Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047478.01.T01 | XP_003610125.1 | 98.583 | 635 | 9 | 0 | 1 | 635 | 1 | 635 | 0 | 1285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047478.01.T01 | G7JVG3 | 98.583 | 635 | 9 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1285 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000185.01 | MsG0880047478.01 | 0.814272 | 1.676719e-51 | 1.120009e-48 |
| MsG0880044803.01 | MsG0880047478.01 | 0.810088 | 1.371638e-50 | 8.192097e-48 |
| MsG0880045022.01 | MsG0880047478.01 | 0.874010 | 9.428186e-68 | 4.176789e-64 |
| MsG0880047293.01 | MsG0880047478.01 | 0.829468 | 5.061135e-55 | 5.184414e-52 |
| MsG0180003749.01 | MsG0880047478.01 | 0.817933 | 2.550153e-52 | 1.882531e-49 |
| MsG0180003928.01 | MsG0880047478.01 | 0.800162 | 1.640263e-48 | 7.583794e-46 |
| MsG0180003937.01 | MsG0880047478.01 | 0.809385 | 1.942402e-50 | 1.138864e-47 |
| MsG0180004126.01 | MsG0880047478.01 | 0.803984 | 2.684857e-49 | 1.368342e-46 |
| MsG0180005189.01 | MsG0880047478.01 | 0.834137 | 3.567235e-56 | 4.194761e-53 |
| MsG0780040542.01 | MsG0880047478.01 | 0.805054 | 1.606652e-49 | 8.416565e-47 |
| MsG0780040564.01 | MsG0880047478.01 | 0.879925 | 8.369129e-70 | 4.624007e-66 |
| MsG0780040854.01 | MsG0880047478.01 | 0.802778 | 4.773897e-49 | 2.358927e-46 |
| MsG0780040879.01 | MsG0880047478.01 | 0.801604 | 8.325271e-49 | 3.992320e-46 |
| MsG0780041439.01 | MsG0880047478.01 | 0.807128 | 5.879272e-50 | 3.248276e-47 |
| MsG0780041548.01 | MsG0880047478.01 | 0.855271 | 7.057254e-62 | 1.620231e-58 |
| MsG0880042845.01 | MsG0880047478.01 | 0.832900 | 7.258499e-56 | 8.225570e-53 |
| MsG0480018990.01 | MsG0880047478.01 | 0.838019 | 3.687603e-57 | 4.876876e-54 |
| MsG0480021241.01 | MsG0880047478.01 | 0.804613 | 1.986162e-49 | 1.028688e-46 |
| MsG0480023188.01 | MsG0880047478.01 | 0.810479 | 1.129148e-50 | 6.813806e-48 |
| MsG0480023620.01 | MsG0880047478.01 | 0.807717 | 4.409242e-50 | 2.473785e-47 |
| MsG0480023697.01 | MsG0880047478.01 | 0.818614 | 1.787809e-52 | 1.344687e-49 |
| MsG0480023944.01 | MsG0880047478.01 | 0.807376 | 5.209629e-50 | 2.897000e-47 |
| MsG0580025093.01 | MsG0880047478.01 | 0.817239 | 3.655034e-52 | 2.647304e-49 |
| MsG0380015495.01 | MsG0880047478.01 | 0.834553 | 2.804846e-56 | 3.340249e-53 |
| MsG0380015518.01 | MsG0880047478.01 | 0.816440 | 5.522943e-52 | 3.913510e-49 |
| MsG0380016386.01 | MsG0880047478.01 | 0.804905 | 1.725824e-49 | 9.007118e-47 |
| MsG0380016567.01 | MsG0880047478.01 | 0.840193 | 1.007899e-57 | 1.424855e-54 |
| MsG0380016865.01 | MsG0880047478.01 | 0.820730 | 5.876420e-53 | 4.687442e-50 |
| MsG0380016871.01 | MsG0880047478.01 | 0.897050 | 2.045875e-76 | 2.271616e-72 |
| MsG0380016872.01 | MsG0880047478.01 | 0.883971 | 2.854203e-71 | 1.849024e-67 |
| MsG0380017240.01 | MsG0880047478.01 | 0.807644 | 4.569625e-50 | 2.558819e-47 |
| MsG0380017430.01 | MsG0880047478.01 | 0.800035 | 1.740912e-48 | 8.023493e-46 |
| MsG0380017983.01 | MsG0880047478.01 | 0.819286 | 1.258119e-52 | 9.640107e-50 |
| MsG0380017997.01 | MsG0880047478.01 | 0.809880 | 1.520495e-50 | 9.032344e-48 |
| MsG0480018256.01 | MsG0880047478.01 | 0.818327 | 2.076851e-52 | 1.549844e-49 |
| MsG0280007419.01 | MsG0880047478.01 | 0.828522 | 8.577893e-55 | 8.547322e-52 |
| MsG0280007601.01 | MsG0880047478.01 | 0.803284 | 3.751393e-49 | 1.877659e-46 |
| MsG0280007761.01 | MsG0880047478.01 | 0.805324 | 1.410669e-49 | 7.441225e-47 |
| MsG0280008235.01 | MsG0880047478.01 | 0.840378 | 9.016746e-58 | 1.281992e-54 |
| MsG0280009241.01 | MsG0880047478.01 | 0.812414 | 4.291597e-51 | 2.727040e-48 |
| MsG0280009509.01 | MsG0880047478.01 | 0.805276 | 1.443404e-49 | 7.604419e-47 |
| MsG0280010263.01 | MsG0880047478.01 | 0.824879 | 6.354817e-54 | 5.701243e-51 |
| MsG0780037232.01 | MsG0880047478.01 | 0.815563 | 8.672664e-52 | 5.999863e-49 |
| MsG0780037301.01 | MsG0880047478.01 | 0.861430 | 1.032063e-63 | 2.919897e-60 |
| MsG0780040027.01 | MsG0880047478.01 | 0.828065 | 1.105683e-54 | 1.087161e-51 |
| MsG0780040136.01 | MsG0880047478.01 | 0.882930 | 6.891256e-71 | 4.279549e-67 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047478.01.T01 | MTR_4g128210 | 98.583 | 635 | 9 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047478.01.T01 | AT5G57460 | 70.320 | 657 | 162 | 7 | 1 | 635 | 1 | 646 | 0.0 | 933 |
Find 195 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCAAGACCTTGAGGTTT+TGG | 0.220657 | 8:+86926918 | None:intergenic |
| GCTTGCAAGGGTTGGATTTA+TGG | 0.225612 | 8:-86926745 | MsG0880047478.01.T01:CDS |
| ACCCTATTCAAAACAGCTTT+TGG | 0.236466 | 8:+86926351 | None:intergenic |
| GGGTGGTGCACTTGAGAATT+TGG | 0.254258 | 8:-86926841 | MsG0880047478.01.T01:CDS |
| GTCAATGGAGCAAGCAAATC+AGG | 0.275814 | 8:+86926429 | None:intergenic |
| AATTATGGTGGAGTTGAGTT+TGG | 0.277643 | 8:-86927038 | MsG0880047478.01.T01:CDS |
| TCGGCGGCGTAGGCGTCTTC+GGG | 0.279379 | 8:+86927827 | None:intergenic |
| TTCGGCGGCGTAGGCGTCTT+CGG | 0.287482 | 8:+86927826 | None:intergenic |
| GGATGGTTCTTCCAATGATT+TGG | 0.294820 | 8:-86927150 | MsG0880047478.01.T01:CDS |
| AAGCTCTTGAGGTTTGTTAA+TGG | 0.303944 | 8:+86927196 | None:intergenic |
| GGGTTGATAAAGAAATTAAA+TGG | 0.308442 | 8:-86926332 | MsG0880047478.01.T01:CDS |
| CTTGCAAGGGTTGGATTTAT+GGG | 0.311528 | 8:-86926744 | MsG0880047478.01.T01:CDS |
| AAGAAATTAGTGTAGAGTTC+AGG | 0.323061 | 8:-86926776 | MsG0880047478.01.T01:CDS |
| GAGGGATTTGAAGGGAATTA+TGG | 0.323930 | 8:-86927053 | MsG0880047478.01.T01:CDS |
| AGATCCGTGGTGCGGATAAT+TGG | 0.324547 | 8:-86927433 | MsG0880047478.01.T01:CDS |
| ATCGTTTATCGTTTAGTTAA+CGG | 0.327877 | 8:-86927734 | MsG0880047478.01.T01:CDS |
| GTGGGAACCACTCGCGGGTT+TGG | 0.337887 | 8:+86927933 | None:intergenic |
| TTCAATGATGCTTGGGGTGG+TGG | 0.340633 | 8:-86926978 | MsG0880047478.01.T01:CDS |
| ACAATGGGATGTTTCATGTT+AGG | 0.350201 | 8:-86926590 | MsG0880047478.01.T01:CDS |
| CTAAATTTCATAATCGGTAT+AGG | 0.357717 | 8:+86926549 | None:intergenic |
| CAATGATTTGGCTACAGCTT+TGG | 0.359152 | 8:-86927138 | MsG0880047478.01.T01:CDS |
| TGAAGGTTTCAATGATGCTT+GGG | 0.365026 | 8:-86926985 | MsG0880047478.01.T01:CDS |
| ATCCTTACTCTCAACCTTCC+AGG | 0.369883 | 8:+86926279 | None:intergenic |
| AATCTCTTCATTCTGTTCAC+TGG | 0.374724 | 8:+86927280 | None:intergenic |
| TTCAAAAGAGTTGGGTCAAC+TGG | 0.376136 | 8:+86926381 | None:intergenic |
| AGCAAACTAAATTTCATAAT+CGG | 0.380999 | 8:+86926543 | None:intergenic |
| ATTCCATTGAAGGGCTCTCC+TGG | 0.384573 | 8:-86926297 | MsG0880047478.01.T01:CDS |
| CATCTCAGGACCCTTCATTT+CGG | 0.384729 | 8:+86926809 | None:intergenic |
| AGCTGACACCTTTGCCTTTG+AGG | 0.386012 | 8:-86926515 | MsG0880047478.01.T01:CDS |
| GCTGACACCTTTGCCTTTGA+GGG | 0.404571 | 8:-86926514 | MsG0880047478.01.T01:CDS |
| TTGAAGGTTTCAATGATGCT+TGG | 0.405127 | 8:-86926986 | MsG0880047478.01.T01:CDS |
| GAAATACGCCGAGATCTATA+TGG | 0.411237 | 8:-86927570 | MsG0880047478.01.T01:CDS |
| GTTAACGGAATCTACGTACT+TGG | 0.411997 | 8:-86927719 | MsG0880047478.01.T01:CDS |
| CCCTCCCCAGCTGTTCCCTT+AGG | 0.415069 | 8:+86926861 | None:intergenic |
| CTCGATGCTTCGGAGTTTGT+GGG | 0.420118 | 8:-86926954 | MsG0880047478.01.T01:CDS |
| GGTGGCTAGCCTTGCTGCTC+CGG | 0.425862 | 8:-86927306 | MsG0880047478.01.T01:CDS |
| GGGTGGTGGACTCGATGCTT+CGG | 0.426803 | 8:-86926964 | MsG0880047478.01.T01:CDS |
| GGAGAAACCTTCAAAAGAGT+TGG | 0.428502 | 8:+86926372 | None:intergenic |
| ACTCGATGCTTCGGAGTTTG+TGG | 0.429531 | 8:-86926955 | MsG0880047478.01.T01:CDS |
| CTCCTGGAAGGTTGAGAGTA+AGG | 0.438582 | 8:-86926281 | MsG0880047478.01.T01:CDS |
| GAGCCCTTCAATGGAATCTC+TGG | 0.440083 | 8:+86926303 | None:intergenic |
| CGAATGCGCGGCGCGTGTGG+CGG | 0.443035 | 8:+86927879 | None:intergenic |
| GTTCCCTTAGGTGCAACATC+TGG | 0.443331 | 8:+86926873 | None:intergenic |
| CAAAGCTGTAGCCAAATCAT+TGG | 0.443484 | 8:+86927139 | None:intergenic |
| GGGATCGTCACCGATGGATT+CGG | 0.449077 | 8:+86927808 | None:intergenic |
| GAGAAACCTTCAAAAGAGTT+GGG | 0.449239 | 8:+86926373 | None:intergenic |
| GCGGGTTTGGAGAAGGATAT+CGG | 0.449934 | 8:+86927946 | None:intergenic |
| TATTTCCGACCGAGCTTCTC+CGG | 0.450781 | 8:+86927587 | None:intergenic |
| GGAGTTGAGCTCTTGCAGAC+AGG | 0.454082 | 8:-86926897 | MsG0880047478.01.T01:CDS |
| GATTCAACAGAAGCAGAAAC+AGG | 0.454390 | 8:-86927261 | MsG0880047478.01.T01:CDS |
| GGAATGGAACAAGCTTCAAT+TGG | 0.455650 | 8:-86927017 | MsG0880047478.01.T01:CDS |
| GTTGCACCTAAGGGAACAGC+TGG | 0.463294 | 8:-86926867 | MsG0880047478.01.T01:CDS |
| TCTGTCTTTCCCTCCGAAGC+AGG | 0.466435 | 8:+86926153 | None:intergenic |
| GAATTCTCATTCCGAGTTGA+GGG | 0.468202 | 8:-86926666 | MsG0880047478.01.T01:CDS |
| GATTGTGTTGCCTCCGGAGG+CGG | 0.470285 | 8:+86927092 | None:intergenic |
| GATGAAGAAATTGAGGTAGT+TGG | 0.470445 | 8:-86926231 | MsG0880047478.01.T01:CDS |
| TCTTCTTCGTTAGAATCTAC+TGG | 0.470717 | 8:+86926255 | None:intergenic |
| ATAAATGTGGAGGGATTTGA+AGG | 0.471262 | 8:-86927062 | MsG0880047478.01.T01:CDS |
| TGTGCCAGAGATTCCATTGA+AGG | 0.471503 | 8:-86926307 | MsG0880047478.01.T01:CDS |
| CGTTGTCCGGAGTTTCTATA+CGG | 0.473729 | 8:-86926176 | MsG0880047478.01.T01:CDS |
| AGGGCCAGATGTTGCACCTA+AGG | 0.477079 | 8:-86926877 | MsG0880047478.01.T01:CDS |
| GGTGAAGAAAACCGAAATGA+AGG | 0.478452 | 8:-86926820 | MsG0880047478.01.T01:CDS |
| AAAGGCAAAGGTGTCAGCTT+CGG | 0.478917 | 8:+86926519 | None:intergenic |
| GAAAGCGGAAAGAGCGCCGA+GGG | 0.479174 | 8:+86927901 | None:intergenic |
| GCACCAAAACCTCAAGGTCT+TGG | 0.479338 | 8:-86926921 | MsG0880047478.01.T01:CDS |
| TGTTACTACATTGCCGCCTC+CGG | 0.480740 | 8:-86927105 | MsG0880047478.01.T01:CDS |
| AGTTTCTATACGGCCTGCTT+CGG | 0.481532 | 8:-86926166 | MsG0880047478.01.T01:CDS |
| TTCCCACCTTCACGCGCCCT+CGG | 0.482205 | 8:-86927917 | MsG0880047478.01.T01:CDS |
| AACGATAAACGATGCGGTAA+CGG | 0.482907 | 8:+86927744 | None:intergenic |
| CTTCCAGGAGAGCCCTTCAA+TGG | 0.483886 | 8:+86926294 | None:intergenic |
| AGAAGATGATGAAGAAATTG+AGG | 0.484087 | 8:-86926238 | MsG0880047478.01.T01:CDS |
| TTCAGTTTCTTTATCACCAT+CGG | 0.484150 | 8:+86926686 | None:intergenic |
| AGAAATTAGTGTAGAGTTCA+GGG | 0.488801 | 8:-86926775 | MsG0880047478.01.T01:CDS |
| GCTCTTGATATTGTCCTTCG+TGG | 0.489607 | 8:-86927548 | MsG0880047478.01.T01:CDS |
| GAGAAGGATATCGGATCCAT+TGG | 0.490736 | 8:+86927955 | None:intergenic |
| TTCTATACGGCCTGCTTCGG+AGG | 0.490922 | 8:-86926163 | MsG0880047478.01.T01:CDS |
| TCATTCTGTTCACTGGTCAC+CGG | 0.494373 | 8:+86927287 | None:intergenic |
| CTGCGAATGCGCGGCGCGTG+TGG | 0.495834 | 8:+86927876 | None:intergenic |
| ATGGCATCACTAGCTGCAAA+TGG | 0.499705 | 8:+86927215 | None:intergenic |
| TGCGAGATTTGAATTGCCTC+AGG | 0.504918 | 8:-86927354 | MsG0880047478.01.T01:CDS |
| TGAATTCTCATTCCGAGTTG+AGG | 0.507305 | 8:-86926667 | MsG0880047478.01.T01:CDS |
| CAAACAACTGAGACGTTGTC+CGG | 0.509867 | 8:-86926189 | MsG0880047478.01.T01:CDS |
| GCGCCGAGGGCGCGTGAAGG+TGG | 0.511025 | 8:+86927914 | None:intergenic |
| CAAATGCATCGATGCTCGCT+TGG | 0.511922 | 8:+86927381 | None:intergenic |
| TCAGGGAATCACTGCTTGCA+AGG | 0.512019 | 8:-86926758 | MsG0880047478.01.T01:CDS |
| AAGGGAACAGCTGGGGAGGG+TGG | 0.512697 | 8:-86926858 | MsG0880047478.01.T01:CDS |
| TGGTGCGGATAATTGGTCTT+CGG | 0.515688 | 8:-86927426 | MsG0880047478.01.T01:CDS |
| GGATAATTGGTCTTCGGCGG+AGG | 0.516164 | 8:-86927420 | MsG0880047478.01.T01:CDS |
| TGGTGGAGTTGAGTTTGGAA+TGG | 0.516645 | 8:-86927033 | MsG0880047478.01.T01:CDS |
| GAATCACTGCTTGCAAGGGT+TGG | 0.517749 | 8:-86926753 | MsG0880047478.01.T01:CDS |
| GAGTGGGTTTAAGAAGACTA+AGG | 0.518261 | 8:-86927171 | MsG0880047478.01.T01:CDS |
| CAGCTTTCGTTCCCTCAACT+CGG | 0.520476 | 8:+86926655 | None:intergenic |
| ATCAAGAGCCATATAGATCT+CGG | 0.521232 | 8:+86927562 | None:intergenic |
| CGGTGATAGTATTGCTAAGA+TGG | 0.521917 | 8:-86927483 | MsG0880047478.01.T01:CDS |
| GACGTCACGCCGGAGAAGCT+CGG | 0.523942 | 8:-86927596 | MsG0880047478.01.T01:CDS |
| GGACGAGGTTGAAGTGGAAA+AGG | 0.529837 | 8:-86927240 | MsG0880047478.01.T01:CDS |
| ATGAATGTAACATCAGTCAA+TGG | 0.529961 | 8:+86926414 | None:intergenic |
| CCAAAACCTCAAGGTCTTGG+TGG | 0.530093 | 8:-86926918 | MsG0880047478.01.T01:CDS |
| CCTCAGGAGACGCTTGAAGC+CGG | 0.531327 | 8:-86927338 | MsG0880047478.01.T01:CDS |
| GTGTTAGTAGCCTTGACAAT+GGG | 0.532218 | 8:-86926605 | MsG0880047478.01.T01:CDS |
| GACGTCAACGCCACGGCAAG+CGG | 0.534189 | 8:+86927613 | None:intergenic |
| GATTTGGCTACAGCTTTGGA+AGG | 0.534366 | 8:-86927134 | MsG0880047478.01.T01:CDS |
| AGGATATCGGATCCATTGGT+TGG | 0.534539 | 8:+86927959 | None:intergenic |
| CGCCGAGGGCGCGTGAAGGT+GGG | 0.537756 | 8:+86927915 | None:intergenic |
| CCTAAGGGAACAGCTGGGGA+GGG | 0.538111 | 8:-86926861 | MsG0880047478.01.T01:CDS |
| CGGCGGCGTAGGCGTCTTCG+GGG | 0.539644 | 8:+86927828 | None:intergenic |
| GAGTTGAGCTCTTGCAGACA+GGG | 0.540382 | 8:-86926896 | MsG0880047478.01.T01:CDS |
| ACCGATGGATTCGGCGGCGT+AGG | 0.540618 | 8:+86927817 | None:intergenic |
| AACCCACTCACAAGCTCTTG+AGG | 0.541356 | 8:+86927185 | None:intergenic |
| TCTTCCGAGATATACATCTC+AGG | 0.542576 | 8:+86926795 | None:intergenic |
| AATGCATTCGAAAACATTGA+CGG | 0.546178 | 8:+86927670 | None:intergenic |
| ACCTAAGGGAACAGCTGGGG+AGG | 0.547322 | 8:-86926862 | MsG0880047478.01.T01:CDS |
| CATTGAAGGGCTCTCCTGGA+AGG | 0.547855 | 8:-86926293 | MsG0880047478.01.T01:CDS |
| GTGAAGGTGGGAACCACTCG+CGG | 0.547968 | 8:+86927927 | None:intergenic |
| TTTATAAGTCGAACCCTCAA+AGG | 0.548461 | 8:+86926501 | None:intergenic |
| TTGACCACTAGAAGCGGCGA+GGG | 0.560772 | 8:+86927787 | None:intergenic |
| ACCACTCGCGGGTTTGGAGA+AGG | 0.560880 | 8:+86927939 | None:intergenic |
| TTAGTCACAAACTTGAGAGT+GGG | 0.563058 | 8:-86926119 | MsG0880047478.01.T01:CDS |
| GATCCCCTCGCCGCTTCTAG+TGG | 0.564166 | 8:-86927791 | MsG0880047478.01.T01:CDS |
| GATGCTCGCTTGGTGTTCGA+CGG | 0.568371 | 8:+86927391 | None:intergenic |
| CAGGGAATCACTGCTTGCAA+GGG | 0.568503 | 8:-86926757 | MsG0880047478.01.T01:CDS |
| TGAGTCGATTGTGTTGCCTC+CGG | 0.572205 | 8:+86927086 | None:intergenic |
| GCCTACGCCGCCGAATCCAT+CGG | 0.572824 | 8:-86927818 | MsG0880047478.01.T01:CDS |
| GTCGTCGTCACCGCTTGCCG+TGG | 0.574391 | 8:-86927623 | MsG0880047478.01.T01:CDS |
| TCTATACGGCCTGCTTCGGA+GGG | 0.576275 | 8:-86926162 | MsG0880047478.01.T01:CDS |
| GGGTCCTGAGATGTATATCT+CGG | 0.579735 | 8:-86926799 | MsG0880047478.01.T01:CDS |
| GTGCCAGAGATTCCATTGAA+GGG | 0.583696 | 8:-86926306 | MsG0880047478.01.T01:CDS |
| GGGTTTAAGAAGACTAAGGA+TGG | 0.584560 | 8:-86927167 | MsG0880047478.01.T01:CDS |
| TGAAGGTGGGAACCACTCGC+GGG | 0.589229 | 8:+86927928 | None:intergenic |
| GCGATGCTTGCCACAATGCA+CGG | 0.590870 | 8:-86927503 | MsG0880047478.01.T01:CDS |
| TGTTAGGACAGCGGCGTCAG+AGG | 0.591445 | 8:-86926574 | MsG0880047478.01.T01:CDS |
| AGCAGGCCGTATAGAAACTC+CGG | 0.591774 | 8:+86926170 | None:intergenic |
| GGATTTGAAGGGAATTATGG+TGG | 0.591855 | 8:-86927050 | MsG0880047478.01.T01:CDS |
| GAAACAGGACGAGGTTGAAG+TGG | 0.592449 | 8:-86927246 | MsG0880047478.01.T01:CDS |
| GAAGGTTTCAATGATGCTTG+GGG | 0.592536 | 8:-86926984 | MsG0880047478.01.T01:CDS |
| GGTTTCAATGATGCTTGGGG+TGG | 0.593341 | 8:-86926981 | MsG0880047478.01.T01:CDS |
| GGCGAGGGGATCGTCACCGA+TGG | 0.595208 | 8:+86927802 | None:intergenic |
| ATCGACTCATATAAATGTGG+AGG | 0.595297 | 8:-86927072 | MsG0880047478.01.T01:CDS |
| TCAACTCCACCAAGACCTTG+AGG | 0.596281 | 8:+86926912 | None:intergenic |
| CGTGTTAGTAGCCTTGACAA+TGG | 0.597866 | 8:-86926606 | MsG0880047478.01.T01:CDS |
| GCGGCGCGTGTGGCGGAAAG+CGG | 0.598180 | 8:+86927886 | None:intergenic |
| GGGCCAGATGTTGCACCTAA+GGG | 0.598749 | 8:-86926876 | MsG0880047478.01.T01:CDS |
| GTCGATTGTGTTGCCTCCGG+AGG | 0.599262 | 8:+86927089 | None:intergenic |
| TACTACATTGCCGCCTCCGG+AGG | 0.600342 | 8:-86927102 | MsG0880047478.01.T01:CDS |
| TGGCAAGCATCGCGGCAAGA+CGG | 0.603264 | 8:+86927513 | None:intergenic |
| TAGTCACAAACTTGAGAGTG+GGG | 0.607740 | 8:-86926118 | MsG0880047478.01.T01:CDS |
| AGAGCGCCGAGGGCGCGTGA+AGG | 0.607776 | 8:+86927911 | None:intergenic |
| CATGAAACATCCCATTGTCA+AGG | 0.611835 | 8:+86926595 | None:intergenic |
| GGAGTTTGTGGGTCCAACCA+AGG | 0.612587 | 8:-86926943 | MsG0880047478.01.T01:CDS |
| TTGCCACCTAAAAGTTCCGA+TGG | 0.614573 | 8:-86926702 | MsG0880047478.01.T01:CDS |
| GCTAGCCACCACTTCATCAC+CGG | 0.615446 | 8:+86927319 | None:intergenic |
| AAACCTCAAGAGCTTGTGAG+TGG | 0.617162 | 8:-86927188 | MsG0880047478.01.T01:CDS |
| GTTAGTCACAAACTTGAGAG+TGG | 0.619560 | 8:-86926120 | MsG0880047478.01.T01:CDS |
| AGTCGAACCCTCAAAGGCAA+AGG | 0.619988 | 8:+86926507 | None:intergenic |
| TTGCACCTAAGGGAACAGCT+GGG | 0.620173 | 8:-86926866 | MsG0880047478.01.T01:CDS |
| GTGAAGAAAACCGAAATGAA+GGG | 0.622972 | 8:-86926819 | MsG0880047478.01.T01:CDS |
| TCAATGGAGCAAGCAAATCA+GGG | 0.624425 | 8:+86926430 | None:intergenic |
| TCTTGGTTGCTGCGAATGCG+CGG | 0.624768 | 8:+86927867 | None:intergenic |
| TCACGCCGGAGAAGCTCGGT+CGG | 0.626294 | 8:-86927592 | MsG0880047478.01.T01:CDS |
| GGAAAGCGGAAAGAGCGCCG+AGG | 0.627107 | 8:+86927900 | None:intergenic |
| CCGGCGTGACGTCAACGCCA+CGG | 0.627417 | 8:+86927606 | None:intergenic |
| CTCTCTCTACAACCAACCAA+TGG | 0.628001 | 8:-86927971 | MsG0880047478.01.T01:CDS |
| TCGACTTATAAAACGACACA+CGG | 0.628340 | 8:-86926490 | MsG0880047478.01.T01:CDS |
| TCTAGTGGTCAAGTCATCGT+CGG | 0.635269 | 8:-86927776 | MsG0880047478.01.T01:CDS |
| AACCTCAAGAGCTTGTGAGT+GGG | 0.636446 | 8:-86927187 | MsG0880047478.01.T01:CDS |
| ATCGTCACCGATGGATTCGG+CGG | 0.637634 | 8:+86927811 | None:intergenic |
| TGCGGATAATTGGTCTTCGG+CGG | 0.637961 | 8:-86927423 | MsG0880047478.01.T01:CDS |
| ATTGACGGAGTTATCGTGAT+CGG | 0.638820 | 8:+86927685 | None:intergenic |
| CGACTTATAAAACGACACAC+GGG | 0.639207 | 8:-86926489 | MsG0880047478.01.T01:CDS |
| TCGACTCATATAAATGTGGA+GGG | 0.639675 | 8:-86927071 | MsG0880047478.01.T01:CDS |
| CACTGGTCACCGGAGCAGCA+AGG | 0.640543 | 8:+86927297 | None:intergenic |
| TCCTTCTCCAAACCCGCGAG+TGG | 0.640735 | 8:-86927940 | MsG0880047478.01.T01:CDS |
| ACCAAGGCACCAAAACCTCA+AGG | 0.643811 | 8:-86926927 | MsG0880047478.01.T01:CDS |
| AATACTATCACCGTGCATTG+TGG | 0.645257 | 8:+86927493 | None:intergenic |
| GGCGGCGTAGGCGTCTTCGG+GGG | 0.652596 | 8:+86927829 | None:intergenic |
| TGCACCTAAGGGAACAGCTG+GGG | 0.655359 | 8:-86926865 | MsG0880047478.01.T01:CDS |
| GCTTGAAGCCGGTGATGAAG+TGG | 0.656833 | 8:-86927327 | MsG0880047478.01.T01:CDS |
| GATGACTTGACCACTAGAAG+CGG | 0.657745 | 8:+86927781 | None:intergenic |
| CCGGCTTCAAGCGTCTCCTG+AGG | 0.659501 | 8:+86927338 | None:intergenic |
| ACAATCGACTCATATAAATG+TGG | 0.663324 | 8:-86927075 | MsG0880047478.01.T01:CDS |
| AGAGAATAAGATCCGTGGTG+CGG | 0.672663 | 8:-86927441 | MsG0880047478.01.T01:CDS |
| CCGTGGCGTTGACGTCACGC+CGG | 0.675922 | 8:-86927606 | MsG0880047478.01.T01:CDS |
| GACTTATAAAACGACACACG+GGG | 0.677322 | 8:-86926488 | MsG0880047478.01.T01:CDS |
| GATGTTTCATGTTAGGACAG+CGG | 0.677369 | 8:-86926583 | MsG0880047478.01.T01:CDS |
| TAAATGTGGAGGGATTTGAA+GGG | 0.679949 | 8:-86927061 | MsG0880047478.01.T01:CDS |
| TGAAGCCGGTGATGAAGTGG+TGG | 0.680677 | 8:-86927324 | MsG0880047478.01.T01:CDS |
| GTGCATTGTGGCAAGCATCG+CGG | 0.692108 | 8:+86927505 | None:intergenic |
| CTTGACCACTAGAAGCGGCG+AGG | 0.694749 | 8:+86927786 | None:intergenic |
| GATACAGAGAATAAGATCCG+TGG | 0.697089 | 8:-86927446 | MsG0880047478.01.T01:CDS |
| TGACCACTAGAAGCGGCGAG+GGG | 0.699868 | 8:+86927788 | None:intergenic |
| ACAGAAGCAGAAACAGGACG+AGG | 0.708900 | 8:-86927255 | MsG0880047478.01.T01:CDS |
| TAACTAAACGATAAACGATG+CGG | 0.725905 | 8:+86927738 | None:intergenic |
| AAGACCAATTATCCGCACCA+CGG | 0.728753 | 8:+86927429 | None:intergenic |
| GGATATTGCTAACACCACGA+AGG | 0.747638 | 8:+86927534 | None:intergenic |
| GGGAAAGACAGACTTCTACG+AGG | 0.806695 | 8:-86926142 | MsG0880047478.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGCAAACTAAATTTCATAAT+CGG | + | Chr8:86927547-86927566 | None:intergenic | 20.0% |
| ! | ATCGTTTATCGTTTAGTTAA+CGG | - | Chr8:86926353-86926372 | MsG0880047478.01.T01:CDS | 25.0% |
| ! | CTAAATTTCATAATCGGTAT+AGG | + | Chr8:86927541-86927560 | None:intergenic | 25.0% |
| !!! | GGGTTGATAAAGAAATTAAA+TGG | - | Chr8:86927755-86927774 | MsG0880047478.01.T01:CDS | 25.0% |
| AAGAAATTAGTGTAGAGTTC+AGG | - | Chr8:86927311-86927330 | MsG0880047478.01.T01:CDS | 30.0% | |
| AATGCATTCGAAAACATTGA+CGG | + | Chr8:86926420-86926439 | None:intergenic | 30.0% | |
| AGAAATTAGTGTAGAGTTCA+GGG | - | Chr8:86927312-86927331 | MsG0880047478.01.T01:CDS | 30.0% | |
| AGAAGATGATGAAGAAATTG+AGG | - | Chr8:86927849-86927868 | MsG0880047478.01.T01:CDS | 30.0% | |
| ATGAATGTAACATCAGTCAA+TGG | + | Chr8:86927676-86927695 | None:intergenic | 30.0% | |
| TAACTAAACGATAAACGATG+CGG | + | Chr8:86926352-86926371 | None:intergenic | 30.0% | |
| TTCAGTTTCTTTATCACCAT+CGG | + | Chr8:86927404-86927423 | None:intergenic | 30.0% | |
| ! | ACAATCGACTCATATAAATG+TGG | - | Chr8:86927012-86927031 | MsG0880047478.01.T01:CDS | 30.0% |
| !! | TCCAAAAGCTGTTTTGAATA+GGG | - | Chr8:86927735-86927754 | MsG0880047478.01.T01:CDS | 30.0% |
| AATCTCTTCATTCTGTTCAC+TGG | + | Chr8:86926810-86926829 | None:intergenic | 35.0% | |
| ACAATGGGATGTTTCATGTT+AGG | - | Chr8:86927497-86927516 | MsG0880047478.01.T01:CDS | 35.0% | |
| ATAAATGTGGAGGGATTTGA+AGG | - | Chr8:86927025-86927044 | MsG0880047478.01.T01:CDS | 35.0% | |
| ATCAAGAGCCATATAGATCT+CGG | + | Chr8:86926528-86926547 | None:intergenic | 35.0% | |
| GAGAAACCTTCAAAAGAGTT+GGG | + | Chr8:86927717-86927736 | None:intergenic | 35.0% | |
| GATGAAGAAATTGAGGTAGT+TGG | - | Chr8:86927856-86927875 | MsG0880047478.01.T01:CDS | 35.0% | |
| GTGAAGAAAACCGAAATGAA+GGG | - | Chr8:86927268-86927287 | MsG0880047478.01.T01:CDS | 35.0% | |
| TAAATGTGGAGGGATTTGAA+GGG | - | Chr8:86927026-86927045 | MsG0880047478.01.T01:CDS | 35.0% | |
| TCGACTCATATAAATGTGGA+GGG | - | Chr8:86927016-86927035 | MsG0880047478.01.T01:CDS | 35.0% | |
| TCGACTTATAAAACGACACA+CGG | - | Chr8:86927597-86927616 | MsG0880047478.01.T01:CDS | 35.0% | |
| TCTTCTTCGTTAGAATCTAC+TGG | + | Chr8:86927835-86927854 | None:intergenic | 35.0% | |
| TGAAGGTTTCAATGATGCTT+GGG | - | Chr8:86927102-86927121 | MsG0880047478.01.T01:CDS | 35.0% | |
| TTAGTCACAAACTTGAGAGT+GGG | - | Chr8:86927968-86927987 | MsG0880047478.01.T01:CDS | 35.0% | |
| TTGAAGGTTTCAATGATGCT+TGG | - | Chr8:86927101-86927120 | MsG0880047478.01.T01:CDS | 35.0% | |
| TTTATAAGTCGAACCCTCAA+AGG | + | Chr8:86927589-86927608 | None:intergenic | 35.0% | |
| ! | AATTATGGTGGAGTTGAGTT+TGG | - | Chr8:86927049-86927068 | MsG0880047478.01.T01:CDS | 35.0% |
| ! | ACCCTATTCAAAACAGCTTT+TGG | + | Chr8:86927739-86927758 | None:intergenic | 35.0% |
| ! | ATCGACTCATATAAATGTGG+AGG | - | Chr8:86927015-86927034 | MsG0880047478.01.T01:CDS | 35.0% |
| ! | TCAATTGGTGAAGCTTTTGA+AGG | - | Chr8:86927085-86927104 | MsG0880047478.01.T01:CDS | 35.0% |
| ! | TTATCACCATCGGAACTTTT+AGG | + | Chr8:86927394-86927413 | None:intergenic | 35.0% |
| !! | AAGCTCTTGAGGTTTGTTAA+TGG | + | Chr8:86926894-86926913 | None:intergenic | 35.0% |
| !! | CTCCAAAAGCTGTTTTGAAT+AGG | - | Chr8:86927734-86927753 | MsG0880047478.01.T01:CDS | 35.0% |
| !! | TTTTAGGTGGCAAAGTTTTG+AGG | + | Chr8:86927378-86927397 | None:intergenic | 35.0% |
| AACGATAAACGATGCGGTAA+CGG | + | Chr8:86926346-86926365 | None:intergenic | 40.0% | |
| AATACTATCACCGTGCATTG+TGG | + | Chr8:86926597-86926616 | None:intergenic | 40.0% | |
| ATTGACGGAGTTATCGTGAT+CGG | + | Chr8:86926405-86926424 | None:intergenic | 40.0% | |
| CAAAGCTGTAGCCAAATCAT+TGG | + | Chr8:86926951-86926970 | None:intergenic | 40.0% | |
| CATGAAACATCCCATTGTCA+AGG | + | Chr8:86927495-86927514 | None:intergenic | 40.0% | |
| CGACTTATAAAACGACACAC+GGG | - | Chr8:86927598-86927617 | MsG0880047478.01.T01:CDS | 40.0% | |
| CGGTGATAGTATTGCTAAGA+TGG | - | Chr8:86926604-86926623 | MsG0880047478.01.T01:CDS | 40.0% | |
| CTTGCAAGGGTTGGATTTAT+GGG | - | Chr8:86927343-86927362 | MsG0880047478.01.T01:CDS | 40.0% | |
| GAAATACGCCGAGATCTATA+TGG | - | Chr8:86926517-86926536 | MsG0880047478.01.T01:CDS | 40.0% | |
| GAAGGTTTCAATGATGCTTG+GGG | - | Chr8:86927103-86927122 | MsG0880047478.01.T01:CDS | 40.0% | |
| GACTTATAAAACGACACACG+GGG | - | Chr8:86927599-86927618 | MsG0880047478.01.T01:CDS | 40.0% | |
| GAGGGATTTGAAGGGAATTA+TGG | - | Chr8:86927034-86927053 | MsG0880047478.01.T01:CDS | 40.0% | |
| GATACAGAGAATAAGATCCG+TGG | - | Chr8:86926641-86926660 | MsG0880047478.01.T01:CDS | 40.0% | |
| GATGTTTCATGTTAGGACAG+CGG | - | Chr8:86927504-86927523 | MsG0880047478.01.T01:CDS | 40.0% | |
| GATTCAACAGAAGCAGAAAC+AGG | - | Chr8:86926826-86926845 | MsG0880047478.01.T01:CDS | 40.0% | |
| GGAATGGAACAAGCTTCAAT+TGG | - | Chr8:86927070-86927089 | MsG0880047478.01.T01:CDS | 40.0% | |
| GGAGAAACCTTCAAAAGAGT+TGG | + | Chr8:86927718-86927737 | None:intergenic | 40.0% | |
| GGATGGTTCTTCCAATGATT+TGG | - | Chr8:86926937-86926956 | MsG0880047478.01.T01:CDS | 40.0% | |
| GGATTTGAAGGGAATTATGG+TGG | - | Chr8:86927037-86927056 | MsG0880047478.01.T01:CDS | 40.0% | |
| GGGTTTAAGAAGACTAAGGA+TGG | - | Chr8:86926920-86926939 | MsG0880047478.01.T01:CDS | 40.0% | |
| GGTGAAGAAAACCGAAATGA+AGG | - | Chr8:86927267-86927286 | MsG0880047478.01.T01:CDS | 40.0% | |
| GTTAACGGAATCTACGTACT+TGG | - | Chr8:86926368-86926387 | MsG0880047478.01.T01:CDS | 40.0% | |
| GTTAGTCACAAACTTGAGAG+TGG | - | Chr8:86927967-86927986 | MsG0880047478.01.T01:CDS | 40.0% | |
| TAGTCACAAACTTGAGAGTG+GGG | - | Chr8:86927969-86927988 | MsG0880047478.01.T01:CDS | 40.0% | |
| TCAATGGAGCAAGCAAATCA+GGG | + | Chr8:86927660-86927679 | None:intergenic | 40.0% | |
| TCTTCCGAGATATACATCTC+AGG | + | Chr8:86927295-86927314 | None:intergenic | 40.0% | |
| TGAATTCTCATTCCGAGTTG+AGG | - | Chr8:86927420-86927439 | MsG0880047478.01.T01:CDS | 40.0% | |
| TTCAAAAGAGTTGGGTCAAC+TGG | + | Chr8:86927709-86927728 | None:intergenic | 40.0% | |
| ! | AGTTGACCCAACTCTTTTGA+AGG | - | Chr8:86927708-86927727 | MsG0880047478.01.T01:CDS | 40.0% |
| ! | CAATGATTTGGCTACAGCTT+TGG | - | Chr8:86926949-86926968 | MsG0880047478.01.T01:CDS | 40.0% |
| ! | GAATTCTCATTCCGAGTTGA+GGG | - | Chr8:86927421-86927440 | MsG0880047478.01.T01:CDS | 40.0% |
| ! | GAGTGGGTTTAAGAAGACTA+AGG | - | Chr8:86926916-86926935 | MsG0880047478.01.T01:CDS | 40.0% |
| ! | GTGTTAGTAGCCTTGACAAT+GGG | - | Chr8:86927482-86927501 | MsG0880047478.01.T01:CDS | 40.0% |
| !!! | GGCGTTGTTTTTGTTGTTCT+TGG | + | Chr8:86926240-86926259 | None:intergenic | 40.0% |
| AAACCTCAAGAGCTTGTGAG+TGG | - | Chr8:86926899-86926918 | MsG0880047478.01.T01:CDS | 45.0% | |
| AACCTCAAGAGCTTGTGAGT+GGG | - | Chr8:86926900-86926919 | MsG0880047478.01.T01:CDS | 45.0% | |
| AAGACCAATTATCCGCACCA+CGG | + | Chr8:86926661-86926680 | None:intergenic | 45.0% | |
| AGAGAATAAGATCCGTGGTG+CGG | - | Chr8:86926646-86926665 | MsG0880047478.01.T01:CDS | 45.0% | |
| AGGATATCGGATCCATTGGT+TGG | + | Chr8:86926131-86926150 | None:intergenic | 45.0% | |
| AGTTTCTATACGGCCTGCTT+CGG | - | Chr8:86927921-86927940 | MsG0880047478.01.T01:CDS | 45.0% | |
| ATCCTTACTCTCAACCTTCC+AGG | + | Chr8:86927811-86927830 | None:intergenic | 45.0% | |
| ATGGCATCACTAGCTGCAAA+TGG | + | Chr8:86926875-86926894 | None:intergenic | 45.0% | |
| CAAACAACTGAGACGTTGTC+CGG | - | Chr8:86927898-86927917 | MsG0880047478.01.T01:CDS | 45.0% | |
| CATCTCAGGACCCTTCATTT+CGG | + | Chr8:86927281-86927300 | None:intergenic | 45.0% | |
| CGTTGTCCGGAGTTTCTATA+CGG | - | Chr8:86927911-86927930 | MsG0880047478.01.T01:CDS | 45.0% | |
| CTCTCTCTACAACCAACCAA+TGG | - | Chr8:86926116-86926135 | MsG0880047478.01.T01:CDS | 45.0% | |
| GAGAAGGATATCGGATCCAT+TGG | + | Chr8:86926135-86926154 | None:intergenic | 45.0% | |
| GATGACTTGACCACTAGAAG+CGG | + | Chr8:86926309-86926328 | None:intergenic | 45.0% | |
| GCTCTTGATATTGTCCTTCG+TGG | - | Chr8:86926539-86926558 | MsG0880047478.01.T01:CDS | 45.0% | |
| GCTTGCAAGGGTTGGATTTA+TGG | - | Chr8:86927342-86927361 | MsG0880047478.01.T01:CDS | 45.0% | |
| GGATATTGCTAACACCACGA+AGG | + | Chr8:86926556-86926575 | None:intergenic | 45.0% | |
| GGGTCCTGAGATGTATATCT+CGG | - | Chr8:86927288-86927307 | MsG0880047478.01.T01:CDS | 45.0% | |
| GTCAATGGAGCAAGCAAATC+AGG | + | Chr8:86927661-86927680 | None:intergenic | 45.0% | |
| GTGCCAGAGATTCCATTGAA+GGG | - | Chr8:86927781-86927800 | MsG0880047478.01.T01:CDS | 45.0% | |
| TCATTCTGTTCACTGGTCAC+CGG | + | Chr8:86926803-86926822 | None:intergenic | 45.0% | |
| TCTAGTGGTCAAGTCATCGT+CGG | - | Chr8:86926311-86926330 | MsG0880047478.01.T01:CDS | 45.0% | |
| TGCGAGATTTGAATTGCCTC+AGG | - | Chr8:86926733-86926752 | MsG0880047478.01.T01:CDS | 45.0% | |
| TGGTGGAGTTGAGTTTGGAA+TGG | - | Chr8:86927054-86927073 | MsG0880047478.01.T01:CDS | 45.0% | |
| TGTGCCAGAGATTCCATTGA+AGG | - | Chr8:86927780-86927799 | MsG0880047478.01.T01:CDS | 45.0% | |
| TTGCCACCTAAAAGTTCCGA+TGG | - | Chr8:86927385-86927404 | MsG0880047478.01.T01:CDS | 45.0% | |
| ! | CGTGTTAGTAGCCTTGACAA+TGG | - | Chr8:86927481-86927500 | MsG0880047478.01.T01:CDS | 45.0% |
| ! | TCACCATCGGAACTTTTAGG+TGG | + | Chr8:86927391-86927410 | None:intergenic | 45.0% |
| !! | AAAGGCAAAGGTGTCAGCTT+CGG | + | Chr8:86927571-86927590 | None:intergenic | 45.0% |
| !! | GATTTGGCTACAGCTTTGGA+AGG | - | Chr8:86926953-86926972 | MsG0880047478.01.T01:CDS | 45.0% |
| !! | TGGTGCGGATAATTGGTCTT+CGG | - | Chr8:86926661-86926680 | MsG0880047478.01.T01:CDS | 45.0% |
| AACCCACTCACAAGCTCTTG+AGG | + | Chr8:86926905-86926924 | None:intergenic | 50.0% | |
| ACAGAAGCAGAAACAGGACG+AGG | - | Chr8:86926832-86926851 | MsG0880047478.01.T01:CDS | 50.0% | |
| ACTCGATGCTTCGGAGTTTG+TGG | - | Chr8:86927132-86927151 | MsG0880047478.01.T01:CDS | 50.0% | |
| AGATCCGTGGTGCGGATAAT+TGG | - | Chr8:86926654-86926673 | MsG0880047478.01.T01:CDS | 50.0% | |
| AGCAGGCCGTATAGAAACTC+CGG | + | Chr8:86927920-86927939 | None:intergenic | 50.0% | |
| AGCTGACACCTTTGCCTTTG+AGG | - | Chr8:86927572-86927591 | MsG0880047478.01.T01:CDS | 50.0% | |
| AGTCGAACCCTCAAAGGCAA+AGG | + | Chr8:86927583-86927602 | None:intergenic | 50.0% | |
| ATTCCATTGAAGGGCTCTCC+TGG | - | Chr8:86927790-86927809 | MsG0880047478.01.T01:CDS | 50.0% | |
| CAGCTTTCGTTCCCTCAACT+CGG | + | Chr8:86927435-86927454 | None:intergenic | 50.0% | |
| CAGGGAATCACTGCTTGCAA+GGG | - | Chr8:86927330-86927349 | MsG0880047478.01.T01:CDS | 50.0% | |
| CCAAAACCTCAAGGTCTTGG+TGG | - | Chr8:86927169-86927188 | MsG0880047478.01.T01:CDS | 50.0% | |
| CTCCTGGAAGGTTGAGAGTA+AGG | - | Chr8:86927806-86927825 | MsG0880047478.01.T01:CDS | 50.0% | |
| CTCGATGCTTCGGAGTTTGT+GGG | - | Chr8:86927133-86927152 | MsG0880047478.01.T01:CDS | 50.0% | |
| GAAACAGGACGAGGTTGAAG+TGG | - | Chr8:86926841-86926860 | MsG0880047478.01.T01:CDS | 50.0% | |
| GAATCACTGCTTGCAAGGGT+TGG | - | Chr8:86927334-86927353 | MsG0880047478.01.T01:CDS | 50.0% | |
| GAGCCCTTCAATGGAATCTC+TGG | + | Chr8:86927787-86927806 | None:intergenic | 50.0% | |
| GAGTTGAGCTCTTGCAGACA+GGG | - | Chr8:86927191-86927210 | MsG0880047478.01.T01:CDS | 50.0% | |
| GCACCAAAACCTCAAGGTCT+TGG | - | Chr8:86927166-86927185 | MsG0880047478.01.T01:CDS | 50.0% | |
| GCGGGTTTGGAGAAGGATAT+CGG | + | Chr8:86926144-86926163 | None:intergenic | 50.0% | |
| GCTGACACCTTTGCCTTTGA+GGG | - | Chr8:86927573-86927592 | MsG0880047478.01.T01:CDS | 50.0% | |
| GGACGAGGTTGAAGTGGAAA+AGG | - | Chr8:86926847-86926866 | MsG0880047478.01.T01:CDS | 50.0% | |
| GGGAAAGACAGACTTCTACG+AGG | - | Chr8:86927945-86927964 | MsG0880047478.01.T01:CDS | 50.0% | |
| GGGTGGTGCACTTGAGAATT+TGG | - | Chr8:86927246-86927265 | MsG0880047478.01.T01:CDS | 50.0% | |
| GGTTTCAATGATGCTTGGGG+TGG | - | Chr8:86927106-86927125 | MsG0880047478.01.T01:CDS | 50.0% | |
| GTTCCCTTAGGTGCAACATC+TGG | + | Chr8:86927217-86927236 | None:intergenic | 50.0% | |
| TATTTCCGACCGAGCTTCTC+CGG | + | Chr8:86926503-86926522 | None:intergenic | 50.0% | |
| TCAACTCCACCAAGACCTTG+AGG | + | Chr8:86927178-86927197 | None:intergenic | 50.0% | |
| TCAGGGAATCACTGCTTGCA+AGG | - | Chr8:86927329-86927348 | MsG0880047478.01.T01:CDS | 50.0% | |
| TGAGTCGATTGTGTTGCCTC+CGG | + | Chr8:86927004-86927023 | None:intergenic | 50.0% | |
| TGTTACTACATTGCCGCCTC+CGG | - | Chr8:86926982-86927001 | MsG0880047478.01.T01:CDS | 50.0% | |
| TTCAATGATGCTTGGGGTGG+TGG | - | Chr8:86927109-86927128 | MsG0880047478.01.T01:CDS | 50.0% | |
| TTGCACCTAAGGGAACAGCT+GGG | - | Chr8:86927221-86927240 | MsG0880047478.01.T01:CDS | 50.0% | |
| ! | ACCAAGGCACCAAAACCTCA+AGG | - | Chr8:86927160-86927179 | MsG0880047478.01.T01:CDS | 50.0% |
| ! | CAAATGCATCGATGCTCGCT+TGG | + | Chr8:86926709-86926728 | None:intergenic | 50.0% |
| ! | CCACCAAGACCTTGAGGTTT+TGG | + | Chr8:86927172-86927191 | None:intergenic | 50.0% |
| !! | TGCGGATAATTGGTCTTCGG+CGG | - | Chr8:86926664-86926683 | MsG0880047478.01.T01:CDS | 50.0% |
| !!! | ACCTTGAGGTTTTGGTGCCT+TGG | + | Chr8:86927164-86927183 | None:intergenic | 50.0% |
| !!! | TGAGGTTTTGGTGCCTTGGT+TGG | + | Chr8:86927160-86927179 | None:intergenic | 50.0% |
| AGGGCCAGATGTTGCACCTA+AGG | - | Chr8:86927210-86927229 | MsG0880047478.01.T01:CDS | 55.0% | |
| CATTGAAGGGCTCTCCTGGA+AGG | - | Chr8:86927794-86927813 | MsG0880047478.01.T01:CDS | 55.0% | |
| CTTCCAGGAGAGCCCTTCAA+TGG | + | Chr8:86927796-86927815 | None:intergenic | 55.0% | |
| GCGATGCTTGCCACAATGCA+CGG | - | Chr8:86926584-86926603 | MsG0880047478.01.T01:CDS | 55.0% | |
| GCTAGCCACCACTTCATCAC+CGG | + | Chr8:86926771-86926790 | None:intergenic | 55.0% | |
| GCTTGAAGCCGGTGATGAAG+TGG | - | Chr8:86926760-86926779 | MsG0880047478.01.T01:CDS | 55.0% | |
| GGAGTTGAGCTCTTGCAGAC+AGG | - | Chr8:86927190-86927209 | MsG0880047478.01.T01:CDS | 55.0% | |
| GGAGTTTGTGGGTCCAACCA+AGG | - | Chr8:86927144-86927163 | MsG0880047478.01.T01:CDS | 55.0% | |
| GGGCCAGATGTTGCACCTAA+GGG | - | Chr8:86927211-86927230 | MsG0880047478.01.T01:CDS | 55.0% | |
| GTTGCACCTAAGGGAACAGC+TGG | - | Chr8:86927220-86927239 | MsG0880047478.01.T01:CDS | 55.0% | |
| TCTATACGGCCTGCTTCGGA+GGG | - | Chr8:86927925-86927944 | MsG0880047478.01.T01:CDS | 55.0% | |
| TCTGTCTTTCCCTCCGAAGC+AGG | + | Chr8:86927937-86927956 | None:intergenic | 55.0% | |
| TCTTGGTTGCTGCGAATGCG+CGG | + | Chr8:86926223-86926242 | None:intergenic | 55.0% | |
| TGAAGCCGGTGATGAAGTGG+TGG | - | Chr8:86926763-86926782 | MsG0880047478.01.T01:CDS | 55.0% | |
| TGCACCTAAGGGAACAGCTG+GGG | - | Chr8:86927222-86927241 | MsG0880047478.01.T01:CDS | 55.0% | |
| TTCTATACGGCCTGCTTCGG+AGG | - | Chr8:86927924-86927943 | MsG0880047478.01.T01:CDS | 55.0% | |
| TTGACCACTAGAAGCGGCGA+GGG | + | Chr8:86926303-86926322 | None:intergenic | 55.0% | |
| ! | ATCGTCACCGATGGATTCGG+CGG | + | Chr8:86926279-86926298 | None:intergenic | 55.0% |
| ! | GGGATCGTCACCGATGGATT+CGG | + | Chr8:86926282-86926301 | None:intergenic | 55.0% |
| ! | GTGCATTGTGGCAAGCATCG+CGG | + | Chr8:86926585-86926604 | None:intergenic | 55.0% |
| !! | GATGCTCGCTTGGTGTTCGA+CGG | + | Chr8:86926699-86926718 | None:intergenic | 55.0% |
| !! | GGATAATTGGTCTTCGGCGG+AGG | - | Chr8:86926667-86926686 | MsG0880047478.01.T01:CDS | 55.0% |
| ACCACTCGCGGGTTTGGAGA+AGG | + | Chr8:86926151-86926170 | None:intergenic | 60.0% | |
| ACCTAAGGGAACAGCTGGGG+AGG | - | Chr8:86927225-86927244 | MsG0880047478.01.T01:CDS | 60.0% | |
| CCTAAGGGAACAGCTGGGGA+GGG | - | Chr8:86927226-86927245 | MsG0880047478.01.T01:CDS | 60.0% | |
| CCTCAGGAGACGCTTGAAGC+CGG | - | Chr8:86926749-86926768 | MsG0880047478.01.T01:CDS | 60.0% | |
| CTTGACCACTAGAAGCGGCG+AGG | + | Chr8:86926304-86926323 | None:intergenic | 60.0% | |
| GATTGTGTTGCCTCCGGAGG+CGG | + | Chr8:86926998-86927017 | None:intergenic | 60.0% | |
| GTCGATTGTGTTGCCTCCGG+AGG | + | Chr8:86927001-86927020 | None:intergenic | 60.0% | |
| GTGAAGGTGGGAACCACTCG+CGG | + | Chr8:86926163-86926182 | None:intergenic | 60.0% | |
| TACTACATTGCCGCCTCCGG+AGG | - | Chr8:86926985-86927004 | MsG0880047478.01.T01:CDS | 60.0% | |
| TCCTTCTCCAAACCCGCGAG+TGG | - | Chr8:86926147-86926166 | MsG0880047478.01.T01:CDS | 60.0% | |
| TGAAGGTGGGAACCACTCGC+GGG | + | Chr8:86926162-86926181 | None:intergenic | 60.0% | |
| TGACCACTAGAAGCGGCGAG+GGG | + | Chr8:86926302-86926321 | None:intergenic | 60.0% | |
| TGTTAGGACAGCGGCGTCAG+AGG | - | Chr8:86927513-86927532 | MsG0880047478.01.T01:CDS | 60.0% | |
| ! | TGGCAAGCATCGCGGCAAGA+CGG | + | Chr8:86926577-86926596 | None:intergenic | 60.0% |
| !! | GAAAGCGGAAAGAGCGCCGA+GGG | + | Chr8:86926189-86926208 | None:intergenic | 60.0% |
| !! | GGGTGGTGGACTCGATGCTT+CGG | - | Chr8:86927123-86927142 | MsG0880047478.01.T01:CDS | 60.0% |
| AAGGGAACAGCTGGGGAGGG+TGG | - | Chr8:86927229-86927248 | MsG0880047478.01.T01:CDS | 65.0% | |
| CACTGGTCACCGGAGCAGCA+AGG | + | Chr8:86926793-86926812 | None:intergenic | 65.0% | |
| CCCTCCCCAGCTGTTCCCTT+AGG | + | Chr8:86927229-86927248 | None:intergenic | 65.0% | |
| CCGGCTTCAAGCGTCTCCTG+AGG | + | Chr8:86926752-86926771 | None:intergenic | 65.0% | |
| GACGTCAACGCCACGGCAAG+CGG | + | Chr8:86926477-86926496 | None:intergenic | 65.0% | |
| GACGTCACGCCGGAGAAGCT+CGG | - | Chr8:86926491-86926510 | MsG0880047478.01.T01:CDS | 65.0% | |
| GATCCCCTCGCCGCTTCTAG+TGG | - | Chr8:86926296-86926315 | MsG0880047478.01.T01:CDS | 65.0% | |
| GCCTACGCCGCCGAATCCAT+CGG | - | Chr8:86926269-86926288 | MsG0880047478.01.T01:CDS | 65.0% | |
| GTGGGAACCACTCGCGGGTT+TGG | + | Chr8:86926157-86926176 | None:intergenic | 65.0% | |
| TCACGCCGGAGAAGCTCGGT+CGG | - | Chr8:86926495-86926514 | MsG0880047478.01.T01:CDS | 65.0% | |
| TTCCCACCTTCACGCGCCCT+CGG | - | Chr8:86926170-86926189 | MsG0880047478.01.T01:CDS | 65.0% | |
| TTCGGCGGCGTAGGCGTCTT+CGG | + | Chr8:86926264-86926283 | None:intergenic | 65.0% | |
| ! | ACCGATGGATTCGGCGGCGT+AGG | + | Chr8:86926273-86926292 | None:intergenic | 65.0% |
| !! | GGAAAGCGGAAAGAGCGCCG+AGG | + | Chr8:86926190-86926209 | None:intergenic | 65.0% |
| !! | GGTGGCTAGCCTTGCTGCTC+CGG | - | Chr8:86926781-86926800 | MsG0880047478.01.T01:CDS | 65.0% |
| CCGGCGTGACGTCAACGCCA+CGG | + | Chr8:86926484-86926503 | None:intergenic | 70.0% | |
| GGCGAGGGGATCGTCACCGA+TGG | + | Chr8:86926288-86926307 | None:intergenic | 70.0% | |
| GTCGTCGTCACCGCTTGCCG+TGG | - | Chr8:86926464-86926483 | MsG0880047478.01.T01:CDS | 70.0% | |
| TCGGCGGCGTAGGCGTCTTC+GGG | + | Chr8:86926263-86926282 | None:intergenic | 70.0% | |
| !! | CCGTGGCGTTGACGTCACGC+CGG | - | Chr8:86926481-86926500 | MsG0880047478.01.T01:CDS | 70.0% |
| CGAATGCGCGGCGCGTGTGG+CGG | + | Chr8:86926211-86926230 | None:intergenic | 75.0% | |
| CGGCGGCGTAGGCGTCTTCG+GGG | + | Chr8:86926262-86926281 | None:intergenic | 75.0% | |
| CTGCGAATGCGCGGCGCGTG+TGG | + | Chr8:86926214-86926233 | None:intergenic | 75.0% | |
| GGCGGCGTAGGCGTCTTCGG+GGG | + | Chr8:86926261-86926280 | None:intergenic | 75.0% | |
| ! | CGCCGAGGGCGCGTGAAGGT+GGG | + | Chr8:86926175-86926194 | None:intergenic | 75.0% |
| ! | GCGGCGCGTGTGGCGGAAAG+CGG | + | Chr8:86926204-86926223 | None:intergenic | 75.0% |
| !! | AGAGCGCCGAGGGCGCGTGA+AGG | + | Chr8:86926179-86926198 | None:intergenic | 75.0% |
| !! | GCGCCGAGGGCGCGTGAAGG+TGG | + | Chr8:86926176-86926195 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 86926101 | 86928008 | 86926101 | ID=MsG0880047478.01;Name=MsG0880047478.01 |
| Chr8 | mRNA | 86926101 | 86928008 | 86926101 | ID=MsG0880047478.01.T01;Parent=MsG0880047478.01;Name=MsG0880047478.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|635 |
| Chr8 | exon | 86926101 | 86928008 | 86926101 | ID=MsG0880047478.01.T01:exon:18526;Parent=MsG0880047478.01.T01 |
| Chr8 | CDS | 86926101 | 86928008 | 86926101 | ID=MsG0880047478.01.T01:cds;Parent=MsG0880047478.01.T01 |
| Gene Sequence |
| Protein sequence |
