AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018778.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018778.01.T01 MTR_5g066280 60.067 298 111 2 337 632 40 331 2.32e-115 348
MsG0480018778.01.T01 MTR_5g066280 68.528 197 56 4 1 195 41 233 1.04e-88 279
MsG0480018778.01.T01 MTR_5g066280 62.051 195 71 2 170 362 40 233 6.01e-76 246
MsG0480018778.01.T01 MTR_4g026120 59.732 298 112 2 337 632 40 331 1.12e-114 346
MsG0480018778.01.T01 MTR_4g026120 68.528 197 56 4 1 195 41 233 8.06e-89 279
MsG0480018778.01.T01 MTR_4g026120 62.051 195 71 2 170 362 40 233 5.70e-76 246
MsG0480018778.01.T01 MTR_4g036435 59.732 298 112 2 337 632 40 331 1.12e-114 346
MsG0480018778.01.T01 MTR_4g036435 68.528 197 56 4 1 195 41 233 8.06e-89 279
MsG0480018778.01.T01 MTR_4g036435 62.051 195 71 2 170 362 40 233 5.70e-76 246
MsG0480018778.01.T01 MTR_3g067785 59.732 298 112 2 337 632 40 331 1.22e-114 346
MsG0480018778.01.T01 MTR_3g067785 68.528 197 56 4 1 195 41 233 7.48e-89 280
MsG0480018778.01.T01 MTR_3g067785 62.051 195 71 2 170 362 40 233 6.14e-76 246
MsG0480018778.01.T01 MTR_2g022120 59.732 298 112 2 337 632 104 395 3.25e-114 347
MsG0480018778.01.T01 MTR_2g022120 67.500 200 59 4 1 198 105 300 4.95e-88 280
MsG0480018778.01.T01 MTR_2g022120 61.111 198 74 2 170 365 104 300 3.06e-75 246
MsG0480018778.01.T01 MTR_4g013220 59.732 298 112 2 337 632 40 331 3.91e-114 345
MsG0480018778.01.T01 MTR_4g013220 68.528 197 56 4 1 195 41 233 2.15e-88 278
MsG0480018778.01.T01 MTR_4g013220 62.051 195 71 2 170 362 40 233 1.73e-75 244
MsG0480018778.01.T01 MTR_1g106885 59.732 298 112 2 337 632 101 392 5.62e-114 347
MsG0480018778.01.T01 MTR_1g106885 67.500 200 59 4 1 198 102 297 8.20e-88 279
MsG0480018778.01.T01 MTR_1g106885 61.111 198 74 2 170 365 101 297 4.56e-75 246
MsG0480018778.01.T01 MTR_5g077245 59.396 298 113 2 337 632 93 384 5.43e-113 344
MsG0480018778.01.T01 MTR_5g077245 67.500 200 59 4 1 198 94 289 6.78e-88 279
MsG0480018778.01.T01 MTR_5g077245 61.111 198 74 2 170 365 93 289 4.47e-75 245
MsG0480018778.01.T01 MTR_6g092533 55.705 298 112 2 337 632 104 383 7.25e-104 320
MsG0480018778.01.T01 MTR_6g092533 67.021 188 57 3 1 186 105 289 5.31e-83 266
MsG0480018778.01.T01 MTR_6g092533 60.215 186 72 1 170 353 104 289 1.85e-70 233
MsG0480018778.01.T01 MTR_7g062380 61.390 259 92 2 363 619 1 253 2.74e-103 314
MsG0480018778.01.T01 MTR_7g062380 66.471 170 53 3 28 195 1 168 8.41e-73 235
MsG0480018778.01.T01 MTR_7g062380 64.497 169 57 2 196 362 1 168 3.45e-69 226
MsG0480018778.01.T01 MTR_6g453050 59.717 283 98 4 337 616 40 309 3.01e-102 314
MsG0480018778.01.T01 MTR_6g453050 66.337 202 59 4 1 196 41 239 1.10e-86 273
MsG0480018778.01.T01 MTR_6g453050 61.538 195 72 2 170 362 40 233 1.82e-75 244
MsG0480018778.01.T01 MTR_7g461350 60.403 298 96 4 336 619 71 360 6.40e-99 307
MsG0480018778.01.T01 MTR_7g461350 72.081 197 49 3 1 195 83 275 2.32e-85 272
MsG0480018778.01.T01 MTR_7g461350 71.176 170 44 3 195 362 109 275 1.39e-64 217
MsG0480018778.01.T01 MTR_6g016670 60.403 298 96 4 336 619 71 360 6.40e-99 307
MsG0480018778.01.T01 MTR_6g016670 72.081 197 49 3 1 195 83 275 2.32e-85 272
MsG0480018778.01.T01 MTR_6g016670 71.176 170 44 3 195 362 109 275 1.39e-64 217
MsG0480018778.01.T01 MTR_3g464310 60.403 298 96 4 336 619 71 360 6.40e-99 307
MsG0480018778.01.T01 MTR_3g464310 72.081 197 49 3 1 195 83 275 2.32e-85 272
MsG0480018778.01.T01 MTR_3g464310 71.176 170 44 3 195 362 109 275 1.39e-64 217
MsG0480018778.01.T01 MTR_2g072860 64.394 264 84 3 355 616 34 289 1.36e-97 301
MsG0480018778.01.T01 MTR_2g072860 71.574 197 50 3 1 195 15 207 4.41e-86 271
MsG0480018778.01.T01 MTR_2g072860 70.588 170 45 3 195 362 41 207 2.48e-65 217
MsG0480018778.01.T01 MTR_3g464170 59.661 295 97 4 336 616 71 357 1.28e-96 301
MsG0480018778.01.T01 MTR_3g464170 71.574 197 50 3 1 195 83 275 6.94e-85 271
MsG0480018778.01.T01 MTR_3g464170 70.588 170 45 3 195 362 109 275 4.14e-64 216
MsG0480018778.01.T01 MTR_1g100375 59.661 295 97 4 336 616 71 357 1.28e-96 301
MsG0480018778.01.T01 MTR_1g100375 71.574 197 50 3 1 195 83 275 6.94e-85 271
MsG0480018778.01.T01 MTR_1g100375 70.588 170 45 3 195 362 109 275 4.14e-64 216
MsG0480018778.01.T01 MTR_6g051405 64.394 264 84 3 355 616 102 357 1.77e-96 301
MsG0480018778.01.T01 MTR_6g051405 71.574 197 50 3 1 195 83 275 1.13e-84 270
MsG0480018778.01.T01 MTR_6g051405 70.588 170 45 3 195 362 109 275 4.01e-64 216
MsG0480018778.01.T01 MTR_3g450670 64.394 264 84 3 355 616 98 353 1.93e-96 300
MsG0480018778.01.T01 MTR_3g450670 68.528 197 56 3 1 195 79 271 1.22e-78 254
MsG0480018778.01.T01 MTR_3g450670 70.588 170 45 3 195 362 105 271 3.52e-64 216
MsG0480018778.01.T01 MTR_1g471070 64.394 264 84 3 355 616 98 353 1.93e-96 300
MsG0480018778.01.T01 MTR_1g471070 68.528 197 56 3 1 195 79 271 1.22e-78 254
MsG0480018778.01.T01 MTR_1g471070 70.588 170 45 3 195 362 105 271 3.52e-64 216
MsG0480018778.01.T01 MTR_7g083520 60.075 268 91 5 355 619 32 286 5.99e-87 273
MsG0480018778.01.T01 MTR_7g083520 67.188 192 58 3 1 190 15 203 1.26e-73 238
MsG0480018778.01.T01 MTR_7g083520 66.667 165 53 1 195 357 39 203 2.06e-62 209
MsG0480018778.01.T01 MTR_3g464850 55.914 279 83 5 355 630 16 257 1.40e-85 268
MsG0480018778.01.T01 MTR_3g464850 59.596 198 50 5 3 198 1 170 3.22e-60 202
MsG0480018778.01.T01 MTR_3g464850 57.803 173 46 3 195 365 23 170 1.99e-49 173
MsG0480018778.01.T01 MTR_1g075060 52.650 283 104 5 337 616 91 346 1.72e-82 264
MsG0480018778.01.T01 MTR_1g075060 58.000 200 64 5 1 198 92 273 4.38e-67 223
MsG0480018778.01.T01 MTR_1g075060 53.030 198 76 3 170 365 91 273 7.71e-58 199
MsG0480018778.01.T01 MTR_1g046830 53.285 274 82 5 355 626 58 287 5.24e-80 255
MsG0480018778.01.T01 MTR_1g046830 59.694 196 53 5 2 195 42 213 4.01e-61 205
MsG0480018778.01.T01 MTR_1g046830 52.308 195 70 3 170 362 40 213 5.29e-49 173
MsG0480018778.01.T01 MTR_0004s0260 56.631 279 81 5 355 630 119 360 2.34e-78 253
MsG0480018778.01.T01 MTR_0004s0260 60.000 200 50 5 1 198 102 273 3.56e-60 205
MsG0480018778.01.T01 MTR_0004s0260 50.230 217 63 6 152 365 99 273 4.67e-48 172
MsG0480018778.01.T01 MTR_4g046090 59.825 229 58 2 404 632 69 263 1.37e-77 248
MsG0480018778.01.T01 MTR_4g046090 71.429 126 35 1 70 195 69 193 5.56e-58 196
MsG0480018778.01.T01 MTR_4g046090 69.355 124 37 1 239 362 71 193 1.14e-52 182
MsG0480018778.01.T01 MTR_7g072210 53.846 286 97 5 337 619 101 354 7.16e-76 247
MsG0480018778.01.T01 MTR_7g072210 60.000 200 55 5 1 198 102 278 7.21e-61 207
MsG0480018778.01.T01 MTR_7g072210 48.848 217 71 6 152 365 99 278 4.20e-47 170
MsG0480018778.01.T01 MTR_1g086750 60.455 220 78 3 363 579 1 214 9.92e-74 236
MsG0480018778.01.T01 MTR_1g086750 67.683 164 50 2 28 189 1 163 3.41e-63 208
MsG0480018778.01.T01 MTR_1g086750 65.644 163 54 1 196 356 1 163 1.23e-61 204
MsG0480018778.01.T01 MTR_8g045460 50.174 287 72 5 348 632 169 386 1.17e-72 239
MsG0480018778.01.T01 MTR_8g045460 59.500 200 56 4 1 198 157 333 7.27e-67 224
MsG0480018778.01.T01 MTR_8g045460 53.476 187 63 3 181 365 169 333 9.88e-51 181
MsG0480018778.01.T01 MTR_6g065130 55.607 214 71 2 337 548 123 314 2.65e-64 214
MsG0480018778.01.T01 MTR_6g065130 55.330 197 61 4 1 195 124 295 7.14e-57 195
MsG0480018778.01.T01 MTR_6g065130 52.821 195 68 3 170 362 123 295 1.32e-51 181
MsG0480018778.01.T01 MTR_3g053390 80.142 141 28 0 492 632 1 141 4.42e-62 202
MsG0480018778.01.T01 MTR_6g069240 67.320 153 44 1 399 551 13 159 5.91e-56 188
MsG0480018778.01.T01 MTR_6g069240 72.222 126 35 0 65 190 13 138 4.68e-51 175
MsG0480018778.01.T01 MTR_6g069240 69.048 126 39 0 232 357 13 138 2.68e-46 162
MsG0480018778.01.T01 MTR_2g073530 63.704 135 46 2 1 133 15 148 6.60e-54 184
MsG0480018778.01.T01 MTR_2g073530 67.593 108 33 1 195 300 41 148 5.31e-44 157
MsG0480018778.01.T01 MTR_2g073530 65.179 112 37 1 358 467 37 148 1.69e-43 155
MsG0480018778.01.T01 MTR_2g073530 51.190 84 34 1 549 632 148 224 8.71e-17 80.5
MsG0480018778.01.T01 MTR_0021s0270 65.441 136 42 3 1 134 102 234 1.55e-53 183
MsG0480018778.01.T01 MTR_0021s0270 60.902 133 50 1 337 467 101 233 4.80e-48 168
MsG0480018778.01.T01 MTR_0021s0270 59.398 133 52 1 170 300 101 233 7.36e-47 165
MsG0480018778.01.T01 MTR_3g108270 58.025 162 44 4 1 160 83 222 3.80e-52 179
MsG0480018778.01.T01 MTR_3g108270 54.225 142 42 4 355 494 102 222 8.58e-38 140
MsG0480018778.01.T01 MTR_3g108270 55.556 135 37 4 195 327 109 222 5.48e-37 137
MsG0480018778.01.T01 MTR_1240s0010 60.428 187 61 2 446 632 1 174 5.76e-48 166
MsG0480018778.01.T01 MTR_1240s0010 71.429 84 23 1 112 195 1 83 2.40e-27 109
MsG0480018778.01.T01 MTR_1240s0010 65.476 84 28 1 279 362 1 83 1.68e-22 95.5
MsG0480018778.01.T01 MTR_1g048350 55.838 197 41 4 1 195 79 231 9.80e-45 161
MsG0480018778.01.T01 MTR_1g048350 54.500 200 48 2 355 552 96 254 1.53e-44 160
MsG0480018778.01.T01 MTR_1g048350 47.692 195 59 2 170 362 78 231 1.98e-31 124
MsG0480018778.01.T01 MTR_3g016340 52.703 148 42 3 1 148 22 141 3.64e-42 149
MsG0480018778.01.T01 MTR_3g016340 46.575 146 53 1 337 482 21 141 2.07e-34 128
MsG0480018778.01.T01 MTR_3g016340 45.890 146 54 1 170 315 21 141 5.43e-34 127
MsG0480018778.01.T01 MTR_3g110230 56.442 163 57 3 446 607 1 150 3.66e-39 142
MsG0480018778.01.T01 MTR_3g110230 71.429 84 23 1 112 195 1 83 1.27e-27 109
MsG0480018778.01.T01 MTR_3g110230 67.857 84 26 1 279 362 1 83 3.33e-23 97.1
MsG0480018778.01.T01 MTR_8g017060 65.094 106 32 2 1 104 83 185 7.46e-39 143
MsG0480018778.01.T01 MTR_8g017060 63.441 93 30 2 348 438 95 185 2.74e-30 119
MsG0480018778.01.T01 MTR_8g017060 72.152 79 18 2 195 271 109 185 3.93e-30 118
MsG0480018778.01.T01 MTR_2g014785 53.757 173 47 2 446 618 1 140 5.89e-37 135
MsG0480018778.01.T01 MTR_2g014785 50.538 93 20 1 112 204 1 67 1.73e-11 62.8
MsG0480018778.01.T01 MTR_0007s0250 60.294 136 48 3 502 632 30 164 2.15e-36 134
MsG0480018778.01.T01 MTR_0007s0250 77.419 62 9 2 1 58 14 74 9.49e-23 95.9
MsG0480018778.01.T01 MTR_3g074670 60.317 126 37 2 507 632 128 240 6.32e-35 132
MsG0480018778.01.T01 MTR_1g106935 57.600 125 47 1 508 632 1 119 2.69e-34 126
MsG0480018778.01.T01 MTR_3g093185 62.963 108 31 4 1 102 83 187 1.28e-31 125
MsG0480018778.01.T01 MTR_3g093185 59.420 138 50 1 479 616 161 292 9.76e-31 122
MsG0480018778.01.T01 MTR_3g093185 66.667 66 18 2 355 418 102 165 3.63e-18 86.3
MsG0480018778.01.T01 MTR_3g093185 69.492 59 14 2 195 251 109 165 1.22e-16 81.6
MsG0480018778.01.T01 MTR_3g068050 57.895 133 38 2 448 580 47 161 4.56e-30 120
MsG0480018778.01.T01 MTR_3g068050 73.770 61 16 0 114 174 47 107 2.29e-23 100
MsG0480018778.01.T01 MTR_3g068050 67.059 85 27 1 281 365 47 130 9.03e-19 87.4
MsG0480018778.01.T01 MTR_3g068050 68.750 48 14 1 1 48 1 47 4.81e-12 67.4
MsG0480018778.01.T01 MTR_6g079450 66.667 84 23 2 1 82 83 163 7.60e-28 110
MsG0480018778.01.T01 MTR_6g079450 64.062 64 19 2 355 416 102 163 4.63e-16 76.6
MsG0480018778.01.T01 MTR_6g079450 60.938 64 21 2 188 249 102 163 2.08e-14 71.6
MsG0480018778.01.T01 MTR_1g101850 40.107 187 49 4 446 632 1 124 9.04e-28 108
MsG0480018778.01.T01 MTR_8g065645 74.026 77 17 2 1 75 79 154 4.80e-27 107
MsG0480018778.01.T01 MTR_8g065645 64.062 64 21 1 348 409 91 154 3.04e-18 82.4
MsG0480018778.01.T01 MTR_8g065645 64.062 64 21 1 181 242 91 154 7.83e-18 81.3
MsG0480018778.01.T01 MTR_1454s0010 61.538 91 30 3 1 89 41 128 7.30e-27 106
MsG0480018778.01.T01 MTR_1454s0010 57.303 89 36 1 337 423 40 128 2.03e-24 99.4
MsG0480018778.01.T01 MTR_1454s0010 56.180 89 37 1 170 256 40 128 1.45e-23 97.1
MsG0480018778.01.T01 MTR_5g048890 75.758 66 14 1 363 426 1 66 1.18e-26 104
MsG0480018778.01.T01 MTR_5g048890 74.242 66 15 1 196 259 1 66 3.78e-26 103
MsG0480018778.01.T01 MTR_5g048890 70.149 67 17 2 28 92 1 66 1.21e-22 93.2
MsG0480018778.01.T01 MTR_3g053410 77.778 63 14 0 97 159 27 89 4.75e-26 103
MsG0480018778.01.T01 MTR_3g053410 76.190 63 15 0 264 326 27 89 6.11e-24 97.8
MsG0480018778.01.T01 MTR_3g053410 76.190 63 15 0 431 493 27 89 6.11e-24 97.8
MsG0480018778.01.T01 MTR_1g026240 55.556 99 38 1 520 618 133 225 5.07e-23 98.6
MsG0480018778.01.T01 MTR_1g026240 60.714 84 28 3 1 82 41 121 7.63e-22 95.1
MsG0480018778.01.T01 MTR_1g026240 52.439 82 37 1 337 416 40 121 3.85e-17 81.3
MsG0480018778.01.T01 MTR_1g026240 51.220 82 38 1 170 249 40 121 2.01e-16 79.3
MsG0480018778.01.T01 MTR_3g075000 64.865 74 21 2 11 82 13 83 9.85e-23 92.8
MsG0480018778.01.T01 MTR_3g075000 65.625 64 18 2 355 416 22 83 1.71e-17 78.2
MsG0480018778.01.T01 MTR_3g075000 71.930 57 12 2 195 249 29 83 2.10e-17 77.8
MsG0480018778.01.T01 MTR_1g047150 58.763 97 27 2 520 616 13 96 2.52e-21 89.4
MsG0480018778.01.T01 MTR_3g108260 60.465 86 27 1 531 616 18 96 3.90e-21 89.0
MsG0480018778.01.T01 MTR_1g047160 65.217 69 19 2 1 67 79 144 1.20e-19 86.3
MsG0480018778.01.T01 MTR_3g053400 81.633 49 8 1 1 49 51 98 1.43e-17 78.6
MsG0480018778.01.T01 MTR_2g073570 64.615 65 20 2 1 63 79 142 2.23e-17 79.7
MsG0480018778.01.T01 MTR_2g073570 47.368 76 26 2 336 397 67 142 9.73e-11 60.5
MsG0480018778.01.T01 MTR_7g088160 22.867 293 194 4 348 608 67 359 3.82e-16 81.3
MsG0480018778.01.T01 MTR_7g088160 26.257 179 122 3 1 176 61 232 5.01e-14 74.7
MsG0480018778.01.T01 MTR_7g088160 27.273 176 124 2 181 352 67 242 5.06e-14 74.7
MsG0480018778.01.T01 MTR_4g063670 28.111 217 137 8 3 213 7 210 5.96e-14 73.6
MsG0480018778.01.T01 MTR_4g063670 24.883 213 138 7 179 384 10 207 4.45e-12 68.2
MsG0480018778.01.T01 MTR_4g063670 26.012 173 112 5 360 525 24 187 2.05e-11 65.9
MsG0480018778.01.T01 MTR_7g009090 68.085 47 11 2 6 49 38 83 2.31e-11 60.8
MsG0480018778.01.T01 MTR_7g107340 25.194 258 172 5 384 629 80 328 6.40e-11 64.7
MsG0480018778.01.T01 MTR_3g108300 65.306 49 16 1 1 49 15 62 7.94e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018778.01.T01 AT2G10975 56.349 126 35 1 507 632 28 133 1.47e-32 122
MsG0480018778.01.T01 AT1G36675 37.748 151 48 2 2 152 29 133 9.42e-20 90.1
MsG0480018778.01.T01 AT1G36675 35.519 183 48 2 363 545 55 167 4.22e-16 79.3
MsG0480018778.01.T01 AT3G29645 52.475 101 41 1 532 632 45 138 2.67e-19 85.1
MsG0480018778.01.T01 AT3G47680 25.175 286 180 8 367 632 30 301 6.81e-17 82.4
MsG0480018778.01.T01 AT3G47680 30.769 143 95 3 200 339 30 171 1.79e-16 81.3
MsG0480018778.01.T01 AT3G47680 29.078 141 96 3 35 172 32 171 1.08e-14 75.9
MsG0480018778.01.T01 AT5G41220 26.257 179 127 2 182 355 183 361 1.28e-15 80.5
MsG0480018778.01.T01 AT5G41220 26.437 174 124 2 374 545 211 382 3.56e-14 76.3
MsG0480018778.01.T01 AT5G41220 27.152 151 108 1 40 188 211 361 9.27e-13 71.6
MsG0480018778.01.T01 AT5G41220 26.257 179 127 2 182 355 175 353 1.33e-15 80.5
MsG0480018778.01.T01 AT5G41220 26.437 174 124 2 374 545 203 374 3.26e-14 76.3
MsG0480018778.01.T01 AT5G41220 27.152 151 108 1 40 188 203 353 8.65e-13 71.6
MsG0480018778.01.T01 AT5G41220 26.257 179 127 2 182 355 233 411 1.41e-15 80.5
MsG0480018778.01.T01 AT5G41220 26.437 174 124 2 374 545 261 432 4.05e-14 75.9
MsG0480018778.01.T01 AT5G41220 27.152 151 108 1 40 188 261 411 1.04e-12 71.6
MsG0480018778.01.T01 AT5G41240 25.703 249 161 6 331 559 220 464 4.43e-15 79.0
MsG0480018778.01.T01 AT5G41240 28.758 153 105 2 207 355 261 413 1.87e-14 77.0
MsG0480018778.01.T01 AT5G41240 23.288 219 147 4 24 225 249 463 4.98e-12 69.3
MsG0480018778.01.T01 AT3G29637 71.111 45 12 1 15 59 11 54 2.01e-12 64.7

Find 139 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTATTTGTGTTGAAAATT+TGG 0.136057 4:-9667423 None:intergenic
CCCAATATGTTTCACCTATC+TGG 0.192428 4:-9668102 None:intergenic
CCCAATATGTTTCACCTATC+TGG 0.192428 4:-9668603 None:intergenic
GAATGGTCATTTCAATTTAA+TGG 0.237080 4:+9667826 MsG0480018778.01.T01:CDS
GAATGGTCATTTCAATTTAA+TGG 0.237080 4:+9668327 MsG0480018778.01.T01:CDS
GAATGGTCATTTCAATTTAA+TGG 0.237080 4:+9668828 MsG0480018778.01.T01:CDS
CGATTAGGAGTTGAATCTTC+TGG 0.243748 4:-9667989 None:intergenic
TGAACAAATTGCTGGGTAAA+TGG 0.249311 4:+9667708 MsG0480018778.01.T01:CDS
TGAACAAAATACTAGGTAAA+TGG 0.272958 4:+9668209 MsG0480018778.01.T01:CDS
TGAACAAAATACTAGGTAAA+TGG 0.272958 4:+9668710 MsG0480018778.01.T01:CDS
ACCAGATAGGTGAAACATAT+TGG 0.279969 4:+9668101 MsG0480018778.01.T01:CDS
ACCAGATAGGTGAAACATAT+TGG 0.279969 4:+9668602 MsG0480018778.01.T01:CDS
ATGGACCACTGAACAAAATT+TGG 0.283132 4:+9667526 MsG0480018778.01.T01:CDS
GGGCTGAATTCAAACAATTC+AGG 0.291989 4:+9669067 MsG0480018778.01.T01:CDS
GTTATTTGTGTTGAAAATTT+GGG 0.292679 4:-9667422 None:intergenic
GGAGTTGAATCTTCTGGATT+AGG 0.300656 4:-9667983 None:intergenic
ATTTGTTCATGTAATTATAA+TGG 0.301017 4:-9667694 None:intergenic
ACAAGAAAGGTGAAACATAT+TGG 0.301534 4:+9667600 MsG0480018778.01.T01:CDS
GTTGAAAATTTGGGAAATTC+AGG 0.306382 4:-9667413 None:intergenic
AATGGATTGGCGCTTATGAT+AGG 0.320015 4:+9668728 MsG0480018778.01.T01:CDS
CAAGAAAGGTGAAACATATT+GGG 0.321721 4:+9667601 MsG0480018778.01.T01:CDS
GGAGTTGAATCCTCTGGATT+TGG 0.327056 4:-9667482 None:intergenic
TTTGTCGGAGAATGATATTT+TGG 0.329004 4:+9668273 MsG0480018778.01.T01:CDS
TTTGTCGGAGAATGATATTT+TGG 0.329004 4:+9668774 MsG0480018778.01.T01:CDS
TCATGTAATTATAATGGTTT+CGG 0.336350 4:-9667688 None:intergenic
TCATGTAATTATAATGGTTT+CGG 0.336350 4:-9668189 None:intergenic
TCATGTAATTATAATGGTTT+CGG 0.336350 4:-9668690 None:intergenic
CCAGATAGGTGAAACATATT+GGG 0.337296 4:+9668102 MsG0480018778.01.T01:CDS
CCAGATAGGTGAAACATATT+GGG 0.337296 4:+9668603 MsG0480018778.01.T01:CDS
TTGGTCGGAGAATGATATTT+TGG 0.344348 4:+9667772 MsG0480018778.01.T01:CDS
GGAGTTGAATCCTCTGGATT+AGG 0.357775 4:-9668484 None:intergenic
AGTCAAGTGGGAGGAAATAC+TGG 0.358912 4:+9668889 MsG0480018778.01.T01:CDS
GAATCCTTTCTTTCATCAAT+TGG 0.375319 4:-9669143 None:intergenic
ATTAATTTCCAAACAGCTCT+TGG 0.380739 4:-9669251 None:intergenic
CGATTAGGAGTTGAATCCTC+TGG 0.381537 4:-9668490 None:intergenic
TAATTACATGAACAAATTGC+TGG 0.401810 4:+9667700 MsG0480018778.01.T01:CDS
CGACAAGGAGTTGAATCCTC+TGG 0.405935 4:-9667488 None:intergenic
ATGGACCACTGAACAAAATC+TGG 0.414423 4:+9668027 MsG0480018778.01.T01:CDS
ATGGACCACTGAACAAAATC+TGG 0.414423 4:+9668528 MsG0480018778.01.T01:CDS
TATCATAACGTGATTGATTA+CGG 0.421623 4:-9668366 None:intergenic
CTCCGTGATCAACCACGTTA+TGG 0.423789 4:+9667863 MsG0480018778.01.T01:CDS
TTTAATGCTTATATGCCAAT+GGG 0.424511 4:+9667362 None:intergenic
AGTCAAGTAGGAGGAAATAC+TGG 0.460289 4:+9668388 MsG0480018778.01.T01:CDS
GGCTGAATTCAAACAATTCA+GGG 0.466333 4:+9669068 MsG0480018778.01.T01:CDS
ATAACTCTTGGTGGCATGAC+AGG 0.466372 4:+9667440 MsG0480018778.01.T01:CDS
TATAGAACAAGCAGTGTTGT+TGG 0.467253 4:+9667572 MsG0480018778.01.T01:CDS
AGTCAAGTCGGAGGAAATCT+TGG 0.471301 4:+9667887 MsG0480018778.01.T01:CDS
ATTTCAATTTAATGGCAGAA+TGG 0.479632 4:+9667834 MsG0480018778.01.T01:CDS
ATTTCAATTTAATGGCAGAA+TGG 0.479632 4:+9668335 MsG0480018778.01.T01:CDS
ATTTCAATTTAATGGCAGAA+TGG 0.479632 4:+9668836 MsG0480018778.01.T01:CDS
GGAGAAAGAGCTTGAACGAT+TGG 0.484879 4:+9669089 MsG0480018778.01.T01:CDS
ATAGAACAAGCAGTGTTGTT+GGG 0.490900 4:+9667573 MsG0480018778.01.T01:CDS
TATAGAACAAGCAGTGTTGT+CGG 0.491352 4:+9668574 MsG0480018778.01.T01:CDS
TGGAGGTGGTGAACAACGAT+TGG 0.493556 4:+9669046 MsG0480018778.01.T01:CDS
TATAGAACAAACAGTGTTGT+CGG 0.494125 4:+9668073 MsG0480018778.01.T01:CDS
AGGATCTAGTGCTCGTCCAA+TGG 0.499595 4:+9668972 MsG0480018778.01.T01:CDS
GTCGGAGGAAATCTTGGCTC+AGG 0.499631 4:+9667893 MsG0480018778.01.T01:CDS
GTTTAATGCTTATATGCCAA+TGG 0.502255 4:+9667361 None:intergenic
TCAACACAAATAACTCTTGG+TGG 0.502709 4:+9667431 MsG0480018778.01.T01:CDS
AATTACATGAACAAAATACT+AGG 0.504080 4:+9668202 MsG0480018778.01.T01:CDS
AATTACATGAACAAAATACT+AGG 0.504080 4:+9668703 MsG0480018778.01.T01:CDS
ATAGAACAAGCAGTGTTGTC+GGG 0.505574 4:+9668575 MsG0480018778.01.T01:CDS
GGATCTAGTGCTCGTCCAAT+GGG 0.506630 4:+9668973 MsG0480018778.01.T01:CDS
CTAACCAATTGATGAAAGAA+AGG 0.506851 4:+9669139 MsG0480018778.01.T01:CDS
AAACAAGGAAGCTGCCTTGG+AGG 0.508303 4:+9669029 MsG0480018778.01.T01:CDS
GTAGGAGGAAATACTGGCTC+AGG 0.516788 4:+9668394 MsG0480018778.01.T01:CDS
GTGGGAGGAAATACTGGCTC+AGG 0.516788 4:+9668895 MsG0480018778.01.T01:CDS
ATAGAACAAACAGTGTTGTC+GGG 0.519854 4:+9668074 MsG0480018778.01.T01:CDS
TTATACGCAAGTGGGAAGAA+TGG 0.525786 4:+9668310 MsG0480018778.01.T01:CDS
TTAGCTACCTCCCTACCCAT+TGG 0.528959 4:-9668988 None:intergenic
AGTGATGCATGTGGCATGAC+AGG 0.530978 4:+9667944 MsG0480018778.01.T01:CDS
ATTGATGCATGTGGCATGAC+AGG 0.530978 4:+9668445 MsG0480018778.01.T01:CDS
AAGTTGGGCCAAGAGCTGTT+TGG 0.533622 4:+9669243 MsG0480018778.01.T01:CDS
TTATACGCAAGTGGGAAGAA+TGG 0.534139 4:+9667809 MsG0480018778.01.T01:CDS
TTATACGCAAGTGGGAAGAA+TGG 0.534139 4:+9668811 MsG0480018778.01.T01:CDS
AATTACATGAACAAATTGCT+GGG 0.535135 4:+9667701 MsG0480018778.01.T01:CDS
CCGAGGAGCATCTCGATGAC+CGG 0.535989 4:+9669202 MsG0480018778.01.T01:CDS
GATAGAGCTAAGCGTTTGCA+AGG 0.541025 4:+9667743 MsG0480018778.01.T01:CDS
ATCTGGTGCTACTTAGTGCA+TGG 0.541420 4:+9668545 MsG0480018778.01.T01:CDS
AAAATACTAGGTAAATGGAT+TGG 0.550639 4:+9668214 MsG0480018778.01.T01:CDS
AAAATACTAGGTAAATGGAT+TGG 0.550639 4:+9668715 MsG0480018778.01.T01:CDS
CGCAAGAATTATACGCAAGT+GGG 0.551099 4:+9668302 MsG0480018778.01.T01:CDS
CGCAGGAATTATACGCAAGT+GGG 0.553395 4:+9667801 MsG0480018778.01.T01:CDS
CGCAGGAATTATACGCAAGT+GGG 0.553395 4:+9668803 MsG0480018778.01.T01:CDS
ATGGATTGGCGCTTATGATA+GGG 0.557903 4:+9668729 MsG0480018778.01.T01:CDS
CCGGTCATCGAGATGCTCCT+CGG 0.559244 4:-9669202 None:intergenic
TCACGTTATGATAGTCAAGT+AGG 0.559271 4:+9668376 MsG0480018778.01.T01:CDS
CTAGTGCTCGTCCAATGGGT+AGG 0.560903 4:+9668977 MsG0480018778.01.T01:CDS
GCTAAGCGTTTGCAAGGAAG+CGG 0.560942 4:+9667749 MsG0480018778.01.T01:CDS
AATTCAGGTGCATCAACACT+TGG 0.561118 4:-9667398 None:intergenic
CAAGGAAGCTGCCTTGGAGG+TGG 0.567928 4:+9669032 MsG0480018778.01.T01:CDS
TTTGCAAGGAAGCGGTTGGT+CGG 0.573642 4:+9667757 MsG0480018778.01.T01:CDS
CCACGTTATGGTAGTCAAGT+CGG 0.576259 4:+9667875 MsG0480018778.01.T01:CDS
TACCATAACGTGGTTGATCA+CGG 0.578164 4:-9667865 None:intergenic
TAGTGCTCGTCCAATGGGTA+GGG 0.581268 4:+9668978 MsG0480018778.01.T01:CDS
GCGCAAGAATTATACGCAAG+TGG 0.581687 4:+9668301 MsG0480018778.01.T01:CDS
GCGCAGGAATTATACGCAAG+TGG 0.583983 4:+9667800 MsG0480018778.01.T01:CDS
GCGCAGGAATTATACGCAAG+TGG 0.583983 4:+9668802 MsG0480018778.01.T01:CDS
GGAGGTGGTGAACAACGATT+GGG 0.584923 4:+9669047 MsG0480018778.01.T01:CDS
TGCTCGTCCAATGGGTAGGG+AGG 0.587020 4:+9668981 MsG0480018778.01.T01:CDS
TCATTTGATCCTCCGCGCGA+TGG 0.590331 4:+9667656 MsG0480018778.01.T01:CDS
AGCGTTTGCAAGGAAGCGGT+TGG 0.592282 4:+9667753 MsG0480018778.01.T01:CDS
AATCTTGGCTCAGGAAGTAG+TGG 0.592824 4:+9667902 MsG0480018778.01.T01:CDS
ATCGTTGTTCACCACCTCCA+AGG 0.594606 4:-9669043 None:intergenic
ATCTGGTGCTACTTAGTGCG+TGG 0.596171 4:+9668044 MsG0480018778.01.T01:CDS
AATACTGGCTCAGGAAGTAG+TGG 0.598390 4:+9668403 MsG0480018778.01.T01:CDS
AATACTGGCTCAGGAAGTAG+TGG 0.598390 4:+9668904 MsG0480018778.01.T01:CDS
TTTGTTCAGTGGTCCATATG+GGG 0.599154 4:-9667520 None:intergenic
GCATGTGGCTCAAACTCTGT+AGG 0.606449 4:+9668952 MsG0480018778.01.T01:CDS
ACCACGTTATGATAGTCAAG+TGG 0.606461 4:+9668876 MsG0480018778.01.T01:CDS
ATTTGGTGCTACTTAGTGCG+TGG 0.610162 4:+9667543 MsG0480018778.01.T01:CDS
CGTTATGATAGTCAAGTAGG+AGG 0.617240 4:+9668379 MsG0480018778.01.T01:CDS
CCACGTTATGATAGTCAAGT+GGG 0.619349 4:+9668877 MsG0480018778.01.T01:CDS
CGGCATGCAACTCCATCGCG+CGG 0.635257 4:-9667668 None:intergenic
TTTGTTCAGTGGTCCATTTG+GGG 0.637464 4:-9668021 None:intergenic
TTTGTTCAGTGGTCCATTTG+GGG 0.637464 4:-9668522 None:intergenic
CATGCAACTCCATCGCGCGG+AGG 0.645373 4:-9667665 None:intergenic
GTTGTTGGGAGAAACAAGAA+AGG 0.645376 4:+9667587 MsG0480018778.01.T01:CDS
CAGATAGGTGAAACATATTG+GGG 0.647759 4:+9668103 MsG0480018778.01.T01:CDS
CAGATAGGTGAAACATATTG+GGG 0.647759 4:+9668604 MsG0480018778.01.T01:CDS
AAGAAAGGTGAAACATATTG+GGG 0.647841 4:+9667602 MsG0480018778.01.T01:CDS
CGGCATGCGACTTCATCGCG+CGG 0.649472 4:-9668169 None:intergenic
CGGCATGCGACTTCATCGCG+CGG 0.649472 4:-9668670 None:intergenic
GTATATAAAGCTAAGTTCCG+AGG 0.649819 4:+9669185 MsG0480018778.01.T01:CDS
GATAGTCTTGATGCAACATG+AGG 0.660438 4:+9669116 MsG0480018778.01.T01:CDS
CCCACTTGACTATCATAACG+TGG 0.662281 4:-9668877 None:intergenic
CATGCGACTTCATCGCGCGG+AGG 0.663728 4:-9668166 None:intergenic
CATGCGACTTCATCGCGCGG+AGG 0.663728 4:-9668667 None:intergenic
GTTGTCGGGAGAAACCAGAT+AGG 0.670237 4:+9668088 MsG0480018778.01.T01:CDS
GTTGTCGGGAGAAACCAGAT+AGG 0.670237 4:+9668589 MsG0480018778.01.T01:CDS
TGAAATCACTCCTAATCCAG+AGG 0.670732 4:+9668474 MsG0480018778.01.T01:CDS
TCTCACGAGATTGATGCATG+TGG 0.685188 4:+9668436 MsG0480018778.01.T01:CDS
AATCATCACTCCAAATCCAG+AGG 0.685517 4:+9667472 MsG0480018778.01.T01:CDS
CCGACTTGACTACCATAACG+TGG 0.699927 4:-9667875 None:intergenic
CGTTATGATAGTCAAGTGGG+AGG 0.704547 4:+9668880 MsG0480018778.01.T01:CDS
CGTTATGGTAGTCAAGTCGG+AGG 0.710013 4:+9667878 MsG0480018778.01.T01:CDS
TTAATGCTTATATGCCAATG+GGG 0.723910 4:+9667363 None:intergenic
TCTCACGAGAGTGATGCATG+TGG 0.734953 4:+9667935 MsG0480018778.01.T01:CDS
TCTCACGAGAGTGATGCATG+TGG 0.736206 4:+9668937 MsG0480018778.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGTTCATGTAATTATAA+TGG - Chr4:9667697-9667716 None:intergenic 15.0%
!!! TTTTGTTCATGTAATTATAA+TGG - Chr4:9668198-9668217 None:intergenic 15.0%
!! AATTACATGAACAAAATACT+AGG + Chr4:9668202-9668221 MsG0480018778.01.T01:CDS 20.0%
!! AGTTATTTGTGTTGAAAATT+TGG - Chr4:9667426-9667445 None:intergenic 20.0%
!! GTTATTTGTGTTGAAAATTT+GGG - Chr4:9667425-9667444 None:intergenic 20.0%
!! TCATGTAATTATAATGGTTT+CGG - Chr4:9667691-9667710 None:intergenic 20.0%
! AAAATACTAGGTAAATGGAT+TGG + Chr4:9668214-9668233 MsG0480018778.01.T01:CDS 25.0%
! AATTACATGAACAAATTGCT+GGG + Chr4:9667701-9667720 MsG0480018778.01.T01:CDS 25.0%
! ATTTCAATTTAATGGCAGAA+TGG + Chr4:9667834-9667853 MsG0480018778.01.T01:CDS 25.0%
! GAATGGTCATTTCAATTTAA+TGG + Chr4:9667826-9667845 MsG0480018778.01.T01:CDS 25.0%
! TAATTACATGAACAAATTGC+TGG + Chr4:9667700-9667719 MsG0480018778.01.T01:CDS 25.0%
! TATCATAACGTGATTGATTA+CGG - Chr4:9668369-9668388 None:intergenic 25.0%
! TGAACAAAATACTAGGTAAA+TGG + Chr4:9668209-9668228 MsG0480018778.01.T01:CDS 25.0%
!! TTTTCAACACAAATAACTCT+TGG + Chr4:9667428-9667447 MsG0480018778.01.T01:CDS 25.0%
AAAAAGCTGTTGGAAAAGTT+GGG + Chr4:9669228-9669247 MsG0480018778.01.T01:CDS 30.0%
AAAGGGTAAAACGAAAAACA+AGG + Chr4:9669014-9669033 MsG0480018778.01.T01:CDS 30.0%
AAGAAAGGTGAAACATATTG+GGG + Chr4:9667602-9667621 MsG0480018778.01.T01:CDS 30.0%
ACAAGAAAGGTGAAACATAT+TGG + Chr4:9667600-9667619 MsG0480018778.01.T01:CDS 30.0%
CAAGAAAGGTGAAACATATT+GGG + Chr4:9667601-9667620 MsG0480018778.01.T01:CDS 30.0%
CTAACCAATTGATGAAAGAA+AGG + Chr4:9669139-9669158 MsG0480018778.01.T01:CDS 30.0%
GAATCCTTTCTTTCATCAAT+TGG - Chr4:9669146-9669165 None:intergenic 30.0%
GTTGAAAATTTGGGAAATTC+AGG - Chr4:9667416-9667435 None:intergenic 30.0%
TATAGAACAAACAGTGTTGT+CGG + Chr4:9668073-9668092 MsG0480018778.01.T01:CDS 30.0%
! TTTGTCGGAGAATGATATTT+TGG + Chr4:9668273-9668292 MsG0480018778.01.T01:CDS 30.0%
ACCAGATAGGTGAAACATAT+TGG + Chr4:9668101-9668120 MsG0480018778.01.T01:CDS 35.0%
AGGGAGGTAGCTAAAAAAAA+GGG + Chr4:9668997-9669016 MsG0480018778.01.T01:CDS 35.0%
ATAGAACAAACAGTGTTGTC+GGG + Chr4:9668074-9668093 MsG0480018778.01.T01:CDS 35.0%
ATGGACCACTGAACAAAATT+TGG + Chr4:9667526-9667545 MsG0480018778.01.T01:CDS 35.0%
CAGATAGGTGAAACATATTG+GGG + Chr4:9668103-9668122 MsG0480018778.01.T01:CDS 35.0%
CCAGATAGGTGAAACATATT+GGG + Chr4:9668102-9668121 MsG0480018778.01.T01:CDS 35.0%
GAAAAAGCTGTTGGAAAAGT+TGG + Chr4:9669227-9669246 MsG0480018778.01.T01:CDS 35.0%
GGCTGAATTCAAACAATTCA+GGG + Chr4:9669068-9669087 MsG0480018778.01.T01:CDS 35.0%
GTATATAAAGCTAAGTTCCG+AGG + Chr4:9669185-9669204 MsG0480018778.01.T01:CDS 35.0%
TAGGGAGGTAGCTAAAAAAA+AGG + Chr4:9668996-9669015 MsG0480018778.01.T01:CDS 35.0%
TATAGAACAAGCAGTGTTGT+CGG + Chr4:9667572-9667591 MsG0480018778.01.T01:CDS 35.0%
TATAGAACAAGCAGTGTTGT+TGG + Chr4:9667572-9667591 MsG0480018778.01.T01:CDS 35.0%
TCAACACAAATAACTCTTGG+TGG + Chr4:9667431-9667450 MsG0480018778.01.T01:CDS 35.0%
TCACGTTATGATAGTCAAGT+AGG + Chr4:9668376-9668395 MsG0480018778.01.T01:CDS 35.0%
TGAACAAATTGCTGGGTAAA+TGG + Chr4:9667708-9667727 MsG0480018778.01.T01:CDS 35.0%
! ATAGAACAAGCAGTGTTGTT+GGG + Chr4:9667573-9667592 MsG0480018778.01.T01:CDS 35.0%
! ATTTTGTTCAGTGGTCCATA+TGG - Chr4:9667525-9667544 None:intergenic 35.0%
! ATTTTGTTCAGTGGTCCATT+TGG - Chr4:9668026-9668045 None:intergenic 35.0%
! GATAGAGCTAAGAGTTTTCA+AGG + Chr4:9668244-9668263 MsG0480018778.01.T01:CDS 35.0%
! TAGCACCAAATTTTGTTCAG+TGG - Chr4:9667534-9667553 None:intergenic 35.0%
! TTGGTCGGAGAATGATATTT+TGG + Chr4:9667772-9667791 MsG0480018778.01.T01:CDS 35.0%
! TTTTGTTCAGTGGTCCATAT+GGG - Chr4:9667524-9667543 None:intergenic 35.0%
! TTTTGTTCAGTGGTCCATTT+GGG - Chr4:9668025-9668044 None:intergenic 35.0%
!! TTTCCAACAGCTTTTTCTTC+CGG - Chr4:9669224-9669243 None:intergenic 35.0%
AATCATCACTCCAAATCCAG+AGG + Chr4:9667472-9667491 MsG0480018778.01.T01:CDS 40.0%
AATTCAGGTGCATCAACACT+TGG - Chr4:9667401-9667420 None:intergenic 40.0%
ACCACGTTATGATAGTCAAG+TGG + Chr4:9668876-9668895 MsG0480018778.01.T01:CDS 40.0%
AGTCAAGTAGGAGGAAATAC+TGG + Chr4:9668388-9668407 MsG0480018778.01.T01:CDS 40.0%
ATAGAACAAGCAGTGTTGTC+GGG + Chr4:9668575-9668594 MsG0480018778.01.T01:CDS 40.0%
ATCGCAAGAAAAACCCCAAA+TGG + Chr4:9668008-9668027 MsG0480018778.01.T01:CDS 40.0%
ATGGACCACTGAACAAAATC+TGG + Chr4:9668027-9668046 MsG0480018778.01.T01:CDS 40.0%
CCACGTTATGATAGTCAAGT+GGG + Chr4:9668877-9668896 MsG0480018778.01.T01:CDS 40.0%
CCCAATATGTTTCACCTATC+TGG - Chr4:9668105-9668124 None:intergenic 40.0%
CGATTAGGAGTTGAATCTTC+TGG - Chr4:9667992-9668011 None:intergenic 40.0%
CGCAAGAATTATACGCAAGT+GGG + Chr4:9668302-9668321 MsG0480018778.01.T01:CDS 40.0%
CGTTATGATAGTCAAGTAGG+AGG + Chr4:9668379-9668398 MsG0480018778.01.T01:CDS 40.0%
GGAGTTGAATCTTCTGGATT+AGG - Chr4:9667986-9668005 None:intergenic 40.0%
GGGCTGAATTCAAACAATTC+AGG + Chr4:9669067-9669086 MsG0480018778.01.T01:CDS 40.0%
GTTGTTGGGAGAAACAAGAA+AGG + Chr4:9667587-9667606 MsG0480018778.01.T01:CDS 40.0%
TACCATAACGTGGTTGATCA+CGG - Chr4:9667868-9667887 None:intergenic 40.0%
TGAAATCACTCCTAATCCAG+AGG + Chr4:9667973-9667992 MsG0480018778.01.T01:CDS 40.0%
TTATACGCAAGTGGGAAGAA+TGG + Chr4:9667809-9667828 MsG0480018778.01.T01:CDS 40.0%
TTTGTTCAGTGGTCCATATG+GGG - Chr4:9667523-9667542 None:intergenic 40.0%
TTTGTTCAGTGGTCCATTTG+GGG - Chr4:9668024-9668043 None:intergenic 40.0%
! GATAGGGCTAAGAGTTTTCA+AGG + Chr4:9668745-9668764 MsG0480018778.01.T01:CDS 40.0%
! GATAGTCTTGATGCAACATG+AGG + Chr4:9669116-9669135 MsG0480018778.01.T01:CDS 40.0%
! GGAACATTTTCATTCCCCAT+TGG - Chr4:9667380-9667399 None:intergenic 40.0%
! TAGCACCAGATTTTGTTCAG+TGG - Chr4:9668035-9668054 None:intergenic 40.0%
! TTGGGGTTTTTCTTGCGATT+AGG - Chr4:9668007-9668026 None:intergenic 40.0%
!! AATGGATTGGCGCTTATGAT+AGG + Chr4:9668227-9668246 MsG0480018778.01.T01:CDS 40.0%
!! ATGGATTGGCGCTTATGATA+GGG + Chr4:9668228-9668247 MsG0480018778.01.T01:CDS 40.0%
!! GCTAAGAGTTTTCAAGGAAG+CGG + Chr4:9668250-9668269 MsG0480018778.01.T01:CDS 40.0%
!! TTTTCAAGGAAGCGGTTTGT+CGG + Chr4:9668258-9668277 MsG0480018778.01.T01:CDS 40.0%
!!! TGATATTTTGGCAAAAGCGC+AGG + Chr4:9667784-9667803 MsG0480018778.01.T01:CDS 40.0%
AATCTTGGCTCAGGAAGTAG+TGG + Chr4:9667902-9667921 MsG0480018778.01.T01:CDS 45.0%
AGTCAAGTCGGAGGAAATCT+TGG + Chr4:9667887-9667906 MsG0480018778.01.T01:CDS 45.0%
AGTCAAGTGGGAGGAAATAC+TGG + Chr4:9668889-9668908 MsG0480018778.01.T01:CDS 45.0%
ATTGATGCATGTGGCATGAC+AGG + Chr4:9668445-9668464 MsG0480018778.01.T01:CDS 45.0%
CCACGTTATGGTAGTCAAGT+CGG + Chr4:9667875-9667894 MsG0480018778.01.T01:CDS 45.0%
CCCACTTGACTATCATAACG+TGG - Chr4:9668880-9668899 None:intergenic 45.0%
CGATTAGGAGTTGAATCCTC+TGG - Chr4:9668493-9668512 None:intergenic 45.0%
CGCAGGAATTATACGCAAGT+GGG + Chr4:9667801-9667820 MsG0480018778.01.T01:CDS 45.0%
CGTTATGATAGTCAAGTGGG+AGG + Chr4:9668880-9668899 MsG0480018778.01.T01:CDS 45.0%
GAAAAACAAGGAAGCTGCCT+TGG + Chr4:9669026-9669045 MsG0480018778.01.T01:CDS 45.0%
GATAGAGCTAAGCGTTTGCA+AGG + Chr4:9667743-9667762 MsG0480018778.01.T01:CDS 45.0%
GCGCAAGAATTATACGCAAG+TGG + Chr4:9668301-9668320 MsG0480018778.01.T01:CDS 45.0%
GGAGAAAGAGCTTGAACGAT+TGG + Chr4:9669089-9669108 MsG0480018778.01.T01:CDS 45.0%
GGAGTTGAATCCTCTGGATT+AGG - Chr4:9667485-9667504 None:intergenic 45.0%
GGAGTTGAATCCTCTGGATT+TGG - Chr4:9667485-9667504 None:intergenic 45.0%
GTCGCAAGAAAAACCCCATA+TGG + Chr4:9667507-9667526 MsG0480018778.01.T01:CDS 45.0%
TCTCACGAGATTGATGCATG+TGG + Chr4:9668436-9668455 MsG0480018778.01.T01:CDS 45.0%
TGACCGGAAGAAAAAGCTGT+TGG + Chr4:9669218-9669237 MsG0480018778.01.T01:CDS 45.0%
! ATAACTCTTGGTGGCATGAC+AGG + Chr4:9667440-9667459 MsG0480018778.01.T01:CDS 45.0%
! ATGGGGTTTTTCTTGCGACA+AGG - Chr4:9667506-9667525 None:intergenic 45.0%
!! AATACTGGCTCAGGAAGTAG+TGG + Chr4:9668403-9668422 MsG0480018778.01.T01:CDS 45.0%
!! ATCTGGTGCTACTTAGTGCA+TGG + Chr4:9668545-9668564 MsG0480018778.01.T01:CDS 45.0%
!! ATTTGGTGCTACTTAGTGCG+TGG + Chr4:9667543-9667562 MsG0480018778.01.T01:CDS 45.0%
AAACAAGGAAGCTGCCTTGG+AGG + Chr4:9669029-9669048 MsG0480018778.01.T01:CDS 50.0%
AAGTTGGGCCAAGAGCTGTT+TGG + Chr4:9669243-9669262 MsG0480018778.01.T01:CDS 50.0%
AGGATCTAGTGCTCGTCCAA+TGG + Chr4:9668972-9668991 MsG0480018778.01.T01:CDS 50.0%
AGTGATGCATGTGGCATGAC+AGG + Chr4:9667944-9667963 MsG0480018778.01.T01:CDS 50.0%
ATCGTTGTTCACCACCTCCA+AGG - Chr4:9669046-9669065 None:intergenic 50.0%
CGACAAGGAGTTGAATCCTC+TGG - Chr4:9667491-9667510 None:intergenic 50.0%
CGTTATGGTAGTCAAGTCGG+AGG + Chr4:9667878-9667897 MsG0480018778.01.T01:CDS 50.0%
CTCCGTGATCAACCACGTTA+TGG + Chr4:9667863-9667882 MsG0480018778.01.T01:CDS 50.0%
GCATGTGGCTCAAACTCTGT+AGG + Chr4:9668952-9668971 MsG0480018778.01.T01:CDS 50.0%
GCGCAGGAATTATACGCAAG+TGG + Chr4:9667800-9667819 MsG0480018778.01.T01:CDS 50.0%
GCTAAGCGTTTGCAAGGAAG+CGG + Chr4:9667749-9667768 MsG0480018778.01.T01:CDS 50.0%
GGAGGTGGTGAACAACGATT+GGG + Chr4:9669047-9669066 MsG0480018778.01.T01:CDS 50.0%
GGATCTAGTGCTCGTCCAAT+GGG + Chr4:9668973-9668992 MsG0480018778.01.T01:CDS 50.0%
GTTGTCGGGAGAAACCAGAT+AGG + Chr4:9668088-9668107 MsG0480018778.01.T01:CDS 50.0%
TAGTGCTCGTCCAATGGGTA+GGG + Chr4:9668978-9668997 MsG0480018778.01.T01:CDS 50.0%
TCTCACGAGAGTGATGCATG+TGG + Chr4:9667935-9667954 MsG0480018778.01.T01:CDS 50.0%
TGGAGGTGGTGAACAACGAT+TGG + Chr4:9669046-9669065 MsG0480018778.01.T01:CDS 50.0%
TTAGCTACCTCCCTACCCAT+TGG - Chr4:9668991-9669010 None:intergenic 50.0%
TTTGCAAGGAAGCGGTTGGT+CGG + Chr4:9667757-9667776 MsG0480018778.01.T01:CDS 50.0%
! CCGACTTGACTACCATAACG+TGG - Chr4:9667878-9667897 None:intergenic 50.0%
!! ATCTGGTGCTACTTAGTGCG+TGG + Chr4:9668044-9668063 MsG0480018778.01.T01:CDS 50.0%
!! GTAGGAGGAAATACTGGCTC+AGG + Chr4:9668394-9668413 MsG0480018778.01.T01:CDS 50.0%
AGCGTTTGCAAGGAAGCGGT+TGG + Chr4:9667753-9667772 MsG0480018778.01.T01:CDS 55.0%
CTAGTGCTCGTCCAATGGGT+AGG + Chr4:9668977-9668996 MsG0480018778.01.T01:CDS 55.0%
GTCGGAGGAAATCTTGGCTC+AGG + Chr4:9667893-9667912 MsG0480018778.01.T01:CDS 55.0%
TCATTTGATCCTCCGCGCGA+TGG + Chr4:9667656-9667675 MsG0480018778.01.T01:CDS 55.0%
!! GTGGGAGGAAATACTGGCTC+AGG + Chr4:9668895-9668914 MsG0480018778.01.T01:CDS 55.0%
CAAGGAAGCTGCCTTGGAGG+TGG + Chr4:9669032-9669051 MsG0480018778.01.T01:CDS 60.0%
CCGGTCATCGAGATGCTCCT+CGG - Chr4:9669205-9669224 None:intergenic 60.0%
TGCTCGTCCAATGGGTAGGG+AGG + Chr4:9668981-9669000 MsG0480018778.01.T01:CDS 60.0%
!! CCGAGGAGCATCTCGATGAC+CGG + Chr4:9669202-9669221 MsG0480018778.01.T01:CDS 60.0%
CATGCAACTCCATCGCGCGG+AGG - Chr4:9667668-9667687 None:intergenic 65.0%
CATGCGACTTCATCGCGCGG+AGG - Chr4:9668169-9668188 None:intergenic 65.0%
CGGCATGCAACTCCATCGCG+CGG - Chr4:9667671-9667690 None:intergenic 65.0%
CGGCATGCGACTTCATCGCG+CGG - Chr4:9668172-9668191 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 9667374 9669272 9667374 ID=MsG0480018778.01;Name=MsG0480018778.01
Chr4 mRNA 9667374 9669272 9667374 ID=MsG0480018778.01.T01;Parent=MsG0480018778.01;Name=MsG0480018778.01.T01;_AED=0.40;_eAED=0.40;_QI=0|-1|0|1|-1|1|1|0|632
Chr4 exon 9667374 9669272 9667374 ID=MsG0480018778.01.T01:exon:2734;Parent=MsG0480018778.01.T01
Chr4 CDS 9667374 9669272 9667374 ID=MsG0480018778.01.T01:cds;Parent=MsG0480018778.01.T01
Gene Sequence

>MsG0480018778.01.T01

ATGCCAATGGGGAATGAAAATGTTCCAAGTGTTGATGCACCTGAATTTCCCAAATTTTCAACACAAATAACTCTTGGTGGCATGACAGGTGCTAATGAAATCATCACTCCAAATCCAGAGGATTCAACTCCTTGTCGCAAGAAAAACCCCATATGGACCACTGAACAAAATTTGGTGCTACTTAGTGCGTGGATTAAATATAGAACAAGCAGTGTTGTTGGGAGAAACAAGAAAGGTGAAACATATTGGGGTAGAATTGCTCAGTATTGTAATGAGCATTGCTCATTTGATCCTCCGCGCGATGGAGTTGCATGCCGAAACCATTATAATTACATGAACAAATTGCTGGGTAAATGGATTGACGCTTATGATAGAGCTAAGCGTTTGCAAGGAAGCGGTTGGTCGGAGAATGATATTTTGGCAAAAGCGCAGGAATTATACGCAAGTGGGAAGAATGGTCATTTCAATTTAATGGCAGAATGGCACGCTCTCCGTGATCAACCACGTTATGGTAGTCAAGTCGGAGGAAATCTTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCACGAGAGTGATGCATGTGGCATGACAGGTGCTAATGAAATCACTCCTAATCCAGAAGATTCAACTCCTAATCGCAAGAAAAACCCCAAATGGACCACTGAACAAAATCTGGTGCTACTTAGTGCGTGGATTAAATATAGAACAAACAGTGTTGTCGGGAGAAACCAGATAGGTGAAACATATTGGGGTAGAATTGCTGAGTATTGTAATGAGAATTGCTCATTTGATCCTCCGCGCGATGAAGTCGCATGCCGAAACCATTATAATTACATGAACAAAATACTAGGTAAATGGATTGGCGCTTATGATAGAGCTAAGAGTTTTCAAGGAAGCGGTTTGTCGGAGAATGATATTTTGGCAAAAGCGCAAGAATTATACGCAAGTGGGAAGAATGGTCATTTCAATTTAATGGCAGAATGGCACGCTCTCCGTAATCAATCACGTTATGATAGTCAAGTAGGAGGAAATACTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCACGAGATTGATGCATGTGGCATGACAGGTGCTAATGAAATCACTCCTAATCCAGAGGATTCAACTCCTAATCGCAAGAAAAACCCCAAATGGACCACTGAACAAAATCTGGTGCTACTTAGTGCATGGATTAAATATAGAACAAGCAGTGTTGTCGGGAGAAACCAGATAGGTGAAACATATTGGGGTAGAATTGCTGAGTATTGTAATGAGAATTGCTCATTTGATCCTCCGCGCGATGAAGTCGCATGCCGAAACCATTATAATTACATGAACAAAATACTAGGTAAATGGATTGGCGCTTATGATAGGGCTAAGAGTTTTCAAGGAAGCGGTTTGTCGGAGAATGATATTTTGGCAAAAGCGCAGGAATTATACGCAAGTGGGAAGAATGGTCATTTCAATTTAATGGCAGAATGGCACGCTCTCTGTAATCAACCACGTTATGATAGTCAAGTGGGAGGAAATACTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCACGAGAGTGATGCATGTGGCTCAAACTCTGTAGGATCTAGTGCTCGTCCAATGGGTAGGGAGGTAGCTAAAAAAAAGGGTAAAACGAAAAACAAGGAAGCTGCCTTGGAGGTGGTGAACAACGATTGGGCTGAATTCAAACAATTCAGGGAGAAAGAGCTTGAACGATTGGACAAGATAGTCTTGATGCAACATGAGGCTAACCAATTGATGAAAGAAAGGATTCATGCTAAGAAAATGAAAATGTATATAAAGCTAAGTTCCGAGGAGCATCTCGATGACCGGAAGAAAAAGCTGTTGGAAAAGTTGGGCCAAGAGCTGTTTGGAAATTAA

Protein sequence

>MsG0480018778.01.T01

MPMGNENVPSVDAPEFPKFSTQITLGGMTGANEIITPNPEDSTPCRKKNPIWTTEQNLVLLSAWIKYRTSSVVGRNKKGETYWGRIAQYCNEHCSFDPPRDGVACRNHYNYMNKLLGKWIDAYDRAKRLQGSGWSENDILAKAQELYASGKNGHFNLMAEWHALRDQPRYGSQVGGNLGSGSSGSKRSHESDACGMTGANEITPNPEDSTPNRKKNPKWTTEQNLVLLSAWIKYRTNSVVGRNQIGETYWGRIAEYCNENCSFDPPRDEVACRNHYNYMNKILGKWIGAYDRAKSFQGSGLSENDILAKAQELYASGKNGHFNLMAEWHALRNQSRYDSQVGGNTGSGSSGSKRSHEIDACGMTGANEITPNPEDSTPNRKKNPKWTTEQNLVLLSAWIKYRTSSVVGRNQIGETYWGRIAEYCNENCSFDPPRDEVACRNHYNYMNKILGKWIGAYDRAKSFQGSGLSENDILAKAQELYASGKNGHFNLMAEWHALCNQPRYDSQVGGNTGSGSSGSKRSHESDACGSNSVGSSARPMGREVAKKKGKTKNKEAALEVVNNDWAEFKQFREKELERLDKIVLMQHEANQLMKERIHAKKMKMYIKLSSEEHLDDRKKKLLEKLGQELFGN*