Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007761.01.T02 | XP_013463044.1 | 96.581 | 468 | 16 | 0 | 1 | 468 | 1 | 468 | 0 | 804 |
| MsG0280007761.01.T01 | XP_013463044.1 | 96.581 | 468 | 16 | 0 | 1 | 468 | 1 | 468 | 0 | 804 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007761.01.T01 | Q94C59 | 68.129 | 342 | 102 | 3 | 122 | 463 | 200 | 534 | 9.43E-175 | 504 |
| MsG0280007761.01.T02 | Q94C59 | 68.129 | 342 | 102 | 3 | 122 | 463 | 200 | 534 | 9.43E-175 | 504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007761.01.T01 | A0A072V4Y7 | 96.581 | 468 | 16 | 0 | 1 | 468 | 1 | 468 | 0.0 | 804 |
| MsG0280007761.01.T02 | A0A072V4Y7 | 96.581 | 468 | 16 | 0 | 1 | 468 | 1 | 468 | 0.0 | 804 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048701.01 | MsG0280007761.01 | 0.846167 | 2.574977e-59 | 4.393077e-56 |
| MsG0080048781.01 | MsG0280007761.01 | 0.813146 | 2.967026e-51 | 1.922137e-48 |
| MsG0080048829.01 | MsG0280007761.01 | 0.815716 | 8.015265e-52 | 5.568753e-49 |
| MsG0080048842.01 | MsG0280007761.01 | -0.804841 | 1.779706e-49 | 9.272812e-47 |
| MsG0080049140.01 | MsG0280007761.01 | 0.862050 | 6.668817e-64 | 1.926589e-60 |
| MsG0180000076.01 | MsG0280007761.01 | 0.815576 | 8.614517e-52 | 5.961845e-49 |
| MsG0180000353.01 | MsG0280007761.01 | 0.838874 | 2.218983e-57 | 3.011822e-54 |
| MsG0180000360.01 | MsG0280007761.01 | 0.851830 | 6.873577e-61 | 1.408770e-57 |
| MsG0180000373.01 | MsG0280007761.01 | 0.826720 | 2.322980e-54 | 2.196035e-51 |
| MsG0180002421.01 | MsG0280007761.01 | 0.803058 | 4.177455e-49 | 2.078826e-46 |
| MsG0180003232.01 | MsG0280007761.01 | 0.812749 | 3.624114e-51 | 2.323253e-48 |
| MsG0180003427.01 | MsG0280007761.01 | 0.839053 | 1.994625e-57 | 2.722019e-54 |
| MsG0180003485.01 | MsG0280007761.01 | 0.802981 | 4.333233e-49 | 2.152123e-46 |
| MsG0180003796.01 | MsG0280007761.01 | 0.867223 | 1.603183e-65 | 5.554700e-62 |
| MsG0180003994.01 | MsG0280007761.01 | 0.809221 | 2.106441e-50 | 1.229641e-47 |
| MsG0180004126.01 | MsG0280007761.01 | 0.863886 | 1.807263e-64 | 5.565090e-61 |
| MsG0180004806.01 | MsG0280007761.01 | 0.847556 | 1.073238e-59 | 1.914923e-56 |
| MsG0180005667.01 | MsG0280007761.01 | 0.802563 | 5.287048e-49 | 2.598032e-46 |
| MsG0180005835.01 | MsG0280007761.01 | 0.859168 | 4.983968e-63 | 1.304107e-59 |
| MsG0180006260.01 | MsG0280007761.01 | 0.824151 | 9.430383e-54 | 8.285023e-51 |
| MsG0280006311.01 | MsG0280007761.01 | 0.811029 | 8.587672e-51 | 5.259060e-48 |
| MsG0280006540.01 | MsG0280007761.01 | 0.852045 | 5.970889e-61 | 1.232136e-57 |
| MsG0280006563.01 | MsG0280007761.01 | 0.848650 | 5.355312e-60 | 9.894950e-57 |
| MsG0280007359.01 | MsG0280007761.01 | 0.857134 | 2.007033e-62 | 4.903527e-59 |
| MsG0280007601.01 | MsG0280007761.01 | 0.817757 | 2.794145e-52 | 2.052788e-49 |
| MsG0280007761.01 | MsG0280007983.01 | 0.860238 | 2.374064e-63 | 6.445041e-60 |
| MsG0280007761.01 | MsG0280008280.01 | 0.830643 | 2.616514e-55 | 2.773321e-52 |
| MsG0280007761.01 | MsG0280008679.01 | 0.822713 | 2.044723e-53 | 1.724896e-50 |
| MsG0280007761.01 | MsG0280009509.01 | 0.800427 | 1.448429e-48 | 6.742664e-46 |
| MsG0280007761.01 | MsG0280009752.01 | 0.840733 | 7.280108e-58 | 1.046550e-54 |
| MsG0280007761.01 | MsG0280010579.01 | 0.806651 | 7.417710e-50 | 4.047805e-47 |
| MsG0280007761.01 | MsG0280010795.01 | 0.833440 | 5.326931e-56 | 6.135253e-53 |
| MsG0280007761.01 | MsG0280010868.01 | 0.846575 | 1.992449e-59 | 3.444568e-56 |
| MsG0280007761.01 | MsG0280011034.01 | 0.809094 | 2.242576e-50 | 1.304646e-47 |
| MsG0280007761.01 | MsG0280011154.01 | 0.847495 | 1.115153e-59 | 1.985813e-56 |
| MsG0280007761.01 | MsG0280011331.01 | 0.805926 | 1.054551e-49 | 5.649565e-47 |
| MsG0280007761.01 | MsG0380012522.01 | 0.800806 | 1.212557e-48 | 5.698823e-46 |
| MsG0280007761.01 | MsG0380012788.01 | 0.807865 | 4.101663e-50 | 2.310049e-47 |
| MsG0280007761.01 | MsG0380012808.01 | 0.804883 | 1.744471e-49 | 9.099316e-47 |
| MsG0280007761.01 | MsG0380014171.01 | 0.813474 | 2.513790e-51 | 1.643254e-48 |
| MsG0280007761.01 | MsG0380014387.01 | 0.800941 | 1.138144e-48 | 5.367717e-46 |
| MsG0280007761.01 | MsG0380014754.01 | 0.804999 | 1.649837e-49 | 8.630542e-47 |
| MsG0280007761.01 | MsG0380015161.01 | 0.837400 | 5.315734e-57 | 6.896452e-54 |
| MsG0280007761.01 | MsG0380015548.01 | 0.864374 | 1.272985e-64 | 3.987880e-61 |
| MsG0280007761.01 | MsG0380015816.01 | 0.825742 | 3.971055e-54 | 3.651162e-51 |
| MsG0280007761.01 | MsG0380016140.01 | 0.806812 | 6.857549e-50 | 3.758110e-47 |
| MsG0280007761.01 | MsG0380016703.01 | 0.844804 | 6.023443e-59 | 9.837768e-56 |
| MsG0280007761.01 | MsG0380016994.01 | 0.800304 | 1.534589e-48 | 7.121493e-46 |
| MsG0280007761.01 | MsG0380017091.01 | 0.811891 | 5.580722e-51 | 3.495967e-48 |
| MsG0280007761.01 | MsG0380017159.01 | 0.802214 | 6.238984e-49 | 3.038722e-46 |
| MsG0280007761.01 | MsG0380017164.01 | 0.847607 | 1.039091e-59 | 1.856888e-56 |
| MsG0280007761.01 | MsG0380017239.01 | 0.836878 | 7.228566e-57 | 9.231399e-54 |
| MsG0280007761.01 | MsG0380017240.01 | 0.855170 | 7.550138e-62 | 1.727474e-58 |
| MsG0280007761.01 | MsG0380017361.01 | 0.832360 | 9.884342e-56 | 1.102221e-52 |
| MsG0280007761.01 | MsG0380017983.01 | 0.834077 | 3.690905e-56 | 4.332688e-53 |
| MsG0280007761.01 | MsG0380018007.01 | 0.816212 | 6.213416e-52 | 4.375763e-49 |
| MsG0280007761.01 | MsG0480018397.01 | 0.812024 | 5.219644e-51 | 3.281729e-48 |
| MsG0280007761.01 | MsG0480018526.01 | 0.848062 | 7.784727e-60 | 1.411186e-56 |
| MsG0280007761.01 | MsG0480018845.01 | 0.835210 | 1.916209e-56 | 2.327407e-53 |
| MsG0280007761.01 | MsG0480018846.01 | 0.806803 | 6.887032e-50 | 3.773312e-47 |
| MsG0280007761.01 | MsG0480018885.01 | 0.857227 | 1.884656e-62 | 4.618753e-59 |
| MsG0280007761.01 | MsG0480018918.01 | 0.812805 | 3.523241e-51 | 2.261725e-48 |
| MsG0280007761.01 | MsG0480018990.01 | 0.812091 | 5.047875e-51 | 3.179549e-48 |
| MsG0280007761.01 | MsG0480019635.01 | 0.859260 | 4.678394e-63 | 1.227931e-59 |
| MsG0280007761.01 | MsG0480019699.01 | 0.805759 | 1.142901e-49 | 6.097137e-47 |
| MsG0280007761.01 | MsG0480020965.01 | 0.835404 | 1.711821e-56 | 2.091235e-53 |
| MsG0280007761.01 | MsG0480021013.01 | 0.853394 | 2.460210e-61 | 5.307931e-58 |
| MsG0280007761.01 | MsG0480021156.01 | 0.849529 | 3.050556e-60 | 5.799492e-57 |
| MsG0280007761.01 | MsG0480021225.01 | 0.802264 | 6.092880e-49 | 2.971387e-46 |
| MsG0280007761.01 | MsG0480022057.01 | -0.853102 | 2.983133e-61 | 6.372738e-58 |
| MsG0280007761.01 | MsG0480022313.01 | 0.815256 | 1.014835e-51 | 6.961530e-49 |
| MsG0280007761.01 | MsG0480022325.01 | 0.824473 | 7.921265e-54 | 7.023015e-51 |
| MsG0280007761.01 | MsG0480022331.01 | 0.839123 | 1.912676e-57 | 2.615699e-54 |
| MsG0280007761.01 | MsG0480022873.01 | 0.801705 | 7.936235e-49 | 3.815646e-46 |
| MsG0280007761.01 | MsG0480023064.01 | 0.803224 | 3.860503e-49 | 1.929339e-46 |
| MsG0280007761.01 | MsG0480023194.01 | 0.825048 | 5.795854e-54 | 5.224907e-51 |
| MsG0280007761.01 | MsG0480023262.01 | 0.827125 | 1.858811e-54 | 1.778130e-51 |
| MsG0280007761.01 | MsG0480023296.01 | 0.848896 | 4.576267e-60 | 8.524327e-57 |
| MsG0280007761.01 | MsG0480023421.01 | 0.800477 | 1.415347e-48 | 6.596522e-46 |
| MsG0280007761.01 | MsG0480023450.01 | 0.831912 | 1.275633e-55 | 1.404031e-52 |
| MsG0280007761.01 | MsG0480023620.01 | 0.887555 | 1.287532e-72 | 9.619208e-69 |
| MsG0280007761.01 | MsG0480023672.01 | 0.863540 | 2.315088e-64 | 7.042733e-61 |
| MsG0280007761.01 | MsG0580024109.01 | 0.801628 | 8.232099e-49 | 3.950100e-46 |
| MsG0280007761.01 | MsG0580024489.01 | 0.862900 | 3.652348e-64 | 1.087023e-60 |
| MsG0280007761.01 | MsG0580024657.01 | 0.816602 | 5.080635e-52 | 3.616268e-49 |
| MsG0280007761.01 | MsG0580024758.01 | 0.806512 | 7.937342e-50 | 4.316263e-47 |
| MsG0280007761.01 | MsG0580024813.01 | 0.809762 | 1.612174e-50 | 9.547898e-48 |
| MsG0280007761.01 | MsG0580024954.01 | 0.816919 | 4.315249e-52 | 3.098178e-49 |
| MsG0280007761.01 | MsG0580025093.01 | 0.866702 | 2.349577e-65 | 7.994330e-62 |
| MsG0280007761.01 | MsG0580025385.01 | 0.807693 | 4.462127e-50 | 2.501775e-47 |
| MsG0280007761.01 | MsG0580025515.01 | 0.870849 | 1.069092e-66 | 4.221232e-63 |
| MsG0280007761.01 | MsG0580025614.01 | 0.821592 | 3.719968e-53 | 3.039382e-50 |
| MsG0280007761.01 | MsG0580025766.01 | 0.829842 | 4.104504e-55 | 4.251463e-52 |
| MsG0280007761.01 | MsG0580026186.01 | 0.808075 | 3.700933e-50 | 2.095967e-47 |
| MsG0280007761.01 | MsG0580028756.01 | 0.859357 | 4.375784e-63 | 1.152555e-59 |
| MsG0280007761.01 | MsG0580029298.01 | 0.837014 | 6.672411e-57 | 8.556042e-54 |
| MsG0280007761.01 | MsG0580029712.01 | 0.815405 | 9.404034e-52 | 6.477661e-49 |
| MsG0280007761.01 | MsG0680031616.01 | 0.832802 | 7.679034e-56 | 8.676216e-53 |
| MsG0280007761.01 | MsG0680033696.01 | 0.826236 | 3.030054e-54 | 2.825356e-51 |
| MsG0280007761.01 | MsG0780036360.01 | 0.810269 | 1.253420e-50 | 7.521864e-48 |
| MsG0280007761.01 | MsG0780038837.01 | 0.801002 | 1.105571e-48 | 5.222476e-46 |
| MsG0280007761.01 | MsG0780039861.01 | 0.852596 | 4.162670e-61 | 8.741752e-58 |
| MsG0280007761.01 | MsG0780040079.01 | 0.833504 | 5.133364e-56 | 5.923292e-53 |
| MsG0280007761.01 | MsG0780040364.01 | 0.829875 | 4.030719e-55 | 4.178672e-52 |
| MsG0280007761.01 | MsG0780040543.01 | 0.838392 | 2.955993e-57 | 3.953603e-54 |
| MsG0280007761.01 | MsG0780040564.01 | 0.841312 | 5.129075e-58 | 7.506105e-55 |
| MsG0280007761.01 | MsG0780040600.01 | 0.813508 | 2.470881e-51 | 1.616689e-48 |
| MsG0280007761.01 | MsG0780040828.01 | 0.820405 | 6.981225e-53 | 5.518991e-50 |
| MsG0280007761.01 | MsG0780041063.01 | 0.826208 | 3.077867e-54 | 2.867653e-51 |
| MsG0280007761.01 | MsG0780041132.01 | 0.854065 | 1.577533e-61 | 3.480840e-58 |
| MsG0280007761.01 | MsG0780041141.01 | 0.822022 | 2.958936e-53 | 2.447226e-50 |
| MsG0280007761.01 | MsG0780041143.01 | 0.859082 | 5.290227e-63 | 1.379956e-59 |
| MsG0280007761.01 | MsG0780041340.01 | 0.831858 | 1.315174e-55 | 1.445261e-52 |
| MsG0280007761.01 | MsG0780041756.01 | 0.832586 | 8.688501e-56 | 9.754388e-53 |
| MsG0280007761.01 | MsG0880042791.01 | 0.815304 | 9.902789e-52 | 6.802217e-49 |
| MsG0280007761.01 | MsG0880042845.01 | 0.842100 | 3.177084e-58 | 4.766429e-55 |
| MsG0280007761.01 | MsG0880042906.01 | 0.851932 | 6.430366e-61 | 1.321941e-57 |
| MsG0280007761.01 | MsG0880042927.01 | 0.835180 | 1.949284e-56 | 2.365285e-53 |
| MsG0280007761.01 | MsG0880042929.01 | 0.872017 | 4.392794e-67 | 1.809104e-63 |
| MsG0280007761.01 | MsG0880043297.01 | 0.811132 | 8.157255e-51 | 5.008857e-48 |
| MsG0280007761.01 | MsG0880043299.01 | 0.809071 | 2.268529e-50 | 1.318919e-47 |
| MsG0280007761.01 | MsG0880043516.01 | 0.856670 | 2.750114e-62 | 6.613498e-59 |
| MsG0280007761.01 | MsG0880044340.01 | 0.844920 | 5.607973e-59 | 9.192130e-56 |
| MsG0280007761.01 | MsG0880045552.01 | 0.807154 | 5.804682e-50 | 3.209335e-47 |
| MsG0280007761.01 | MsG0880045916.01 | 0.862063 | 6.605842e-64 | 1.909173e-60 |
| MsG0280007761.01 | MsG0880046165.01 | 0.883278 | 5.134791e-71 | 3.233873e-67 |
| MsG0280007761.01 | MsG0880046431.01 | 0.818782 | 1.637927e-52 | 1.237764e-49 |
| MsG0280007761.01 | MsG0880046885.01 | 0.826641 | 2.426764e-54 | 2.289058e-51 |
| MsG0280007761.01 | MsG0880047223.01 | 0.857965 | 1.139162e-62 | 2.861797e-59 |
| MsG0280007761.01 | MsG0880047226.01 | 0.870565 | 1.325310e-66 | 5.179307e-63 |
| MsG0280007761.01 | MsG0880047431.01 | 0.827853 | 1.243388e-54 | 1.215010e-51 |
| MsG0280007761.01 | MsG0880047466.01 | 0.816171 | 6.343639e-52 | 4.462429e-49 |
| MsG0280007761.01 | MsG0880047478.01 | 0.805324 | 1.410669e-49 | 7.441225e-47 |
| MsG0280007761.01 | MsG0880047666.01 | 0.800301 | 1.537084e-48 | 7.132560e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007761.01.T02 | MTR_2g031610 | 96.581 | 468 | 16 | 0 | 1 | 468 | 1 | 468 | 0.0 | 804 |
| MsG0280007761.01.T02 | MTR_8g095360 | 50.000 | 394 | 182 | 6 | 81 | 467 | 116 | 501 | 4.75e-131 | 389 |
| MsG0280007761.01.T02 | MTR_3g097350 | 50.674 | 371 | 170 | 7 | 88 | 452 | 193 | 556 | 3.82e-126 | 379 |
| MsG0280007761.01.T02 | MTR_1g069915 | 44.444 | 405 | 198 | 5 | 64 | 468 | 91 | 468 | 1.69e-123 | 368 |
| MsG0280007761.01.T02 | MTR_4g033435 | 49.086 | 383 | 183 | 7 | 88 | 463 | 213 | 590 | 2.13e-122 | 369 |
| MsG0280007761.01.T02 | MTR_4g013300 | 49.708 | 342 | 162 | 5 | 124 | 461 | 107 | 442 | 1.32e-118 | 355 |
| MsG0280007761.01.T02 | MTR_7g070480 | 42.757 | 428 | 192 | 8 | 47 | 468 | 46 | 426 | 1.87e-113 | 341 |
| MsG0280007761.01.T02 | MTR_4g033435 | 50.980 | 255 | 116 | 4 | 88 | 336 | 213 | 464 | 4.84e-81 | 259 |
| MsG0280007761.01.T02 | MTR_3g098530 | 29.048 | 210 | 133 | 6 | 142 | 349 | 67 | 262 | 4.14e-19 | 87.4 |
| MsG0280007761.01.T02 | MTR_8g096170 | 29.524 | 210 | 132 | 8 | 142 | 349 | 50 | 245 | 4.08e-17 | 81.3 |
| MsG0280007761.01.T02 | MTR_8g096180 | 29.524 | 210 | 132 | 8 | 142 | 349 | 47 | 242 | 4.05e-16 | 78.6 |
| MsG0280007761.01.T02 | MTR_8g096180 | 28.311 | 219 | 133 | 9 | 142 | 349 | 47 | 252 | 3.59e-14 | 72.8 |
| MsG0280007761.01.T02 | MTR_4g070790 | 28.634 | 227 | 147 | 8 | 132 | 349 | 74 | 294 | 4.70e-13 | 70.9 |
| MsG0280007761.01.T02 | MTR_2g021080 | 71.429 | 49 | 13 | 1 | 306 | 353 | 1 | 49 | 1.21e-12 | 65.9 |
| MsG0280007761.01.T01 | MTR_2g031610 | 96.581 | 468 | 16 | 0 | 1 | 468 | 1 | 468 | 0.0 | 804 |
| MsG0280007761.01.T01 | MTR_8g095360 | 50.000 | 394 | 182 | 6 | 81 | 467 | 116 | 501 | 4.75e-131 | 389 |
| MsG0280007761.01.T01 | MTR_3g097350 | 50.674 | 371 | 170 | 7 | 88 | 452 | 193 | 556 | 3.82e-126 | 379 |
| MsG0280007761.01.T01 | MTR_1g069915 | 44.444 | 405 | 198 | 5 | 64 | 468 | 91 | 468 | 1.69e-123 | 368 |
| MsG0280007761.01.T01 | MTR_4g033435 | 49.086 | 383 | 183 | 7 | 88 | 463 | 213 | 590 | 2.13e-122 | 369 |
| MsG0280007761.01.T01 | MTR_4g013300 | 49.708 | 342 | 162 | 5 | 124 | 461 | 107 | 442 | 1.32e-118 | 355 |
| MsG0280007761.01.T01 | MTR_7g070480 | 42.757 | 428 | 192 | 8 | 47 | 468 | 46 | 426 | 1.87e-113 | 341 |
| MsG0280007761.01.T01 | MTR_4g033435 | 50.980 | 255 | 116 | 4 | 88 | 336 | 213 | 464 | 4.84e-81 | 259 |
| MsG0280007761.01.T01 | MTR_3g098530 | 29.048 | 210 | 133 | 6 | 142 | 349 | 67 | 262 | 4.14e-19 | 87.4 |
| MsG0280007761.01.T01 | MTR_8g096170 | 29.524 | 210 | 132 | 8 | 142 | 349 | 50 | 245 | 4.08e-17 | 81.3 |
| MsG0280007761.01.T01 | MTR_8g096180 | 29.524 | 210 | 132 | 8 | 142 | 349 | 47 | 242 | 4.05e-16 | 78.6 |
| MsG0280007761.01.T01 | MTR_8g096180 | 28.311 | 219 | 133 | 9 | 142 | 349 | 47 | 252 | 3.59e-14 | 72.8 |
| MsG0280007761.01.T01 | MTR_4g070790 | 28.634 | 227 | 147 | 8 | 132 | 349 | 74 | 294 | 4.70e-13 | 70.9 |
| MsG0280007761.01.T01 | MTR_2g021080 | 71.429 | 49 | 13 | 1 | 306 | 353 | 1 | 49 | 1.21e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007761.01.T02 | AT1G30690 | 68.129 | 342 | 102 | 3 | 122 | 463 | 200 | 534 | 9.61e-176 | 504 |
| MsG0280007761.01.T02 | AT1G30690 | 46.226 | 106 | 50 | 2 | 1 | 100 | 1 | 105 | 5.06e-13 | 71.6 |
| MsG0280007761.01.T02 | AT1G30690 | 68.129 | 342 | 102 | 3 | 122 | 463 | 200 | 534 | 9.61e-176 | 504 |
| MsG0280007761.01.T02 | AT1G30690 | 46.226 | 106 | 50 | 2 | 1 | 100 | 1 | 105 | 5.06e-13 | 71.6 |
| MsG0280007761.01.T02 | AT1G72160 | 45.676 | 451 | 202 | 7 | 14 | 461 | 75 | 485 | 3.65e-127 | 378 |
| MsG0280007761.01.T02 | AT4G09160 | 42.956 | 433 | 196 | 7 | 34 | 462 | 251 | 636 | 1.65e-118 | 361 |
| MsG0280007761.01.T02 | AT4G09160 | 42.956 | 433 | 196 | 7 | 34 | 462 | 276 | 661 | 1.99e-118 | 362 |
| MsG0280007761.01.T02 | AT4G09160 | 42.956 | 433 | 196 | 7 | 34 | 462 | 251 | 636 | 2.43e-118 | 360 |
| MsG0280007761.01.T02 | AT3G51670 | 48.098 | 368 | 175 | 7 | 109 | 466 | 44 | 405 | 1.25e-115 | 346 |
| MsG0280007761.01.T02 | AT1G22530 | 43.570 | 381 | 194 | 9 | 87 | 464 | 286 | 648 | 9.83e-96 | 302 |
| MsG0280007761.01.T02 | AT1G22530 | 43.570 | 381 | 194 | 9 | 87 | 464 | 320 | 682 | 1.35e-95 | 303 |
| MsG0280007761.01.T02 | AT1G72150 | 42.857 | 343 | 180 | 8 | 126 | 464 | 243 | 573 | 1.48e-86 | 276 |
| MsG0280007761.01.T02 | AT1G01630 | 27.143 | 210 | 137 | 7 | 142 | 349 | 50 | 245 | 3.83e-14 | 72.8 |
| MsG0280007761.01.T02 | AT4G08690 | 27.820 | 266 | 158 | 10 | 108 | 362 | 14 | 256 | 6.00e-13 | 69.7 |
| MsG0280007761.01.T02 | AT4G08690 | 27.820 | 266 | 158 | 10 | 108 | 362 | 14 | 256 | 6.00e-13 | 69.7 |
| MsG0280007761.01.T02 | AT4G08690 | 27.820 | 266 | 158 | 10 | 108 | 362 | 14 | 256 | 6.00e-13 | 69.7 |
| MsG0280007761.01.T02 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 3.72e-11 | 65.9 |
| MsG0280007761.01.T02 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 3.72e-11 | 65.9 |
| MsG0280007761.01.T02 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 4.06e-11 | 65.5 |
| MsG0280007761.01.T02 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 4.06e-11 | 65.5 |
| MsG0280007761.01.T02 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 4.06e-11 | 65.5 |
| MsG0280007761.01.T02 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 4.06e-11 | 65.5 |
| MsG0280007761.01.T02 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.50e-11 | 65.1 |
| MsG0280007761.01.T02 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.50e-11 | 65.1 |
| MsG0280007761.01.T02 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.50e-11 | 65.1 |
| MsG0280007761.01.T02 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.50e-11 | 65.1 |
| MsG0280007761.01.T02 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.51e-11 | 65.1 |
| MsG0280007761.01.T02 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.51e-11 | 65.1 |
| MsG0280007761.01.T02 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.51e-11 | 65.1 |
| MsG0280007761.01.T01 | AT1G30690 | 68.129 | 342 | 102 | 3 | 122 | 463 | 200 | 534 | 9.61e-176 | 504 |
| MsG0280007761.01.T01 | AT1G30690 | 46.226 | 106 | 50 | 2 | 1 | 100 | 1 | 105 | 5.06e-13 | 71.6 |
| MsG0280007761.01.T01 | AT1G30690 | 68.129 | 342 | 102 | 3 | 122 | 463 | 200 | 534 | 9.61e-176 | 504 |
| MsG0280007761.01.T01 | AT1G30690 | 46.226 | 106 | 50 | 2 | 1 | 100 | 1 | 105 | 5.06e-13 | 71.6 |
| MsG0280007761.01.T01 | AT1G72160 | 45.676 | 451 | 202 | 7 | 14 | 461 | 75 | 485 | 3.65e-127 | 378 |
| MsG0280007761.01.T01 | AT4G09160 | 42.956 | 433 | 196 | 7 | 34 | 462 | 251 | 636 | 1.65e-118 | 361 |
| MsG0280007761.01.T01 | AT4G09160 | 42.956 | 433 | 196 | 7 | 34 | 462 | 276 | 661 | 1.99e-118 | 362 |
| MsG0280007761.01.T01 | AT4G09160 | 42.956 | 433 | 196 | 7 | 34 | 462 | 251 | 636 | 2.43e-118 | 360 |
| MsG0280007761.01.T01 | AT3G51670 | 48.098 | 368 | 175 | 7 | 109 | 466 | 44 | 405 | 1.25e-115 | 346 |
| MsG0280007761.01.T01 | AT1G22530 | 43.570 | 381 | 194 | 9 | 87 | 464 | 286 | 648 | 9.83e-96 | 302 |
| MsG0280007761.01.T01 | AT1G22530 | 43.570 | 381 | 194 | 9 | 87 | 464 | 320 | 682 | 1.35e-95 | 303 |
| MsG0280007761.01.T01 | AT1G72150 | 42.857 | 343 | 180 | 8 | 126 | 464 | 243 | 573 | 1.48e-86 | 276 |
| MsG0280007761.01.T01 | AT1G01630 | 27.143 | 210 | 137 | 7 | 142 | 349 | 50 | 245 | 3.83e-14 | 72.8 |
| MsG0280007761.01.T01 | AT4G08690 | 27.820 | 266 | 158 | 10 | 108 | 362 | 14 | 256 | 6.00e-13 | 69.7 |
| MsG0280007761.01.T01 | AT4G08690 | 27.820 | 266 | 158 | 10 | 108 | 362 | 14 | 256 | 6.00e-13 | 69.7 |
| MsG0280007761.01.T01 | AT4G08690 | 27.820 | 266 | 158 | 10 | 108 | 362 | 14 | 256 | 6.00e-13 | 69.7 |
| MsG0280007761.01.T01 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 3.72e-11 | 65.9 |
| MsG0280007761.01.T01 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 3.72e-11 | 65.9 |
| MsG0280007761.01.T01 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 4.06e-11 | 65.5 |
| MsG0280007761.01.T01 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 4.06e-11 | 65.5 |
| MsG0280007761.01.T01 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 4.06e-11 | 65.5 |
| MsG0280007761.01.T01 | AT2G21540 | 27.468 | 233 | 142 | 9 | 132 | 349 | 85 | 305 | 4.06e-11 | 65.5 |
| MsG0280007761.01.T01 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.50e-11 | 65.1 |
| MsG0280007761.01.T01 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.50e-11 | 65.1 |
| MsG0280007761.01.T01 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.50e-11 | 65.1 |
| MsG0280007761.01.T01 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.50e-11 | 65.1 |
| MsG0280007761.01.T01 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.51e-11 | 65.1 |
| MsG0280007761.01.T01 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.51e-11 | 65.1 |
| MsG0280007761.01.T01 | AT3G24840 | 27.240 | 279 | 169 | 12 | 92 | 349 | 48 | 313 | 6.51e-11 | 65.1 |
Find 56 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCATCGCTTTAAATTTC+TGG | 0.029380 | 2:-20206595 | MsG0280007761.01.T02:five_prime_UTR |
| TTTGAGGGCTAGAGAGTTTA+AGG | 0.103122 | 2:-20206060 | MsG0280007761.01.T02:CDS |
| CAACAACAACCTCGACTTTC+TGG | 0.110067 | 2:+20206471 | None:intergenic |
| GAGATTTATCAAAAGACTTT+TGG | 0.213282 | 2:-20205861 | MsG0280007761.01.T02:CDS |
| TGAGAAATGTTCATCTTATA+AGG | 0.250454 | 2:-20206375 | MsG0280007761.01.T02:CDS |
| CATTTCTCAACTGTCTTTGC+AGG | 0.251535 | 2:+20206389 | None:intergenic |
| GATGAAGATTGATTCTGTTT+TGG | 0.277371 | 2:-20205988 | MsG0280007761.01.T02:CDS |
| TCTCAAAGAGTTCGAGAAAA+AGG | 0.293241 | 2:-20206330 | MsG0280007761.01.T02:CDS |
| ATTCTAAGTTCTTTCTTAGA+AGG | 0.296487 | 2:+20205705 | None:intergenic |
| CTGGGCTTCTTCTTGAACCA+TGG | 0.354769 | 2:+20206490 | None:intergenic |
| TCTCATCGCTTTAAATTTCT+GGG | 0.369260 | 2:-20206594 | MsG0280007761.01.T02:five_prime_UTR |
| AACAACAACCTCGACTTTCT+GGG | 0.376294 | 2:+20206472 | None:intergenic |
| GGTTGAAGAGGTTGAGGAAA+AGG | 0.389487 | 2:-20206156 | MsG0280007761.01.T02:CDS |
| AAGGACCAGGTGAATTCTTA+AGG | 0.391707 | 2:+20205724 | None:intergenic |
| GAGATGGAGGTGTTCTGTTA+TGG | 0.393723 | 2:-20205811 | MsG0280007761.01.T02:CDS |
| TGAAGGAAGAAGAAGAGAAA+AGG | 0.407319 | 2:-20206178 | MsG0280007761.01.T02:CDS |
| GAAGGAAGAAGAAGAGAAAA+GGG | 0.413453 | 2:-20206177 | MsG0280007761.01.T02:CDS |
| ACTCCTTCATTTCCTTTGCT+TGG | 0.417448 | 2:+20206104 | None:intergenic |
| GTTGAAGCTTTGAAAGAAGA+AGG | 0.427026 | 2:-20206224 | MsG0280007761.01.T02:CDS |
| GCAAACTGTTACAATGTTGC+AGG | 0.436211 | 2:-20205673 | MsG0280007761.01.T02:CDS |
| AAAGGAAGAAGAGACCAAAA+AGG | 0.439180 | 2:-20206246 | MsG0280007761.01.T02:CDS |
| GAAAAGGGTTGAAGAGGTTG+AGG | 0.440546 | 2:-20206162 | MsG0280007761.01.T02:CDS |
| AACATCTATAGTGTGTTTGA+TGG | 0.447007 | 2:-20205888 | MsG0280007761.01.T02:CDS |
| GCAGGACAATTACCCTGAAT+TGG | 0.448528 | 2:-20205655 | MsG0280007761.01.T02:CDS |
| AACCATGACTGCTGAAACCA+TGG | 0.458966 | 2:-20206507 | MsG0280007761.01.T02:exon |
| GTCGAGGTTGTTGTTGAAGA+AGG | 0.464142 | 2:-20206464 | MsG0280007761.01.T02:CDS |
| GGAAAAGGATTTGTCTTTGT+GGG | 0.465070 | 2:-20206141 | MsG0280007761.01.T02:CDS |
| TGTTGAAGCAAAGGAATCAA+TGG | 0.472432 | 2:-20206423 | MsG0280007761.01.T02:CDS |
| AAAGAAGAAGGTGGTGAAGA+GGG | 0.474971 | 2:-20206212 | MsG0280007761.01.T02:CDS |
| AACCATGGTTTCAGCAGTCA+TGG | 0.478023 | 2:+20206505 | None:intergenic |
| TTCTCTCACACTTTCCTCAA+AGG | 0.486409 | 2:-20206634 | MsG0280007761.01.T02:five_prime_UTR |
| TGGGACTGAGGAGAAGAGAA+AGG | 0.489356 | 2:-20205841 | MsG0280007761.01.T02:CDS |
| TTGCCAAGCAAAGGAAATGA+AGG | 0.497177 | 2:-20206107 | MsG0280007761.01.T02:CDS |
| AGAAGAGAAAAGGGTTGAAG+AGG | 0.500355 | 2:-20206168 | MsG0280007761.01.T02:CDS |
| TTTGATTGAATTTAGATCAA+AGG | 0.509973 | 2:-20206306 | MsG0280007761.01.T02:CDS |
| AGGAAAAGGATTTGTCTTTG+TGG | 0.510582 | 2:-20206142 | MsG0280007761.01.T02:CDS |
| GCTTCTGCTGCTTATATGAA+CGG | 0.524197 | 2:-20205942 | MsG0280007761.01.T02:CDS |
| GAGAACAAGACATACCTTTG+AGG | 0.524295 | 2:+20206620 | None:intergenic |
| TGAAGAAAGTGTTGAAGCAA+AGG | 0.530342 | 2:-20206432 | MsG0280007761.01.T02:CDS |
| AGTTCTTTCTTAGAAGGACC+AGG | 0.548856 | 2:+20205711 | None:intergenic |
| GAAAGTGTGAGAGAAAATTG+AGG | 0.560804 | 2:+20206642 | None:intergenic |
| GGACAATTACCCTGAATTGG+TGG | 0.572018 | 2:-20205652 | MsG0280007761.01.T02:CDS |
| AGAGGGCGATAAAGTTGTGA+AGG | 0.577233 | 2:-20206195 | MsG0280007761.01.T02:CDS |
| CAGAAGCTGAATTTGAAACC+AGG | 0.580201 | 2:-20205777 | MsG0280007761.01.T02:CDS |
| AAAGACACTTAAATGGAGGA+AGG | 0.599488 | 2:-20206012 | MsG0280007761.01.T02:CDS |
| GAAAGAAGAAGGTGGTGAAG+AGG | 0.606913 | 2:-20206213 | MsG0280007761.01.T02:CDS |
| AGGAAATGAAGGAGTTGATG+TGG | 0.611522 | 2:-20206096 | MsG0280007761.01.T02:CDS |
| GAAAAGGATTTGTCTTTGTG+GGG | 0.634306 | 2:-20206140 | MsG0280007761.01.T02:CDS |
| AATGACCTTAAGAATTCACC+TGG | 0.635865 | 2:-20205729 | MsG0280007761.01.T02:CDS |
| CTATAGATGTTGTAACACAC+AGG | 0.639890 | 2:+20205900 | None:intergenic |
| AGCAAAGAAGAAACACCACC+TGG | 0.660485 | 2:+20205759 | None:intergenic |
| AGAAGAAGCCCAGAAAGTCG+AGG | 0.662246 | 2:-20206480 | MsG0280007761.01.T02:CDS |
| GAAGCTTTGAAAGAAGAAGG+TGG | 0.663635 | 2:-20206221 | MsG0280007761.01.T02:CDS |
| ATGAACGGTGTTGATCGCGA+AGG | 0.683407 | 2:-20205927 | MsG0280007761.01.T02:CDS |
| TATAGATGTTGTAACACACA+GGG | 0.704028 | 2:+20205901 | None:intergenic |
| AAGCTGAATTTGAAACCAGG+TGG | 0.704521 | 2:-20205774 | MsG0280007761.01.T02:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATACAATTAAAAAAGTAA+AGG | + | Chr2:20205037-20205056 | None:intergenic | 10.0% |
| !!! | ATTTTCTTATAATAGTATCA+GGG | + | Chr2:20205097-20205116 | None:intergenic | 15.0% |
| !! | CTGATACTATTATAAGAAAA+TGG | - | Chr2:20205096-20205115 | MsG0280007761.01.T02:CDS | 20.0% |
| !! | CTTCATAATTCAATTCTTTA+AGG | + | Chr2:20206484-20206503 | None:intergenic | 20.0% |
| !! | TCTTAAATCAAATGCAAAAT+TGG | - | Chr2:20206175-20206194 | MsG0280007761.01.T02:CDS | 20.0% |
| !! | TTAAATCGTTTAATCAAACA+TGG | - | Chr2:20206051-20206070 | MsG0280007761.01.T02:CDS | 20.0% |
| !! | TTTGATTGAATTTAGATCAA+AGG | - | Chr2:20204312-20204331 | MsG0280007761.01.T02:CDS | 20.0% |
| !!! | AGATTTATCAAAAGACTTTT+GGG | - | Chr2:20204758-20204777 | MsG0280007761.01.T02:intron | 20.0% |
| !!! | AGGTTTTTTTGTCTTTTAAT+AGG | - | Chr2:20206210-20206229 | MsG0280007761.01.T02:CDS | 20.0% |
| !!! | CATTTTCTTATAATAGTATC+AGG | + | Chr2:20205098-20205117 | None:intergenic | 20.0% |
| !!! | GAAATGATTAATTGATTTTG+AGG | + | Chr2:20205401-20205420 | None:intergenic | 20.0% |
| !!! | TGTCTCAAAATTTTCTTTTT+TGG | - | Chr2:20204049-20204068 | MsG0280007761.01.T02:three_prime_UTR | 20.0% |
| !!! | TTCATTTAGATTTTGAAAGT+AGG | - | Chr2:20206536-20206555 | MsG0280007761.01.T02:five_prime_UTR | 20.0% |
| !!! | TTTTTTGTCTTTTAATAGGT+TGG | - | Chr2:20206214-20206233 | MsG0280007761.01.T02:CDS | 20.0% |
| ! | AAAATTGGACACATTCTAAA+AGG | - | Chr2:20206190-20206209 | MsG0280007761.01.T02:CDS | 25.0% |
| ! | ACACAATCATTGTTCAAAAA+GGG | - | Chr2:20206320-20206339 | MsG0280007761.01.T02:CDS | 25.0% |
| ! | ATTCTAAGTTCTTTCTTAGA+AGG | + | Chr2:20204916-20204935 | None:intergenic | 25.0% |
| ! | ATTTACTTTCCATCTCAAAT+AGG | - | Chr2:20205455-20205474 | MsG0280007761.01.T02:intron | 25.0% |
| ! | CTTATACATAAGAACTGATA+TGG | - | Chr2:20206005-20206024 | MsG0280007761.01.T02:CDS | 25.0% |
| ! | TACACAATCATTGTTCAAAA+AGG | - | Chr2:20206319-20206338 | MsG0280007761.01.T02:CDS | 25.0% |
| ! | TGAGAAATGTTCATCTTATA+AGG | - | Chr2:20204243-20204262 | MsG0280007761.01.T02:CDS | 25.0% |
| ! | TGTTGAAAAAGACACTTAAA+TGG | - | Chr2:20204599-20204618 | MsG0280007761.01.T02:intron | 25.0% |
| !! | GAAAAAGAGACTTACATTTT+TGG | + | Chr2:20204992-20205011 | None:intergenic | 25.0% |
| !! | GAGATTTATCAAAAGACTTT+TGG | - | Chr2:20204757-20204776 | MsG0280007761.01.T02:intron | 25.0% |
| !! | TTCTTCCTTTTTCTCAAAAA+GGG | + | Chr2:20204362-20204381 | None:intergenic | 25.0% |
| !! | TTTGAGATGGAAAGTAAATA+AGG | + | Chr2:20205454-20205473 | None:intergenic | 25.0% |
| !! | TTTGTTCTTTGAGTTAAGAA+TGG | + | Chr2:20205321-20205340 | None:intergenic | 25.0% |
| !!! | AGAGTTTTGAAGACTAAAAA+AGG | - | Chr2:20206575-20206594 | MsG0280007761.01.T02:five_prime_UTR | 25.0% |
| !!! | ATTTAGATTTTGAAAGTAGG+TGG | - | Chr2:20206539-20206558 | MsG0280007761.01.T02:five_prime_UTR | 25.0% |
| AAATAGGTACATTCCAATTG+AGG | - | Chr2:20205471-20205490 | MsG0280007761.01.T02:intron | 30.0% | |
| AACATCTATAGTGTGTTTGA+TGG | - | Chr2:20204730-20204749 | MsG0280007761.01.T02:intron | 30.0% | |
| AAGAACAAAGAGCAAATTTG+TGG | - | Chr2:20205332-20205351 | MsG0280007761.01.T02:CDS | 30.0% | |
| ACACATCAAACAAAAAGAAG+AGG | - | Chr2:20206425-20206444 | MsG0280007761.01.T02:CDS | 30.0% | |
| ACTTTCAAGAACAATGAACT+TGG | - | Chr2:20206379-20206398 | MsG0280007761.01.T02:CDS | 30.0% | |
| ATAGTAGCTGTGAGATTATT+TGG | - | Chr2:20205892-20205911 | MsG0280007761.01.T02:CDS | 30.0% | |
| ATGAAACCAAATACACACAA+TGG | + | Chr2:20206521-20206540 | None:intergenic | 30.0% | |
| ATTGTTACTAACTCTTGTGT+TGG | - | Chr2:20205126-20205145 | MsG0280007761.01.T02:CDS | 30.0% | |
| CACATCAAACAAAAAGAAGA+GGG | - | Chr2:20206426-20206445 | MsG0280007761.01.T02:CDS | 30.0% | |
| CTTTCAAGAACAATGAACTT+GGG | - | Chr2:20206380-20206399 | MsG0280007761.01.T02:CDS | 30.0% | |
| TAGTAGCTGTGAGATTATTT+GGG | - | Chr2:20205893-20205912 | MsG0280007761.01.T02:CDS | 30.0% | |
| TATAGATGTTGTAACACACA+GGG | + | Chr2:20204720-20204739 | None:intergenic | 30.0% | |
| TATGGTGTGAATTCTTAACA+TGG | - | Chr2:20206023-20206042 | MsG0280007761.01.T02:CDS | 30.0% | |
| TGAAAAAGACACTTAAATGG+AGG | - | Chr2:20204602-20204621 | MsG0280007761.01.T02:intron | 30.0% | |
| TTTGTTCCATTGTGTGTATT+TGG | - | Chr2:20206512-20206531 | MsG0280007761.01.T02:exon | 30.0% | |
| ! | CTTCTTCCTTTTTCTCAAAA+AGG | + | Chr2:20204363-20204382 | None:intergenic | 30.0% |
| ! | GCATTTGATTTAAGAAGAAC+TGG | + | Chr2:20206170-20206189 | None:intergenic | 30.0% |
| ! | TCTCATCGCTTTAAATTTCT+GGG | - | Chr2:20204024-20204043 | MsG0280007761.01.T02:three_prime_UTR | 30.0% |
| ! | TTCTCATCGCTTTAAATTTC+TGG | - | Chr2:20204023-20204042 | MsG0280007761.01.T02:three_prime_UTR | 30.0% |
| ! | TTTCAAAGCTTCAACCTTTT+TGG | + | Chr2:20204389-20204408 | None:intergenic | 30.0% |
| ! | TTTTCATCAATGTTCCTTTC+TGG | - | Chr2:20205268-20205287 | MsG0280007761.01.T02:CDS | 30.0% |
| !! | GATGAAGATTGATTCTGTTT+TGG | - | Chr2:20204630-20204649 | MsG0280007761.01.T02:intron | 30.0% |
| !! | TTCTTGAAAGTGTTCCTAAT+AGG | + | Chr2:20206370-20206389 | None:intergenic | 30.0% |
| !!! | GGAAGATTTTGATTCTGATT+TGG | - | Chr2:20204654-20204673 | MsG0280007761.01.T02:intron | 30.0% |
| !!! | GGTTTTGTTGAAGTTTTTGA+GGG | - | Chr2:20204543-20204562 | MsG0280007761.01.T02:intron | 30.0% |
| !!! | TGGTTTTGTTGAAGTTTTTG+AGG | - | Chr2:20204542-20204561 | MsG0280007761.01.T02:intron | 30.0% |
| AAAGACACTTAAATGGAGGA+AGG | - | Chr2:20204606-20204625 | MsG0280007761.01.T02:intron | 35.0% | |
| AAAGGAAGAAGAGACCAAAA+AGG | - | Chr2:20204372-20204391 | MsG0280007761.01.T02:CDS | 35.0% | |
| AACGTGACATTACGAGTTAA+AGG | + | Chr2:20205189-20205208 | None:intergenic | 35.0% | |
| AACTATAGAGATTCCTGCAT+TGG | - | Chr2:20205597-20205616 | MsG0280007761.01.T02:intron | 35.0% | |
| AAGAAGATAGGTTCACAAGA+AGG | - | Chr2:20206343-20206362 | MsG0280007761.01.T02:CDS | 35.0% | |
| AATGACCTTAAGAATTCACC+TGG | - | Chr2:20204889-20204908 | MsG0280007761.01.T02:intron | 35.0% | |
| AGATGAGATAGATACATCAC+TGG | + | Chr2:20206644-20206663 | None:intergenic | 35.0% | |
| AGGAAAAGGATTTGTCTTTG+TGG | - | Chr2:20204476-20204495 | MsG0280007761.01.T02:intron | 35.0% | |
| AGGAATATGTAGTGCATGTT+AGG | - | Chr2:20205673-20205692 | MsG0280007761.01.T02:CDS | 35.0% | |
| CATGGTGTGAATTCTTAACT+TGG | - | Chr2:20206069-20206088 | MsG0280007761.01.T02:CDS | 35.0% | |
| CTATAGATGTTGTAACACAC+AGG | + | Chr2:20204721-20204740 | None:intergenic | 35.0% | |
| GAAAAGGATTTGTCTTTGTG+GGG | - | Chr2:20204478-20204497 | MsG0280007761.01.T02:intron | 35.0% | |
| GAAGGAAGAAGAAGAGAAAA+GGG | - | Chr2:20204441-20204460 | MsG0280007761.01.T02:intron | 35.0% | |
| GAGAATGATTCTGAGTTCTT+TGG | - | Chr2:20205526-20205545 | MsG0280007761.01.T02:intron | 35.0% | |
| GGAAAAGGATTTGTCTTTGT+GGG | - | Chr2:20204477-20204496 | MsG0280007761.01.T02:intron | 35.0% | |
| GGTGTTCTGTTATGGAAAAA+TGG | - | Chr2:20204815-20204834 | MsG0280007761.01.T02:intron | 35.0% | |
| GTTCAAAAAGGGAAGAAGAT+AGG | - | Chr2:20206331-20206350 | MsG0280007761.01.T02:CDS | 35.0% | |
| TAACTATGGTGGTTTCAAGA+GGG | - | Chr2:20205504-20205523 | MsG0280007761.01.T02:intron | 35.0% | |
| TCTACTCTATAGTCTGCTTT+AGG | - | Chr2:20205653-20205672 | MsG0280007761.01.T02:CDS | 35.0% | |
| TCTCAAAGAGTTCGAGAAAA+AGG | - | Chr2:20204288-20204307 | MsG0280007761.01.T02:CDS | 35.0% | |
| TGAAACCACCATAGTTAACA+GGG | + | Chr2:20205501-20205520 | None:intergenic | 35.0% | |
| TGAAGGAAGAAGAAGAGAAA+AGG | - | Chr2:20204440-20204459 | MsG0280007761.01.T02:intron | 35.0% | |
| TGGAATGTACCTATTTGAGA+TGG | + | Chr2:20205467-20205486 | None:intergenic | 35.0% | |
| TGTTGAAGCAAAGGAATCAA+TGG | - | Chr2:20204195-20204214 | MsG0280007761.01.T02:CDS | 35.0% | |
| TGTTTCAGAACTCATTCTCA+AGG | - | Chr2:20205561-20205580 | MsG0280007761.01.T02:intron | 35.0% | |
| TTAACTATGGTGGTTTCAAG+AGG | - | Chr2:20205503-20205522 | MsG0280007761.01.T02:intron | 35.0% | |
| TTGAAACCACCATAGTTAAC+AGG | + | Chr2:20205502-20205521 | None:intergenic | 35.0% | |
| TTTAACTCGTAATGTCACGT+TGG | - | Chr2:20205188-20205207 | MsG0280007761.01.T02:intron | 35.0% | |
| ! | AAGGTTGAAGAAGCAGTTTT+AGG | - | Chr2:20204331-20204350 | MsG0280007761.01.T02:CDS | 35.0% |
| ! | AGGTTGAAGAAGCAGTTTTA+GGG | - | Chr2:20204332-20204351 | MsG0280007761.01.T02:CDS | 35.0% |
| ! | GAAAGTGTGAGAGAAAATTG+AGG | + | Chr2:20203979-20203998 | None:intergenic | 35.0% |
| ! | GAATTTGTTCCCAATGATGA+GGG | - | Chr2:20206292-20206311 | MsG0280007761.01.T02:CDS | 35.0% |
| ! | TTACGAGTTAAAGGCATGTT+TGG | + | Chr2:20205180-20205199 | None:intergenic | 35.0% |
| !! | AGAGAAAGGAGTTTTTGAGA+TGG | - | Chr2:20204791-20204810 | MsG0280007761.01.T02:intron | 35.0% |
| !! | AGCTCTTGTTGTTCTTGTAA+CGG | + | Chr2:20206459-20206478 | None:intergenic | 35.0% |
| !! | GAACACCCTTTTTGAGAAAA+AGG | - | Chr2:20204354-20204373 | MsG0280007761.01.T02:CDS | 35.0% |
| !! | GAAGATTGATTCTGTTTTGG+AGG | - | Chr2:20204633-20204652 | MsG0280007761.01.T02:intron | 35.0% |
| !! | GTTGAAGCTTTGAAAGAAGA+AGG | - | Chr2:20204394-20204413 | MsG0280007761.01.T02:intron | 35.0% |
| !! | TGAAGAAAGTGTTGAAGCAA+AGG | - | Chr2:20204186-20204205 | MsG0280007761.01.T02:CDS | 35.0% |
| AAAGAAGAAGGTGGTGAAGA+GGG | - | Chr2:20204406-20204425 | MsG0280007761.01.T02:intron | 40.0% | |
| AACAACAACCTCGACTTTCT+GGG | + | Chr2:20204149-20204168 | None:intergenic | 40.0% | |
| AAGGACCAGGTGAATTCTTA+AGG | + | Chr2:20204897-20204916 | None:intergenic | 40.0% | |
| ACTCCTTCATTTCCTTTGCT+TGG | + | Chr2:20204517-20204536 | None:intergenic | 40.0% | |
| AGAAGAGAAAAGGGTTGAAG+AGG | - | Chr2:20204450-20204469 | MsG0280007761.01.T02:intron | 40.0% | |
| AGTTCTTTCTTAGAAGGACC+AGG | + | Chr2:20204910-20204929 | None:intergenic | 40.0% | |
| CAAGAACAATGAACTTGGGA+AGG | - | Chr2:20206384-20206403 | MsG0280007761.01.T02:CDS | 40.0% | |
| CATTTCTCAACTGTCTTTGC+AGG | + | Chr2:20204232-20204251 | None:intergenic | 40.0% | |
| CTTGTAGAGCTCATGCATAA+AGG | + | Chr2:20205936-20205955 | None:intergenic | 40.0% | |
| GAGAACAAGACATACCTTTG+AGG | + | Chr2:20204001-20204020 | None:intergenic | 40.0% | |
| GCAAACTGTTACAATGTTGC+AGG | - | Chr2:20204945-20204964 | MsG0280007761.01.T02:intron | 40.0% | |
| GTTCACAAGAAGGACCTATT+AGG | - | Chr2:20206353-20206372 | MsG0280007761.01.T02:CDS | 40.0% | |
| TATAGAGATTCCTGCATTGG+AGG | - | Chr2:20205600-20205619 | MsG0280007761.01.T02:intron | 40.0% | |
| TTAACAGGGATCTCCTCAAT+TGG | + | Chr2:20205487-20205506 | None:intergenic | 40.0% | |
| TTCTCTCACACTTTCCTCAA+AGG | - | Chr2:20203984-20204003 | MsG0280007761.01.T02:three_prime_UTR | 40.0% | |
| TTGCCAAGCAAAGGAAATGA+AGG | - | Chr2:20204511-20204530 | MsG0280007761.01.T02:intron | 40.0% | |
| TTTGAGAAAGACTCTGAGCT+AGG | - | Chr2:20205801-20205820 | MsG0280007761.01.T02:CDS | 40.0% | |
| TTTGAGGGCTAGAGAGTTTA+AGG | - | Chr2:20204558-20204577 | MsG0280007761.01.T02:intron | 40.0% | |
| ! | AAGCTGAATTTGAAACCAGG+TGG | - | Chr2:20204844-20204863 | MsG0280007761.01.T02:intron | 40.0% |
| ! | CAGAAGCTGAATTTGAAACC+AGG | - | Chr2:20204841-20204860 | MsG0280007761.01.T02:intron | 40.0% |
| ! | GCTTCTGCTGCTTATATGAA+CGG | - | Chr2:20204676-20204695 | MsG0280007761.01.T02:intron | 40.0% |
| ! | GGAATTTGTTCCCAATGATG+AGG | - | Chr2:20206291-20206310 | MsG0280007761.01.T02:CDS | 40.0% |
| ! | GTAATGTCACGTTGGTAGAT+AGG | - | Chr2:20205196-20205215 | MsG0280007761.01.T02:intron | 40.0% |
| ! | GTAGTTTTTACCTCCAATGC+AGG | + | Chr2:20205613-20205632 | None:intergenic | 40.0% |
| ! | TTGAGAGCATAGTACCAGAA+AGG | + | Chr2:20205285-20205304 | None:intergenic | 40.0% |
| ! | TTTTGGACAAGTGCATGTGA+GGG | - | Chr2:20205832-20205851 | MsG0280007761.01.T02:CDS | 40.0% |
| !! | AGGAAATGAAGGAGTTGATG+TGG | - | Chr2:20204522-20204541 | MsG0280007761.01.T02:intron | 40.0% |
| !! | GAAGCTTTGAAAGAAGAAGG+TGG | - | Chr2:20204397-20204416 | MsG0280007761.01.T02:intron | 40.0% |
| !! | GTTCTGAAACAGAAGCATCT+TGG | + | Chr2:20205552-20205571 | None:intergenic | 40.0% |
| !!! | ACATTTTTGGCCACCAATTC+AGG | + | Chr2:20204979-20204998 | None:intergenic | 40.0% |
| !!! | CATTTTTGGCCACCAATTCA+GGG | + | Chr2:20204978-20204997 | None:intergenic | 40.0% |
| !!! | GAAAGGAGTTTTTGAGATGG+AGG | - | Chr2:20204794-20204813 | MsG0280007761.01.T02:intron | 40.0% |
| !!! | TCAAAAGACTTTTGGGACTG+AGG | - | Chr2:20204765-20204784 | MsG0280007761.01.T02:intron | 40.0% |
| AAACACTTTGTGCTGGGACT+TGG | - | Chr2:20206237-20206256 | MsG0280007761.01.T02:CDS | 45.0% | |
| AACCATGACTGCTGAAACCA+TGG | - | Chr2:20204111-20204130 | MsG0280007761.01.T02:three_prime_UTR | 45.0% | |
| AACCATGGTTTCAGCAGTCA+TGG | + | Chr2:20204116-20204135 | None:intergenic | 45.0% | |
| AGAGGGCGATAAAGTTGTGA+AGG | - | Chr2:20204423-20204442 | MsG0280007761.01.T02:intron | 45.0% | |
| AGCAAAGAAGAAACACCACC+TGG | + | Chr2:20204862-20204881 | None:intergenic | 45.0% | |
| AGGTTGGAAACACTTTGTGC+TGG | - | Chr2:20206230-20206249 | MsG0280007761.01.T02:CDS | 45.0% | |
| AGTGTTTCAGTGACCTTAGC+AGG | + | Chr2:20205366-20205385 | None:intergenic | 45.0% | |
| CAACAACAACCTCGACTTTC+TGG | + | Chr2:20204150-20204169 | None:intergenic | 45.0% | |
| GAAAAGGGTTGAAGAGGTTG+AGG | - | Chr2:20204456-20204475 | MsG0280007761.01.T02:intron | 45.0% | |
| GAAAGAAGAAGGTGGTGAAG+AGG | - | Chr2:20204405-20204424 | MsG0280007761.01.T02:intron | 45.0% | |
| GAGATCCCTGTTAACTATGG+TGG | - | Chr2:20205493-20205512 | MsG0280007761.01.T02:intron | 45.0% | |
| GAGGAGATCCCTGTTAACTA+TGG | - | Chr2:20205490-20205509 | MsG0280007761.01.T02:intron | 45.0% | |
| GCAGGACAATTACCCTGAAT+TGG | - | Chr2:20204963-20204982 | MsG0280007761.01.T02:intron | 45.0% | |
| GGACAATTACCCTGAATTGG+TGG | - | Chr2:20204966-20204985 | MsG0280007761.01.T02:intron | 45.0% | |
| GGTTGAAGAGGTTGAGGAAA+AGG | - | Chr2:20204462-20204481 | MsG0280007761.01.T02:intron | 45.0% | |
| GGTTGGAAACACTTTGTGCT+GGG | - | Chr2:20206231-20206250 | MsG0280007761.01.T02:CDS | 45.0% | |
| GTGTATGAGCCCTCATCATT+GGG | + | Chr2:20206304-20206323 | None:intergenic | 45.0% | |
| TCAGAACTCATTCTCAAGGC+TGG | - | Chr2:20205565-20205584 | MsG0280007761.01.T02:intron | 45.0% | |
| TGTGTATGAGCCCTCATCAT+TGG | + | Chr2:20206305-20206324 | None:intergenic | 45.0% | |
| TTGGGAGGTAAGTTACAAGG+AGG | - | Chr2:20206270-20206289 | MsG0280007761.01.T02:CDS | 45.0% | |
| ! | CTAACTCTTGTGTTGGTGTC+AGG | - | Chr2:20205133-20205152 | MsG0280007761.01.T02:CDS | 45.0% |
| ! | GTCGAGGTTGTTGTTGAAGA+AGG | - | Chr2:20204154-20204173 | MsG0280007761.01.T02:CDS | 45.0% |
| !! | GAGATGGAGGTGTTCTGTTA+TGG | - | Chr2:20204807-20204826 | MsG0280007761.01.T02:intron | 45.0% |
| !! | GTTTTGGACAAGTGCATGTG+AGG | - | Chr2:20205831-20205850 | MsG0280007761.01.T02:CDS | 45.0% |
| !!! | GTGTCACTTTTGCCAAGCAA+AGG | - | Chr2:20204502-20204521 | MsG0280007761.01.T02:intron | 45.0% |
| !!! | TGAGCTAGGCTGGTTTGTTT+TGG | - | Chr2:20205815-20205834 | MsG0280007761.01.T02:CDS | 45.0% |
| AGAAAGACTCTGAGCTAGGC+TGG | - | Chr2:20205805-20205824 | MsG0280007761.01.T02:CDS | 50.0% | |
| AGAAGAAGCCCAGAAAGTCG+AGG | - | Chr2:20204138-20204157 | MsG0280007761.01.T02:intron | 50.0% | |
| CTGGGCTTCTTCTTGAACCA+TGG | + | Chr2:20204131-20204150 | None:intergenic | 50.0% | |
| GGGTTGGGAGGTAAGTTACA+AGG | - | Chr2:20206267-20206286 | MsG0280007761.01.T02:CDS | 50.0% | |
| TGGGACTGAGGAGAAGAGAA+AGG | - | Chr2:20204777-20204796 | MsG0280007761.01.T02:intron | 50.0% | |
| !! | ATGAACGGTGTTGATCGCGA+AGG | - | Chr2:20204691-20204710 | MsG0280007761.01.T02:intron | 50.0% |
| !! | TGCTGGGACTTGGCTGTTTT+GGG | - | Chr2:20206247-20206266 | MsG0280007761.01.T02:CDS | 50.0% |
| !!! | GGACTTGGCTGTTTTGGGTT+GGG | - | Chr2:20206252-20206271 | MsG0280007761.01.T02:CDS | 50.0% |
| TGTGGTTGCTCGTCCTGCTA+AGG | - | Chr2:20205350-20205369 | MsG0280007761.01.T02:CDS | 55.0% | |
| ! | GTGCTGGGACTTGGCTGTTT+TGG | - | Chr2:20206246-20206265 | MsG0280007761.01.T02:CDS | 55.0% |
| !! | GGGACTTGGCTGTTTTGGGT+TGG | - | Chr2:20206251-20206270 | MsG0280007761.01.T02:CDS | 55.0% |
| !!! | CTTGGCTGTTTTGGGTTGGG+AGG | - | Chr2:20206255-20206274 | MsG0280007761.01.T02:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 20203938 | 20206702 | 20203938 | ID=MsG0280007761.01;Name=MsG0280007761.01 |
| Chr2 | mRNA | 20203938 | 20206702 | 20203938 | ID=MsG0280007761.01.T01;Parent=MsG0280007761.01;Name=MsG0280007761.01.T01;_AED=0.47;_eAED=0.47;_QI=81|1|1|1|0.75|0.6|5|216|468 |
| Chr2 | exon | 20205644 | 20206538 | 20205644 | ID=MsG0280007761.01.T01:exon:10403;Parent=MsG0280007761.01.T01 |
| Chr2 | exon | 20206635 | 20206702 | 20206635 | ID=MsG0280007761.01.T01:exon:10402;Parent=MsG0280007761.01.T01 |
| Chr2 | five_prime_UTR | 20206635 | 20206702 | 20206635 | ID=MsG0280007761.01.T01:five_prime_utr;Parent=MsG0280007761.01.T01 |
| Chr2 | five_prime_UTR | 20206526 | 20206538 | 20206526 | ID=MsG0280007761.01.T01:five_prime_utr;Parent=MsG0280007761.01.T01 |
| Chr2 | CDS | 20205644 | 20206525 | 20205644 | ID=MsG0280007761.01.T01:cds;Parent=MsG0280007761.01.T01 |
| Chr2 | CDS | 20205249 | 20205373 | 20205249 | ID=MsG0280007761.01.T01:cds;Parent=MsG0280007761.01.T01 |
| Chr2 | CDS | 20205019 | 20205163 | 20205019 | ID=MsG0280007761.01.T01:cds;Parent=MsG0280007761.01.T01 |
| Chr2 | CDS | 20204154 | 20204408 | 20204154 | ID=MsG0280007761.01.T01:cds;Parent=MsG0280007761.01.T01 |
| Chr2 | three_prime_UTR | 20203938 | 20204153 | 20203938 | ID=MsG0280007761.01.T01:three_prime_utr;Parent=MsG0280007761.01.T01 |
| Chr2 | mRNA | 20203938 | 20206702 | 20203938 | ID=MsG0280007761.01.T02;Parent=MsG0280007761.01;Name=MsG0280007761.01.T02;_AED=0.47;_eAED=0.47;_QI=177|1|1|1|1|1|4|216|468 |
| Chr2 | exon | 20205644 | 20206702 | 20205644 | ID=MsG0280007761.01.T02:exon:10407;Parent=MsG0280007761.01.T02 |
| Chr2 | five_prime_UTR | 20206526 | 20206702 | 20206526 | ID=MsG0280007761.01.T02:five_prime_utr;Parent=MsG0280007761.01.T02 |
| Chr2 | CDS | 20205644 | 20206525 | 20205644 | ID=MsG0280007761.01.T02:cds;Parent=MsG0280007761.01.T02 |
| Chr2 | CDS | 20205249 | 20205373 | 20205249 | ID=MsG0280007761.01.T02:cds;Parent=MsG0280007761.01.T02 |
| Chr2 | CDS | 20205019 | 20205163 | 20205019 | ID=MsG0280007761.01.T02:cds;Parent=MsG0280007761.01.T02 |
| Chr2 | CDS | 20204154 | 20204408 | 20204154 | ID=MsG0280007761.01.T02:cds;Parent=MsG0280007761.01.T02 |
| Chr2 | three_prime_UTR | 20203938 | 20204153 | 20203938 | ID=MsG0280007761.01.T02:three_prime_utr;Parent=MsG0280007761.01.T02 |
| Gene Sequence |
| Protein sequence |
