AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016865.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016865.01.T01 MTR_3g096790 65.328 747 127 11 1 639 1 723 0.0 677
MsG0380016865.01.T01 MTR_3g096790 64.583 624 121 13 89 653 90 672 1.92e-170 503
MsG0380016865.01.T01 MTR_3g096790 90.385 52 5 0 145 196 63 114 4.55e-20 95.1
MsG0380016865.01.T01 MTR_8g494210 73.756 221 45 3 444 653 695 913 1.70e-96 317
MsG0380016865.01.T01 MTR_8g494210 46.429 252 76 9 1 193 1 252 3.77e-39 155
MsG0380016865.01.T01 MTR_8g077150 54.545 297 103 7 353 639 1156 1430 5.18e-71 251
MsG0380016865.01.T01 MTR_8g077150 45.316 395 136 11 309 641 1054 1430 3.97e-69 246
MsG0380016865.01.T01 MTR_3g088495 57.692 234 74 4 430 639 277 509 1.43e-68 233
MsG0380016865.01.T01 MTR_1g022415 47.000 300 125 6 353 639 1079 1357 4.00e-63 228
MsG0380016865.01.T01 MTR_8g494210 46.429 252 76 9 1 193 1 252 3.33e-38 151
MsG0380016865.01.T01 MTR_3g088495 50.575 174 61 4 430 579 277 449 1.07e-31 129
MsG0380016865.01.T01 MTR_3g088495 50.575 174 61 4 430 579 277 449 1.20e-31 129
MsG0380016865.01.T01 MTR_3g111700 56.383 94 41 0 546 639 588 681 1.85e-31 130
MsG0380016865.01.T01 MTR_3g111700 56.383 94 41 0 546 639 584 677 1.85e-31 130
MsG0380016865.01.T01 MTR_2g049770 52.525 99 45 1 553 651 356 452 2.35e-27 116
MsG0380016865.01.T01 MTR_8g079472 52.326 86 41 0 554 639 365 450 1.10e-26 114
MsG0380016865.01.T01 MTR_8g094000 50.000 118 44 3 84 193 51 161 7.09e-25 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016865.01.T01 AT4G12770 58.382 346 89 6 359 653 548 889 9.73e-85 285
MsG0380016865.01.T01 AT4G12770 32.000 375 171 11 1 297 1 369 6.30e-31 129
MsG0380016865.01.T01 AT4G12770 58.046 348 89 6 359 653 548 891 2.30e-84 284
MsG0380016865.01.T01 AT4G12770 32.000 375 171 11 1 297 1 369 5.94e-31 130
MsG0380016865.01.T01 AT4G12780 63.248 234 54 5 449 653 647 877 3.01e-73 253
MsG0380016865.01.T01 AT4G12780 30.079 379 160 14 1 303 1 350 1.93e-18 90.5
MsG0380016865.01.T01 AT4G12780 63.248 234 54 5 449 653 674 904 4.28e-73 253
MsG0380016865.01.T01 AT4G12780 30.423 378 175 14 1 297 1 371 5.29e-25 111
MsG0380016865.01.T01 AT4G12780 61.603 237 44 6 449 639 647 882 2.06e-69 243
MsG0380016865.01.T01 AT4G12780 30.079 379 160 14 1 303 1 350 2.56e-18 90.1
MsG0380016865.01.T01 AT1G21660 53.219 233 91 5 423 639 281 511 1.22e-68 233
MsG0380016865.01.T01 AT4G36520 47.040 321 107 5 343 639 1130 1411 2.37e-68 243
MsG0380016865.01.T01 AT1G75310 46.847 333 153 6 315 639 1124 1440 1.77e-63 229
MsG0380016865.01.T01 AT1G75310 47.447 333 148 6 315 639 1124 1437 7.56e-63 227
MsG0380016865.01.T01 AT1G75100 48.039 102 53 0 538 639 538 639 1.70e-27 118
MsG0380016865.01.T01 AT4G12780 30.423 378 175 14 1 297 1 371 6.75e-25 110
MsG0380016865.01.T01 AT4G12780 50.769 130 34 4 449 549 674 802 2.18e-14 77.4
MsG0380016865.01.T01 AT1G30280 46.512 86 45 1 560 644 361 446 5.70e-20 93.6
MsG0380016865.01.T01 AT1G30280 44.086 93 49 2 560 651 361 451 2.38e-19 92.0
MsG0380016865.01.T01 AT4G12780 30.079 379 160 14 1 303 1 350 3.79e-18 89.4
MsG0380016865.01.T01 AT4G12780 50.769 130 34 4 449 549 647 775 2.10e-14 77.4
MsG0380016865.01.T01 AT4G12780 30.079 379 160 14 1 303 1 350 3.79e-18 89.4
MsG0380016865.01.T01 AT4G12780 50.769 130 34 4 449 549 647 775 2.10e-14 77.4

Find 172 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACACAGTTGTAGGTTTC+TGG 0.157218 3:-88776275 None:intergenic
TCCCTCAGCTGGAGAATTTC+AGG 0.198356 3:+88776472 MsG0380016865.01.T01:intron
CCCTTCTGCTGCACTTTATC+AGG 0.215143 3:-88778087 None:intergenic
TACAGCCGCTACTGTTAAAA+AGG 0.236113 3:+88778035 MsG0380016865.01.T01:CDS
CAGCAGCTGCAGCTCTTTCT+CGG 0.239034 3:-88775539 None:intergenic
GAAAGATCATCAACAATATT+AGG 0.291136 3:-88776324 None:intergenic
AATTTACTAATCTCTTCTAA+TGG 0.298569 3:-88774538 None:intergenic
CAGCAGCCTTCTCAGCTCTT+TGG 0.302766 3:-88775288 None:intergenic
GATGATTTGATCAATGGATT+TGG 0.304715 3:+88772702 MsG0380016865.01.T01:CDS
TGAATGATGATCAGGTATTA+TGG 0.312370 3:+88777971 MsG0380016865.01.T01:intron
CCTCAGATCATGACGATATA+TGG 0.313995 3:+88774978 MsG0380016865.01.T01:CDS
CCTCAGCAGCAGCCCTTTCA+CGG 0.316110 3:-88775381 None:intergenic
AGCAGCTGCAGCTCTTTCTC+GGG 0.328646 3:-88775538 None:intergenic
TTCAATTGATTCTTTATCTC+TGG 0.335760 3:-88774736 None:intergenic
ATGATTTGATCAATGGATTT+GGG 0.344675 3:+88772703 MsG0380016865.01.T01:CDS
CACAGGCCCACTCCTGATAT+TGG 0.347676 3:+88774394 MsG0380016865.01.T01:intron
CGTTTATTAGCTACTGAATT+CGG 0.353480 3:+88772360 MsG0380016865.01.T01:CDS
GGTGAAATTGTAAGATCCTT+TGG 0.368244 3:-88772427 None:intergenic
ATTTACTAATCTCTTCTAAT+GGG 0.371043 3:-88774537 None:intergenic
TTGTGTTTGACCACGGTGTT+GGG 0.371244 3:-88774701 None:intergenic
GCAGAAATATATTGCAGAAA+AGG 0.382951 3:+88778122 MsG0380016865.01.T01:CDS
ATGTTTGAAGACACAGTTGT+AGG 0.389263 3:-88776282 None:intergenic
GATGATCTTCTCGGCGGATT+CGG 0.391097 3:+88772633 MsG0380016865.01.T01:CDS
TAAAGAGGTTTATCATAAAC+AGG 0.396140 3:-88772579 None:intergenic
TCTGATGATGAACCAATATC+AGG 0.396642 3:-88774406 None:intergenic
CTCAGCAGCAGCCCTTTCAC+GGG 0.403036 3:-88775380 None:intergenic
GAAGTTAAGCGCTGGGCTGC+AGG 0.405772 3:+88777370 MsG0380016865.01.T01:CDS
GAAGTTGAGAGAGGAAGTTT+TGG 0.413068 3:-88772448 None:intergenic
CGCTGGGCTGCAGGGAAAGA+GGG 0.414763 3:+88777379 MsG0380016865.01.T01:CDS
GTAGGTTTCTGGTTTACCTC+TGG 0.416290 3:-88776264 None:intergenic
GACGGACATGGAAGCGAAAC+CGG 0.417593 3:-88772550 None:intergenic
CCTCTGAAGGCGTTCCAATC+TGG 0.418587 3:-88776528 None:intergenic
CTGCTTCTCTCCTCTGACTT+GGG 0.419390 3:-88775088 None:intergenic
AGGGTCTTCTGTTGCATTGG+AGG 0.419847 3:-88774455 None:intergenic
CGAGGAGGAGGTGGTCTTGA+AGG 0.420028 3:-88775052 None:intergenic
GAAAATAAATAAACAAGAAA+AGG 0.420079 3:+88772185 None:intergenic
ACTGCCTGCCAACCACATTC+AGG 0.420484 3:-88777994 None:intergenic
AGCTAGAGTGCGTGCTGAAA+GGG 0.423395 3:+88775330 MsG0380016865.01.T01:CDS
GTTGCGTTTGATGATCTTCT+CGG 0.423406 3:+88772624 MsG0380016865.01.T01:CDS
AAATCGTTCATCGTGAGATC+TGG 0.427946 3:-88772333 None:intergenic
GCGCTGGGCTGCAGGGAAAG+AGG 0.430219 3:+88777378 MsG0380016865.01.T01:CDS
CTCAGTAACCACACCTTTGA+CGG 0.433699 3:-88772740 None:intergenic
GATAGTTCATCAAATTCTAA+TGG 0.437018 3:+88774585 MsG0380016865.01.T01:CDS
ACTGCTTCTCTCCTCTGACT+TGG 0.437860 3:-88775089 None:intergenic
CCGTCATCGTCGTCGTAAAG+AGG 0.439814 3:-88772594 None:intergenic
TGACCACGGTGTTGGGGAAT+CGG 0.440553 3:-88774694 None:intergenic
CTGAAAGGGCCGCTGTTCAG+AGG 0.442095 3:+88775344 MsG0380016865.01.T01:CDS
CTGCTGCTGAGGCAAAGAAA+AGG 0.445504 3:+88775392 MsG0380016865.01.T01:CDS
AGGGCTGAAAAGGCTGCTGC+AGG 0.454335 3:+88775412 MsG0380016865.01.T01:CDS
AAGAATTGAAAGGGAAAGGA+AGG 0.455730 3:+88775159 MsG0380016865.01.T01:CDS
TGTGGAAAGGGCTGCTGCAG+AGG 0.458750 3:+88775515 MsG0380016865.01.T01:intron
TCAGAGAGGACTAGCAGATA+TGG 0.464943 3:+88774669 MsG0380016865.01.T01:CDS
AAAAGGGTCTTCTGTTGCAT+TGG 0.465313 3:-88774458 None:intergenic
GAAGAGATCGGAATCATGAT+TGG 0.465418 3:-88772499 None:intergenic
ACCGGAGGTGCTACGAGAGA+TGG 0.465933 3:-88772532 None:intergenic
GAGAGCAAAGAAGAATTGAA+AGG 0.467658 3:+88775149 MsG0380016865.01.T01:CDS
CACAAGCTGAAGCCCGTGAA+AGG 0.469852 3:+88775368 MsG0380016865.01.T01:CDS
GGCAAAGAAAAGGGCTGAAA+AGG 0.470382 3:+88775402 MsG0380016865.01.T01:CDS
CCGTGAAAGGGCTGCTGCTG+AGG 0.470897 3:+88775381 MsG0380016865.01.T01:CDS
ATCATAAACAGGCGAGTTGA+CGG 0.471295 3:-88772568 None:intergenic
CCGTGGTCAAACACAAGTTC+AGG 0.471860 3:+88774708 MsG0380016865.01.T01:CDS
AAAAGGCTGCTGCAGGGAAA+AGG 0.477375 3:+88775419 MsG0380016865.01.T01:CDS
TCCAAAATATGAAGAAAAGT+TGG 0.477629 3:+88774955 MsG0380016865.01.T01:CDS
GCTCCAACTGATTCATCCTC+AGG 0.479394 3:+88774502 MsG0380016865.01.T01:CDS
GGAGAATTTCAGGAAGTTGA+AGG 0.481680 3:+88776482 MsG0380016865.01.T01:CDS
ATATGTACTGGTCGAGGAGG+AGG 0.482183 3:-88775064 None:intergenic
GGAAAGAGAAAATGAAAGAC+AGG 0.482527 3:+88775213 MsG0380016865.01.T01:CDS
AAGCTAGAGTGCGTGCTGAA+AGG 0.485213 3:+88775329 MsG0380016865.01.T01:CDS
AGAGCAAAGAAGAATTGAAA+GGG 0.486134 3:+88775150 MsG0380016865.01.T01:CDS
CCCATCTCTCGTAGCACCTC+CGG 0.486573 3:+88772531 MsG0380016865.01.T01:CDS
AGAAAGGCGAAAAGCCAGAT+TGG 0.487061 3:+88776514 MsG0380016865.01.T01:CDS
CTTGTGTTTGACCACGGTGT+TGG 0.489404 3:-88774702 None:intergenic
ACGGTGGTTTCTTCCGTCTA+CGG 0.494243 3:-88772307 None:intergenic
AAAGAAGAATTGAAAGGGAA+AGG 0.494666 3:+88775155 MsG0380016865.01.T01:CDS
GAGAACAACAGAGACTTGAG+AGG 0.495826 3:+88775191 MsG0380016865.01.T01:CDS
CTTAGTACATACATATTGTA+AGG 0.496733 3:-88777425 None:intergenic
CGCGCTCCTGAGCCCTCTGA+AGG 0.498449 3:-88776541 None:intergenic
GTCGGTGGATCAGCAGTTAG+AGG 0.500658 3:-88772282 None:intergenic
AGAAAATGAAAGACAGGCTG+TGG 0.501628 3:+88775219 MsG0380016865.01.T01:CDS
ATTGGAAGAGTGAAAGGATC+GGG 0.502219 3:-88772481 None:intergenic
GGGATTAGAATTGAAGAGAT+CGG 0.502447 3:-88772511 None:intergenic
CATATCTGCCCGAGAATTGA+CGG 0.506680 3:-88774930 None:intergenic
TTAGAAAGAAATGTATAGAA+AGG 0.507995 3:-88778171 None:intergenic
AAACCATGAGCAGCAGCAAA+AGG 0.509397 3:+88775114 MsG0380016865.01.T01:CDS
CTGTGTCTTCAAACATAAAG+AGG 0.511873 3:+88776289 MsG0380016865.01.T01:CDS
TGCTGCTGAGGCAAAGAAAA+GGG 0.513805 3:+88775393 MsG0380016865.01.T01:CDS
TCAACAATATTAGGTGATGA+TGG 0.515248 3:-88776315 None:intergenic
CCGGAGGTGCTACGAGAGAT+GGG 0.515653 3:-88772531 None:intergenic
ACAAGCTGAAGCCCGTGAAA+GGG 0.521348 3:+88775369 MsG0380016865.01.T01:CDS
TGGACTTTGAAGTTAAGCGC+TGG 0.522927 3:+88777362 MsG0380016865.01.T01:CDS
CTTCCGTCTACGGTGGTCGG+TGG 0.522990 3:-88772297 None:intergenic
TCTGCTCTCTTTGAGTCTGT+AGG 0.527874 3:-88777008 None:intergenic
TCTGACTTGGGAATATGTAC+TGG 0.528885 3:-88775076 None:intergenic
GGACTTTGAAGTTAAGCGCT+GGG 0.530794 3:+88777363 MsG0380016865.01.T01:CDS
CTTCTAATGGGTCTGAAAAG+TGG 0.534760 3:-88774525 None:intergenic
TTTATACTAGGCAAAGGCAT+TGG 0.535677 3:+88776966 MsG0380016865.01.T01:intron
TCAGAGGCTTGCGGAAACAC+TGG 0.536353 3:+88777342 MsG0380016865.01.T01:intron
GAATTTCCAAGTCCATCAAA+AGG 0.540071 3:-88774630 None:intergenic
ATCATGATTGGAAGAGTGAA+AGG 0.543443 3:-88772487 None:intergenic
ATGGCCTGAATGTGGTTGGC+AGG 0.545019 3:+88777990 MsG0380016865.01.T01:CDS
TTGAAGGGGAAAGTGAAGAA+AGG 0.545134 3:+88776498 MsG0380016865.01.T01:CDS
TCAGCAGTTAGAGGAAGAGA+AGG 0.545352 3:-88772273 None:intergenic
ATTGGCTGAGAAGAATCAAC+GGG 0.546286 3:+88776984 MsG0380016865.01.T01:CDS
GGAACGCCTTCAGAGGGCTC+AGG 0.554110 3:+88776535 MsG0380016865.01.T01:CDS
GCAGTTAGAGGAAGAGAAGG+AGG 0.556656 3:-88772270 None:intergenic
GAGAATTTCAGGAAGTTGAA+GGG 0.556708 3:+88776483 MsG0380016865.01.T01:CDS
AGCTCGCCAAAGAGCTGAGA+AGG 0.557004 3:+88775282 MsG0380016865.01.T01:CDS
GAAGGTGGTGGAGCAGAAGT+TGG 0.558690 3:-88775034 None:intergenic
AAGTTAAGCGCTGGGCTGCA+GGG 0.559252 3:+88777371 MsG0380016865.01.T01:CDS
TCCTGATAAAGTGCAGCAGA+AGG 0.559973 3:+88778086 MsG0380016865.01.T01:CDS
TTTCTTCCGTCTACGGTGGT+CGG 0.560986 3:-88772300 None:intergenic
ATTCGGTCATTCGAAGAAAA+CGG 0.561173 3:+88772650 MsG0380016865.01.T01:CDS
TGTACTGGTCGAGGAGGAGG+TGG 0.561547 3:-88775061 None:intergenic
TCAGTAACCACACCTTTGAC+GGG 0.564015 3:-88772739 None:intergenic
CCTCTTTACGACGACGATGA+CGG 0.565572 3:+88772594 MsG0380016865.01.T01:CDS
TGGCCTGAGGATGAATCAGT+TGG 0.568887 3:-88774505 None:intergenic
TGAGCAGCAGCAAAAGGAGA+TGG 0.568955 3:+88775120 MsG0380016865.01.T01:CDS
TGAAAGGGCCGCTGTTCAGA+GGG 0.569740 3:+88775345 MsG0380016865.01.T01:CDS
ATGTGAATCGAAGTTGAGAG+AGG 0.572513 3:-88772457 None:intergenic
AACAGGCGAGTTGACGGACA+TGG 0.572944 3:-88772562 None:intergenic
GCTGGGCTGCAGGGAAAGAG+GGG 0.574702 3:+88777380 MsG0380016865.01.T01:CDS
CCAGATTGGAACGCCTTCAG+AGG 0.574933 3:+88776528 MsG0380016865.01.T01:CDS
ATATCTGCCCGAGAATTGAC+GGG 0.576043 3:-88774929 None:intergenic
ATAGCAAGTCCTCCCGTCAA+AGG 0.576669 3:+88772727 MsG0380016865.01.T01:CDS
GTCCTCTCTGATGAAAATGC+TGG 0.577003 3:-88774657 None:intergenic
GATTGGAAGAGTGAAAGGAT+CGG 0.577344 3:-88772482 None:intergenic
GGAGGTGGTCTTGAAGGTGG+TGG 0.579037 3:-88775046 None:intergenic
GTGAAGAATGAGAGAGGTGT+CGG 0.580582 3:+88772672 MsG0380016865.01.T01:CDS
GGAGGAGGTGGTCTTGAAGG+TGG 0.581949 3:-88775049 None:intergenic
GATCCACCGACCACCGTAGA+CGG 0.589033 3:+88772294 MsG0380016865.01.T01:five_prime_UTR
TGATGCACAATTTCAGCCAG+AGG 0.589144 3:+88776248 MsG0380016865.01.T01:CDS
GGGCTGAAAAGGCTGCTGCA+GGG 0.592584 3:+88775413 MsG0380016865.01.T01:CDS
CCATATATCGTCATGATCTG+AGG 0.593418 3:-88774978 None:intergenic
TTGGGAATATGTACTGGTCG+AGG 0.596893 3:-88775070 None:intergenic
AAAACGGTGAAGAATGAGAG+AGG 0.603787 3:+88772666 MsG0380016865.01.T01:CDS
CAGATTGGAACGCCTTCAGA+GGG 0.608050 3:+88776529 MsG0380016865.01.T01:CDS
ATTGGTGCAGATTTGCCTTG+AGG 0.610923 3:-88772390 None:intergenic
AATATATTTCTGCTGAAGAG+TGG 0.620107 3:-88778112 None:intergenic
CATTGGCTGAGAAGAATCAA+CGG 0.622100 3:+88776983 MsG0380016865.01.T01:CDS
GATGAACCAATATCAGGAGT+GGG 0.623236 3:-88774400 None:intergenic
TTGGATGATGATGATGACAT+TGG 0.623868 3:-88772408 None:intergenic
TCATGACGATATATGGCTAA+CGG 0.623870 3:+88774985 MsG0380016865.01.T01:CDS
CCTGATAAAGTGCAGCAGAA+GGG 0.624350 3:+88778087 MsG0380016865.01.T01:CDS
GAATTCGGTTTGAAACCTCA+AGG 0.625188 3:+88772375 MsG0380016865.01.T01:CDS
TCAGAGGGCTCAGGAGCGCG+CGG 0.626791 3:+88776544 MsG0380016865.01.T01:CDS
AGAATTTCAGGAAGTTGAAG+GGG 0.630146 3:+88776484 MsG0380016865.01.T01:CDS
TGATGAACCAATATCAGGAG+TGG 0.633810 3:-88774401 None:intergenic
TGAGGATGAATCAGTTGGAG+CGG 0.639821 3:-88774500 None:intergenic
ATGTCATCATCATCATCCAA+AGG 0.640651 3:+88772411 MsG0380016865.01.T01:CDS
TCGTGAGATCTGGTGAACGG+TGG 0.642494 3:-88772323 None:intergenic
TCATCGTGAGATCTGGTGAA+CGG 0.643199 3:-88772326 None:intergenic
GGTCAAACACAAGTTCAGGT+TGG 0.644850 3:+88774712 MsG0380016865.01.T01:CDS
GCAGCAGCAAAAGGAGATGG+AGG 0.644915 3:+88775123 MsG0380016865.01.T01:CDS
CAGTTAGAGGAAGAGAAGGA+GGG 0.646142 3:-88772269 None:intergenic
TATTATGGCCTGAATGTGGT+TGG 0.649392 3:+88777986 MsG0380016865.01.T01:CDS
GTGGTTTCTTCCGTCTACGG+TGG 0.651169 3:-88772304 None:intergenic
AGCTTGTGCCCTCTGAACAG+CGG 0.653667 3:-88775353 None:intergenic
AGAACAACAGAGACTTGAGA+GGG 0.653891 3:+88775192 MsG0380016865.01.T01:CDS
TGTGTTTGACCACGGTGTTG+GGG 0.654993 3:-88774700 None:intergenic
TGTGTCTTCAAACATAAAGA+GGG 0.655665 3:+88776290 MsG0380016865.01.T01:CDS
GAGAAGATCATCAAACGCAA+CGG 0.656158 3:-88772622 None:intergenic
ACATTGATTTCAGAGGCTTG+CGG 0.656214 3:+88777333 MsG0380016865.01.T01:intron
AGTACATATTCCCAAGTCAG+AGG 0.661965 3:+88775078 MsG0380016865.01.T01:CDS
CCTGAACTTGTGTTTGACCA+CGG 0.670451 3:-88774708 None:intergenic
GGAATATGTACTGGTCGAGG+AGG 0.673478 3:-88775067 None:intergenic
GTAACCACACCTTTGACGGG+AGG 0.676329 3:-88772736 None:intergenic
CAGGTATTATGGCCTGAATG+TGG 0.679133 3:+88777982 MsG0380016865.01.T01:intron
AGTACATACATATTGTAAGG+TGG 0.690241 3:-88777422 None:intergenic
TGGGTCTGAAAAGTGGCCTG+AGG 0.703931 3:-88774518 None:intergenic
GCGTTTGATGATCTTCTCGG+CGG 0.720705 3:+88772627 MsG0380016865.01.T01:CDS
GGACATGGAAGCGAAACCGG+AGG 0.721282 3:-88772547 None:intergenic
GCACCGATTCCCCAACACCG+TGG 0.760752 3:+88774691 MsG0380016865.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGAGTTTTAAATAAAAA+AGG + Chr3:88776088-88776107 MsG0380016865.01.T01:intron 10.0%
!!! AAAGAGTTTTAAATAAAAAA+GGG + Chr3:88776089-88776108 MsG0380016865.01.T01:intron 10.0%
!!! AAATGTAATTAATTTTGTAT+AGG - Chr3:88775984-88776003 None:intergenic 10.0%
!! AAACATTATTTATACTAAAG+CGG + Chr3:88775682-88775701 MsG0380016865.01.T01:intron 15.0%
!! AAATAACATTAATGTTTCAT+TGG - Chr3:88775851-88775870 None:intergenic 15.0%
!! AATATATAATAGATAGCATA+AGG - Chr3:88777478-88777497 None:intergenic 15.0%
!! CATTAATAATAAAAATGATG+GGG - Chr3:88775738-88775757 None:intergenic 15.0%
!! GAAAGAATATTAAAAAAATC+TGG - Chr3:88777523-88777542 None:intergenic 15.0%
!! GCATTAATAATAAAAATGAT+GGG - Chr3:88775739-88775758 None:intergenic 15.0%
!! TGCATTAATAATAAAAATGA+TGG - Chr3:88775740-88775759 None:intergenic 15.0%
!!! AAACTCTTTTAAAATAAAAG+TGG - Chr3:88776078-88776097 None:intergenic 15.0%
!!! AAATGACAATTTAAAATTTG+AGG - Chr3:88773257-88773276 None:intergenic 15.0%
!!! ATCATTTTTATTATTAATGC+AGG + Chr3:88775739-88775758 MsG0380016865.01.T01:intron 15.0%
!!! CTGATTCAAATATTTTAAAA+GGG - Chr3:88774477-88774496 None:intergenic 15.0%
!!! TTTAGTTCAAAATTGTAAAT+TGG - Chr3:88776655-88776674 None:intergenic 15.0%
!!! TTTTTCTTTTTAACAACTAA+TGG - Chr3:88776815-88776834 None:intergenic 15.0%
!! AAAACCATCATTAAATAAGA+AGG - Chr3:88774906-88774925 None:intergenic 20.0%
!! AAACCATCATTAAATAAGAA+GGG - Chr3:88774905-88774924 None:intergenic 20.0%
!! AAATAATGTTTATCAAGACA+TGG - Chr3:88775673-88775692 None:intergenic 20.0%
!! AACTAATACGTGAAAAATAA+GGG - Chr3:88774328-88774347 None:intergenic 20.0%
!! AAGAGAGTAATAAATAGTTA+AGG - Chr3:88775885-88775904 None:intergenic 20.0%
!! AATTTACTAATCTCTTCTAA+TGG - Chr3:88774541-88774560 None:intergenic 20.0%
!! ACAAAATTGTCCTTAATAAA+TGG - Chr3:88775938-88775957 None:intergenic 20.0%
!! AGAGAGTAATAAATAGTTAA+GGG - Chr3:88775884-88775903 None:intergenic 20.0%
!! AGATTTGAATTGAAATCTTA+TGG + Chr3:88774219-88774238 MsG0380016865.01.T01:intron 20.0%
!! ATAATGTGTTTAAACTTAAG+TGG + Chr3:88773204-88773223 MsG0380016865.01.T01:intron 20.0%
!! ATCAGGTAATTACTAAAATT+AGG + Chr3:88777711-88777730 MsG0380016865.01.T01:intron 20.0%
!! ATTTACTAATCTCTTCTAAT+GGG - Chr3:88774540-88774559 None:intergenic 20.0%
!! CTTAAGTTTAAACACATTAT+CGG - Chr3:88773204-88773223 None:intergenic 20.0%
!! TATGGATAACATATAAATAG+TGG - Chr3:88777673-88777692 None:intergenic 20.0%
!! TATTCAAGGATAAAAGAATA+TGG - Chr3:88773339-88773358 None:intergenic 20.0%
!! TTAAAAACACTATAAGTTAC+TGG - Chr3:88777898-88777917 None:intergenic 20.0%
!! TTAGAAAGAAATGTATAGAA+AGG - Chr3:88778174-88778193 None:intergenic 20.0%
!! TTAGAATCAGATGAATATTT+AGG - Chr3:88774852-88774871 None:intergenic 20.0%
!! TTGAATGTAATCATATTTGT+TGG + Chr3:88773014-88773033 MsG0380016865.01.T01:intron 20.0%
!!! AATTTTAGTAATTACCTGAT+TGG - Chr3:88777711-88777730 None:intergenic 20.0%
!!! AGTAACTTATAGTGTTTTTA+AGG + Chr3:88777897-88777916 MsG0380016865.01.T01:intron 20.0%
!!! ATATATTTTGAACATGCAAT+GGG - Chr3:88777116-88777135 None:intergenic 20.0%
!!! CGTTTTAAATGTTAAAAGTT+TGG + Chr3:88776147-88776166 MsG0380016865.01.T01:intron 20.0%
!!! GCTGATTCAAATATTTTAAA+AGG - Chr3:88774478-88774497 None:intergenic 20.0%
!!! TAAATAGTTAAGGGTATAAT+AGG - Chr3:88775875-88775894 None:intergenic 20.0%
!!! TATATATTTTGAACATGCAA+TGG - Chr3:88777117-88777136 None:intergenic 20.0%
!!! TATTCTTTTATCCTTGAATA+TGG + Chr3:88773339-88773358 MsG0380016865.01.T01:intron 20.0%
!!! TCAGTGATTTAATTTTTGAA+CGG + Chr3:88773910-88773929 MsG0380016865.01.T01:intron 20.0%
!!! TGAAAGAGATAGTTTTTTAT+AGG - Chr3:88777154-88777173 None:intergenic 20.0%
!!! TTGTTATTGATAGTAAAAGA+AGG + Chr3:88776606-88776625 MsG0380016865.01.T01:intron 20.0%
!!! TTTCTTTAAAAAAATGCTTG+AGG + Chr3:88777497-88777516 MsG0380016865.01.T01:intron 20.0%
! AAATGTTCCTATTTGACTAA+AGG - Chr3:88773968-88773987 None:intergenic 25.0%
! AACCATCATTAAATAAGAAG+GGG - Chr3:88774904-88774923 None:intergenic 25.0%
! AACTGAAAGAAAGAAAGAAA+TGG - Chr3:88776850-88776869 None:intergenic 25.0%
! AATCATCCAACATAAAGATT+AGG - Chr3:88777223-88777242 None:intergenic 25.0%
! AATGTTCCTATTTGACTAAA+GGG - Chr3:88773967-88773986 None:intergenic 25.0%
! AGTAGATCTTTCAAGAATAT+GGG + Chr3:88773677-88773696 MsG0380016865.01.T01:intron 25.0%
! ATTGTCCTTAATAAATGGTA+TGG - Chr3:88775933-88775952 None:intergenic 25.0%
! CAACTAATACGTGAAAAATA+AGG - Chr3:88774329-88774348 None:intergenic 25.0%
! CAATAACTTTCTTATTCCAT+AGG - Chr3:88774172-88774191 None:intergenic 25.0%
! CTTAGTACATACATATTGTA+AGG - Chr3:88777428-88777447 None:intergenic 25.0%
! CTTCTTAAATAAAAATGCAC+AGG - Chr3:88774114-88774133 None:intergenic 25.0%
! GAAAGATCATCAACAATATT+AGG - Chr3:88776327-88776346 None:intergenic 25.0%
! GATAGTTCATCAAATTCTAA+TGG + Chr3:88774585-88774604 MsG0380016865.01.T01:CDS 25.0%
! GGAATAAGAATAATCGAAAA+GGG + Chr3:88774292-88774311 MsG0380016865.01.T01:intron 25.0%
! TAAAGAGGTTTATCATAAAC+AGG - Chr3:88772582-88772601 None:intergenic 25.0%
! TAGACAACTGAAATAAATCT+TGG + Chr3:88773843-88773862 MsG0380016865.01.T01:intron 25.0%
! TAGTAGATCTTTCAAGAATA+TGG + Chr3:88773676-88773695 MsG0380016865.01.T01:intron 25.0%
! TCCAAAACGTCATATAATTT+GGG + Chr3:88776022-88776041 MsG0380016865.01.T01:intron 25.0%
! TCCAAAATATGAAGAAAAGT+TGG + Chr3:88774955-88774974 MsG0380016865.01.T01:CDS 25.0%
! TGGAAAATGCTTATACAATA+TGG - Chr3:88777691-88777710 None:intergenic 25.0%
! TGTAAAGCGACTTATAATTT+GGG - Chr3:88775825-88775844 None:intergenic 25.0%
! TTAACAAACATGAAGAGAAT+GGG + Chr3:88774271-88774290 MsG0380016865.01.T01:intron 25.0%
! TTGTAAAGCGACTTATAATT+TGG - Chr3:88775826-88775845 None:intergenic 25.0%
! TTGTCCTTAATAAATGGTAT+GGG - Chr3:88775932-88775951 None:intergenic 25.0%
! TTTAACAAACATGAAGAGAA+TGG + Chr3:88774270-88774289 MsG0380016865.01.T01:intron 25.0%
! TTTGATATCTTGAAAGTGAA+AGG + Chr3:88776754-88776773 MsG0380016865.01.T01:intron 25.0%
!! AAAAGCTTTTGGTGAAATAT+TGG + Chr3:88773129-88773148 MsG0380016865.01.T01:intron 25.0%
!! AACCATTACCTTTTTATACT+AGG + Chr3:88776954-88776973 MsG0380016865.01.T01:intron 25.0%
!! ATGATTTGATCAATGGATTT+GGG + Chr3:88772703-88772722 MsG0380016865.01.T01:CDS 25.0%
!! CTAAAATTAGGTGCATTTTA+AGG + Chr3:88777723-88777742 MsG0380016865.01.T01:intron 25.0%
!! GCTTTTGCTTATTATGTATT+TGG + Chr3:88773604-88773623 MsG0380016865.01.T01:intron 25.0%
!! TTCAATTGATTCTTTATCTC+TGG - Chr3:88774739-88774758 None:intergenic 25.0%
!! TTTTATCTGGTAGCTTAAAA+CGG + Chr3:88774145-88774164 MsG0380016865.01.T01:intron 25.0%
!! TTTTCAATTCTTACAAGTGT+CGG - Chr3:88772984-88773003 None:intergenic 25.0%
!!! AACTTATAGTGTTTTTAAGG+TGG + Chr3:88777900-88777919 MsG0380016865.01.T01:intron 25.0%
!!! AGTGGATTTATCATTTTATC+TGG + Chr3:88774132-88774151 MsG0380016865.01.T01:intron 25.0%
!!! AGTGTTTTGTTTATAGCTTA+AGG + Chr3:88774049-88774068 MsG0380016865.01.T01:intron 25.0%
!!! CATGTTTTATTATATAGTGC+AGG - Chr3:88773380-88773399 None:intergenic 25.0%
!!! CTTTTCTTTTTATTTGTGAC+CGG + Chr3:88777061-88777080 MsG0380016865.01.T01:intron 25.0%
!!! GATCATTTTCATTTTTTTGC+TGG - Chr3:88775575-88775594 None:intergenic 25.0%
!!! GATTTTGATGATTTGATCAA+TGG + Chr3:88772696-88772715 MsG0380016865.01.T01:CDS 25.0%
!!! GTGCATTTTTATTTAAGAAG+TGG + Chr3:88774114-88774133 MsG0380016865.01.T01:intron 25.0%
!!! GTGTTTTGTTTATAGCTTAA+GGG + Chr3:88774050-88774069 MsG0380016865.01.T01:intron 25.0%
!!! TTTTCTTTTTATTTGTGACC+GGG + Chr3:88777062-88777081 MsG0380016865.01.T01:intron 25.0%
!!! TTTTTGAATTGGTTCATCAT+TGG + Chr3:88773935-88773954 MsG0380016865.01.T01:intron 25.0%
AAACGTCATATAATTTGGGA+CGG + Chr3:88776026-88776045 MsG0380016865.01.T01:intron 30.0%
AAAGAAGAATTGAAAGGGAA+AGG + Chr3:88775155-88775174 MsG0380016865.01.T01:CDS 30.0%
AACACTAAGATCAATTTCGA+AGG - Chr3:88773509-88773528 None:intergenic 30.0%
AATAAAACCGTGCAAATTAG+CGG - Chr3:88777276-88777295 None:intergenic 30.0%
ACAACTGAAATAAATCTTGG+AGG + Chr3:88773846-88773865 MsG0380016865.01.T01:intron 30.0%
AGAGCAAAGAAGAATTGAAA+GGG + Chr3:88775150-88775169 MsG0380016865.01.T01:CDS 30.0%
AGCATCTTAAAGAAAAGAGT+TGG - Chr3:88776875-88776894 None:intergenic 30.0%
AGGATACAAACAAACACATA+TGG - Chr3:88773725-88773744 None:intergenic 30.0%
AGTACATACATATTGTAAGG+TGG - Chr3:88777425-88777444 None:intergenic 30.0%
AGTGGAGGAATTTAAATTAC+TGG - Chr3:88777655-88777674 None:intergenic 30.0%
ATACGTGAAAAATAAGGGAT+CGG - Chr3:88774323-88774342 None:intergenic 30.0%
ATCACAGTCAATTGAAATGA+AGG + Chr3:88777799-88777818 MsG0380016865.01.T01:intron 30.0%
ATGTGTTTAAACTTAAGTGG+TGG + Chr3:88773207-88773226 MsG0380016865.01.T01:intron 30.0%
ATTAAATAAGAAGGGGAAGT+AGG - Chr3:88774897-88774916 None:intergenic 30.0%
CAAACATACCATTGTTTGAA+AGG + Chr3:88773782-88773801 MsG0380016865.01.T01:intron 30.0%
CAACATAAAGATTAGGAAGT+TGG - Chr3:88777216-88777235 None:intergenic 30.0%
CAACTTCCTAATCTTTATGT+TGG + Chr3:88777214-88777233 MsG0380016865.01.T01:intron 30.0%
CAATTGAAAAATTGTCTGTG+AGG + Chr3:88774751-88774770 MsG0380016865.01.T01:intron 30.0%
CATAGACAAACAATTTGAAG+AGG - Chr3:88776926-88776945 None:intergenic 30.0%
CGTTTATTAGCTACTGAATT+CGG + Chr3:88772360-88772379 MsG0380016865.01.T01:CDS 30.0%
CTCATGAAGTTATAATGTGT+AGG - Chr3:88774031-88774050 None:intergenic 30.0%
CTTTCCCATACCATTTATTA+AGG + Chr3:88775925-88775944 MsG0380016865.01.T01:intron 30.0%
GCAATATACTGTTATTGATG+TGG + Chr3:88776374-88776393 MsG0380016865.01.T01:intron 30.0%
GCAGAAATATATTGCAGAAA+AGG + Chr3:88778122-88778141 MsG0380016865.01.T01:CDS 30.0%
GCAGAATATTATCTATTTGC+TGG + Chr3:88773409-88773428 MsG0380016865.01.T01:intron 30.0%
GCTTCAAACCATAAAGAAAA+GGG - Chr3:88776449-88776468 None:intergenic 30.0%
GGATAACATATAAATAGTGG+AGG - Chr3:88777670-88777689 None:intergenic 30.0%
GGGAATAAGAATAATCGAAA+AGG + Chr3:88774291-88774310 MsG0380016865.01.T01:intron 30.0%
GTCCAAAACGTCATATAATT+TGG + Chr3:88776021-88776040 MsG0380016865.01.T01:intron 30.0%
GTGTTGGGATAAAGAATAAA+GGG + Chr3:88776696-88776715 MsG0380016865.01.T01:intron 30.0%
TAGATTACCACACAAATGAT+AGG - Chr3:88773745-88773764 None:intergenic 30.0%
TCAACAATATTAGGTGATGA+TGG - Chr3:88776318-88776337 None:intergenic 30.0%
TCAATTGACTGTGATTGATT+TGG - Chr3:88777794-88777813 None:intergenic 30.0%
TCGAAATTGATCTTAGTGTT+TGG + Chr3:88773509-88773528 MsG0380016865.01.T01:intron 30.0%
TCTGTAATGCTTTGTCTATT+AGG + Chr3:88774196-88774215 MsG0380016865.01.T01:intron 30.0%
TGAATGATGATCAGGTATTA+TGG + Chr3:88777971-88777990 MsG0380016865.01.T01:intron 30.0%
TGCCTAGTATAAAAAGGTAA+TGG - Chr3:88776959-88776978 None:intergenic 30.0%
TGCTTCAAACCATAAAGAAA+AGG - Chr3:88776450-88776469 None:intergenic 30.0%
TGTGTCTTCAAACATAAAGA+GGG + Chr3:88776290-88776309 MsG0380016865.01.T01:CDS 30.0%
TGTTGGGATAAAGAATAAAG+GGG + Chr3:88776697-88776716 MsG0380016865.01.T01:intron 30.0%
TTAACTTATCGTTTCATCAC+AGG + Chr3:88774377-88774396 MsG0380016865.01.T01:intron 30.0%
TTAATTAAGAAGTTACGCTC+AGG - Chr3:88772766-88772785 None:intergenic 30.0%
TTCTGTATCTCTTTACTTTC+AGG + Chr3:88776215-88776234 MsG0380016865.01.T01:intron 30.0%
TTTGCGAAAAACTGTATGTT+TGG + Chr3:88773632-88773651 MsG0380016865.01.T01:intron 30.0%
TTTGTATCCTATCATTTGTG+TGG + Chr3:88773735-88773754 MsG0380016865.01.T01:intron 30.0%
! AATATATTTCTGCTGAAGAG+TGG - Chr3:88778115-88778134 None:intergenic 30.0%
! AGTGTTGGGATAAAGAATAA+AGG + Chr3:88776695-88776714 MsG0380016865.01.T01:intron 30.0%
! ATAAGCCTTTTTAACAGTAG+CGG - Chr3:88778043-88778062 None:intergenic 30.0%
! ATGAAGGGTTTAAAAGCTTT+TGG + Chr3:88773118-88773137 MsG0380016865.01.T01:intron 30.0%
! ATTGATTCCTATAGAAGTGT+TGG + Chr3:88776680-88776699 MsG0380016865.01.T01:intron 30.0%
! GACTTATAATTTGTGACGTA+GGG - Chr3:88775783-88775802 None:intergenic 30.0%
! GATGATCTTTCCTCAATTTT+TGG + Chr3:88776336-88776355 MsG0380016865.01.T01:CDS 30.0%
! GATGATTTGATCAATGGATT+TGG + Chr3:88772702-88772721 MsG0380016865.01.T01:CDS 30.0%
! GCCAACTTTTCTTCATATTT+TGG - Chr3:88774959-88774978 None:intergenic 30.0%
! GTGAAATATTGGTTAGAGAT+CGG + Chr3:88773140-88773159 MsG0380016865.01.T01:intron 30.0%
! GTTTAAACACATTATCGGTT+CGG - Chr3:88773199-88773218 None:intergenic 30.0%
! TAACAACTAATGGATAGTGT+AGG - Chr3:88776805-88776824 None:intergenic 30.0%
! TACCTTTTTATACTAGGCAA+AGG + Chr3:88776960-88776979 MsG0380016865.01.T01:intron 30.0%
! TATAGCATCGAAATTTCTGA+TGG - Chr3:88773090-88773109 None:intergenic 30.0%
! TCCCAAATTATATGACGTTT+TGG - Chr3:88776026-88776045 None:intergenic 30.0%
! TGACTTATAATTTGTGACGT+AGG - Chr3:88775784-88775803 None:intergenic 30.0%
! TGTATAAGCATTTTCCAATC+AGG + Chr3:88777694-88777713 MsG0380016865.01.T01:intron 30.0%
! TTCCCCTTCTTATTTAATGA+TGG + Chr3:88774899-88774918 MsG0380016865.01.T01:intron 30.0%
! TTTCGGTGTACATTAAATCA+CGG - Chr3:88777841-88777860 None:intergenic 30.0%
! TTTGAACGGCATTTTTGAAT+TGG + Chr3:88773924-88773943 MsG0380016865.01.T01:intron 30.0%
! TTTTCCATCCCTTTTCTTTA+TGG + Chr3:88776438-88776457 MsG0380016865.01.T01:intron 30.0%
!! ATGCTATATAGTTCTGATGA+AGG + Chr3:88773102-88773121 MsG0380016865.01.T01:intron 30.0%
!! CTTTTAAGAGGCTTTCATAT+AGG + Chr3:88773303-88773322 MsG0380016865.01.T01:intron 30.0%
!! TATCTACACATTGATTTCAG+AGG + Chr3:88777326-88777345 MsG0380016865.01.T01:intron 30.0%
!! TGCTATATAGTTCTGATGAA+GGG + Chr3:88773103-88773122 MsG0380016865.01.T01:intron 30.0%
!! TTGATTCCTATAGAAGTGTT+GGG + Chr3:88776681-88776700 MsG0380016865.01.T01:intron 30.0%
!! TTTAAACACATTATCGGTTC+GGG - Chr3:88773198-88773217 None:intergenic 30.0%
!!! CTTTTCTTTAAGATGCTAAC+TGG + Chr3:88776878-88776897 MsG0380016865.01.T01:intron 30.0%
AAATCTTGGAGGAGTTTGTA+AGG + Chr3:88773857-88773876 MsG0380016865.01.T01:intron 35.0%
AAGAAGGCAACCAATAGTAA+AGG + Chr3:88776622-88776641 MsG0380016865.01.T01:intron 35.0%
AAGAATTGAAAGGGAAAGGA+AGG + Chr3:88775159-88775178 MsG0380016865.01.T01:CDS 35.0%
AAGTACTTGTATAATGCCCA+GGG + Chr3:88777445-88777464 MsG0380016865.01.T01:intron 35.0%
AATCCTACCTCCAAAAATTG+AGG - Chr3:88776349-88776368 None:intergenic 35.0%
AATCTTGGAGGAGTTTGTAA+GGG + Chr3:88773858-88773877 MsG0380016865.01.T01:intron 35.0%
ACCATTGTTTGAAAGGTAAC+AGG + Chr3:88773789-88773808 MsG0380016865.01.T01:intron 35.0%
AGAATTTCAGGAAGTTGAAG+GGG + Chr3:88776484-88776503 MsG0380016865.01.T01:CDS 35.0%
AGATTCACGAAGGAACATTT+CGG - Chr3:88777858-88777877 None:intergenic 35.0%
ATCATGATTGGAAGAGTGAA+AGG - Chr3:88772490-88772509 None:intergenic 35.0%
ATGAAAGCCTCTTAAAAGAC+AGG - Chr3:88773301-88773320 None:intergenic 35.0%
ATGTCATCATCATCATCCAA+AGG + Chr3:88772411-88772430 MsG0380016865.01.T01:CDS 35.0%
ATGTTTGAAGACACAGTTGT+AGG - Chr3:88776285-88776304 None:intergenic 35.0%
ATTCGGTCATTCGAAGAAAA+CGG + Chr3:88772650-88772669 MsG0380016865.01.T01:CDS 35.0%
ATTTGCCGAACATTAAGAGT+TGG + Chr3:88773555-88773574 MsG0380016865.01.T01:intron 35.0%
CAAACCATAAAGAAAAGGGA+TGG - Chr3:88776445-88776464 None:intergenic 35.0%
CCAAACCAACTCTTAATGTT+CGG - Chr3:88773563-88773582 None:intergenic 35.0%
CTGTGTCTTCAAACATAAAG+AGG + Chr3:88776289-88776308 MsG0380016865.01.T01:CDS 35.0%
CTTGTGAACTTCCATATTCA+AGG - Chr3:88773353-88773372 None:intergenic 35.0%
CTTTATCCCAACACTTCTAT+AGG - Chr3:88776690-88776709 None:intergenic 35.0%
GAATATTTAGGCATGCCATA+TGG - Chr3:88774840-88774859 None:intergenic 35.0%
GAATTTCCAAGTCCATCAAA+AGG - Chr3:88774633-88774652 None:intergenic 35.0%
GAGAATTTCAGGAAGTTGAA+GGG + Chr3:88776483-88776502 MsG0380016865.01.T01:CDS 35.0%
GAGAGCAAAGAAGAATTGAA+AGG + Chr3:88775149-88775168 MsG0380016865.01.T01:CDS 35.0%
GATCTCAAAAGTGGCTATAA+TGG + Chr3:88773531-88773550 MsG0380016865.01.T01:intron 35.0%
GATTCTAATAAACCAGTAGC+TGG + Chr3:88774864-88774883 MsG0380016865.01.T01:intron 35.0%
GGAAAGAGAAAATGAAAGAC+AGG + Chr3:88775213-88775232 MsG0380016865.01.T01:CDS 35.0%
GGGATTAGAATTGAAGAGAT+CGG - Chr3:88772514-88772533 None:intergenic 35.0%
GGTGAAATTGTAAGATCCTT+TGG - Chr3:88772430-88772449 None:intergenic 35.0%
GTGTAGGTACAAGATTTCAT+TGG - Chr3:88774015-88774034 None:intergenic 35.0%
GTTATCCTTGCAGTTAAACA+AGG + Chr3:88773431-88773450 MsG0380016865.01.T01:intron 35.0%
GTTGGATGATTGTGATTAGT+TGG + Chr3:88777232-88777251 MsG0380016865.01.T01:intron 35.0%
TAAGTACTTGTATAATGCCC+AGG + Chr3:88777444-88777463 MsG0380016865.01.T01:intron 35.0%
TACCTGATCATCATTCATGA+AGG - Chr3:88777968-88777987 None:intergenic 35.0%
TAGTGTTTGGATCTCAAAAG+TGG + Chr3:88773522-88773541 MsG0380016865.01.T01:intron 35.0%
TATCAATAAACCTCAACCTC+AGG - Chr3:88772927-88772946 None:intergenic 35.0%
TCATGACGATATATGGCTAA+CGG + Chr3:88774985-88775004 MsG0380016865.01.T01:CDS 35.0%
TGAAAGCCTCTTAAAAGACA+GGG - Chr3:88773300-88773319 None:intergenic 35.0%
TGCAGTTAAACAAGGAATAC+TGG + Chr3:88773439-88773458 MsG0380016865.01.T01:intron 35.0%
TGCCTTTGCCTAGTATAAAA+AGG - Chr3:88776965-88776984 None:intergenic 35.0%
TTAAACGAAATGCGATGCTT+AGG - Chr3:88774255-88774274 None:intergenic 35.0%
TTGTTATGTGTTCGTCTATC+AGG - Chr3:88774780-88774799 None:intergenic 35.0%
TTTCTGATGGAAGACATGTT+TGG - Chr3:88773077-88773096 None:intergenic 35.0%
! AAGGGTTCTTATTTCAGTAG+TGG + Chr3:88774068-88774087 MsG0380016865.01.T01:intron 35.0%
! CTATAAGTTACTGGAGTGTT+TGG - Chr3:88777889-88777908 None:intergenic 35.0%
! GAAGTTGGTTGTGTAAAAAG+AGG - Chr3:88775022-88775041 None:intergenic 35.0%
! GATGATACTGATCCTTTTGA+TGG + Chr3:88774618-88774637 MsG0380016865.01.T01:CDS 35.0%
! GTATTCCTTGTTTAACTGCA+AGG - Chr3:88773439-88773458 None:intergenic 35.0%
! TCTGATGATGAACCAATATC+AGG - Chr3:88774409-88774428 None:intergenic 35.0%
! TTGAATTGGTTCATCATTGG+TGG + Chr3:88773938-88773957 MsG0380016865.01.T01:intron 35.0%
! TTGGATGATGATGATGACAT+TGG - Chr3:88772411-88772430 None:intergenic 35.0%
! TTTATACTAGGCAAAGGCAT+TGG + Chr3:88776966-88776985 MsG0380016865.01.T01:intron 35.0%
! TTTGCTTGCATTTGAAGCAA+CGG + Chr3:88772862-88772881 MsG0380016865.01.T01:intron 35.0%
!! AAAATGCACTGATTCTCCAA+TGG - Chr3:88773166-88773185 None:intergenic 35.0%
!! AACATTAAGAGTTGGTTTGG+AGG + Chr3:88773563-88773582 MsG0380016865.01.T01:intron 35.0%
!! ACATTAAGAGTTGGTTTGGA+GGG + Chr3:88773564-88773583 MsG0380016865.01.T01:intron 35.0%
!! GATCTTTCCTCAATTTTTGG+AGG + Chr3:88776339-88776358 MsG0380016865.01.T01:CDS 35.0%
!! TAACTCTTGGCTTTGATGTT+TGG + Chr3:88775706-88775725 MsG0380016865.01.T01:intron 35.0%
!! TTTCCTCAATTTTTGGAGGT+AGG + Chr3:88776343-88776362 MsG0380016865.01.T01:intron 35.0%
!! TTTTTGGAGGTAGGATTTTG+TGG + Chr3:88776352-88776371 MsG0380016865.01.T01:intron 35.0%
!!! TAGTGGATTTTTCTTCTCAG+CGG + Chr3:88774085-88774104 MsG0380016865.01.T01:intron 35.0%
AAAACGGTGAAGAATGAGAG+AGG + Chr3:88772666-88772685 MsG0380016865.01.T01:CDS 40.0%
AAAAGGGTCTTCTGTTGCAT+TGG - Chr3:88774461-88774480 None:intergenic 40.0%
AAATCGTTCATCGTGAGATC+TGG - Chr3:88772336-88772355 None:intergenic 40.0%
AACTCCTGATCATGTTCAAC+AGG - Chr3:88774807-88774826 None:intergenic 40.0%
AAGACACAGTTGTAGGTTTC+TGG - Chr3:88776278-88776297 None:intergenic 40.0%
AGAAAATGAAAGACAGGCTG+TGG + Chr3:88775219-88775238 MsG0380016865.01.T01:CDS 40.0%
AGAACAACAGAGACTTGAGA+GGG + Chr3:88775192-88775211 MsG0380016865.01.T01:CDS 40.0%
AGACAGGGAATGCATGATAT+CGG - Chr3:88773285-88773304 None:intergenic 40.0%
AGCAATGAGGTGATTAGATG+AGG - Chr3:88777551-88777570 None:intergenic 40.0%
AGGCAACCAATAGTAAAGGA+AGG + Chr3:88776626-88776645 MsG0380016865.01.T01:intron 40.0%
AGTACATATTCCCAAGTCAG+AGG + Chr3:88775078-88775097 MsG0380016865.01.T01:CDS 40.0%
ATACTAAAGCGGCTAACTCT+TGG + Chr3:88775693-88775712 MsG0380016865.01.T01:intron 40.0%
ATCTTGGAGGAGTTTGTAAG+GGG + Chr3:88773859-88773878 MsG0380016865.01.T01:intron 40.0%
ATGTGAATCGAAGTTGAGAG+AGG - Chr3:88772460-88772479 None:intergenic 40.0%
ATTGGAAGAGTGAAAGGATC+GGG - Chr3:88772484-88772503 None:intergenic 40.0%
ATTGGCTGAGAAGAATCAAC+GGG + Chr3:88776984-88777003 MsG0380016865.01.T01:CDS 40.0%
CCATATATCGTCATGATCTG+AGG - Chr3:88774981-88775000 None:intergenic 40.0%
CCTCAGATCATGACGATATA+TGG + Chr3:88774978-88774997 MsG0380016865.01.T01:CDS 40.0%
CTCCTTCATGAATGATGATC+AGG + Chr3:88777963-88777982 MsG0380016865.01.T01:intron 40.0%
CTGACACAGATGCATGTATT+GGG - Chr3:88777185-88777204 None:intergenic 40.0%
GAAGAGATCGGAATCATGAT+TGG - Chr3:88772502-88772521 None:intergenic 40.0%
GAATAAAGGGGAGTTAGAGA+AGG + Chr3:88776709-88776728 MsG0380016865.01.T01:intron 40.0%
GAGAAGATCATCAAACGCAA+CGG - Chr3:88772625-88772644 None:intergenic 40.0%
GATGAACCAATATCAGGAGT+GGG - Chr3:88774403-88774422 None:intergenic 40.0%
GATTCCTGTTGAACATGATC+AGG + Chr3:88774800-88774819 MsG0380016865.01.T01:intron 40.0%
GATTGGAAGAGTGAAAGGAT+CGG - Chr3:88772485-88772504 None:intergenic 40.0%
GCCTGTTACCTTTCAAACAA+TGG - Chr3:88773793-88773812 None:intergenic 40.0%
GGAGAATTTCAGGAAGTTGA+AGG + Chr3:88776482-88776501 MsG0380016865.01.T01:CDS 40.0%
TAATCTACTGACGACATTGC+AGG - Chr3:88773465-88773484 None:intergenic 40.0%
TACAACATTGTCCACTGAGT+AGG - Chr3:88777574-88777593 None:intergenic 40.0%
TACAGCCGCTACTGTTAAAA+AGG + Chr3:88778035-88778054 MsG0380016865.01.T01:CDS 40.0%
TACTACAGTGCTCTGTAAAG+AGG - Chr3:88777758-88777777 None:intergenic 40.0%
TATTATGGCCTGAATGTGGT+TGG + Chr3:88777986-88778005 MsG0380016865.01.T01:CDS 40.0%
TGATGAACCAATATCAGGAG+TGG - Chr3:88774404-88774423 None:intergenic 40.0%
TGGACTCCCTTTAGTCAAAT+AGG + Chr3:88773958-88773977 MsG0380016865.01.T01:intron 40.0%
TGGTTGCCTTCCTTTACTAT+TGG - Chr3:88776635-88776654 None:intergenic 40.0%
TTGAAGGGGAAAGTGAAGAA+AGG + Chr3:88776498-88776517 MsG0380016865.01.T01:CDS 40.0%
! AAGTGGTGGAGACACATAAT+TGG + Chr3:88773221-88773240 MsG0380016865.01.T01:intron 40.0%
! ATCATAAACAGGCGAGTTGA+CGG - Chr3:88772571-88772590 None:intergenic 40.0%
! CATATTTGTTGGTGTCTTGC+CGG + Chr3:88773025-88773044 MsG0380016865.01.T01:intron 40.0%
! CATTGGCTGAGAAGAATCAA+CGG + Chr3:88776983-88777002 MsG0380016865.01.T01:CDS 40.0%
! CCGAACATTAAGAGTTGGTT+TGG + Chr3:88773560-88773579 MsG0380016865.01.T01:intron 40.0%
! CTTCTAATGGGTCTGAAAAG+TGG - Chr3:88774528-88774547 None:intergenic 40.0%
! GAAGTTGAGAGAGGAAGTTT+TGG - Chr3:88772451-88772470 None:intergenic 40.0%
! GAATTCGGTTTGAAACCTCA+AGG + Chr3:88772375-88772394 MsG0380016865.01.T01:CDS 40.0%
! GTCATATAATTTGGGACGGA+GGG + Chr3:88776030-88776049 MsG0380016865.01.T01:intron 40.0%
! GTTGCGTTTGATGATCTTCT+CGG + Chr3:88772624-88772643 MsG0380016865.01.T01:CDS 40.0%
! TACCAGCATTTTCATCAGAG+AGG + Chr3:88774655-88774674 MsG0380016865.01.T01:CDS 40.0%
! TGCATTCCCTGTCTTTTAAG+AGG + Chr3:88773291-88773310 MsG0380016865.01.T01:intron 40.0%
! TTTTAGACCCGTCAATTCTC+GGG + Chr3:88774922-88774941 MsG0380016865.01.T01:intron 40.0%
!! ACATTGATTTCAGAGGCTTG+CGG + Chr3:88777333-88777352 MsG0380016865.01.T01:intron 40.0%
!! GTTTTAGACCCGTCAATTCT+CGG + Chr3:88774921-88774940 MsG0380016865.01.T01:intron 40.0%
!! TCTGACTTGGGAATATGTAC+TGG - Chr3:88775079-88775098 None:intergenic 40.0%
!! TCTTTTTATTTGTGACCGGG+TGG + Chr3:88777065-88777084 MsG0380016865.01.T01:intron 40.0%
!!! ACTGATCCTTTTGATGGACT+TGG + Chr3:88774624-88774643 MsG0380016865.01.T01:CDS 40.0%
AAACCATGAGCAGCAGCAAA+AGG + Chr3:88775114-88775133 MsG0380016865.01.T01:CDS 45.0%
AAGAAGGGGAAGTAGGCATT+TGG - Chr3:88774890-88774909 None:intergenic 45.0%
ACAGAAGAGTTAGACCTAGG+AGG - Chr3:88775645-88775664 None:intergenic 45.0%
AGAAAGGCGAAAAGCCAGAT+TGG + Chr3:88776514-88776533 MsG0380016865.01.T01:CDS 45.0%
AGGAGAGAGTCTCTTCTCTA+AGG - Chr3:88776785-88776804 None:intergenic 45.0%
ATATCTGCCCGAGAATTGAC+GGG - Chr3:88774932-88774951 None:intergenic 45.0%
ATGTAGTGAGACTGAACCTG+AGG + Chr3:88772908-88772927 MsG0380016865.01.T01:intron 45.0%
ATTGGTGCAGATTTGCCTTG+AGG - Chr3:88772393-88772412 None:intergenic 45.0%
ATTGGTTAGAGATCGGCCAT+TGG + Chr3:88773147-88773166 MsG0380016865.01.T01:intron 45.0%
CAGGTATTATGGCCTGAATG+TGG + Chr3:88777982-88778001 MsG0380016865.01.T01:intron 45.0%
CAGTTAGAGGAAGAGAAGGA+GGG - Chr3:88772272-88772291 None:intergenic 45.0%
CATATCTGCCCGAGAATTGA+CGG - Chr3:88774933-88774952 None:intergenic 45.0%
CCAATACATGCATCTGTGTC+AGG + Chr3:88777183-88777202 MsG0380016865.01.T01:intron 45.0%
CCTGAACTTGTGTTTGACCA+CGG - Chr3:88774711-88774730 None:intergenic 45.0%
CCTGACACAGATGCATGTAT+TGG - Chr3:88777186-88777205 None:intergenic 45.0%
CCTGATAAAGTGCAGCAGAA+GGG + Chr3:88778087-88778106 MsG0380016865.01.T01:CDS 45.0%
CTCACAGAAGAGTTAGACCT+AGG - Chr3:88775648-88775667 None:intergenic 45.0%
CTCAGTAACCACACCTTTGA+CGG - Chr3:88772743-88772762 None:intergenic 45.0%
GAGAACAACAGAGACTTGAG+AGG + Chr3:88775191-88775210 MsG0380016865.01.T01:CDS 45.0%
GAGTTTCATCAAGCGCCATA+TGG + Chr3:88774822-88774841 MsG0380016865.01.T01:intron 45.0%
GGCAAAGAAAAGGGCTGAAA+AGG + Chr3:88775402-88775421 MsG0380016865.01.T01:CDS 45.0%
GGTAGCGTATGATCTAGTGA+AGG + Chr3:88772883-88772902 MsG0380016865.01.T01:intron 45.0%
GGTAGCTTAAAACGGACCTA+TGG + Chr3:88774153-88774172 MsG0380016865.01.T01:intron 45.0%
GGTCAAACACAAGTTCAGGT+TGG + Chr3:88774712-88774731 MsG0380016865.01.T01:CDS 45.0%
GTCCTCTCTGATGAAAATGC+TGG - Chr3:88774660-88774679 None:intergenic 45.0%
GTGCAAATTAGCGGAGAACT+CGG - Chr3:88777267-88777286 None:intergenic 45.0%
TCAGCAGTTAGAGGAAGAGA+AGG - Chr3:88772276-88772295 None:intergenic 45.0%
TCAGTAACCACACCTTTGAC+GGG - Chr3:88772742-88772761 None:intergenic 45.0%
TCATCGTGAGATCTGGTGAA+CGG - Chr3:88772329-88772348 None:intergenic 45.0%
TCATTCGCTCTGCTCATTAC+AGG + Chr3:88777624-88777643 MsG0380016865.01.T01:intron 45.0%
TCCTGAAATTCTCCAGCTGA+GGG - Chr3:88776476-88776495 None:intergenic 45.0%
TCCTGATAAAGTGCAGCAGA+AGG + Chr3:88778086-88778105 MsG0380016865.01.T01:CDS 45.0%
TCTGCTCTCTTTGAGTCTGT+AGG - Chr3:88777011-88777030 None:intergenic 45.0%
TGAATCGTTCTTCAGCGTGA+GGG + Chr3:88775596-88775615 MsG0380016865.01.T01:intron 45.0%
TGAGGATGAATCAGTTGGAG+CGG - Chr3:88774503-88774522 None:intergenic 45.0%
TGATGCACAATTTCAGCCAG+AGG + Chr3:88776248-88776267 MsG0380016865.01.T01:CDS 45.0%
TGCTGCTGAGGCAAAGAAAA+GGG + Chr3:88775393-88775412 MsG0380016865.01.T01:CDS 45.0%
TTCCTGAAATTCTCCAGCTG+AGG - Chr3:88776477-88776496 None:intergenic 45.0%
TTGAATCGTTCTTCAGCGTG+AGG + Chr3:88775595-88775614 MsG0380016865.01.T01:intron 45.0%
TTGTGTTTGACCACGGTGTT+GGG - Chr3:88774704-88774723 None:intergenic 45.0%
! CGTCATATAATTTGGGACGG+AGG + Chr3:88776029-88776048 MsG0380016865.01.T01:intron 45.0%
! GAGTTCTCCGCTAATTTGCA+CGG + Chr3:88777266-88777285 MsG0380016865.01.T01:intron 45.0%
! GGAGTTTGTAAGGGGTACAT+AGG + Chr3:88773867-88773886 MsG0380016865.01.T01:intron 45.0%
! GTGAAGAATGAGAGAGGTGT+CGG + Chr3:88772672-88772691 MsG0380016865.01.T01:CDS 45.0%
! TCAGAGAGGACTAGCAGATA+TGG + Chr3:88774669-88774688 MsG0380016865.01.T01:CDS 45.0%
! TTGGGAATATGTACTGGTCG+AGG - Chr3:88775073-88775092 None:intergenic 45.0%
!! GGACTTTGAAGTTAAGCGCT+GGG + Chr3:88777363-88777382 MsG0380016865.01.T01:CDS 45.0%
!! GTAGGTTTCTGGTTTACCTC+TGG - Chr3:88776267-88776286 None:intergenic 45.0%
!! TGGACTTTGAAGTTAAGCGC+TGG + Chr3:88777362-88777381 MsG0380016865.01.T01:CDS 45.0%
AAAAGGCTGCTGCAGGGAAA+AGG + Chr3:88775419-88775438 MsG0380016865.01.T01:CDS 50.0%
AAGCTAGAGTGCGTGCTGAA+AGG + Chr3:88775329-88775348 MsG0380016865.01.T01:CDS 50.0%
ACAAGCTGAAGCCCGTGAAA+GGG + Chr3:88775369-88775388 MsG0380016865.01.T01:CDS 50.0%
ACCTCATTGCTCCTACTCAG+TGG + Chr3:88777560-88777579 MsG0380016865.01.T01:intron 50.0%
ACGGTGGTTTCTTCCGTCTA+CGG - Chr3:88772310-88772329 None:intergenic 50.0%
ACTGCTTCTCTCCTCTGACT+TGG - Chr3:88775092-88775111 None:intergenic 50.0%
AGCATAAGGCAGCAAACCCT+GGG - Chr3:88777464-88777483 None:intergenic 50.0%
AGCTAGAGTGCGTGCTGAAA+GGG + Chr3:88775330-88775349 MsG0380016865.01.T01:CDS 50.0%
AGGGTCTTCTGTTGCATTGG+AGG - Chr3:88774458-88774477 None:intergenic 50.0%
ATAGCAAGTCCTCCCGTCAA+AGG + Chr3:88772727-88772746 MsG0380016865.01.T01:CDS 50.0%
CACGTGTCAGTGTCAAACAC+CGG - Chr3:88773047-88773066 None:intergenic 50.0%
CAGATTGGAACGCCTTCAGA+GGG + Chr3:88776529-88776548 MsG0380016865.01.T01:CDS 50.0%
CAGGGAATGCATGATATCGG+TGG - Chr3:88773282-88773301 None:intergenic 50.0%
CCCTTCTGCTGCACTTTATC+AGG - Chr3:88778090-88778109 None:intergenic 50.0%
CCGTGGTCAAACACAAGTTC+AGG + Chr3:88774708-88774727 MsG0380016865.01.T01:CDS 50.0%
CCTCTTTACGACGACGATGA+CGG + Chr3:88772594-88772613 MsG0380016865.01.T01:CDS 50.0%
CTGCTGCTGAGGCAAAGAAA+AGG + Chr3:88775392-88775411 MsG0380016865.01.T01:CDS 50.0%
CTGCTTCTCTCCTCTGACTT+GGG - Chr3:88775091-88775110 None:intergenic 50.0%
CTGTATGAGCAGAAACCACC+CGG - Chr3:88777083-88777102 None:intergenic 50.0%
CTTGTGTTTGACCACGGTGT+TGG - Chr3:88774705-88774724 None:intergenic 50.0%
GAATCGTTCTTCAGCGTGAG+GGG + Chr3:88775597-88775616 MsG0380016865.01.T01:intron 50.0%
GCAGTTAGAGGAAGAGAAGG+AGG - Chr3:88772273-88772292 None:intergenic 50.0%
GGCTGCTTCAAGATTCACGA+AGG - Chr3:88777868-88777887 None:intergenic 50.0%
TAGCATAAGGCAGCAAACCC+TGG - Chr3:88777465-88777484 None:intergenic 50.0%
TCCACTGAGTAGGAGCAATG+AGG - Chr3:88777564-88777583 None:intergenic 50.0%
TCCCTCAGCTGGAGAATTTC+AGG + Chr3:88776472-88776491 MsG0380016865.01.T01:intron 50.0%
TGAGACTGAACCTGAGGTTG+AGG + Chr3:88772914-88772933 MsG0380016865.01.T01:intron 50.0%
TGAGCAGCAGCAAAAGGAGA+TGG + Chr3:88775120-88775139 MsG0380016865.01.T01:CDS 50.0%
TGGCCTGAGGATGAATCAGT+TGG - Chr3:88774508-88774527 None:intergenic 50.0%
TTTCTTCCGTCTACGGTGGT+CGG - Chr3:88772303-88772322 None:intergenic 50.0%
! AGAACGTGCTGCTGTGGAAA+GGG + Chr3:88775503-88775522 MsG0380016865.01.T01:intron 50.0%
! ATATGTACTGGTCGAGGAGG+AGG - Chr3:88775067-88775086 None:intergenic 50.0%
! GATGATCTTCTCGGCGGATT+CGG + Chr3:88772633-88772652 MsG0380016865.01.T01:CDS 50.0%
! GCGTTTGATGATCTTCTCGG+CGG + Chr3:88772627-88772646 MsG0380016865.01.T01:CDS 50.0%
! GCTCCAACTGATTCATCCTC+AGG + Chr3:88774502-88774521 MsG0380016865.01.T01:CDS 50.0%
! GGAATATGTACTGGTCGAGG+AGG - Chr3:88775070-88775089 None:intergenic 50.0%
! TAAAGCAGAACGTGCTGCTG+TGG + Chr3:88775497-88775516 MsG0380016865.01.T01:intron 50.0%
! TCTCCTTTTGCTGCTGCTCA+TGG - Chr3:88775120-88775139 None:intergenic 50.0%
! TGTGTTTGACCACGGTGTTG+GGG - Chr3:88774703-88774722 None:intergenic 50.0%
! TTTGAAGCATCTCCCTCAGC+TGG + Chr3:88776461-88776480 MsG0380016865.01.T01:intron 50.0%
!! GAGTTGGTTTGGAGGGAAAG+AGG + Chr3:88773571-88773590 MsG0380016865.01.T01:intron 50.0%
AAGTCCTCCCGTCAAAGGTG+TGG + Chr3:88772732-88772751 MsG0380016865.01.T01:intron 55.0%
ACTGCCTGCCAACCACATTC+AGG - Chr3:88777997-88778016 None:intergenic 55.0%
AGCAGCTGCAGCTCTTTCTC+GGG - Chr3:88775541-88775560 None:intergenic 55.0%
AGCTCGCCAAAGAGCTGAGA+AGG + Chr3:88775282-88775301 MsG0380016865.01.T01:CDS 55.0%
AGCTTGTGCCCTCTGAACAG+CGG - Chr3:88775356-88775375 None:intergenic 55.0%
ATGGCCTGAATGTGGTTGGC+AGG + Chr3:88777990-88778009 MsG0380016865.01.T01:CDS 55.0%
CACAAGCTGAAGCCCGTGAA+AGG + Chr3:88775368-88775387 MsG0380016865.01.T01:CDS 55.0%
CACAGGCCCACTCCTGATAT+TGG + Chr3:88774394-88774413 MsG0380016865.01.T01:intron 55.0%
CAGCAGCCTTCTCAGCTCTT+TGG - Chr3:88775291-88775310 None:intergenic 55.0%
CAGCAGCTGCAGCTCTTTCT+CGG - Chr3:88775542-88775561 None:intergenic 55.0%
CCAGATTGGAACGCCTTCAG+AGG + Chr3:88776528-88776547 MsG0380016865.01.T01:CDS 55.0%
CCGTCATCGTCGTCGTAAAG+AGG - Chr3:88772597-88772616 None:intergenic 55.0%
GACGGACATGGAAGCGAAAC+CGG - Chr3:88772553-88772572 None:intergenic 55.0%
GAGAAAGAGCTGCAGCTGCA+AGG + Chr3:88775454-88775473 MsG0380016865.01.T01:intron 55.0%
GAGTTAGACCTAGGAGGCCT+TGG - Chr3:88775639-88775658 None:intergenic 55.0%
GCAGCAGCAAAAGGAGATGG+AGG + Chr3:88775123-88775142 MsG0380016865.01.T01:CDS 55.0%
GTAACCACACCTTTGACGGG+AGG - Chr3:88772739-88772758 None:intergenic 55.0%
GTAGGCATTTGGCCAGCTAC+TGG - Chr3:88774879-88774898 None:intergenic 55.0%
GTCGGTGGATCAGCAGTTAG+AGG - Chr3:88772285-88772304 None:intergenic 55.0%
GTGGTTTCTTCCGTCTACGG+TGG - Chr3:88772307-88772326 None:intergenic 55.0%
TCAGAGGCTTGCGGAAACAC+TGG + Chr3:88777342-88777361 MsG0380016865.01.T01:intron 55.0%
TCGTGAGATCTGGTGAACGG+TGG - Chr3:88772326-88772345 None:intergenic 55.0%
TGAAAGGGCCGCTGTTCAGA+GGG + Chr3:88775345-88775364 MsG0380016865.01.T01:CDS 55.0%
TGGGTCTGAAAAGTGGCCTG+AGG - Chr3:88774521-88774540 None:intergenic 55.0%
! AACAGGCGAGTTGACGGACA+TGG - Chr3:88772565-88772584 None:intergenic 55.0%
! CAGAACGTGCTGCTGTGGAA+AGG + Chr3:88775502-88775521 MsG0380016865.01.T01:intron 55.0%
! TGACCACGGTGTTGGGGAAT+CGG - Chr3:88774697-88774716 None:intergenic 55.0%
!! AAGTTAAGCGCTGGGCTGCA+GGG + Chr3:88777371-88777390 MsG0380016865.01.T01:CDS 55.0%
!! CAAGTGTCGGCGTGTGAGTA+TGG - Chr3:88772971-88772990 None:intergenic 55.0%
!! CCTCTGAAGGCGTTCCAATC+TGG - Chr3:88776531-88776550 None:intergenic 55.0%
!! GAAGGTGGTGGAGCAGAAGT+TGG - Chr3:88775037-88775056 None:intergenic 55.0%
AGGGCTGAAAAGGCTGCTGC+AGG + Chr3:88775412-88775431 MsG0380016865.01.T01:CDS 60.0%
ATAGCGCTCCAAGGCCTCCT+AGG + Chr3:88775628-88775647 MsG0380016865.01.T01:intron 60.0%
CCCATCTCTCGTAGCACCTC+CGG + Chr3:88772531-88772550 MsG0380016865.01.T01:CDS 60.0%
CCTCAGCAGCAGCCCTTTCA+CGG - Chr3:88775384-88775403 None:intergenic 60.0%
CGTTCTTCAGCGTGAGGGGA+CGG + Chr3:88775601-88775620 MsG0380016865.01.T01:intron 60.0%
CTCAGCAGCAGCCCTTTCAC+GGG - Chr3:88775383-88775402 None:intergenic 60.0%
CTGAAAGGGCCGCTGTTCAG+AGG + Chr3:88775344-88775363 MsG0380016865.01.T01:CDS 60.0%
GATCCACCGACCACCGTAGA+CGG + Chr3:88772294-88772313 MsG0380016865.01.T01:five_prime_UTR 60.0%
GGACATGGAAGCGAAACCGG+AGG - Chr3:88772550-88772569 None:intergenic 60.0%
GGGCTGAAAAGGCTGCTGCA+GGG + Chr3:88775413-88775432 MsG0380016865.01.T01:CDS 60.0%
GTTCTTCAGCGTGAGGGGAC+GGG + Chr3:88775602-88775621 MsG0380016865.01.T01:intron 60.0%
TGTGGAAAGGGCTGCTGCAG+AGG + Chr3:88775515-88775534 MsG0380016865.01.T01:intron 60.0%
! AGGAGGCCTTGGAGCGCTAT+TGG - Chr3:88775628-88775647 None:intergenic 60.0%
! CGAGGAGGAGGTGGTCTTGA+AGG - Chr3:88775055-88775074 None:intergenic 60.0%
! GGAGGAGGTGGTCTTGAAGG+TGG - Chr3:88775052-88775071 None:intergenic 60.0%
! GGAGGTGGTCTTGAAGGTGG+TGG - Chr3:88775049-88775068 None:intergenic 60.0%
! TGTACTGGTCGAGGAGGAGG+TGG - Chr3:88775064-88775083 None:intergenic 60.0%
!! ACCGGAGGTGCTACGAGAGA+TGG - Chr3:88772535-88772554 None:intergenic 60.0%
!! CCGGAGGTGCTACGAGAGAT+GGG - Chr3:88772534-88772553 None:intergenic 60.0%
!! GAAGTTAAGCGCTGGGCTGC+AGG + Chr3:88777370-88777389 MsG0380016865.01.T01:CDS 60.0%
CCGTGAAAGGGCTGCTGCTG+AGG + Chr3:88775381-88775400 MsG0380016865.01.T01:CDS 65.0%
CGCTGGGCTGCAGGGAAAGA+GGG + Chr3:88777379-88777398 MsG0380016865.01.T01:CDS 65.0%
CTTCCGTCTACGGTGGTCGG+TGG - Chr3:88772300-88772319 None:intergenic 65.0%
GACGGGCCAATAGCGCTCCA+AGG + Chr3:88775619-88775638 MsG0380016865.01.T01:intron 65.0%
GCTGGGCTGCAGGGAAAGAG+GGG + Chr3:88777380-88777399 MsG0380016865.01.T01:CDS 65.0%
GGAACGCCTTCAGAGGGCTC+AGG + Chr3:88776535-88776554 MsG0380016865.01.T01:CDS 65.0%
!! GCACCGATTCCCCAACACCG+TGG + Chr3:88774691-88774710 MsG0380016865.01.T01:CDS 65.0%
CGCGCTCCTGAGCCCTCTGA+AGG - Chr3:88776544-88776563 None:intergenic 70.0%
GCGCTGGGCTGCAGGGAAAG+AGG + Chr3:88777378-88777397 MsG0380016865.01.T01:CDS 70.0%
! TCAGAGGGCTCAGGAGCGCG+CGG + Chr3:88776544-88776563 MsG0380016865.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 88772195 88778230 88772195 ID=MsG0380016865.01;Name=MsG0380016865.01
Chr3 mRNA 88772195 88778230 88772195 ID=MsG0380016865.01.T01;Parent=MsG0380016865.01;Name=MsG0380016865.01.T01;_AED=0.43;_eAED=0.43;_QI=150|0.62|0.55|1|1|1|9|0|661
Chr3 exon 88772195 88772748 88772195 ID=MsG0380016865.01.T01:exon:12216;Parent=MsG0380016865.01.T01
Chr3 exon 88774399 88774767 88774399 ID=MsG0380016865.01.T01:exon:12217;Parent=MsG0380016865.01.T01
Chr3 exon 88774928 88775440 88774928 ID=MsG0380016865.01.T01:exon:12218;Parent=MsG0380016865.01.T01
Chr3 exon 88775524 88775611 88775524 ID=MsG0380016865.01.T01:exon:12219;Parent=MsG0380016865.01.T01
Chr3 exon 88776237 88776360 88776237 ID=MsG0380016865.01.T01:exon:12220;Parent=MsG0380016865.01.T01
Chr3 exon 88776480 88776565 88776480 ID=MsG0380016865.01.T01:exon:12221;Parent=MsG0380016865.01.T01
Chr3 exon 88776976 88777041 88776976 ID=MsG0380016865.01.T01:exon:12222;Parent=MsG0380016865.01.T01
Chr3 exon 88777346 88777435 88777346 ID=MsG0380016865.01.T01:exon:12223;Parent=MsG0380016865.01.T01
Chr3 exon 88777985 88778230 88777985 ID=MsG0380016865.01.T01:exon:12224;Parent=MsG0380016865.01.T01
Chr3 five_prime_UTR 88772195 88772344 88772195 ID=MsG0380016865.01.T01:five_prime_utr;Parent=MsG0380016865.01.T01
Chr3 CDS 88772345 88772748 88772345 ID=MsG0380016865.01.T01:cds;Parent=MsG0380016865.01.T01
Chr3 CDS 88774399 88774767 88774399 ID=MsG0380016865.01.T01:cds;Parent=MsG0380016865.01.T01
Chr3 CDS 88774928 88775440 88774928 ID=MsG0380016865.01.T01:cds;Parent=MsG0380016865.01.T01
Chr3 CDS 88775524 88775611 88775524 ID=MsG0380016865.01.T01:cds;Parent=MsG0380016865.01.T01
Chr3 CDS 88776237 88776360 88776237 ID=MsG0380016865.01.T01:cds;Parent=MsG0380016865.01.T01
Chr3 CDS 88776480 88776565 88776480 ID=MsG0380016865.01.T01:cds;Parent=MsG0380016865.01.T01
Chr3 CDS 88776976 88777041 88776976 ID=MsG0380016865.01.T01:cds;Parent=MsG0380016865.01.T01
Chr3 CDS 88777346 88777435 88777346 ID=MsG0380016865.01.T01:cds;Parent=MsG0380016865.01.T01
Chr3 CDS 88777985 88778230 88777985 ID=MsG0380016865.01.T01:cds;Parent=MsG0380016865.01.T01
Gene Sequence

>MsG0380016865.01.T01

ATGAACGATTTCGATCGTTTATTAGCTACTGAATTCGGTTTGAAACCTCAAGGCAAATCTGCACCAATGTCATCATCATCATCCAAAGGATCTTACAATTTCACCAAAACTTCCTCTCTCAACTTCGATTCACATTCCCGATCCTTTCACTCTTCCAATCATGATTCCGATCTCTTCAATTCTAATCCCATCTCTCGTAGCACCTCCGGTTTCGCTTCCATGTCCGTCAACTCGCCTGTTTATGATAAACCTCTTTACGACGACGATGACGGAAGTGCCGTTGCGTTTGATGATCTTCTCGGCGGATTCGGTCATTCGAAGAAAACGGTGAAGAATGAGAGAGGTGTCGGTGATTTTGATGATTTGATCAATGGATTTGGGAATAGCAAGTCCTCCCGTCAAAGGCCCACTCCTGATATTGGTTCATCATCAGAATCTACTTTCAGTGCATCTAAAACAACCTCCAATGCAACAGAAGACCCTTTTAAAATATTTGAATCAGCTTCCGCTCCAACTGATTCATCCTCAGGCCACTTTTCAGACCCATTAGAAGAGATTAGTAAATTTACTAGTTCTAAAAGCACAAAAATGATAGTTCATCAAATTCTAATGGTGCAGTATATGATGATACTGATCCTTTTGATGGACTTGGAAATTCAGTACCAGCATTTTCATCAGAGAGGACTAGCAGATATGGCACCGATTCCCCAACACCGTGGTCAAACACAAGTTCAGGTTGGACCAGAGATAAAGAATCAATTGAAAAATTGTCTACCCGTCAATTCTCGGGCAGATATGTCTCCAAAATATGAAGAAAAGTTGGCCTCAGATCATGACGATATATGGCTAACGGTATCAGAGATTCCTCTTTTTACACAACCAACTTCTGCTCCACCACCTTCAAGACCACCTCCTCCTCGACCAGTACATATTCCCAAGTCAGAGGAGAGAAGCAGTTCAAACCATGAGCAGCAGCAAAAGGAGATGGAGGATAGAGAGCAAAGAAGAATTGAAAGGGAAAGGAAGGAGAAAGAAAGAGAACAACAGAGACTTGAGAGGGAAAGAGAAAATGAAAGACAGGCTGTGGAAAGAGCTACTAGAGAAGCACGTGAAAGAGCAGCTGCTGAAGCTCGCCAAAGAGCTGAGAAGGCTGCTGTTGAGAAAGCTAATGCAGAAGCTAGAGTGCGTGCTGAAAGGGCCGCTGTTCAGAGGGCACAAGCTGAAGCCCGTGAAAGGGCTGCTGCTGAGGCAAAGAAAAGGGCTGAAAAGGCTGCTGCAGGGAAAAGGGCTGCTGCAGAGGCCCGAGAAAGAGCTGCAGCTGCTGCAAGAATGTACCAGCAAAAAAATGAAAATGATCTTGAATCGTTCTTCAGCGATTCAGTTTTTGATGCACAATTTCAGCCAGAGGTAAACCAGAAACCTACAACTGTGTCTTCAAACATAAAGAGGGCACCATCATCACCTAATATTGTTGATGATCTTTCCTCAATTTTTGGAGCTGGAGAATTTCAGGAAGTTGAAGGGGAAAGTGAAGAAAGGCGAAAAGCCAGATTGGAACGCCTTCAGAGGGCTCAGGAGCGCGCGGCAAAGGCATTGGCTGAGAAGAATCAACGGGACCTACAGACTCAAAGAGAGCAGAATGAGAGACATAGGCTTGCGGAAACACTGGACTTTGAAGTTAAGCGCTGGGCTGCAGGGAAAGAGGGGAACTTGCGTGCTCTACTCTCCACCTTACAATATGTATTATGGCCTGAATGTGGTTGGCAGGCAGTTTCTTTGACTGATCTTATTACAGCCGCTACTGTTAAAAAGGCTTATAGAAAAGCTACACTGTGCATTCATCCTGATAAAGTGCAGCAGAAGGGTGCCACTCTTCAGCAGAAATATATTGCAGAAAAGGTTTTCGATCTACTAAAGTATTTGAGTCCTTTCTATACATTTCTTTCTAATGAATACTTTATAAAGAAAGAAATGATTGCCAGTTGA
Protein sequence

>MsG0380016865.01.T01

MNDFDRLLATEFGLKPQGKSAPMSSSSSKGSYNFTKTSSLNFDSHSRSFHSSNHDSDLFNSNPISRSTSGFASMSVNSPVYDKPLYDDDDGSAVAFDDLLGGFGHSKKTVKNERGVGDFDDLINGFGNSKSSRQRPTPDIGSSSESTFSASKTTSNATEDPFKIFESASAPTDSSSGHFSDPLEEISKFTSSKSTKMIVHQILMVQYMMILILLMDLEIQYQHFHQRGLADMAPIPQHRGQTQVQVGPEIKNQLKNCLPVNSRADMSPKYEEKLASDHDDIWLTVSEIPLFTQPTSAPPPSRPPPPRPVHIPKSEERSSSNHEQQQKEMEDREQRRIERERKEKEREQQRLERERENERQAVERATREARERAAAEARQRAEKAAVEKANAEARVRAERAAVQRAQAEARERAAAEAKKRAEKAAAGKRAAAEARERAAAAARMYQQKNENDLESFFSDSVFDAQFQPEVNQKPTTVSSNIKRAPSSPNIVDDLSSIFGAGEFQEVEGESEERRKARLERLQRAQERAAKALAEKNQRDLQTQREQNERHRLAETLDFEVKRWAAGKEGNLRALLSTLQYVLWPECGWQAVSLTDLITAATVKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKYLSPFYTFLSNEYFIKKEMIAS*