Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041676.01.T02 | XP_013450572.1 | 95.69 | 116 | 4 | 1 | 1 | 115 | 55 | 170 | 1.03E-76 | 234 |
MsG0780041676.01.T01 | XP_013450572.1 | 97.059 | 170 | 4 | 1 | 1 | 169 | 1 | 170 | 5.67E-119 | 343 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041676.01.T01 | Q9FGH2 | 70.423 | 142 | 36 | 4 | 26 | 163 | 18 | 157 | 1.81E-66 | 203 |
MsG0780041676.01.T02 | Q9FGH2 | 68.75 | 112 | 30 | 3 | 2 | 109 | 47 | 157 | 1.34E-48 | 155 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041676.01.T01 | I3T2Z0 | 97.059 | 170 | 4 | 1 | 1 | 169 | 1 | 170 | 2.71e-119 | 343 |
MsG0780041676.01.T02 | I3T2Z0 | 95.690 | 116 | 4 | 1 | 1 | 115 | 55 | 170 | 4.92e-77 | 234 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048357.01 | MsG0780041676.01 | 0.822251 | 2.617473e-53 | 2.179160e-50 |
MsG0180000632.01 | MsG0780041676.01 | 0.834566 | 2.783084e-56 | 3.315634e-53 |
MsG0180001200.01 | MsG0780041676.01 | 0.820209 | 7.739466e-53 | 6.085222e-50 |
MsG0180001771.01 | MsG0780041676.01 | 0.842001 | 3.376198e-58 | 5.048883e-55 |
MsG0780040966.01 | MsG0780041676.01 | 0.824763 | 6.768063e-54 | 6.051782e-51 |
MsG0780041676.01 | MsG0880041858.01 | 0.842403 | 2.641286e-58 | 4.000817e-55 |
MsG0780041676.01 | MsG0880042958.01 | 0.808866 | 2.509370e-50 | 1.450950e-47 |
MsG0780041676.01 | MsG0880042959.01 | 0.800950 | 1.132927e-48 | 5.344409e-46 |
MsG0680031707.01 | MsG0780041676.01 | 0.855075 | 8.048211e-62 | 1.835712e-58 |
MsG0480018909.01 | MsG0780041676.01 | 0.800386 | 1.476659e-48 | 6.866814e-46 |
MsG0380016465.01 | MsG0780041676.01 | 0.805260 | 1.454638e-49 | 7.660286e-47 |
MsG0380017823.01 | MsG0780041676.01 | 0.813003 | 3.189203e-51 | 2.058227e-48 |
MsG0580029417.01 | MsG0780041676.01 | 0.839841 | 1.244583e-57 | 1.740159e-54 |
MsG0580029418.01 | MsG0780041676.01 | 0.847526 | 1.094056e-59 | 1.950273e-56 |
MsG0280007305.01 | MsG0780041676.01 | 0.826255 | 2.999203e-54 | 2.798071e-51 |
MsG0280007414.01 | MsG0780041676.01 | 0.823760 | 1.164308e-53 | 1.011798e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041676.01.T02 | MTR_7g115700 | 95.690 | 116 | 4 | 1 | 1 | 115 | 55 | 170 | 1.25e-80 | 234 |
MsG0780041676.01.T02 | MTR_5g072510 | 71.296 | 108 | 25 | 3 | 1 | 104 | 64 | 169 | 4.81e-50 | 158 |
MsG0780041676.01.T02 | MTR_2g016110 | 66.387 | 119 | 32 | 3 | 1 | 113 | 62 | 178 | 1.99e-47 | 150 |
MsG0780041676.01.T02 | MTR_1g442860 | 70.707 | 99 | 24 | 2 | 2 | 97 | 93 | 189 | 1.55e-46 | 149 |
MsG0780041676.01.T02 | MTR_4g094428 | 63.793 | 116 | 36 | 3 | 2 | 113 | 74 | 187 | 4.31e-46 | 149 |
MsG0780041676.01.T02 | MTR_2g092950 | 64.912 | 114 | 34 | 3 | 2 | 111 | 51 | 162 | 3.78e-45 | 144 |
MsG0780041676.01.T02 | MTR_4g079930 | 66.327 | 98 | 28 | 2 | 2 | 96 | 57 | 152 | 2.54e-44 | 142 |
MsG0780041676.01.T02 | MTR_2g076400 | 67.347 | 98 | 27 | 2 | 2 | 96 | 61 | 156 | 1.69e-43 | 140 |
MsG0780041676.01.T02 | MTR_1g080210 | 70.339 | 118 | 30 | 2 | 1 | 115 | 67 | 182 | 2.57e-43 | 140 |
MsG0780041676.01.T02 | MTR_7g097030 | 72.115 | 104 | 24 | 2 | 2 | 102 | 92 | 193 | 8.35e-42 | 137 |
MsG0780041676.01.T02 | MTR_1g069825 | 72.115 | 104 | 24 | 2 | 2 | 102 | 80 | 181 | 1.26e-41 | 137 |
MsG0780041676.01.T02 | MTR_1g075990 | 71.154 | 104 | 25 | 2 | 2 | 102 | 81 | 182 | 5.75e-41 | 134 |
MsG0780041676.01.T02 | MTR_3g031830 | 67.241 | 116 | 32 | 3 | 2 | 113 | 70 | 183 | 5.26e-40 | 132 |
MsG0780041676.01.T02 | MTR_8g086350 | 69.388 | 98 | 25 | 2 | 2 | 96 | 59 | 154 | 1.29e-34 | 118 |
MsG0780041676.01.T01 | MTR_7g115700 | 97.059 | 170 | 4 | 1 | 1 | 169 | 1 | 170 | 6.86e-123 | 343 |
MsG0780041676.01.T01 | MTR_5g072510 | 72.263 | 137 | 31 | 4 | 26 | 158 | 36 | 169 | 1.09e-67 | 205 |
MsG0780041676.01.T01 | MTR_1g442860 | 73.438 | 128 | 28 | 3 | 27 | 151 | 65 | 189 | 4.46e-64 | 196 |
MsG0780041676.01.T01 | MTR_4g094428 | 63.758 | 149 | 42 | 4 | 25 | 164 | 44 | 189 | 7.30e-64 | 196 |
MsG0780041676.01.T01 | MTR_2g016110 | 67.114 | 149 | 40 | 4 | 25 | 167 | 33 | 178 | 1.93e-63 | 193 |
MsG0780041676.01.T01 | MTR_1g080210 | 73.288 | 146 | 33 | 3 | 27 | 169 | 40 | 182 | 1.94e-62 | 191 |
MsG0780041676.01.T01 | MTR_2g092950 | 66.667 | 138 | 40 | 3 | 16 | 150 | 12 | 146 | 6.17e-62 | 189 |
MsG0780041676.01.T01 | MTR_2g076400 | 68.217 | 129 | 35 | 3 | 25 | 150 | 31 | 156 | 5.40e-60 | 184 |
MsG0780041676.01.T01 | MTR_1g075990 | 70.213 | 141 | 36 | 3 | 19 | 156 | 45 | 182 | 8.54e-60 | 184 |
MsG0780041676.01.T01 | MTR_4g079930 | 66.667 | 129 | 37 | 3 | 25 | 150 | 27 | 152 | 1.80e-59 | 183 |
MsG0780041676.01.T01 | MTR_7g097030 | 72.263 | 137 | 32 | 3 | 23 | 156 | 60 | 193 | 4.31e-59 | 183 |
MsG0780041676.01.T01 | MTR_1g069825 | 73.684 | 133 | 29 | 3 | 27 | 156 | 52 | 181 | 1.57e-58 | 182 |
MsG0780041676.01.T01 | MTR_3g031830 | 68.276 | 145 | 39 | 4 | 27 | 167 | 42 | 183 | 1.75e-56 | 177 |
MsG0780041676.01.T01 | MTR_8g086350 | 68.462 | 130 | 33 | 4 | 25 | 150 | 29 | 154 | 3.78e-48 | 154 |
MsG0780041676.01.T01 | MTR_1g114020 | 53.731 | 67 | 30 | 1 | 5 | 71 | 49 | 114 | 5.17e-17 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041676.01.T02 | AT5G58500 | 68.750 | 112 | 30 | 3 | 2 | 109 | 47 | 157 | 1.36e-49 | 155 |
MsG0780041676.01.T02 | AT1G07090 | 63.393 | 112 | 36 | 2 | 2 | 110 | 59 | 168 | 2.32e-47 | 150 |
MsG0780041676.01.T02 | AT2G42610 | 67.347 | 98 | 27 | 2 | 2 | 96 | 53 | 148 | 6.56e-44 | 141 |
MsG0780041676.01.T02 | AT2G42610 | 67.347 | 98 | 27 | 2 | 2 | 96 | 53 | 148 | 6.56e-44 | 141 |
MsG0780041676.01.T02 | AT5G28490 | 74.528 | 106 | 22 | 2 | 2 | 104 | 53 | 156 | 1.55e-43 | 140 |
MsG0780041676.01.T02 | AT4G18610 | 66.667 | 96 | 26 | 2 | 5 | 96 | 68 | 161 | 7.84e-43 | 139 |
MsG0780041676.01.T02 | AT3G04510 | 68.468 | 111 | 30 | 2 | 2 | 109 | 61 | 169 | 4.79e-42 | 137 |
MsG0780041676.01.T02 | AT2G31160 | 73.585 | 106 | 22 | 3 | 2 | 103 | 82 | 185 | 2.19e-40 | 134 |
MsG0780041676.01.T02 | AT1G16910 | 59.223 | 103 | 37 | 2 | 2 | 101 | 51 | 151 | 9.71e-39 | 127 |
MsG0780041676.01.T02 | AT3G23290 | 75.510 | 98 | 19 | 2 | 2 | 96 | 76 | 171 | 2.24e-38 | 128 |
MsG0780041676.01.T02 | AT1G78815 | 54.400 | 125 | 44 | 3 | 2 | 115 | 68 | 190 | 2.75e-37 | 125 |
MsG0780041676.01.T01 | AT5G58500 | 70.423 | 142 | 36 | 4 | 26 | 163 | 18 | 157 | 1.84e-67 | 203 |
MsG0780041676.01.T01 | AT1G07090 | 65.493 | 142 | 43 | 3 | 26 | 164 | 30 | 168 | 1.15e-64 | 197 |
MsG0780041676.01.T01 | AT5G28490 | 76.296 | 135 | 26 | 3 | 27 | 158 | 25 | 156 | 8.99e-62 | 189 |
MsG0780041676.01.T01 | AT3G04510 | 70.714 | 140 | 35 | 3 | 27 | 163 | 33 | 169 | 5.68e-60 | 185 |
MsG0780041676.01.T01 | AT2G42610 | 67.969 | 128 | 35 | 3 | 26 | 150 | 24 | 148 | 2.85e-59 | 182 |
MsG0780041676.01.T01 | AT2G42610 | 67.969 | 128 | 35 | 3 | 26 | 150 | 24 | 148 | 2.85e-59 | 182 |
MsG0780041676.01.T01 | AT2G31160 | 75.556 | 135 | 26 | 4 | 27 | 157 | 54 | 185 | 3.91e-58 | 181 |
MsG0780041676.01.T01 | AT4G18610 | 65.116 | 129 | 38 | 3 | 26 | 150 | 36 | 161 | 2.19e-57 | 178 |
MsG0780041676.01.T01 | AT3G23290 | 75.573 | 131 | 26 | 3 | 23 | 150 | 44 | 171 | 2.73e-57 | 178 |
MsG0780041676.01.T01 | AT1G78815 | 63.566 | 129 | 41 | 3 | 25 | 150 | 38 | 163 | 3.66e-55 | 172 |
MsG0780041676.01.T01 | AT1G16910 | 58.955 | 134 | 49 | 3 | 25 | 155 | 21 | 151 | 3.35e-52 | 164 |
Find 49 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCACTACCTTGATCAATT+TGG | 0.137888 | 7:+93796931 | MsG0780041676.01.T01:CDS |
TGTTCCAATCTCTCCTCTTT+TGG | 0.205312 | 7:-93796828 | None:intergenic |
AATCCAACTTGTCCTTTCTT+TGG | 0.215866 | 7:+93796970 | MsG0780041676.01.T01:CDS |
ATCCAACTTGTCCTTTCTTT+GGG | 0.324334 | 7:+93796971 | MsG0780041676.01.T01:CDS |
TTCACTACCTTGATCAATTT+GGG | 0.326576 | 7:+93796932 | MsG0780041676.01.T01:CDS |
GTCGATGGTTTCTTAAATAC+TGG | 0.330003 | 7:-93796858 | None:intergenic |
CATGGTGGAAGTAACCCTTT+TGG | 0.395005 | 7:+93797096 | MsG0780041676.01.T01:CDS |
GCACATGGAGATGGAGGGTT+TGG | 0.411549 | 7:-93796997 | None:intergenic |
AGAGCCAAAAGAGGAGAGAT+TGG | 0.437889 | 7:+93796824 | MsG0780041676.01.T01:CDS |
CACTTCCATTGTAGCTGCTA+GGG | 0.441671 | 7:-93796768 | None:intergenic |
TTGTCCTCTCCGTCAGGCGT+GGG | 0.455000 | 7:+93797020 | MsG0780041676.01.T01:CDS |
ATGTGCTTGTCCTCTCCGTC+AGG | 0.459665 | 7:+93797014 | MsG0780041676.01.T01:CDS |
TGATCAATTTGGGAAGACTA+AGG | 0.465045 | 7:+93796942 | MsG0780041676.01.T01:CDS |
CTAACAGCACCGTCACCAAA+AGG | 0.465453 | 7:-93797111 | None:intergenic |
GTGGTGGCAACAAGATCAAC+AGG | 0.470799 | 7:+93796797 | MsG0780041676.01.T01:CDS |
CTTGTCCTCTCCGTCAGGCG+TGG | 0.483822 | 7:+93797019 | MsG0780041676.01.T01:CDS |
GAGTTAGCTACCATAAGAAA+AGG | 0.502671 | 7:+93797178 | MsG0780041676.01.T01:CDS |
TAGTCTTCCCAAATTGATCA+AGG | 0.503689 | 7:-93796939 | None:intergenic |
GCTTATGATCAAGAGATTCA+TGG | 0.527780 | 7:+93797078 | MsG0780041676.01.T01:CDS |
ATTGAAGCAGAAAGTGGTAC+TGG | 0.535622 | 7:-93796880 | None:intergenic |
GTAGTTGTGATGTTGCCGTT+AGG | 0.535701 | 7:-93797207 | None:intergenic |
TCACTTCCATTGTAGCTGCT+AGG | 0.535763 | 7:-93796769 | None:intergenic |
TTATACAAGAAATATGGCAT+TGG | 0.537262 | 7:+93796726 | None:intergenic |
CAAGGCTACCCCACGCCTGA+CGG | 0.545353 | 7:-93797029 | None:intergenic |
CTTTCTGCTTCAATGTGCAA+TGG | 0.545802 | 7:+93796889 | MsG0780041676.01.T01:CDS |
AGAGGACAAGCACATGGAGA+TGG | 0.557220 | 7:-93797006 | None:intergenic |
CAAATTGATCAAGGTAGTGA+AGG | 0.557585 | 7:-93796930 | None:intergenic |
GGGTTTGGCATCCCAAAGAA+AGG | 0.560750 | 7:-93796982 | None:intergenic |
ACAAACCCTAGCAGCTACAA+TGG | 0.562580 | 7:+93796763 | MsG0780041676.01.T01:CDS |
TTGCACATTGAAGCAGAAAG+TGG | 0.564133 | 7:-93796886 | None:intergenic |
GGTAGCCTTGATGCTCTCAT+CGG | 0.565716 | 7:+93797042 | MsG0780041676.01.T01:CDS |
TAACAGCACCGTCACCAAAA+GGG | 0.567030 | 7:-93797110 | None:intergenic |
CATGACAAATAGAAATCAAG+AGG | 0.576026 | 7:-93797241 | None:intergenic |
TGTCCTCTCCGTCAGGCGTG+GGG | 0.576278 | 7:+93797021 | MsG0780041676.01.T01:CDS |
GGACAAGCACATGGAGATGG+AGG | 0.578694 | 7:-93797003 | None:intergenic |
GCCTTGATGCTCTCATCGGT+CGG | 0.581742 | 7:+93797046 | MsG0780041676.01.T01:CDS |
ATCCCAAAGAAAGGACAAGT+TGG | 0.587746 | 7:-93796973 | None:intergenic |
CAGAAAGTGGTACTGGTCGA+TGG | 0.588396 | 7:-93796873 | None:intergenic |
CTACCCCACGCCTGACGGAG+AGG | 0.603590 | 7:-93797024 | None:intergenic |
ACAGGTACGAGAGCCAAAAG+AGG | 0.613687 | 7:+93796815 | MsG0780041676.01.T01:CDS |
TGACGGAGAGGACAAGCACA+TGG | 0.624357 | 7:-93797012 | None:intergenic |
AATGGAAGTGATTCAAGTGG+TGG | 0.625867 | 7:+93796781 | MsG0780041676.01.T01:CDS |
GCCGACCGATGAGAGCATCA+AGG | 0.637841 | 7:-93797047 | None:intergenic |
AAGAAAAGGAAGAGACCTAA+CGG | 0.638455 | 7:+93797192 | MsG0780041676.01.T01:CDS |
GACAAGCACATGGAGATGGA+GGG | 0.652537 | 7:-93797002 | None:intergenic |
TACAATGGAAGTGATTCAAG+TGG | 0.673612 | 7:+93796778 | MsG0780041676.01.T01:CDS |
TATGATCAAGAGATTCATGG+TGG | 0.715975 | 7:+93797081 | MsG0780041676.01.T01:CDS |
TCTCATCGGTCGGCTCCGCG+CGG | 0.722452 | 7:+93797056 | MsG0780041676.01.T01:CDS |
TCTCTTGATCATAAGCCGCG+CGG | 0.776146 | 7:-93797071 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CATGACAAATAGAAATCAAG+AGG | - | Chr7:93797244-93797263 | None:intergenic | 30.0% | |
TTCACTACCTTGATCAATTT+GGG | + | Chr7:93796932-93796951 | MsG0780041676.01.T01:CDS | 30.0% | |
AAGAAAAGGAAGAGACCTAA+CGG | + | Chr7:93797192-93797211 | MsG0780041676.01.T01:CDS | 35.0% | |
AATCCAACTTGTCCTTTCTT+TGG | + | Chr7:93796970-93796989 | MsG0780041676.01.T01:CDS | 35.0% | |
ATCCAACTTGTCCTTTCTTT+GGG | + | Chr7:93796971-93796990 | MsG0780041676.01.T01:CDS | 35.0% | |
CAAATTGATCAAGGTAGTGA+AGG | - | Chr7:93796933-93796952 | None:intergenic | 35.0% | |
CTTCACTACCTTGATCAATT+TGG | + | Chr7:93796931-93796950 | MsG0780041676.01.T01:CDS | 35.0% | |
GAGTTAGCTACCATAAGAAA+AGG | + | Chr7:93797178-93797197 | MsG0780041676.01.T01:CDS | 35.0% | |
GCTTATGATCAAGAGATTCA+TGG | + | Chr7:93797078-93797097 | MsG0780041676.01.T01:CDS | 35.0% | |
GTCGATGGTTTCTTAAATAC+TGG | - | Chr7:93796861-93796880 | None:intergenic | 35.0% | |
TACAATGGAAGTGATTCAAG+TGG | + | Chr7:93796778-93796797 | MsG0780041676.01.T01:CDS | 35.0% | |
TAGTCTTCCCAAATTGATCA+AGG | - | Chr7:93796942-93796961 | None:intergenic | 35.0% | |
TATGATCAAGAGATTCATGG+TGG | + | Chr7:93797081-93797100 | MsG0780041676.01.T01:CDS | 35.0% | |
TGATCAATTTGGGAAGACTA+AGG | + | Chr7:93796942-93796961 | MsG0780041676.01.T01:CDS | 35.0% | |
! | TAGGTCTCTTCCTTTTCTTA+TGG | - | Chr7:93797191-93797210 | None:intergenic | 35.0% |
! | TGTTCGTGATTTTCAGTCAA+AGG | + | Chr7:93797149-93797168 | MsG0780041676.01.T01:CDS | 35.0% |
AATGGAAGTGATTCAAGTGG+TGG | + | Chr7:93796781-93796800 | MsG0780041676.01.T01:CDS | 40.0% | |
ATCCCAAAGAAAGGACAAGT+TGG | - | Chr7:93796976-93796995 | None:intergenic | 40.0% | |
ATTGAAGCAGAAAGTGGTAC+TGG | - | Chr7:93796883-93796902 | None:intergenic | 40.0% | |
CTTTCTGCTTCAATGTGCAA+TGG | + | Chr7:93796889-93796908 | MsG0780041676.01.T01:CDS | 40.0% | |
TTGCACATTGAAGCAGAAAG+TGG | - | Chr7:93796889-93796908 | None:intergenic | 40.0% | |
! | GATTTTCAGTCAAAGGCTAG+AGG | + | Chr7:93797156-93797175 | MsG0780041676.01.T01:CDS | 40.0% |
! | TGTTCCAATCTCTCCTCTTT+TGG | - | Chr7:93796831-93796850 | None:intergenic | 40.0% |
ACAAACCCTAGCAGCTACAA+TGG | + | Chr7:93796763-93796782 | MsG0780041676.01.T01:CDS | 45.0% | |
AGAGCCAAAAGAGGAGAGAT+TGG | + | Chr7:93796824-93796843 | MsG0780041676.01.T01:CDS | 45.0% | |
CACTTCCATTGTAGCTGCTA+GGG | - | Chr7:93796771-93796790 | None:intergenic | 45.0% | |
GTAGTTGTGATGTTGCCGTT+AGG | - | Chr7:93797210-93797229 | None:intergenic | 45.0% | |
TAACAGCACCGTCACCAAAA+GGG | - | Chr7:93797113-93797132 | None:intergenic | 45.0% | |
TCACTTCCATTGTAGCTGCT+AGG | - | Chr7:93796772-93796791 | None:intergenic | 45.0% | |
! | GGAAGTAACCCTTTTGGTGA+CGG | + | Chr7:93797102-93797121 | MsG0780041676.01.T01:CDS | 45.0% |
!! | CATGGTGGAAGTAACCCTTT+TGG | + | Chr7:93797096-93797115 | MsG0780041676.01.T01:CDS | 45.0% |
ACAGGTACGAGAGCCAAAAG+AGG | + | Chr7:93796815-93796834 | MsG0780041676.01.T01:CDS | 50.0% | |
AGAGGACAAGCACATGGAGA+TGG | - | Chr7:93797009-93797028 | None:intergenic | 50.0% | |
CTAACAGCACCGTCACCAAA+AGG | - | Chr7:93797114-93797133 | None:intergenic | 50.0% | |
GACAAGCACATGGAGATGGA+GGG | - | Chr7:93797005-93797024 | None:intergenic | 50.0% | |
GGGTTTGGCATCCCAAAGAA+AGG | - | Chr7:93796985-93797004 | None:intergenic | 50.0% | |
GTGGTGGCAACAAGATCAAC+AGG | + | Chr7:93796797-93796816 | MsG0780041676.01.T01:CDS | 50.0% | |
TCTCTTGATCATAAGCCGCG+CGG | - | Chr7:93797074-93797093 | None:intergenic | 50.0% | |
! | GGTAGCCTTGATGCTCTCAT+CGG | + | Chr7:93797042-93797061 | MsG0780041676.01.T01:CDS | 50.0% |
!! | CAGAAAGTGGTACTGGTCGA+TGG | - | Chr7:93796876-93796895 | None:intergenic | 50.0% |
!!! | CTTTTGGTGACGGTGCTGTT+AGG | + | Chr7:93797112-93797131 | MsG0780041676.01.T01:CDS | 50.0% |
ATGTGCTTGTCCTCTCCGTC+AGG | + | Chr7:93797014-93797033 | MsG0780041676.01.T01:CDS | 55.0% | |
GCACATGGAGATGGAGGGTT+TGG | - | Chr7:93797000-93797019 | None:intergenic | 55.0% | |
GCCTTGATGCTCTCATCGGT+CGG | + | Chr7:93797046-93797065 | MsG0780041676.01.T01:CDS | 55.0% | |
GGACAAGCACATGGAGATGG+AGG | - | Chr7:93797006-93797025 | None:intergenic | 55.0% | |
TGACGGAGAGGACAAGCACA+TGG | - | Chr7:93797015-93797034 | None:intergenic | 55.0% | |
TTGTCCTCTCCGTCAGGCGT+GGG | + | Chr7:93797020-93797039 | MsG0780041676.01.T01:CDS | 60.0% | |
!! | GCCGACCGATGAGAGCATCA+AGG | - | Chr7:93797050-93797069 | None:intergenic | 60.0% |
CAAGGCTACCCCACGCCTGA+CGG | - | Chr7:93797032-93797051 | None:intergenic | 65.0% | |
CTTGTCCTCTCCGTCAGGCG+TGG | + | Chr7:93797019-93797038 | MsG0780041676.01.T01:CDS | 65.0% | |
TGTCCTCTCCGTCAGGCGTG+GGG | + | Chr7:93797021-93797040 | MsG0780041676.01.T01:CDS | 65.0% | |
CTACCCCACGCCTGACGGAG+AGG | - | Chr7:93797027-93797046 | None:intergenic | 70.0% | |
! | TCTCATCGGTCGGCTCCGCG+CGG | + | Chr7:93797056-93797075 | MsG0780041676.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 93796739 | 93797264 | 93796739 | ID=MsG0780041676.01;Name=MsG0780041676.01 |
Chr7 | mRNA | 93796739 | 93797248 | 93796739 | ID=MsG0780041676.01.T01;Parent=MsG0780041676.01;Name=MsG0780041676.01.T01;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|169 |
Chr7 | exon | 93796739 | 93797248 | 93796739 | ID=MsG0780041676.01.T01:exon:22272;Parent=MsG0780041676.01.T01 |
Chr7 | CDS | 93796739 | 93797248 | 93796739 | ID=MsG0780041676.01.T01:cds;Parent=MsG0780041676.01.T01 |
Chr7 | mRNA | 93796901 | 93797248 | 93796901 | ID=MsG0780041676.01.T02;Parent=MsG0780041676.01;Name=MsG0780041676.01.T02;_AED=0.33;_eAED=0.33;_QI=0|-1|0|1|-1|0|1|0|115 |
Chr7 | exon | 93796901 | 93797248 | 93796901 | ID=MsG0780041676.01.T02:exon:22273;Parent=MsG0780041676.01.T02 |
Chr7 | CDS | 93796901 | 93797248 | 93796901 | ID=MsG0780041676.01.T02:cds;Parent=MsG0780041676.01.T02 |
Chr7 | mRNA | 93797082 | 93797264 | 93797082 | ID=MsG0780041676.01.T03;Parent=MsG0780041676.01;Name=MsG0780041676.01.T03;_AED=0.41;_eAED=1.00;_QI=0|-1|0|1|-1|0|1|0|60 |
Chr7 | exon | 93797082 | 93797264 | 93797082 | ID=MsG0780041676.01.T03:exon:22274;Parent=MsG0780041676.01.T03 |
Chr7 | CDS | 93797082 | 93797264 | 93797082 | ID=MsG0780041676.01.T03:cds;Parent=MsG0780041676.01.T03 |
Gene Sequence |
Protein sequence |