TGCTCAACAGTTAAGATGGT+GGG + Chr7:83400580-83400599 None:intergenic 40.0%
TGGTGGTTGGGATGATAATT+GGG - Chr7:83399128-83399147 MsG0780040854.01.T01:three_prime_UTR 40.0%
TTCACCAAAGATTACCCGAA+TGG - Chr7:83401331-83401350 MsG0780040854.01.T01:intron 40.0%
TTCCGTTAGAGATTGAACTC+GGG - Chr7:83399857-83399876 MsG0780040854.01.T01:intron 40.0%
TTGGATTTGGATCTAGTCCT+GGG - Chr7:83399410-83399429 MsG0780040854.01.T01:intron 40.0%
TTTCAGGAAGCTAAATGGCA+AGG + Chr7:83400960-83400979 None:intergenic 40.0%
TTTGAGGATAGAGGACAATG+AGG - Chr7:83400181-83400200 MsG0780040854.01.T01:CDS 40.0%
! CTCAAGCAAGGCTCTAATTA+TGG + Chr7:83400797-83400816 None:intergenic 40.0%
! CTGCTTCCATTTTCTTGATC+TGG + Chr7:83398891-83398910 None:intergenic 40.0%
! GAGCTTTTAGGCATAGGAAT+TGG - Chr7:83401058-83401077 MsG0780040854.01.T01:intron 40.0%
! GATCCGTTACAATGGATTCA+TGG - Chr7:83398857-83398876 MsG0780040854.01.T01:three_prime_UTR 40.0%
! TAACATTTTGTCAAACGGGG+TGG - Chr7:83401740-83401759 MsG0780040854.01.T01:intron 40.0%
! TTTGGGATCTTCTGTATGGT+CGG - Chr7:83402730-83402749 MsG0780040854.01.T01:CDS 40.0%
!! ATAATGATGATTGGGCTGGT+TGG - Chr7:83401557-83401576 MsG0780040854.01.T01:intron 40.0%
!! ATGGAGGCTGATTTTACTAG+TGG + Chr7:83402603-83402622 None:intergenic 40.0%
!! CAGAGTACTGGTGATGTAAT+TGG - Chr7:83399213-83399232 MsG0780040854.01.T01:intron 40.0%
!! GTTAAGATGGTGGGAATTTG+TGG + Chr7:83400571-83400590 None:intergenic 40.0%
!! TAATGATGATTGGGCTGGTT+GGG - Chr7:83401558-83401577 MsG0780040854.01.T01:intron 40.0%
!! TGGGTGTTGGATTTGCTAAA+TGG - Chr7:83400893-83400912 MsG0780040854.01.T01:CDS 40.0%
!! TTAGTTTGTCCACCTGATGA+AGG + Chr7:83401454-83401473 None:intergenic 40.0%
!!! GGTTTTTTTCGCGAAGAAGA+TGG - Chr7:83399333-83399352 MsG0780040854.01.T01:intron 40.0%
!!! TTTTTTCGCGAAGAAGATGG+CGG - Chr7:83399336-83399355 MsG0780040854.01.T01:intron 40.0%
AAATCAGCCTCCATATGTGC+AGG - Chr7:83402609-83402628 MsG0780040854.01.T01:CDS 45.0%
AATCATACTATCCGTGCCCA+TGG - Chr7:83401770-83401789 MsG0780040854.01.T01:intron 45.0%
AGAGAAGGACAACCTTCATC+AGG - Chr7:83401439-83401458 MsG0780040854.01.T01:intron 45.0%
AGGAAGGAAGAACCAGCTAA+AGG - Chr7:83401520-83401539 MsG0780040854.01.T01:intron 45.0%
AGTAGCAGATTGAGCAACCA+TGG + Chr7:83399617-83399636 None:intergenic 45.0%
AGTTATGGTTATGGATCGCG+TGG - Chr7:83399168-83399187 MsG0780040854.01.T01:three_prime_UTR 45.0%
CAGAGATTGGACAAAGGACA+TGG - Chr7:83401260-83401279 MsG0780040854.01.T01:intron 45.0%
CGACCGAGGATATTTATACG+AGG - Chr7:83399277-83399296 MsG0780040854.01.T01:intron 45.0%
CGCAAGAGCAACACATGTTT+CGG - Chr7:83399969-83399988 MsG0780040854.01.T01:intron 45.0%
CGCTAGTCAATTGCTACTAC+AGG - Chr7:83402008-83402027 MsG0780040854.01.T01:intron 45.0%
CTAGTTTCATGCCCAAAAGC+AGG - Chr7:83402313-83402332 MsG0780040854.01.T01:CDS 45.0%
CTGCTAATCTGGTCAATAGC+TGG - Chr7:83400711-83400730 MsG0780040854.01.T01:intron 45.0%
CTGCTCAACAGTTAAGATGG+TGG + Chr7:83400581-83400600 None:intergenic 45.0%
GAGATTGGACAAAGGACATG+GGG - Chr7:83401262-83401281 MsG0780040854.01.T01:intron 45.0%
GCATTCTCCTTAACAACAGG+TGG + Chr7:83399057-83399076 None:intergenic 45.0%
GGAATGTTGTGATTGGGTGT+TGG - Chr7:83400880-83400899 MsG0780040854.01.T01:CDS 45.0%
GGACAACCAAGATACAAGGA+AGG - Chr7:83401504-83401523 MsG0780040854.01.T01:intron 45.0%
GGGTATAATGAAAGGGGTCA+TGG - Chr7:83401282-83401301 MsG0780040854.01.T01:intron 45.0%
GTGGTGGTTGGGATGATAAT+TGG - Chr7:83399127-83399146 MsG0780040854.01.T01:three_prime_UTR 45.0%
GTTGGATTTGGATCTAGTCC+TGG - Chr7:83399409-83399428 MsG0780040854.01.T01:intron 45.0%
TGAGGAGAAATCCTTTGAGC+AGG + Chr7:83399436-83399455 None:intergenic 45.0%
TGATGAAGGTTGTCCTTCTC+TGG + Chr7:83401440-83401459 None:intergenic 45.0%
TTATACGAGGACACAGTTGG+AGG - Chr7:83399290-83399309 MsG0780040854.01.T01:intron 45.0%
! AACTTTCAGAAGCATGCTGC+AGG + Chr7:83400404-83400423 None:intergenic 45.0%
! GAACTCCTCAACCTTTTGAG+AGG + Chr7:83401314-83401333 None:intergenic 45.0%
! GGTGGGAAGTATGTTGGATT+TGG - Chr7:83399397-83399416 MsG0780040854.01.T01:intron 45.0%
! TCTGGTCAATAGCTGGGTTT+TGG - Chr7:83400718-83400737 MsG0780040854.01.T01:intron 45.0%
! TTTGGTCATAATGGGACGTC+AGG - Chr7:83401622-83401641 MsG0780040854.01.T01:intron 45.0%
!! TATATATAATATGTAATTTA+GGG - Chr7:83402259-83402278 MsG0780040854.01.T01:CDS 5.0%
!! TTATATATAATATGTAATTT+AGG - Chr7:83402258-83402277 MsG0780040854.01.T01:CDS 5.0%
AATGAAAGGGGTCATGGCGT+TGG - Chr7:83401288-83401307 MsG0780040854.01.T01:intron 50.0%
ACAGGAGGAGGCTTTCACTA+AGG - Chr7:83401655-83401674 MsG0780040854.01.T01:intron 50.0%
ACCACCGTCCTTTACCTGAA+AGG + Chr7:83401191-83401210 None:intergenic 50.0%
AGCCTTGCTTGAGGTGAACT+AGG - Chr7:83400804-83400823 MsG0780040854.01.T01:intron 50.0%
CACATGTTTCGGATCCCGAT+CGG - Chr7:83399980-83399999 MsG0780040854.01.T01:intron 50.0%
CAGGAAGCTAAATGGCAAGG+CGG + Chr7:83400957-83400976 None:intergenic 50.0%
CTTCGTCCGATCCGTTACAA+TGG - Chr7:83398849-83398868 MsG0780040854.01.T01:three_prime_UTR 50.0%
GAAGGACAACCTTCATCAGG+TGG - Chr7:83401442-83401461 MsG0780040854.01.T01:intron 50.0%
GAGAATGCTAGTACTCGTGC+TGG - Chr7:83399069-83399088 MsG0780040854.01.T01:three_prime_UTR 50.0%
GCCTTGCTTGAGGTGAACTA+GGG - Chr7:83400805-83400824 MsG0780040854.01.T01:intron 50.0%
GCGTGATCCACCTGTTGTTA+AGG - Chr7:83399047-83399066 MsG0780040854.01.T01:three_prime_UTR 50.0%
GCTAGTACTCGTGCTGGAAA+AGG - Chr7:83399075-83399094 MsG0780040854.01.T01:three_prime_UTR 50.0%
GCTTCTGCTGCGAATAAGGA+AGG - Chr7:83399312-83399331 MsG0780040854.01.T01:intron 50.0%
GGACGGTGGTTATGATCACA+AGG - Chr7:83401201-83401220 MsG0780040854.01.T01:intron 50.0%
GGCCCTGGTAATCTTGAGTT+TGG - Chr7:83399800-83399819 MsG0780040854.01.T01:intron 50.0%
GGTGGCATACATGTCAAGCA+GGG - Chr7:83402525-83402544 MsG0780040854.01.T01:CDS 50.0%
TATGGTTATGGATCGCGTGG+TGG - Chr7:83399171-83399190 MsG0780040854.01.T01:three_prime_UTR 50.0%
TCCCTAGTTCACCTCAAGCA+AGG + Chr7:83400809-83400828 None:intergenic 50.0%
TGAACTCGGGTAATCCCGAT+CGG - Chr7:83399870-83399889 MsG0780040854.01.T01:intron 50.0%
TGAGGAGCTGATCCTTTAGC+TGG + Chr7:83401535-83401554 None:intergenic 50.0%
TGGAAAAGGAAAGCCACCTC+TGG - Chr7:83399089-83399108 MsG0780040854.01.T01:three_prime_UTR 50.0%
TGGTGGCATACATGTCAAGC+AGG - Chr7:83402524-83402543 MsG0780040854.01.T01:CDS 50.0%
TTCAGTTCAGGGCAACCGAT+CGG + Chr7:83399888-83399907 None:intergenic 50.0%
TTTGTCAAACGGGGTGGACA+CGG - Chr7:83401746-83401765 MsG0780040854.01.T01:intron 50.0%
! CATAATGGGACGTCAGGTTC+TGG - Chr7:83401628-83401647 MsG0780040854.01.T01:intron 50.0%
! CGCGAGAGCAACACATGTTT+TGG - Chr7:83399920-83399939 MsG0780040854.01.T01:intron 50.0%
! GTTGGCCTCTCAAAAGGTTG+AGG - Chr7:83401306-83401325 MsG0780040854.01.T01:intron 50.0%
! TCCTTTCAGGTAAAGGACGG+TGG - Chr7:83401187-83401206 MsG0780040854.01.T01:intron 50.0%
!! CATTGTAACGGATCGGACGA+AGG + Chr7:83398851-83398870 None:intergenic 50.0%
!! GTGGTGGTGGTGATATTAGG+AGG - Chr7:83399187-83399206 MsG0780040854.01.T01:intron 50.0%
!! TACGTCGAATGGTGGTGGTT+GGG - Chr7:83399116-83399135 MsG0780040854.01.T01:three_prime_UTR 50.0%
ACATACTTCCCACCCTGCGA+CGG + Chr7:83399391-83399410 None:intergenic 55.0%
CGATCGCATTCAAGCGATCG+CGG - Chr7:83399011-83399030 MsG0780040854.01.T01:three_prime_UTR 55.0%
CGATCGCTTGAATGCGATCG+CGG + Chr7:83399011-83399030 None:intergenic 55.0%
GAAATCCTTTGAGCAGGCCC+AGG + Chr7:83399430-83399449 None:intergenic 55.0%
GCATACATGTCAAGCAGGGC+TGG - Chr7:83402529-83402548 MsG0780040854.01.T01:CDS 55.0%
GGAGGCTTCTGCTGCGAATA+AGG - Chr7:83399308-83399327 MsG0780040854.01.T01:intron 55.0%
GGCGGAGAATGAATCGAGAC+CGG - Chr7:83399354-83399373 MsG0780040854.01.T01:intron 55.0%
GTGGAGTTACACCTTCGTCC+AGG - Chr7:83399247-83399266 MsG0780040854.01.T01:intron 55.0%
TCAGTTCAGGGCAACCGATC+GGG + Chr7:83399887-83399906 None:intergenic 55.0%
! ATCCTCGGTCGATTTCGACC+TGG + Chr7:83399268-83399287 None:intergenic 55.0%
! GTCGATTTCGACCTGGACGA+AGG + Chr7:83399261-83399280 None:intergenic 55.0%
! TCGCAGGGTGGGAAGTATGT+TGG - Chr7:83399391-83399410 MsG0780040854.01.T01:intron 55.0%
!! CATGGCGTTGGCCTCTCAAA+AGG - Chr7:83401300-83401319 MsG0780040854.01.T01:intron 55.0%
!! CGCGTGGTGGTGGTGATATT+AGG - Chr7:83399184-83399203 MsG0780040854.01.T01:three_prime_UTR 55.0%
!! CTACGTCGAATGGTGGTGGT+TGG - Chr7:83399115-83399134 MsG0780040854.01.T01:three_prime_UTR 55.0%
AGATGTGAACGCCGAGGCCA+CGG + Chr7:83398828-83398847 None:intergenic 60.0%
CCATTCGACGTAGCAGCCAG+AGG + Chr7:83399108-83399127 None:intergenic 60.0%
CCTCTGGCTGCTACGTCGAA+TGG - Chr7:83399105-83399124 MsG0780040854.01.T01:three_prime_UTR 60.0%
CGAAGGAGATGTGAACGCCG+AGG + Chr7:83398834-83398853 None:intergenic 60.0%
CGCATTCAAGCGATCGCGGA+AGG - Chr7:83399015-83399034 MsG0780040854.01.T01:three_prime_UTR 60.0%
CTAGTCCTGGGCCTGCTCAA+AGG - Chr7:83399422-83399441 MsG0780040854.01.T01:intron 60.0%
CTGGCTGCTACGTCGAATGG+TGG - Chr7:83399108-83399127 MsG0780040854.01.T01:three_prime_UTR 60.0%
GAATGCTCCGGCAAACACCG+TGG - Chr7:83398808-83398827 MsG0780040854.01.T01:three_prime_UTR 60.0%
GAGAGTCTTCCTCCGTCGCA+GGG - Chr7:83399376-83399395 MsG0780040854.01.T01:intron 60.0%
GCTGCTACGTCGAATGGTGG+TGG - Chr7:83399111-83399130 MsG0780040854.01.T01:three_prime_UTR 60.0%
GGTTATGGATCGCGTGGTGG+TGG - Chr7:83399174-83399193 MsG0780040854.01.T01:three_prime_UTR 60.0%
GTATACCCCCTCCAGACCCT+GGG - Chr7:83399772-83399791 MsG0780040854.01.T01:intron 60.0%
GTCCAGGTCGAAATCGACCG+AGG - Chr7:83399263-83399282 MsG0780040854.01.T01:intron 60.0%
TATACCCCCTCCAGACCCTG+GGG - Chr7:83399773-83399792 MsG0780040854.01.T01:intron 60.0%
TGCGACGGAGGAAGACTCTC+CGG + Chr7:83399376-83399395 None:intergenic 60.0%
TGTATACCCCCTCCAGACCC+TGG - Chr7:83399771-83399790 MsG0780040854.01.T01:intron 60.0%
TTCGACGTAGCAGCCAGAGG+TGG + Chr7:83399105-83399124 None:intergenic 60.0%
! ACGTCAGGTTCTGGCTGGAC+AGG - Chr7:83401637-83401656 MsG0780040854.01.T01:intron 60.0%
! ATGGGACGTCAGGTTCTGGC+TGG - Chr7:83401632-83401651 MsG0780040854.01.T01:intron 60.0%
! TCAGGTTCTGGCTGGACAGG+AGG - Chr7:83401640-83401659 MsG0780040854.01.T01:intron 60.0%
AGTCTTCCTCCGTCGCAGGG+TGG - Chr7:83399379-83399398 MsG0780040854.01.T01:intron 65.0%
ATTACCAGGGCCCCTTCCCC+AGG + Chr7:83399792-83399811 None:intergenic 65.0%
CGATCGCGGAAGGTCGTTCG+TGG - Chr7:83399025-83399044 MsG0780040854.01.T01:three_prime_UTR 65.0%
GGAGAGTCTTCCTCCGTCGC+AGG - Chr7:83399375-83399394 MsG0780040854.01.T01:intron 65.0%
GTCTTCCTCCGTCGCAGGGT+GGG - Chr7:83399380-83399399 MsG0780040854.01.T01:intron 65.0%
TACTTCCCACCCTGCGACGG+AGG + Chr7:83399388-83399407 None:intergenic 65.0%
TCCGGCAAACACCGTGGCCT+CGG - Chr7:83398814-83398833 MsG0780040854.01.T01:three_prime_UTR 65.0%
TTACCAGGGCCCCTTCCCCA+GGG + Chr7:83399791-83399810 None:intergenic 65.0%
! GGTTCTGGCTGGACAGGAGG+AGG - Chr7:83401643-83401662 MsG0780040854.01.T01:intron 65.0%
ACGGCAGCAGCAGCAGCAGC+AGG + Chr7:83400754-83400773 None:intergenic 70.0%
CCCCTCCAGACCCTGGGGAA+GGG - Chr7:83399778-83399797 MsG0780040854.01.T01:intron 70.0%
CCCCTTCCCCAGGGTCTGGA+GGG + Chr7:83399782-83399801 None:intergenic 70.0%
CCCTCCAGACCCTGGGGAAG+GGG - Chr7:83399779-83399798 MsG0780040854.01.T01:intron 70.0%
CCCTTCCCCAGGGTCTGGAG+GGG + Chr7:83399781-83399800 None:intergenic 70.0%
CCTTCCCCAGGGTCTGGAGG+GGG + Chr7:83399780-83399799 None:intergenic 70.0%
GCCGAGGCCACGGTGTTTGC+CGG + Chr7:83398818-83398837 None:intergenic 70.0%
GCTGCTGCTGCTGCTGCCGT+TGG - Chr7:83400754-83400773 MsG0780040854.01.T01:intron 70.0%
AGACCCTGGGGAAGGGGCCC+TGG - Chr7:83399785-83399804 MsG0780040854.01.T01:intron 75.0%
AGGGCCCCTTCCCCAGGGTC+TGG + Chr7:83399786-83399805 None:intergenic 75.0%
CCCCCTCCAGACCCTGGGGA+AGG - Chr7:83399777-83399796 MsG0780040854.01.T01:intron 75.0%
GCCCCTTCCCCAGGGTCTGG+AGG + Chr7:83399783-83399802 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 83398799 83402867 83398799 ID=MsG0780040854.01;Name=MsG0780040854.01
Chr7 mRNA 83398799 83402867 83398799 ID=MsG0780040854.01.T01;Parent=MsG0780040854.01;Name=MsG0780040854.01.T01;_AED=0.31;_eAED=0.35;_QI=0|0.4|0.5|1|0.8|0.66|6|408|415
Chr7 exon 83398799 83399205 83398799 ID=MsG0780040854.01.T01:exon:20234;Parent=MsG0780040854.01.T01
Chr7 exon 83399990 83400470 83399990 ID=MsG0780040854.01.T01:exon:20233;Parent=MsG0780040854.01.T01
Chr7 exon 83400850 83400936 83400850 ID=MsG0780040854.01.T01:exon:20232;Parent=MsG0780040854.01.T01
Chr7 exon 83402012 83402068 83402012 ID=MsG0780040854.01.T01:exon:20231;Parent=MsG0780040854.01.T01
Chr7 exon 83402183 83402336 83402183 ID=MsG0780040854.01.T01:exon:20230;Parent=MsG0780040854.01.T01
Chr7 exon 83402398 83402867 83402398 ID=MsG0780040854.01.T01:exon:20229;Parent=MsG0780040854.01.T01
Chr7 CDS 83402398 83402867 83402398 ID=MsG0780040854.01.T01:cds;Parent=MsG0780040854.01.T01
Chr7 CDS 83402183 83402336 83402183 ID=MsG0780040854.01.T01:cds;Parent=MsG0780040854.01.T01
Chr7 CDS 83402012 83402068 83402012 ID=MsG0780040854.01.T01:cds;Parent=MsG0780040854.01.T01
Chr7 CDS 83400850 83400936 83400850 ID=MsG0780040854.01.T01:cds;Parent=MsG0780040854.01.T01
Chr7 CDS 83399991 83400470 83399991 ID=MsG0780040854.01.T01:cds;Parent=MsG0780040854.01.T01
Chr7 three_prime_UTR 83399990 83399990 83399990 ID=MsG0780040854.01.T01:three_prime_utr;Parent=MsG0780040854.01.T01
Chr7 three_prime_UTR 83398799 83399205 83398799 ID=MsG0780040854.01.T01:three_prime_utr;Parent=MsG0780040854.01.T01
Gene Sequence

>MsG0780040854.01.T01

ATGTGTCTCGAATGCTCCGGCAAACACCGTGGCCTCGGCGTTCACATCTCCTTCGTCCGATCCGTTACAATGGATTCATGGTCCGATCTCCAGATCAAGAAAATGGAAGCAGGCGGTAACCGCAATCTCAACACGTTCCTTTCTCAATACGGAATCTCTAAGGAAACTGATATCATCACCAAGTATAATTCAAATGCTGCTTCGGTCTACCGCGATCGCATTCAAGCGATCGCGGAAGGTCGTTCGTGGCGTGATCCACCTGTTGTTAAGGAGAATGCTAGTACTCGTGCTGGAAAAGGAAAGCCACCTCTGGCTGCTACGTCGAATGGTGGTGGTTGGGATGATAATTGGGATAATGATGATGGTGATAGTTATGGTTATGGATCGCGTGGTGGTGGTGATATTAGGAGGAATCAGAGTACTGGTGATGTAATTGGATTTGTTGGAAGTGGAGTTACACCTTCGTCCAGGAAGGTTTTTTTCGCGAAGAAGATGGCGGAGAATGAATCGAGACCGGAGAGTCTTCCTCCGTCGCAGGGTGGGAAGTATGTTGGATTTGGATCTAGTCCTGGGCCTGCTCAAAGGATTTCTCCTCAGAATGATTATCTGTCTGTTGTTTCTGAGGGAATTGGTAAATTGTCCATGGTTGCTCAATCTGCTACTAAAGAGATCACTGCCAAGCTGGGTTTTGGCTATTTGATGCCTGCTGCTGCTGCTGCTGCCGTTGGTTCTAGTAAATTTAGCACCATAATTAGAGCCTTGCTTGAGGTAAAGGACGGTGGTTATGATCACAAGGTCAATGAAACTGTCAATATTGTCACTCAGAAGACATCAGAGATTGGACAAAGGACATGGGGTATAATGAAAGGGGTCATGGCGTTGGCCTCTCAAAAGGTTGAGGAGTTCACCAAAGATTACCCGAATGGGAATTCTGATAACTGGCCACAAAATGAAAATGATAGACATGATTTCAATCAAGAGAATAAAAGCTGGAATTCTTCTACTTCTACCAGAGAAGGACAACCTTCATCAGGTGGACAAACTAATACCTATCACTCAAACTCTTGGGATGATTGGGACAACCAAGATACAAGGAAGGAAGAACCAGCTAAAGGATCAGCTCCTCATAATAATGATGATTGGGCTGGTTGGGATGATGCCAAAGATGACGATGATGAATTTGATGATAAATCTTTTGGTCATAATGGGACGTCAGGTTCTGGCTGGACAGGAGGAGGCTTTCACTAA
Protein sequence

>MsG0780040854.01.T01

MCLECSGKHRGLGVHISFVRSVTMDSWSDLQIKKMEAGGNRNLNTFLSQYGISKETDIITKYNSNAASVYRDRIQAIAEGRSWRDPPVVKENASTRAGKGKPPLAATSNGGGWDDNWDNDDGDSYGYGSRGGGDIRRNQSTGDVIGFVGSGVTPSSRKVFFAKKMAENESRPESLPPSQGGKYVGFGSSPGPAQRISPQNDYLSVVSEGIGKLSMVAQSATKEITAKLGFGYLMPAAAAAAVGSSKFSTIIRALLEVKDGGYDHKVNETVNIVTQKTSEIGQRTWGIMKGVMALASQKVEEFTKDYPNGNSDNWPQNENDRHDFNQENKSWNSSTSTREGQPSSGGQTNTYHSNSWDDWDNQDTRKEEPAKGSAPHNNDDWAGWDDAKDDDDEFDDKSFGHNGTSGSGWTGGGFH*