AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1038080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038080 MtrunA17_Chr7g0274541 95.574 723 9 2 1 701 1 722 0.0 1419
Msa1038080 MtrunA17_Chr6g0459461 82.301 113 18 1 1 111 91 203 1.85e-55 189
Msa1038080 MtrunA17_Chr6g0459471 93.651 63 4 0 631 693 1 63 4.41e-34 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038080 AT2G34970.1 61.188 724 238 8 1 692 1 713 0.0 872
Msa1038080 AT4G18300.1 56.768 724 258 14 1 692 1 701 0.0 776
Msa1038080 AT3G02270.1 53.909 729 250 15 1 697 1 675 0.0 716

Find 172 sgRNAs with CRISPR-Local

Find 710 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGGCCTCCTTCACATTT+TGG 0.127019 7_1:-74897866 None:intergenic
GTACCAGATGTTATGAATTT+TGG 0.128972 7_1:+74894315 Msa1038080:CDS
CTTCGTGTTCTTGCCAATTT+TGG 0.166436 7_1:-74894758 None:intergenic
AAGATACTCACTTGAATTAA+TGG 0.203717 7_1:-74900877 None:intergenic
GGAAGTATTCTTCCACCTTC+TGG 0.225473 7_1:+74897983 Msa1038080:CDS
TATTACTGAAGATAAAATTT+TGG 0.227298 7_1:+74897916 Msa1038080:CDS
AGAAACTGCTTCTGAATTAT+TGG 0.228648 7_1:+74896882 Msa1038080:CDS
GCTTGTTCGTGTTCCGTTAC+AGG 0.244182 7_1:+74889898 Msa1038080:CDS
GAAGCAGGTGATTAACTATT+TGG 0.248892 7_1:+74891305 Msa1038080:CDS
ATAGGATCTGGCACCAAAAT+TGG 0.250898 7_1:+74894745 Msa1038080:CDS
GTTGGCCCATTCTCTGTTAT+AGG 0.251239 7_1:+74894727 Msa1038080:CDS
ATAGTTGTTACAGTAAAATT+AGG 0.269459 7_1:-74891351 None:intergenic
AGTCAAAATTGTCTGTAAAT+AGG 0.286591 7_1:-74893692 None:intergenic
ATTTAGAGAAACACCAGTTT+TGG 0.292797 7_1:+74901206 Msa1038080:three_prime_UTR
TTATATTTCTTTCAGATAAT+GGG 0.293378 7_1:+74894180 Msa1038080:intron
TTCGTCTTCATCGTCTTCTT+CGG 0.298425 7_1:-74901028 None:intergenic
TGTACTTACCAAGTGGAAAA+AGG 0.300815 7_1:+74899831 Msa1038080:CDS
TACAAAAGTTGCTTGGTATT+AGG 0.305309 7_1:-74893096 None:intergenic
AGTAGAGATACTTGTGAATA+AGG 0.319455 7_1:-74895421 None:intergenic
AAAGCTCACCAGCTGAACTA+TGG 0.322453 7_1:-74899064 None:intergenic
ATAATAAAGCCTATTTCTAT+TGG 0.322638 7_1:-74901279 None:intergenic
AAAATTTGAAGAAATGTGTT+TGG 0.336103 7_1:+74900148 Msa1038080:CDS
TTGGTGGGGCTGGTTATGTT+TGG 0.339452 7_1:+74897843 Msa1038080:CDS
TCGTCTTCATCGTCTTCTTC+GGG 0.349579 7_1:-74901027 None:intergenic
TCATGTTTCCAGGTTGTAGT+TGG 0.360879 7_1:+74895379 Msa1038080:intron
CACTAGAGAGCGCCAGAGTT+TGG 0.361839 7_1:-74889362 None:intergenic
TCATCGTCATCTGAATCATT+AGG 0.362858 7_1:-74898022 None:intergenic
ACATAGAGGGATGCTATATA+TGG 0.363209 7_1:+74894830 Msa1038080:CDS
CCATTCTCTGTTATAGGATC+TGG 0.364215 7_1:+74894733 Msa1038080:CDS
AAGTTCACAGCCATCTTCTA+TGG 0.377775 7_1:-74894863 None:intergenic
GAAGTATTCTTCCACCTTCT+GGG 0.385133 7_1:+74897984 Msa1038080:CDS
GTCAATGTGTAATTTATCAT+TGG 0.388585 7_1:-74891228 None:intergenic
TAAAATACATGACCCAAAAC+TGG 0.392182 7_1:-74901219 None:intergenic
GTCGGAGTAGGATGCAAAAT+CGG 0.392986 7_1:+74894796 Msa1038080:CDS
GTAAATAGGCTAAGGACTTC+CGG 0.402526 7_1:-74893678 None:intergenic
TGTCGAGGTGCTGTCATCTT+GGG 0.403227 7_1:+74901088 Msa1038080:three_prime_UTR
AGTTGAATGGCAAAAGGGAT+TGG 0.406087 7_1:-74901353 None:intergenic
GAAAGCTATGGAAGATGAAC+TGG 0.408041 7_1:+74897946 Msa1038080:CDS
CCGGAACAAACCTCTGAAGC+AGG 0.410804 7_1:-74896919 None:intergenic
TCATCTGAATCATTAGGATT+AGG 0.423207 7_1:-74898016 None:intergenic
ATGGCTCATTTAAAGTTGAA+TGG 0.431165 7_1:-74901366 None:intergenic
CTAAAATAAGAGACAAGAAA+AGG 0.432716 7_1:-74889256 None:intergenic
ATTTAAAGTTGAATGGCAAA+AGG 0.433487 7_1:-74901359 None:intergenic
CTGCTGTGCTCATGCGAAGC+AGG 0.446859 7_1:+74891290 Msa1038080:CDS
CCTCAAAACGGTATCGTTTG+AGG 0.447417 7_1:+74889317 Msa1038080:five_prime_UTR
TTGTCGAGGTGCTGTCATCT+TGG 0.447642 7_1:+74901087 Msa1038080:three_prime_UTR
CATGTTTCCAGGTTGTAGTT+GGG 0.449794 7_1:+74895380 Msa1038080:intron
TTGCCAAAATTCATAACATC+TGG 0.452105 7_1:-74894318 None:intergenic
TAAAATAAGAGACAAGAAAA+GGG 0.452128 7_1:-74889255 None:intergenic
CAAGCACAATCAGCTGTTGT+TGG 0.455052 7_1:+74894709 Msa1038080:CDS
TCGTCGCTATCTTCCTCAAC+CGG 0.456281 7_1:-74895451 None:intergenic
CCAGATCCTATAACAGAGAA+TGG 0.458173 7_1:-74894733 None:intergenic
CTCTCTGCACCATGACAAGC+AGG 0.458401 7_1:+74893194 Msa1038080:CDS
TCGGAGTAGGATGCAAAATC+GGG 0.464129 7_1:+74894797 Msa1038080:CDS
CTTGAATTAATGGTTGAGCT+TGG 0.472089 7_1:-74900867 None:intergenic
AATTGACTTCTAAAGTCAAA+TGG 0.473008 7_1:-74898202 None:intergenic
TAATGACCATGGTTATTAAA+CGG 0.473067 7_1:+74893007 Msa1038080:CDS
ATATTTATTACCAAGAAAAT+GGG 0.473836 7_1:+74889830 Msa1038080:intron
TTTCCAGGTTGTAGTTGGGC+AGG 0.474402 7_1:+74895384 Msa1038080:intron
GCAAGGATATAATTCATAGA+TGG 0.481776 7_1:+74894280 Msa1038080:CDS
AAGCTCACCAGCTGAACTAT+GGG 0.483922 7_1:-74899063 None:intergenic
CAAAAGACGCACCGTAGAGA+GGG 0.484783 7_1:-74889457 None:intergenic
TTTAAAGTTGAATGGCAAAA+GGG 0.489246 7_1:-74901358 None:intergenic
TCTACTACAGCAGCCGGTTG+AGG 0.489304 7_1:+74895438 Msa1038080:CDS
CTCAAAACGGTATCGTTTGA+GGG 0.493495 7_1:+74889318 Msa1038080:five_prime_UTR
TTTGGAGGCAATGAAAGCTA+TGG 0.494317 7_1:+74897934 Msa1038080:CDS
GACTTGCCCCATAGTTCAGC+TGG 0.494761 7_1:+74899056 Msa1038080:CDS
TTAAATTCCGTCGTCGGAGT+AGG 0.496201 7_1:+74894784 Msa1038080:CDS
TGAGAAGAAAGGCGCGGATG+AGG 0.496216 7_1:+74900825 Msa1038080:CDS
AAACCCTACACCCTTCTCTT+CGG 0.501045 7_1:+74889413 Msa1038080:five_prime_UTR
GATAAAGCAGACTTCTCAAA+AGG 0.505881 7_1:+74893126 Msa1038080:CDS
AAGATAGCTGCTGATTGTGC+TGG 0.506462 7_1:+74898999 Msa1038080:CDS
TTGGGGCGTTCAAGAGTGAT+AGG 0.508515 7_1:-74889959 None:intergenic
CAAGGAATATACCGTGGCTC+GGG 0.510114 7_1:+74894363 Msa1038080:CDS
TTACAGTATCTCCACTGATA+AGG 0.511096 7_1:-74892918 None:intergenic
CTTATCCACTGTGCTGGTGA+TGG 0.511806 7_1:-74896851 None:intergenic
CTCGTAATACAAAAGTTGCT+TGG 0.522774 7_1:-74893103 None:intergenic
TCCGTTACAGGCGATTCTGT+TGG 0.523711 7_1:+74889910 Msa1038080:CDS
AAGAGATGACTTTGACAAAG+AGG 0.524902 7_1:+74898057 Msa1038080:CDS
TTTGCATCCTACTCCGACGA+CGG 0.525897 7_1:-74894791 None:intergenic
TAGAAGATGGCTGTGAACTT+AGG 0.527350 7_1:+74894866 Msa1038080:CDS
CGATCGCGTTTCCGAAGAGA+AGG 0.527457 7_1:-74889424 None:intergenic
AGTTGGGAAGATGAGAAGAA+AGG 0.528430 7_1:+74900814 Msa1038080:CDS
ATCTGACTTATCCACTGTGC+TGG 0.528457 7_1:-74896857 None:intergenic
CGGTACCAAGTCGAGACTGA+TGG 0.534696 7_1:-74893050 None:intergenic
AGTCGAGACTGATGGATAGC+TGG 0.535756 7_1:-74893042 None:intergenic
TTCTCAACCTAGCCAAACTC+TGG 0.538280 7_1:+74889350 Msa1038080:five_prime_UTR
CATAGAGGGATGCTATATAT+GGG 0.540737 7_1:+74894831 Msa1038080:CDS
ACAAAAGACGCACCGTAGAG+AGG 0.543747 7_1:-74889458 None:intergenic
CACCGAAGAAAAGCGCTGCT+AGG 0.545842 7_1:+74889855 Msa1038080:CDS
TCTGAATGATACGGACGAGC+AGG 0.546245 7_1:+74899867 Msa1038080:CDS
AGAATCACACTTGAATTCAA+AGG 0.549859 7_1:-74901143 None:intergenic
AAGGAGGCCATGAGGAAGAG+TGG 0.549988 7_1:+74897876 Msa1038080:CDS
ACCGAAGAAAAGCGCTGCTA+GGG 0.550483 7_1:+74889856 Msa1038080:CDS
AATTGTCTGTAAATAGGCTA+AGG 0.551876 7_1:-74893686 None:intergenic
TTTCCGAAGAGAAGGGTGTA+GGG 0.552195 7_1:-74889416 None:intergenic
TCTCAAAATTGTGTCAGTGC+TGG 0.552524 7_1:+74891378 Msa1038080:CDS
TGCATCCTATCTGAATGATA+CGG 0.553061 7_1:+74899858 Msa1038080:CDS
AAGAATACCTTTGTGAACAA+TGG 0.554034 7_1:-74900191 None:intergenic
ATCATTGGAACATTCGCCAA+TGG 0.555479 7_1:-74891213 None:intergenic
CAGATCCTATAACAGAGAAT+GGG 0.557862 7_1:-74894732 None:intergenic
AATGCCTCCACTCTTCCTCA+TGG 0.559030 7_1:-74897883 None:intergenic
GTTTCCGAAGAGAAGGGTGT+AGG 0.559472 7_1:-74889417 None:intergenic
CAAAATGACGCCGAAGATGT+TGG 0.560588 7_1:-74893716 None:intergenic
GCTTGTCATGGTGCAGAGAG+AGG 0.561389 7_1:-74893191 None:intergenic
AATAGCCATGAAAATTTCAT+CGG 0.561616 7_1:-74893070 None:intergenic
TGTCATCTTGGGAGCTCAAG+AGG 0.562299 7_1:+74901099 Msa1038080:three_prime_UTR
GACAATGTCACCATAGAAGA+TGG 0.562927 7_1:+74894853 Msa1038080:CDS
TTACATTGACATCTGCTCGC+CGG 0.564196 7_1:+74893659 Msa1038080:CDS
ACTGCTTCTGAATTATTGGA+TGG 0.564790 7_1:+74896886 Msa1038080:CDS
ACAAGGAATATACCGTGGCT+CGG 0.564823 7_1:+74894362 Msa1038080:CDS
GAACTGGAGTTAATTCATGA+TGG 0.565184 7_1:+74897962 Msa1038080:CDS
GAGAGCGCCAGAGTTTGGCT+AGG 0.571520 7_1:-74889357 None:intergenic
GATCACTCTTTCCCTCTCTA+CGG 0.573681 7_1:+74889446 Msa1038080:five_prime_UTR
GGAGACTTTGTCCTTATCAG+TGG 0.573784 7_1:+74892907 Msa1038080:CDS
GGGGCTCAACCTGCTTGTCA+TGG 0.573811 7_1:-74893203 None:intergenic
TGAATCAGCTGGTGTAGAAG+AGG 0.574781 7_1:+74891257 Msa1038080:CDS
TTCATAACATCTGGTACCAG+TGG 0.577449 7_1:-74894309 None:intergenic
AAGAGTGATAGGTCTAAACT+TGG 0.579985 7_1:-74889948 None:intergenic
TGCTGACAGTGTCATAACTT+CGG 0.582802 7_1:-74894260 None:intergenic
AAGTATTCTTCCACCTTCTG+GGG 0.583960 7_1:+74897985 Msa1038080:CDS
AGTATCTCTACTACAGCAGC+CGG 0.584040 7_1:+74895432 Msa1038080:CDS
GTCATCTTGGGAGCTCAAGA+GGG 0.584236 7_1:+74901100 Msa1038080:three_prime_UTR
TGGTGCCTAACACCTCAAAA+CGG 0.584333 7_1:+74889305 Msa1038080:five_prime_UTR
TCATAGATGGACATATCCAC+TGG 0.588064 7_1:+74894293 Msa1038080:CDS
CTTGTCATGGTGCAGAGAGA+GGG 0.589004 7_1:-74893190 None:intergenic
GCTATCCATCAGTCTCGACT+TGG 0.593196 7_1:+74893045 Msa1038080:CDS
CGGGTCAAATGTACACATAG+AGG 0.593427 7_1:+74894816 Msa1038080:CDS
GCCAACAGAATCGCCTGTAA+CGG 0.595148 7_1:-74889911 None:intergenic
TTGTCTGTAGTGGCTAAAAG+AGG 0.596027 7_1:+74901002 Msa1038080:intron
CTCGTCCGTATCATTCAGAT+AGG 0.596542 7_1:-74899863 None:intergenic
AGCACAGTGGATAAGTCAGA+TGG 0.596852 7_1:+74896859 Msa1038080:CDS
AAGCAACATGTCGCTTACTC+AGG 0.597045 7_1:+74892939 Msa1038080:CDS
TTCATGTTGTACTTACCAAG+TGG 0.599094 7_1:+74899824 Msa1038080:CDS
CGGAACAAACCTCTGAAGCA+GGG 0.599221 7_1:-74896918 None:intergenic
GAAGAAAGGCGCGGATGAGG+CGG 0.603471 7_1:+74900828 Msa1038080:CDS
GGTAACAGCTCCCCAGAAGG+TGG 0.603673 7_1:-74897995 None:intergenic
AAGCGCTGCTAGGGTTTCAG+AGG 0.606605 7_1:+74889865 Msa1038080:CDS
TTGACATGGCTTGAATCAGC+TGG 0.610800 7_1:+74891246 Msa1038080:CDS
GTTTGCTCCATTGTTCACAA+AGG 0.615724 7_1:+74900184 Msa1038080:CDS
GGATTGGATTATCAAAGATG+TGG 0.616116 7_1:-74901337 None:intergenic
TGATAAATTACACATTGACA+TGG 0.618999 7_1:+74891232 Msa1038080:CDS
AAGTTATGACACTGTCAGCA+AGG 0.620949 7_1:+74894263 Msa1038080:CDS
AATGTGTTTGGAATCTGCGA+AGG 0.621847 7_1:+74900160 Msa1038080:CDS
GTTTGGCCAAAATGTGAAGG+AGG 0.624679 7_1:+74897860 Msa1038080:CDS
GGGTCAAATGTACACATAGA+GGG 0.626953 7_1:+74894817 Msa1038080:CDS
AAAATAAGAGACAAGAAAAG+GGG 0.634135 7_1:-74889254 None:intergenic
GATCGCGTTTCCGAAGAGAA+GGG 0.634496 7_1:-74889423 None:intergenic
TTAGGTAACAGCTCCCCAGA+AGG 0.638298 7_1:-74897998 None:intergenic
TCCGCGCAGATTATGCTGCA+AGG 0.638328 7_1:+74894226 Msa1038080:CDS
TATCACTCTTGAACGCCCCA+AGG 0.638983 7_1:+74889961 Msa1038080:CDS
TCATGGTGCAGAGAGAGGGA+AGG 0.640432 7_1:-74893186 None:intergenic
GAATATGCTGATAGTACTAG+TGG 0.642214 7_1:+74895481 Msa1038080:CDS
TTTCATCCATACCCGAGCCA+CGG 0.644715 7_1:-74894374 None:intergenic
GAGGCCATGAGGAAGAGTGG+AGG 0.645571 7_1:+74897879 Msa1038080:CDS
GCTACTAAGCTTGAAAGACA+AGG 0.649677 7_1:+74894345 Msa1038080:CDS
TAGTAATGCTGTAATGACCA+TGG 0.655646 7_1:+74892996 Msa1038080:CDS
GGACATCTATATATTTGTCG+AGG 0.660131 7_1:+74901073 Msa1038080:three_prime_UTR
GGAAGAGTGGAGGCATTCAG+TGG 0.663488 7_1:+74897889 Msa1038080:CDS
AGCTCACCAGCTGAACTATG+GGG 0.666465 7_1:-74899062 None:intergenic
TATGTTTGGCCAAAATGTGA+AGG 0.666968 7_1:+74897857 Msa1038080:CDS
AGAGATACTTGTGAATAAGG+AGG 0.676241 7_1:-74895418 None:intergenic
GGAAGATGAGAAGAAAGGCG+CGG 0.690784 7_1:+74900819 Msa1038080:CDS
AATCCTAACTGAAAAGAACA+CGG 0.696865 7_1:-74901181 None:intergenic
TGCAGCCATCACCAGCACAG+TGG 0.703317 7_1:+74896846 Msa1038080:intron
TATTATATACGAGCGCAACG+TGG 0.703453 7_1:+74891413 Msa1038080:CDS
AAAATGTGAAGGAGGCCATG+AGG 0.717990 7_1:+74897868 Msa1038080:CDS
ACTATTTGGAGAAATCTGAG+TGG 0.722937 7_1:+74891319 Msa1038080:CDS
TCCTTGCAGCATAATCTGCG+CGG 0.727596 7_1:-74894227 None:intergenic
GAAAGACAAGGAATATACCG+TGG 0.737588 7_1:+74894357 Msa1038080:CDS
GAACACGAACAAGCTCATCG+TGG 0.778351 7_1:-74889889 None:intergenic
ATTGCACTACATGTATAACG+AGG 0.789338 7_1:+74900765 Msa1038080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+CGG + chr7_1:74890136-74890155 Msa1038080:intron 0.0%
!! TTCATAGATATATAAAAAAA+GGG - chr7_1:74890230-74890249 None:intergenic 10.0%
!!! TTTTCTTTTCAAATTATTAT+CGG - chr7_1:74890297-74890316 None:intergenic 10.0%
!!! ATTATGTATTTGTTAATTTA+AGG + chr7_1:74890385-74890404 Msa1038080:intron 10.0%
!! TTAGTAAGAATAAAAAAATT+TGG + chr7_1:74892331-74892350 Msa1038080:intron 10.0%
!!! AGTAATTTGTTTTTATAATT+TGG + chr7_1:74892728-74892747 Msa1038080:intron 10.0%
!! AAAAAAAAAAATGATTCAAA+AGG - chr7_1:74893868-74893887 None:intergenic 10.0%
!! AATGTAATTCAATAATAATA+GGG - chr7_1:74895540-74895559 None:intergenic 10.0%
!! TAATGTAATTCAATAATAAT+AGG - chr7_1:74895541-74895560 None:intergenic 10.0%
!!! TGAATCTTTTATAAATATTT+TGG + chr7_1:74895770-74895789 Msa1038080:intron 10.0%
!! TTTATCATTTAAAAAAAGAA+TGG + chr7_1:74896555-74896574 Msa1038080:intron 10.0%
!! TTATCATTTAAAAAAAGAAT+GGG + chr7_1:74896556-74896575 Msa1038080:intron 10.0%
!!! TTTTAAATTTAATAAAGTTG+AGG + chr7_1:74896680-74896699 Msa1038080:intron 10.0%
!! TAAAGAAAATAAATTTACTT+AGG - chr7_1:74896743-74896762 None:intergenic 10.0%
!!! ATTTAATTTACATTTAACAT+TGG + chr7_1:74897082-74897101 Msa1038080:intron 10.0%
!! TTCTTTAATATATTTAGATA+GGG - chr7_1:74898769-74898788 None:intergenic 10.0%
!! ATAATATAAATTAATCTCAA+AGG - chr7_1:74899763-74899782 None:intergenic 10.0%
!!! TTTTTTTTTTTTCTCATTTA+AGG - chr7_1:74901256-74901275 None:intergenic 10.0%
!! TAAATGAGAAAAAAAAAAAA+AGG + chr7_1:74901256-74901275 Msa1038080:three_prime_UTR 10.0%
!! TACAAAAAGAAAAACAATAA+TGG - chr7_1:74889603-74889622 None:intergenic 15.0%
!!! CTTATCTTATTTTTTAGTTT+AGG + chr7_1:74889768-74889787 Msa1038080:intron 15.0%
!! TATATTTATTACCAAGAAAA+TGG + chr7_1:74889829-74889848 Msa1038080:intron 15.0%
!! ATATTTATTACCAAGAAAAT+GGG + chr7_1:74889830-74889849 Msa1038080:intron 15.0%
!! AAAAAAATAGAAATTACCTT+GGG - chr7_1:74889980-74889999 None:intergenic 15.0%
!!! ATTTATGAATTCATTGTTTT+TGG + chr7_1:74890094-74890113 Msa1038080:intron 15.0%
!! CTTCATAGATATATAAAAAA+AGG - chr7_1:74890231-74890250 None:intergenic 15.0%
!! AGATTTAGAAATTAATAAGT+TGG + chr7_1:74890653-74890672 Msa1038080:intron 15.0%
!!! TTTACTTTTGATATAGAAAT+AGG + chr7_1:74890980-74890999 Msa1038080:intron 15.0%
!! CTTAAATTAACAAACAAATA+CGG - chr7_1:74891077-74891096 None:intergenic 15.0%
!!! TTTATTTGTTTCTTGATTTA+AGG + chr7_1:74891182-74891201 Msa1038080:intron 15.0%
!!! TTTTTGTAATAAACAGATTT+TGG + chr7_1:74892557-74892576 Msa1038080:intron 15.0%
!! TTATATTTCTTTCAGATAAT+GGG + chr7_1:74894180-74894199 Msa1038080:intron 15.0%
!! TGTAACATTAAATGATAAAA+TGG + chr7_1:74894432-74894451 Msa1038080:intron 15.0%
!! AAATACTAAACACAAATTAA+AGG - chr7_1:74895123-74895142 None:intergenic 15.0%
!!! TTTTTTTTTTCTCATTAGAT+GGG + chr7_1:74895295-74895314 Msa1038080:intron 15.0%
!!! TTAAAAGCTTTATGAAAATT+CGG - chr7_1:74895512-74895531 None:intergenic 15.0%
!!! CTTTTATAAATATTTTGGAT+TGG + chr7_1:74895775-74895794 Msa1038080:intron 15.0%
!! GTTTATAATAACAAAATACA+TGG - chr7_1:74896600-74896619 None:intergenic 15.0%
!! GTAAATTAAATTCTACAATT+TGG - chr7_1:74897073-74897092 None:intergenic 15.0%
!!! GATTGAAGTTTTTTTTTATT+TGG + chr7_1:74897408-74897427 Msa1038080:intron 15.0%
!!! TGATAGAATTTTCATTTTAA+AGG + chr7_1:74897773-74897792 Msa1038080:intron 15.0%
!!! GATAGAATTTTCATTTTAAA+GGG + chr7_1:74897774-74897793 Msa1038080:intron 15.0%
!!! AAAATTTTATCTTCAGTAAT+AGG - chr7_1:74897917-74897936 None:intergenic 15.0%
!!! TATTACTGAAGATAAAATTT+TGG + chr7_1:74897916-74897935 Msa1038080:CDS 15.0%
!! TTATCATGTTATTATTAGTT+CGG - chr7_1:74898458-74898477 None:intergenic 15.0%
!! GTTCTTTAATATATTTAGAT+AGG - chr7_1:74898770-74898789 None:intergenic 15.0%
!! GTTTCTCTTTATATTTAATT+AGG - chr7_1:74899312-74899331 None:intergenic 15.0%
!! AAACTAAAAAATAATGCAAT+TGG - chr7_1:74899968-74899987 None:intergenic 15.0%
!!! CATTATTTTTTAGTTTAATC+TGG + chr7_1:74899972-74899991 Msa1038080:intron 15.0%
!! TAAAATAAGAGACAAGAAAA+GGG - chr7_1:74889258-74889277 None:intergenic 20.0%
!! AGAGACAAAAAAAAATGTAT+TGG - chr7_1:74889750-74889769 None:intergenic 20.0%
!!! CTTATTTTTTAGTTTAGGTT+TGG + chr7_1:74889773-74889792 Msa1038080:intron 20.0%
!! AAAAAATAGAAATTACCTTG+GGG - chr7_1:74889979-74889998 None:intergenic 20.0%
!! CAAAAAAATAGAAATTACCT+TGG - chr7_1:74889981-74890000 None:intergenic 20.0%
!!! ATGCGTTTATTCATTATTTT+TGG + chr7_1:74890067-74890086 Msa1038080:intron 20.0%
!! AAATTATAAGAGAACCTATT+AGG + chr7_1:74890628-74890647 Msa1038080:intron 20.0%
!! AACATTCATATATAAGAACA+TGG + chr7_1:74890787-74890806 Msa1038080:intron 20.0%
!!! CGTATTTGTTTGTTAATTTA+AGG + chr7_1:74891075-74891094 Msa1038080:intron 20.0%
!! ATAGTTGTTACAGTAAAATT+AGG - chr7_1:74891354-74891373 None:intergenic 20.0%
!!! AGAGAAAATTTTGAAAATCA+AGG + chr7_1:74891696-74891715 Msa1038080:intron 20.0%
!!! AAATTTTGAAAATCAAGGAA+TGG + chr7_1:74891701-74891720 Msa1038080:intron 20.0%
!! TAATAAAAACTGTATTCTGT+TGG - chr7_1:74891992-74892011 None:intergenic 20.0%
!! TTATGATCAATCAAAATGAA+TGG + chr7_1:74892009-74892028 Msa1038080:intron 20.0%
!! TATTAAAGATGTATCTTATC+TGG + chr7_1:74892239-74892258 Msa1038080:intron 20.0%
!! AAAAAAATTTGGATACTTTC+TGG + chr7_1:74892342-74892361 Msa1038080:intron 20.0%
!! AAAAAATTTGGATACTTTCT+GGG + chr7_1:74892343-74892362 Msa1038080:intron 20.0%
!!! TTTTCTATTTTGAAGATACA+AGG + chr7_1:74892886-74892905 Msa1038080:intron 20.0%
!!! AATAAATCATCGATTCATTT+GGG - chr7_1:74893497-74893516 None:intergenic 20.0%
!!! TAATAAATCATCGATTCATT+TGG - chr7_1:74893498-74893517 None:intergenic 20.0%
!!! ATTATTAATGCTACTTTGTT+TGG + chr7_1:74893563-74893582 Msa1038080:intron 20.0%
!! CATTATCTGAAAGAAATATA+AGG - chr7_1:74894181-74894200 None:intergenic 20.0%
!! CTTATATTTCTTTCAGATAA+TGG + chr7_1:74894179-74894198 Msa1038080:intron 20.0%
!! AACTTCATACATTCAATTAA+TGG - chr7_1:74894654-74894673 None:intergenic 20.0%
!! AATATATTAACCATTAGTAG+TGG + chr7_1:74895155-74895174 Msa1038080:intron 20.0%
!!! GTTTTTTTTTTCTCATTAGA+TGG + chr7_1:74895294-74895313 Msa1038080:intron 20.0%
!! TGAATTACATTATTAGCAAT+TGG + chr7_1:74895549-74895568 Msa1038080:intron 20.0%
!! CAAACAGTTAGAATAATTAT+TGG + chr7_1:74895920-74895939 Msa1038080:intron 20.0%
!! TAGAATAATTATTGGAATCA+AGG + chr7_1:74895928-74895947 Msa1038080:intron 20.0%
!! AGAATAATTATTGGAATCAA+GGG + chr7_1:74895929-74895948 Msa1038080:intron 20.0%
!! AATTTCAGTTATTAAACAGA+GGG + chr7_1:74895954-74895973 Msa1038080:intron 20.0%
!! TTTGCAAGAAAAAAATCTTT+AGG - chr7_1:74896192-74896211 None:intergenic 20.0%
!!! ATTTTTTTCTTGCAAAGAAT+TGG + chr7_1:74896196-74896215 Msa1038080:intron 20.0%
!! TTTAAAAAAAGAATGGGAAT+TGG + chr7_1:74896562-74896581 Msa1038080:intron 20.0%
!! TCAAACTTGATAAATGAAAA+TGG - chr7_1:74896622-74896641 None:intergenic 20.0%
!! CTGGTATTTGATAAAAATTT+AGG + chr7_1:74896716-74896735 Msa1038080:intron 20.0%
!!! TATTTTCTTTATACTATGTG+TGG + chr7_1:74896752-74896771 Msa1038080:intron 20.0%
!!! TATGTTTTTTGTATGTAGAT+AGG + chr7_1:74896782-74896801 Msa1038080:intron 20.0%
!!! ACATAAATTAAGAAGTTTTC+CGG - chr7_1:74896941-74896960 None:intergenic 20.0%
!!! TACATCTCTAAAATGTTATT+TGG - chr7_1:74897031-74897050 None:intergenic 20.0%
!!! TTTTTTGATTGAAATCGATT+TGG + chr7_1:74897137-74897156 Msa1038080:intron 20.0%
!!! TGAAGTTTTTTTTTATTTGG+TGG + chr7_1:74897411-74897430 Msa1038080:intron 20.0%
!! TAGTGTATAAACAATATATC+TGG + chr7_1:74897614-74897633 Msa1038080:intron 20.0%
!! TTTGACATATAAACTTACAT+CGG + chr7_1:74898087-74898106 Msa1038080:intron 20.0%
!!! TGAAAACAACTTACTTTTAA+AGG - chr7_1:74898372-74898391 None:intergenic 20.0%
!! TAATAATAACATGATAAAGC+TGG + chr7_1:74898461-74898480 Msa1038080:intron 20.0%
!! GAAAGTTAATATGTATCTAT+AGG - chr7_1:74898568-74898587 None:intergenic 20.0%
!!! GTTCATAACTATTATTTTTC+TGG + chr7_1:74898842-74898861 Msa1038080:intron 20.0%
!!! ACATTGTTTTTATTTGTGTT+AGG + chr7_1:74898964-74898983 Msa1038080:intron 20.0%
!! TATGCCTGATAAAAAATAAA+CGG - chr7_1:74899128-74899147 None:intergenic 20.0%
!! TGTTACTAAATATATCTGAT+AGG - chr7_1:74899186-74899205 None:intergenic 20.0%
!!! ATATGGTTTTACTGAAATTT+TGG + chr7_1:74899576-74899595 Msa1038080:intron 20.0%
!! TTAATTTATATTATTGCCTG+TGG + chr7_1:74899769-74899788 Msa1038080:intron 20.0%
!! TAATTTATATTATTGCCTGT+GGG + chr7_1:74899770-74899789 Msa1038080:intron 20.0%
!! AAAATTTGAAGAAATGTGTT+TGG + chr7_1:74900148-74900167 Msa1038080:CDS 20.0%
!! TACAATACTTGTAAAATGAT+TGG + chr7_1:74900665-74900684 Msa1038080:intron 20.0%
!!! ATAATAAAGCCTATTTCTAT+TGG - chr7_1:74901282-74901301 None:intergenic 20.0%
!! TAGAAGAAAAAGAAAGATTA+AGG + chr7_1:74901302-74901321 Msa1038080:three_prime_UTR 20.0%
! AAAATAAGAGACAAGAAAAG+GGG - chr7_1:74889257-74889276 None:intergenic 25.0%
! CTAAAATAAGAGACAAGAAA+AGG - chr7_1:74889259-74889278 None:intergenic 25.0%
!! GATAATATTTTGTCTTACTC+TGG + chr7_1:74889285-74889304 Msa1038080:five_prime_UTR 25.0%
! TTCATTGTAATCATACGTTT+CGG + chr7_1:74890325-74890344 Msa1038080:intron 25.0%
!! GGTTCTCTTATAATTTTTCT+CGG - chr7_1:74890624-74890643 None:intergenic 25.0%
! ATTTCTAAATCTCTCCTAAT+AGG - chr7_1:74890645-74890664 None:intergenic 25.0%
!! TAATAAGTTGGACTGAAATA+TGG + chr7_1:74890665-74890684 Msa1038080:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr7_1:74890685-74890704 Msa1038080:intron 25.0%
!! GTAATGACATAAATTTTGTG+AGG + chr7_1:74890830-74890849 Msa1038080:intron 25.0%
! AGAAATAGGTTATACATAAG+CGG + chr7_1:74890994-74891013 Msa1038080:intron 25.0%
! ATAAGCTGTTTATCTAAACT+AGG + chr7_1:74891051-74891070 Msa1038080:intron 25.0%
! GTCAATGTGTAATTTATCAT+TGG - chr7_1:74891231-74891250 None:intergenic 25.0%
! TGATAAATTACACATTGACA+TGG + chr7_1:74891232-74891251 Msa1038080:CDS 25.0%
!! TATTTCTACTATGAATGTGT+TGG + chr7_1:74891879-74891898 Msa1038080:intron 25.0%
!! AAAATTCTCTAGAAGGAATA+GGG - chr7_1:74892142-74892161 None:intergenic 25.0%
! TACATATTGTAGGTACATAT+CGG + chr7_1:74892366-74892385 Msa1038080:intron 25.0%
!! GGAAACAATACTTTCATTTT+TGG + chr7_1:74892416-74892435 Msa1038080:intron 25.0%
!!! ACTTTCATTTTTGGAGTATT+TGG + chr7_1:74892425-74892444 Msa1038080:intron 25.0%
!!! CTTTCATTTTTGGAGTATTT+GGG + chr7_1:74892426-74892445 Msa1038080:intron 25.0%
! AAATTACTATGACACATGTA+AGG - chr7_1:74892716-74892735 None:intergenic 25.0%
!!! CACTTTTAGAACATAAAGAA+AGG + chr7_1:74892962-74892981 Msa1038080:CDS 25.0%
! TAATGACCATGGTTATTAAA+CGG + chr7_1:74893007-74893026 Msa1038080:CDS 25.0%
! AATAGCCATGAAAATTTCAT+CGG - chr7_1:74893073-74893092 None:intergenic 25.0%
! ACTCGTAAACGAATTATTAT+CGG + chr7_1:74893296-74893315 Msa1038080:intron 25.0%
!! AAAAAAATGCAGTTTAGTTC+AGG + chr7_1:74893364-74893383 Msa1038080:intron 25.0%
! AGTCAAAATTGTCTGTAAAT+AGG - chr7_1:74893695-74893714 None:intergenic 25.0%
!! AGCTTATCCTTTTTAATAGA+TGG + chr7_1:74893831-74893850 Msa1038080:intron 25.0%
!!! GCTTTTTCCATCTATTAAAA+AGG - chr7_1:74893841-74893860 None:intergenic 25.0%
! TTAAATGTTCTCAACAAACA+GGG - chr7_1:74893952-74893971 None:intergenic 25.0%
! TTTAAATGTTCTCAACAAAC+AGG - chr7_1:74893953-74893972 None:intergenic 25.0%
! AAACATAAATGATGAGCTTT+AGG - chr7_1:74894093-74894112 None:intergenic 25.0%
!! GTTTCCAATATATTCTTTTG+TGG + chr7_1:74894109-74894128 Msa1038080:intron 25.0%
! AATATAAGGTAATGTTGATG+AGG - chr7_1:74894167-74894186 None:intergenic 25.0%
! ATAAAATGGCAAGCTTATAT+TGG + chr7_1:74894446-74894465 Msa1038080:intron 25.0%
! ATTAATGGAAACAACACAAT+AGG - chr7_1:74894639-74894658 None:intergenic 25.0%
! AAAATTATGACCACTACTAA+TGG - chr7_1:74895168-74895187 None:intergenic 25.0%
! TAATATAAAAAGAGATACCG+AGG + chr7_1:74895738-74895757 Msa1038080:intron 25.0%
! GAATTTCAGTTATTAAACAG+AGG + chr7_1:74895953-74895972 Msa1038080:intron 25.0%
! GTAACTCTGTATTATTTAAC+TGG - chr7_1:74896141-74896160 None:intergenic 25.0%
! AGAGTTACCTTCAAATTTAT+GGG + chr7_1:74896153-74896172 Msa1038080:intron 25.0%
!! ACAATTGCATTTAAGTGTTT+TGG + chr7_1:74896247-74896266 Msa1038080:intron 25.0%
! TGTAATTGTTTAGCTAATTC+TGG + chr7_1:74896291-74896310 Msa1038080:intron 25.0%
!! GAAACATTTTCTAACTTTGT+TGG + chr7_1:74896352-74896371 Msa1038080:intron 25.0%
! TTTCAAAATCCAATTTAGAG+AGG + chr7_1:74896408-74896427 Msa1038080:intron 25.0%
! TTTGTATGTAGATAGGTTAA+AGG + chr7_1:74896789-74896808 Msa1038080:intron 25.0%
!!! TTTTAGAGATGTAAGTTTTC+TGG + chr7_1:74897038-74897057 Msa1038080:intron 25.0%
! AAATTCTACAATTTGGTTGA+CGG - chr7_1:74897066-74897085 None:intergenic 25.0%
! TGTTAAAACTGTGTTCTATT+CGG + chr7_1:74897198-74897217 Msa1038080:intron 25.0%
!!! AGTTTTTTTTTATTTGGTGG+TGG + chr7_1:74897414-74897433 Msa1038080:intron 25.0%
! TATATTGCGAATAAGTTTGT+CGG - chr7_1:74897563-74897582 None:intergenic 25.0%
!!! CTTTCTTTTTTTAATCAGCT+AGG + chr7_1:74897818-74897837 Msa1038080:intron 25.0%
!!! TTTTTTAATCAGCTAGGTTT+TGG + chr7_1:74897824-74897843 Msa1038080:intron 25.0%
!! TACTGAAGATAAAATTTTGG+AGG + chr7_1:74897919-74897938 Msa1038080:CDS 25.0%
!! TTTAATATTCTGTCATTTGC+AGG + chr7_1:74898133-74898152 Msa1038080:intron 25.0%
!!! AATTGACTTCTAAAGTCAAA+TGG - chr7_1:74898205-74898224 None:intergenic 25.0%
! TTTAACATCCAAAATACAGA+GGG - chr7_1:74898328-74898347 None:intergenic 25.0%
!!! GTTCTGTTTCTTTTTTTGAA+GGG - chr7_1:74898647-74898666 None:intergenic 25.0%
!!! TGTTCTGTTTCTTTTTTTGA+AGG - chr7_1:74898648-74898667 None:intergenic 25.0%
! ATTAAAAAGACTCTAACAAC+AGG - chr7_1:74899100-74899119 None:intergenic 25.0%
!!! TTTCCCGTTTATTTTTTATC+AGG + chr7_1:74899121-74899140 Msa1038080:intron 25.0%
! ATGCCTGATAAAAAATAAAC+GGG - chr7_1:74899127-74899146 None:intergenic 25.0%
!! TTTTTATCAGGCATAGAATA+TGG + chr7_1:74899133-74899152 Msa1038080:intron 25.0%
! TAGAAGATACTGAAATTGAA+AGG + chr7_1:74899274-74899293 Msa1038080:intron 25.0%
! AGAAGATACTGAAATTGAAA+GGG + chr7_1:74899275-74899294 Msa1038080:intron 25.0%
! TTTCCAACATGTATATATGT+TGG + chr7_1:74899684-74899703 Msa1038080:intron 25.0%
!!! TAGTTATATTTTGAACTCTC+AGG + chr7_1:74899712-74899731 Msa1038080:intron 25.0%
!!! AGTTATATTTTGAACTCTCA+GGG + chr7_1:74899713-74899732 Msa1038080:intron 25.0%
! AAATCACAATAAAAGAAGAG+TGG - chr7_1:74900016-74900035 None:intergenic 25.0%
! ATCATCCAATGTTCATTATA+AGG + chr7_1:74900048-74900067 Msa1038080:intron 25.0%
!!! AAGGTATTCTTATCTTTTAC+TGG + chr7_1:74900203-74900222 Msa1038080:intron 25.0%
!!! ATTCTTATCTTTTACTGGTT+AGG + chr7_1:74900208-74900227 Msa1038080:intron 25.0%
!! TGTTATAGTTTTTCTTTCTG+AGG - chr7_1:74900375-74900394 None:intergenic 25.0%
! CAGAAAGAAAAACTATAACA+TGG + chr7_1:74900375-74900394 Msa1038080:intron 25.0%
! GAGTTAATAATGTTGTGAAA+TGG + chr7_1:74900492-74900511 Msa1038080:intron 25.0%
!!! ATGGATTTTAACACAATTGA+AGG + chr7_1:74900511-74900530 Msa1038080:intron 25.0%
! TATATAGACAGCATGAAAAT+GGG - chr7_1:74900647-74900666 None:intergenic 25.0%
! AAGATACTCACTTGAATTAA+TGG - chr7_1:74900880-74900899 None:intergenic 25.0%
! TTATTTATTCTTGTCTGTAG+TGG + chr7_1:74900992-74901011 Msa1038080:intron 25.0%
! AAAAAAAGGCCAATAGAAAT+AGG + chr7_1:74901270-74901289 Msa1038080:three_prime_UTR 25.0%
!! TTTAAAGTTGAATGGCAAAA+GGG - chr7_1:74901361-74901380 None:intergenic 25.0%
!! ATTTAAAGTTGAATGGCAAA+AGG - chr7_1:74901362-74901381 None:intergenic 25.0%
! TGAACACACAATATTTTACG+TGG - chr7_1:74889231-74889250 None:intergenic 30.0%
CATAGTTGAGAAATGAGATT+GGG - chr7_1:74889565-74889584 None:intergenic 30.0%
!! AATAATGGATTTGTTTGTGC+AGG - chr7_1:74889588-74889607 None:intergenic 30.0%
TGGTTGATTAATCTAAATCG+TGG - chr7_1:74889730-74889749 None:intergenic 30.0%
TATATAAAAAAAGGGCAACC+CGG - chr7_1:74890222-74890241 None:intergenic 30.0%
TGCGATGATAAATTTCACAT+TGG + chr7_1:74890430-74890449 Msa1038080:intron 30.0%
! GGTTAATTTGAACATTTGTG+TGG + chr7_1:74890451-74890470 Msa1038080:intron 30.0%
AGTACCAACTATAGTAGAAA+AGG + chr7_1:74890527-74890546 Msa1038080:intron 30.0%
TAGAAAAGGTGGTTGAAAAT+AGG + chr7_1:74890541-74890560 Msa1038080:intron 30.0%
ACTAACAACAACAACAAAGA+AGG - chr7_1:74890733-74890752 None:intergenic 30.0%
! ATAAATTTTGTGAGGCTGTA+TGG + chr7_1:74890838-74890857 Msa1038080:intron 30.0%
! ACTGTTTTCATAAGCTATCA+TGG - chr7_1:74890929-74890948 None:intergenic 30.0%
!! ATTTAAGGTGCTTTTACCAT+TGG + chr7_1:74891197-74891216 Msa1038080:intron 30.0%
CTATTGTAAATATGCTACAG+TGG + chr7_1:74891516-74891535 Msa1038080:intron 30.0%
TTGAAGTCTGTATTGAACAA+TGG + chr7_1:74891581-74891600 Msa1038080:intron 30.0%
CTGGATACATAGTATGATAT+GGG + chr7_1:74891645-74891664 Msa1038080:intron 30.0%
AGTATGATATGGGTACAATA+TGG + chr7_1:74891655-74891674 Msa1038080:intron 30.0%
!! TACAATATGGCACTGATTTA+AGG + chr7_1:74891668-74891687 Msa1038080:intron 30.0%
AATTGTGATCATCCAACAAT+AGG + chr7_1:74891816-74891835 Msa1038080:intron 30.0%
!!! AAATCTGATTTTTTACCCAG+CGG - chr7_1:74891907-74891926 None:intergenic 30.0%
AACTGTATTCTGTTGGAAAA+GGG - chr7_1:74891985-74892004 None:intergenic 30.0%
AAACTGTATTCTGTTGGAAA+AGG - chr7_1:74891986-74892005 None:intergenic 30.0%
! CAAAATTCTCTAGAAGGAAT+AGG - chr7_1:74892143-74892162 None:intergenic 30.0%
!! CTATTCCTTCTAGAGAATTT+TGG + chr7_1:74892141-74892160 Msa1038080:intron 30.0%
AGATTCCAAAATTCTCTAGA+AGG - chr7_1:74892149-74892168 None:intergenic 30.0%
!!! TAGAGAATTTTGGAATCTCT+TGG + chr7_1:74892151-74892170 Msa1038080:intron 30.0%
! TTTTTGTGACACATTCTGTT+AGG - chr7_1:74892179-74892198 None:intergenic 30.0%
AAAGATGTATCTTATCTGGA+TGG + chr7_1:74892243-74892262 Msa1038080:intron 30.0%
CATGCATTTAATACCGATAT+GGG - chr7_1:74892393-74892412 None:intergenic 30.0%
ACATGCATTTAATACCGATA+TGG - chr7_1:74892394-74892413 None:intergenic 30.0%
ATCGGTATTAAATGCATGTT+AGG + chr7_1:74892395-74892414 Msa1038080:intron 30.0%
CTAATGAAACAAACAACAAG+AGG - chr7_1:74892611-74892630 None:intergenic 30.0%
TTATGTATGCTCTGTTCTAT+TGG + chr7_1:74892660-74892679 Msa1038080:intron 30.0%
!! CTGTTCTATTGGTTCTTTAA+AGG + chr7_1:74892671-74892690 Msa1038080:intron 30.0%
! ATTGGTTCTTTAAAGGAACA+AGG + chr7_1:74892678-74892697 Msa1038080:intron 30.0%
! GTTTTGTGTAGTAACACTAT+TGG + chr7_1:74892859-74892878 Msa1038080:intron 30.0%
! TTTTGACCGTTTAATAACCA+TGG - chr7_1:74893016-74893035 None:intergenic 30.0%
TACAAAAGTTGCTTGGTATT+AGG - chr7_1:74893099-74893118 None:intergenic 30.0%
AGCAGAAAGATAGGAAAAAA+GGG - chr7_1:74893226-74893245 None:intergenic 30.0%
AAGCAGAAAGATAGGAAAAA+AGG - chr7_1:74893227-74893246 None:intergenic 30.0%
!!! CTAAACTGCATTTTTTTTCG+TGG - chr7_1:74893361-74893380 None:intergenic 30.0%
!! TTTTTAGGAGAAAACATCAC+AGG - chr7_1:74893404-74893423 None:intergenic 30.0%
!!! CGTCACAGGTATTTTTTTTT+AGG - chr7_1:74893419-74893438 None:intergenic 30.0%
AATTGTCTGTAAATAGGCTA+AGG - chr7_1:74893689-74893708 None:intergenic 30.0%
!!! ATTTTGACTACCAACATCTT+CGG + chr7_1:74893706-74893725 Msa1038080:CDS 30.0%
! AAAGGATAAGCTGATTCAAA+AGG - chr7_1:74893823-74893842 None:intergenic 30.0%
TCTACTTGTTTATCTCTTAC+AGG + chr7_1:74893902-74893921 Msa1038080:intron 30.0%
TGAAACACTTCAACAGTTTA+TGG + chr7_1:74894015-74894034 Msa1038080:intron 30.0%
ACTGCCACAAAAGAATATAT+TGG - chr7_1:74894116-74894135 None:intergenic 30.0%
GCAAGGATATAATTCATAGA+TGG + chr7_1:74894280-74894299 Msa1038080:CDS 30.0%
! GTACCAGATGTTATGAATTT+TGG + chr7_1:74894315-74894334 Msa1038080:CDS 30.0%
TTGCCAAAATTCATAACATC+TGG - chr7_1:74894321-74894340 None:intergenic 30.0%
!!! ATGAAAGTTTTGGTGTTGAT+TGG + chr7_1:74894391-74894410 Msa1038080:intron 30.0%
!!! TGAAAGTTTTGGTGTTGATT+GGG + chr7_1:74894392-74894411 Msa1038080:intron 30.0%
! AAGATTTTAAATTCCGTCGT+CGG + chr7_1:74894778-74894797 Msa1038080:CDS 30.0%
CAAACATATGAGAAACATGA+AGG - chr7_1:74894998-74895017 None:intergenic 30.0%
CTTCATGTTTCTCATATGTT+TGG + chr7_1:74894996-74895015 Msa1038080:intron 30.0%
! ATTTCATGTTTGATGATCCT+AGG + chr7_1:74895227-74895246 Msa1038080:intron 30.0%
TCTTCGTAAGATGGAAATAT+AGG + chr7_1:74895343-74895362 Msa1038080:intron 30.0%
CTTCGTAAGATGGAAATATA+GGG + chr7_1:74895344-74895363 Msa1038080:intron 30.0%
AGTAGAGATACTTGTGAATA+AGG - chr7_1:74895424-74895443 None:intergenic 30.0%
TTCCTTAGAACTGAATGAAT+TGG + chr7_1:74895633-74895652 Msa1038080:intron 30.0%
! TTGAGCTTGATTAGATGTTT+TGG + chr7_1:74895683-74895702 Msa1038080:intron 30.0%
CAGAGTTACCTTCAAATTTA+TGG + chr7_1:74896152-74896171 Msa1038080:intron 30.0%
GATAGAACCCATAAATTTGA+AGG - chr7_1:74896163-74896182 None:intergenic 30.0%
!! TTTTGAAAACCATACAAGAG+AGG - chr7_1:74896396-74896415 None:intergenic 30.0%
CACAAAAAAACTAGAGAAAG+AGG - chr7_1:74896488-74896507 None:intergenic 30.0%
!!! CTCTTTCTCTAGTTTTTTTG+TGG + chr7_1:74896486-74896505 Msa1038080:intron 30.0%
AAATGTTTATGCACTTATCG+AGG - chr7_1:74896527-74896546 None:intergenic 30.0%
AAAAAAAGAATGGGAATTGG+AGG + chr7_1:74896565-74896584 Msa1038080:intron 30.0%
TCAAATACCAGTTACAGTTA+AGG - chr7_1:74896707-74896726 None:intergenic 30.0%
AGAAACTGCTTCTGAATTAT+TGG + chr7_1:74896882-74896901 Msa1038080:CDS 30.0%
AACAGTTACTTAGTATCTTC+AGG - chr7_1:74897176-74897195 None:intergenic 30.0%
! TTTTCTTCATTGATGTGAGA+GGG + chr7_1:74897227-74897246 Msa1038080:intron 30.0%
TTAAACTAACAGATCTACAC+AGG + chr7_1:74897277-74897296 Msa1038080:intron 30.0%
GACAATGCATAATATATGCA+AGG - chr7_1:74897459-74897478 None:intergenic 30.0%
!!! TCTGATTTTTCAAGTATCGT+TGG + chr7_1:74897591-74897610 Msa1038080:intron 30.0%
! CAAAGTATCAGCAAATTACT+AGG - chr7_1:74897657-74897676 None:intergenic 30.0%
TTCTTAGTGAACAATTCATC+CGG + chr7_1:74897680-74897699 Msa1038080:intron 30.0%
TCATCTGAATCATTAGGATT+AGG - chr7_1:74898019-74898038 None:intergenic 30.0%
ATGTGTGTTCGATATATATC+TGG + chr7_1:74898299-74898318 Msa1038080:intron 30.0%
GTTTAACATCCAAAATACAG+AGG - chr7_1:74898329-74898348 None:intergenic 30.0%
AGATACAAACAACAGAACTA+TGG + chr7_1:74898600-74898619 Msa1038080:intron 30.0%
TTCTAGACAAAATTGAACAC+TGG - chr7_1:74898792-74898811 None:intergenic 30.0%
TAGAATATGGTTGGAAAACT+TGG + chr7_1:74899146-74899165 Msa1038080:intron 30.0%
GAAGATACTGAAATTGAAAG+GGG + chr7_1:74899276-74899295 Msa1038080:intron 30.0%
ATCACTTACAGAATGCAAAA+AGG + chr7_1:74899433-74899452 Msa1038080:intron 30.0%
TTGGTTTATGACAAGTACAT+TGG + chr7_1:74899595-74899614 Msa1038080:intron 30.0%
ACATGTTGGAAAGTAAGATT+GGG - chr7_1:74899676-74899695 None:intergenic 30.0%
TACATGTTGGAAAGTAAGAT+TGG - chr7_1:74899677-74899696 None:intergenic 30.0%
TGACCAACATATATACATGT+TGG - chr7_1:74899690-74899709 None:intergenic 30.0%
!! GTTATATTTTGAACTCTCAG+GGG + chr7_1:74899714-74899733 Msa1038080:intron 30.0%
ATCTGAAAAATTAATCCCAC+AGG - chr7_1:74899788-74899807 None:intergenic 30.0%
!! TGTGGGATTAATTTTTCAGA+TGG + chr7_1:74899787-74899806 Msa1038080:intron 30.0%
!! GATTAATTTTTCAGATGGCT+TGG + chr7_1:74899792-74899811 Msa1038080:intron 30.0%
! ACAAGCCTTATAATGAACAT+TGG - chr7_1:74900056-74900075 None:intergenic 30.0%
!!! ATTTTAGAATCACTTCGATC+TGG - chr7_1:74900133-74900152 None:intergenic 30.0%
AAGAATACCTTTGTGAACAA+TGG - chr7_1:74900194-74900213 None:intergenic 30.0%
TCACAACATTATTAACTCAC+TGG - chr7_1:74900490-74900509 None:intergenic 30.0%
GTATATAGACAGCATGAAAA+TGG - chr7_1:74900648-74900667 None:intergenic 30.0%
TTCATATTCTCACACTACAT+TGG + chr7_1:74900698-74900717 Msa1038080:intron 30.0%
!!! AAGAAGATGCTATTTTGAGT+TGG + chr7_1:74900797-74900816 Msa1038080:CDS 30.0%
!!! AGAAGATGCTATTTTGAGTT+GGG + chr7_1:74900798-74900817 Msa1038080:CDS 30.0%
AAGAAAGTAATGCATCTCAT+GGG - chr7_1:74900961-74900980 None:intergenic 30.0%
TAAGAAAGTAATGCATCTCA+TGG - chr7_1:74900962-74900981 None:intergenic 30.0%
!!! CGAAGAGTAGAAATTTTTTG+AGG + chr7_1:74901047-74901066 Msa1038080:exon 30.0%
!!! AGTAGAAATTTTTTGAGGCT+AGG + chr7_1:74901052-74901071 Msa1038080:exon 30.0%
AGAATCACACTTGAATTCAA+AGG - chr7_1:74901146-74901165 None:intergenic 30.0%
AATCCTAACTGAAAAGAACA+CGG - chr7_1:74901184-74901203 None:intergenic 30.0%
! ATTTAGAGAAACACCAGTTT+TGG + chr7_1:74901206-74901225 Msa1038080:three_prime_UTR 30.0%
! TTTAGAGAAACACCAGTTTT+GGG + chr7_1:74901207-74901226 Msa1038080:three_prime_UTR 30.0%
TAAAATACATGACCCAAAAC+TGG - chr7_1:74901222-74901241 None:intergenic 30.0%
! ATGGCTCATTTAAAGTTGAA+TGG - chr7_1:74901369-74901388 None:intergenic 30.0%
CGTAGAGAAGAGTAAAATGA+AGG - chr7_1:74889489-74889508 None:intergenic 35.0%
GCATAGTTGAGAAATGAGAT+TGG - chr7_1:74889566-74889585 None:intergenic 35.0%
! ATGCTTTCTTTTCCCTGTTT+TGG + chr7_1:74889696-74889715 Msa1038080:intron 35.0%
GTGGTAAGAAAACCAAAACA+GGG - chr7_1:74889711-74889730 None:intergenic 35.0%
AAGAGTGATAGGTCTAAACT+TGG - chr7_1:74889951-74889970 None:intergenic 35.0%
CATTGACATTGATATGACAC+TGG + chr7_1:74890264-74890283 Msa1038080:intron 35.0%
!! ATTTAAGGTGCTATTGCCAT+TGG + chr7_1:74890400-74890419 Msa1038080:intron 35.0%
ATTTGTGTGGTAAGACTAGA+TGG + chr7_1:74890464-74890483 Msa1038080:intron 35.0%
TTTGTGTGGTAAGACTAGAT+GGG + chr7_1:74890465-74890484 Msa1038080:intron 35.0%
CAATATTAGAGAGAGAGAGT+TGG + chr7_1:74890504-74890523 Msa1038080:intron 35.0%
ACCAACTATAGTAGAAAAGG+TGG + chr7_1:74890530-74890549 Msa1038080:intron 35.0%
! ACCACCTTTTCTACTATAGT+TGG - chr7_1:74890534-74890553 None:intergenic 35.0%
AAAATAGGCATAGGTGGTTT+GGG + chr7_1:74890556-74890575 Msa1038080:intron 35.0%
!! ATTTAAGGTGCTTTTGCCAT+TGG + chr7_1:74891090-74891109 Msa1038080:intron 35.0%
GAAGCAGGTGATTAACTATT+TGG + chr7_1:74891305-74891324 Msa1038080:CDS 35.0%
ACTATTTGGAGAAATCTGAG+TGG + chr7_1:74891319-74891338 Msa1038080:CDS 35.0%
AACAATGGTTGTTGTGTTCT+TGG + chr7_1:74891596-74891615 Msa1038080:intron 35.0%
GTTGTGTTCTTGGTTAGAAT+TGG + chr7_1:74891606-74891625 Msa1038080:intron 35.0%
! TGGTTTTCAGTTAAGAAACC+TGG + chr7_1:74891626-74891645 Msa1038080:intron 35.0%
CCATATCATACTATGTATCC+AGG - chr7_1:74891647-74891666 None:intergenic 35.0%
CCTGGATACATAGTATGATA+TGG + chr7_1:74891644-74891663 Msa1038080:intron 35.0%
TATGTCACTAAGCCTATTGT+TGG - chr7_1:74891831-74891850 None:intergenic 35.0%
AGAATCAAAGAAACACATGC+AGG + chr7_1:74891936-74891955 Msa1038080:intron 35.0%
GAATCAAAGAAACACATGCA+GGG + chr7_1:74891937-74891956 Msa1038080:intron 35.0%
AAATGAATGGATCCCAAACA+TGG + chr7_1:74892022-74892041 Msa1038080:intron 35.0%
AATGAATGGATCCCAAACAT+GGG + chr7_1:74892023-74892042 Msa1038080:intron 35.0%
TTAGTAGTTAGTAGCAGCAA+GGG - chr7_1:74892069-74892088 None:intergenic 35.0%
ATTAGTAGTTAGTAGCAGCA+AGG - chr7_1:74892070-74892089 None:intergenic 35.0%
TAACTGCTGCATAAACTTAG+TGG + chr7_1:74892115-74892134 Msa1038080:intron 35.0%
ACTTTCTGGGTACATATTGT+AGG + chr7_1:74892356-74892375 Msa1038080:intron 35.0%
!!! CTTCCAAGCTTTTTAAGATG+AGG + chr7_1:74892449-74892468 Msa1038080:intron 35.0%
ACACCTCATCTTAAAAAGCT+TGG - chr7_1:74892455-74892474 None:intergenic 35.0%
ATAACCTTATCTAGACTAGG+AGG - chr7_1:74892505-74892524 None:intergenic 35.0%
TCCTAGTCTAGATAAGGTTA+TGG + chr7_1:74892504-74892523 Msa1038080:intron 35.0%
TTACAGTATCTCCACTGATA+AGG - chr7_1:74892921-74892940 None:intergenic 35.0%
TAGTAATGCTGTAATGACCA+TGG + chr7_1:74892996-74893015 Msa1038080:CDS 35.0%
!!! TGGTACCGATGAAATTTTCA+TGG + chr7_1:74893065-74893084 Msa1038080:CDS 35.0%
CTCGTAATACAAAAGTTGCT+TGG - chr7_1:74893106-74893125 None:intergenic 35.0%
! CAAGCAACTTTTGTATTACG+AGG + chr7_1:74893104-74893123 Msa1038080:CDS 35.0%
GATAAAGCAGACTTCTCAAA+AGG + chr7_1:74893126-74893145 Msa1038080:CDS 35.0%
GCAGAAAGATAGGAAAAAAG+GGG - chr7_1:74893225-74893244 None:intergenic 35.0%
TGAAAGCAAAGCAGAAAGAT+AGG - chr7_1:74893235-74893254 None:intergenic 35.0%
TATCTTTCTGCTTTGCTTTC+AGG + chr7_1:74893234-74893253 Msa1038080:intron 35.0%
ACTTCACGCTAAAGAGTAAT+TGG + chr7_1:74893260-74893279 Msa1038080:intron 35.0%
!! GCTAAAGAGTAATTGGTTTG+CGG + chr7_1:74893267-74893286 Msa1038080:intron 35.0%
GAAATGACAATAAACGTCAC+AGG - chr7_1:74893433-74893452 None:intergenic 35.0%
! TGTCATTTCAACCTCATGAT+TGG + chr7_1:74893444-74893463 Msa1038080:intron 35.0%
GTCATTTCAACCTCATGATT+GGG + chr7_1:74893445-74893464 Msa1038080:intron 35.0%
AGAAAGTTTCATAGCTTCTC+AGG - chr7_1:74893601-74893620 None:intergenic 35.0%
AGAAGCTATGAAACTTTCTG+AGG + chr7_1:74893602-74893621 Msa1038080:intron 35.0%
! GTGAATGATTTCTTTTCTGC+AGG + chr7_1:74893632-74893651 Msa1038080:intron 35.0%
ATTCATGACAGTTCAACATG+TGG - chr7_1:74893777-74893796 None:intergenic 35.0%
AACAGTTTATGGACTTGCAT+TGG + chr7_1:74894026-74894045 Msa1038080:intron 35.0%
CAAACAGGCAAACATATAAC+TGG - chr7_1:74894481-74894500 None:intergenic 35.0%
ACAGCATGAATTAAGCAAAC+AGG - chr7_1:74894496-74894515 None:intergenic 35.0%
TGCTTGCGAAATATCTGATA+GGG - chr7_1:74894695-74894714 None:intergenic 35.0%
CAGATCCTATAACAGAGAAT+GGG - chr7_1:74894735-74894754 None:intergenic 35.0%
ACATAGAGGGATGCTATATA+TGG + chr7_1:74894830-74894849 Msa1038080:CDS 35.0%
CATAGAGGGATGCTATATAT+GGG + chr7_1:74894831-74894850 Msa1038080:CDS 35.0%
! AACATGAAGGATGGAAGTAT+GGG - chr7_1:74894985-74895004 None:intergenic 35.0%
AAACATGAAGGATGGAAGTA+TGG - chr7_1:74894986-74895005 None:intergenic 35.0%
CATATGAGAAACATGAAGGA+TGG - chr7_1:74894994-74895013 None:intergenic 35.0%
CAAACATCTTACATACACCT+AGG - chr7_1:74895247-74895266 None:intergenic 35.0%
TCCAGTTATTCTTCGTAAGA+TGG + chr7_1:74895334-74895353 Msa1038080:intron 35.0%
TCCATCTTACGAAGAATAAC+TGG - chr7_1:74895338-74895357 None:intergenic 35.0%
TTGTTGTCTTTCATGTTTCC+AGG + chr7_1:74895369-74895388 Msa1038080:intron 35.0%
AGAGATACTTGTGAATAAGG+AGG - chr7_1:74895421-74895440 None:intergenic 35.0%
GAATATGCTGATAGTACTAG+TGG + chr7_1:74895481-74895500 Msa1038080:CDS 35.0%
CTAGCATATGAAATATTGCC+TGG + chr7_1:74895588-74895607 Msa1038080:intron 35.0%
CACCAATTCATTCAGTTCTA+AGG - chr7_1:74895638-74895657 None:intergenic 35.0%
CTTAGAACTGAATGAATTGG+TGG + chr7_1:74895636-74895655 Msa1038080:intron 35.0%
!! AAGTTTGCTGAGAGTTGTTT+AGG + chr7_1:74896002-74896021 Msa1038080:intron 35.0%
GATGAAAACAGAAAACTGAG+AGG - chr7_1:74896090-74896109 None:intergenic 35.0%
TCTATACAGCCTCTCTAAAT+TGG - chr7_1:74896420-74896439 None:intergenic 35.0%
TGTGAGACTGTTCATTCAAA+AGG - chr7_1:74896450-74896469 None:intergenic 35.0%
CTTTATACTATGTGTGGATG+TGG + chr7_1:74896758-74896777 Msa1038080:intron 35.0%
GATGGCTGCATAAATGAAAA+TGG - chr7_1:74896836-74896855 None:intergenic 35.0%
ACTGCTTCTGAATTATTGGA+TGG + chr7_1:74896886-74896905 Msa1038080:CDS 35.0%
ACAGCAGTAAAGCTAAACAA+TGG - chr7_1:74896970-74896989 None:intergenic 35.0%
! GTTTTCTTCATTGATGTGAG+AGG + chr7_1:74897226-74897245 Msa1038080:intron 35.0%
GTTGAATTACAACAAGCACA+GGG - chr7_1:74897330-74897349 None:intergenic 35.0%
AGTTGAATTACAACAAGCAC+AGG - chr7_1:74897331-74897350 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG - chr7_1:74897454-74897473 None:intergenic 35.0%
GTATCAGCAAATTACTAGGT+TGG - chr7_1:74897653-74897672 None:intergenic 35.0%
ATCCACTACAATCATTTGCA+TGG - chr7_1:74897707-74897726 None:intergenic 35.0%
!! TTTAATCAGCTAGGTTTTGG+TGG + chr7_1:74897827-74897846 Msa1038080:intron 35.0%
!! TTAATCAGCTAGGTTTTGGT+GGG + chr7_1:74897828-74897847 Msa1038080:intron 35.0%
TATGTTTGGCCAAAATGTGA+AGG + chr7_1:74897857-74897876 Msa1038080:CDS 35.0%
GAACTGGAGTTAATTCATGA+TGG + chr7_1:74897962-74897981 Msa1038080:CDS 35.0%
TCATCGTCATCTGAATCATT+AGG - chr7_1:74898025-74898044 None:intergenic 35.0%
AAGAGATGACTTTGACAAAG+AGG + chr7_1:74898057-74898076 Msa1038080:CDS 35.0%
TCATGCATGCATCATATACT+TGG + chr7_1:74898398-74898417 Msa1038080:intron 35.0%
! TATTCTACTAACCGACTCAA+CGG + chr7_1:74898531-74898550 Msa1038080:intron 35.0%
!!! CTGTTTCTTTTTTTGAAGGG+AGG - chr7_1:74898644-74898663 None:intergenic 35.0%
TGTTACAGTTATTGTGCACT+AGG - chr7_1:74898675-74898694 None:intergenic 35.0%
TATTTAGATAGGGTCAGTTG+AGG - chr7_1:74898759-74898778 None:intergenic 35.0%
ACTTTGAATCTGCATTCACT+AGG + chr7_1:74898926-74898945 Msa1038080:intron 35.0%
AGACTCTAACAACAGGAATA+TGG - chr7_1:74899093-74899112 None:intergenic 35.0%
TATCAGGCATAGAATATGGT+TGG + chr7_1:74899137-74899156 Msa1038080:intron 35.0%
GTGAAGTTATACTCTCATAG+TGG - chr7_1:74899334-74899353 None:intergenic 35.0%
TAGCTAAAAACTTATGCCAG+TGG - chr7_1:74899412-74899431 None:intergenic 35.0%
CGAATGAATATGATACAGGT+AGG - chr7_1:74899468-74899487 None:intergenic 35.0%
ACCTGTATCATATTCATTCG+AGG + chr7_1:74899468-74899487 Msa1038080:intron 35.0%
TCCTCGAATGAATATGATAC+AGG - chr7_1:74899472-74899491 None:intergenic 35.0%
!! TACATTGGTGTTAGTATCCA+TGG + chr7_1:74899610-74899629 Msa1038080:intron 35.0%
TTCATGTTGTACTTACCAAG+TGG + chr7_1:74899824-74899843 Msa1038080:CDS 35.0%
TGTACTTACCAAGTGGAAAA+AGG + chr7_1:74899831-74899850 Msa1038080:CDS 35.0%
TGCATCCTATCTGAATGATA+CGG + chr7_1:74899858-74899877 Msa1038080:CDS 35.0%
GAACATGAGTAACTTCAACA+AGG - chr7_1:74899913-74899932 None:intergenic 35.0%
! TCGATCTGGAGCAAAAAAAT+TGG - chr7_1:74900119-74900138 None:intergenic 35.0%
! TTGAGTTGTCCTTATTCAGT+TGG + chr7_1:74900234-74900253 Msa1038080:intron 35.0%
TTAGACAGTGTTATATCCTC+TGG + chr7_1:74900406-74900425 Msa1038080:intron 35.0%
TAGACAGTGTTATATCCTCT+GGG + chr7_1:74900407-74900426 Msa1038080:intron 35.0%
GTTGGAACTTCAATTGTGTT+AGG - chr7_1:74900558-74900577 None:intergenic 35.0%
GTTAAGGAGTCAAAACACAA+AGG - chr7_1:74900734-74900753 None:intergenic 35.0%
GCAATATCTGAAAGCAGTTA+AGG - chr7_1:74900750-74900769 None:intergenic 35.0%
ATTGCACTACATGTATAACG+AGG + chr7_1:74900765-74900784 Msa1038080:CDS 35.0%
CTTGAATTAATGGTTGAGCT+TGG - chr7_1:74900870-74900889 None:intergenic 35.0%
GGACATCTATATATTTGTCG+AGG + chr7_1:74901073-74901092 Msa1038080:three_prime_UTR 35.0%
! AGTGTGATTCTCTTTTCACA+CGG + chr7_1:74901155-74901174 Msa1038080:three_prime_UTR 35.0%
! TATCCGTGTTCTTTTCAGTT+AGG + chr7_1:74901178-74901197 Msa1038080:three_prime_UTR 35.0%
GGATTGGATTATCAAAGATG+TGG - chr7_1:74901340-74901359 None:intergenic 35.0%
CTCAAAACGGTATCGTTTGA+GGG + chr7_1:74889318-74889337 Msa1038080:five_prime_UTR 40.0%
! GCATGCGGATTTGAGTTATT+CGG - chr7_1:74889680-74889699 None:intergenic 40.0%
! AACAGGGAAAAGAAAGCATG+CGG - chr7_1:74889695-74889714 None:intergenic 40.0%
CGTGGTAAGAAAACCAAAAC+AGG - chr7_1:74889712-74889731 None:intergenic 40.0%
! GTTTCGGTGATCAAAAGTGT+AGG + chr7_1:74890341-74890360 Msa1038080:intron 40.0%
ATCATCGCAACAATCACCAA+TGG - chr7_1:74890419-74890438 None:intergenic 40.0%
AGGTGGTTGAAAATAGGCAT+AGG + chr7_1:74890547-74890566 Msa1038080:intron 40.0%
TGGTTGAAAATAGGCATAGG+TGG + chr7_1:74890550-74890569 Msa1038080:intron 40.0%
GAAAATAGGCATAGGTGGTT+TGG + chr7_1:74890555-74890574 Msa1038080:intron 40.0%
AGGCTGTATGGAAGAACTTA+TGG + chr7_1:74890850-74890869 Msa1038080:intron 40.0%
! TCGAAGCATTCATTCACCAA+TGG - chr7_1:74891109-74891128 None:intergenic 40.0%
ATCATTGGAACATTCGCCAA+TGG - chr7_1:74891216-74891235 None:intergenic 40.0%
TCTCAAAATTGTGTCAGTGC+TGG + chr7_1:74891378-74891397 Msa1038080:CDS 40.0%
TATTATATACGAGCGCAACG+TGG + chr7_1:74891413-74891432 Msa1038080:CDS 40.0%
! ATGCAGGGATTTTTCTGCAA+GGG + chr7_1:74891952-74891971 Msa1038080:intron 40.0%
ATGAATGGATCCCAAACATG+GGG + chr7_1:74892024-74892043 Msa1038080:intron 40.0%
ATACTGTTACCCCCATGTTT+GGG - chr7_1:74892037-74892056 None:intergenic 40.0%
AATACTGTTACCCCCATGTT+TGG - chr7_1:74892038-74892057 None:intergenic 40.0%
GTTAGTAGTTAGAGAGGGAA+AGG - chr7_1:74892099-74892118 None:intergenic 40.0%
CAGCAGTTAGTAGTTAGAGA+GGG - chr7_1:74892104-74892123 None:intergenic 40.0%
ATGTTTCGAAGATGTACCTG+AGG + chr7_1:74892289-74892308 Msa1038080:intron 40.0%
!! ATGTACCTGAGGAGTATTGA+GGG + chr7_1:74892300-74892319 Msa1038080:intron 40.0%
GCCATAACCTTATCTAGACT+AGG - chr7_1:74892508-74892527 None:intergenic 40.0%
GTAAATAGGCTAAGGACTTC+CGG - chr7_1:74893681-74893700 None:intergenic 40.0%
TGCTGACAGTGTCATAACTT+CGG - chr7_1:74894263-74894282 None:intergenic 40.0%
AAGTTATGACACTGTCAGCA+AGG + chr7_1:74894263-74894282 Msa1038080:CDS 40.0%
TCATAGATGGACATATCCAC+TGG + chr7_1:74894293-74894312 Msa1038080:CDS 40.0%
TTCATAACATCTGGTACCAG+TGG - chr7_1:74894312-74894331 None:intergenic 40.0%
GCTACTAAGCTTGAAAGACA+AGG + chr7_1:74894345-74894364 Msa1038080:CDS 40.0%
GAAAGACAAGGAATATACCG+TGG + chr7_1:74894357-74894376 Msa1038080:CDS 40.0%
! TCGGGTATGGATGAAAGTTT+TGG + chr7_1:74894381-74894400 Msa1038080:intron 40.0%
TATCACCCTTGTAGATTGCT+GGG + chr7_1:74894598-74894617 Msa1038080:intron 40.0%
TTTGACCCAGCAATCTACAA+GGG - chr7_1:74894606-74894625 None:intergenic 40.0%
! TTTTGACCCAGCAATCTACA+AGG - chr7_1:74894607-74894626 None:intergenic 40.0%
GCTTGCGAAATATCTGATAG+GGG - chr7_1:74894694-74894713 None:intergenic 40.0%
GTGCTTGCGAAATATCTGAT+AGG - chr7_1:74894696-74894715 None:intergenic 40.0%
CCAGATCCTATAACAGAGAA+TGG - chr7_1:74894736-74894755 None:intergenic 40.0%
CCATTCTCTGTTATAGGATC+TGG + chr7_1:74894733-74894752 Msa1038080:CDS 40.0%
ATAGGATCTGGCACCAAAAT+TGG + chr7_1:74894745-74894764 Msa1038080:CDS 40.0%
! CTTCGTGTTCTTGCCAATTT+TGG - chr7_1:74894761-74894780 None:intergenic 40.0%
GGGTCAAATGTACACATAGA+GGG + chr7_1:74894817-74894836 Msa1038080:CDS 40.0%
GACAATGTCACCATAGAAGA+TGG + chr7_1:74894853-74894872 Msa1038080:CDS 40.0%
AAGTTCACAGCCATCTTCTA+TGG - chr7_1:74894866-74894885 None:intergenic 40.0%
TAGAAGATGGCTGTGAACTT+AGG + chr7_1:74894866-74894885 Msa1038080:CDS 40.0%
TAATCACCCCTCACATACAA+TGG - chr7_1:74894896-74894915 None:intergenic 40.0%
TGAGGGGTGATTATGAAATC+AGG + chr7_1:74894903-74894922 Msa1038080:intron 40.0%
TATGAAATCAGGATCTGCTC+TGG + chr7_1:74894914-74894933 Msa1038080:intron 40.0%
TTAAAAGACAGCACAACACC+AGG - chr7_1:74894942-74894961 None:intergenic 40.0%
!!! TGGTGTTGTGCTGTCTTTTA+AGG + chr7_1:74894941-74894960 Msa1038080:intron 40.0%
CACACTTCACCACAATATTC+AGG + chr7_1:74895036-74895055 Msa1038080:intron 40.0%
ACTTCACCACAATATTCAGG+TGG + chr7_1:74895039-74895058 Msa1038080:intron 40.0%
TAGTGACCACCTGAATATTG+TGG - chr7_1:74895048-74895067 None:intergenic 40.0%
TCATGTTTCCAGGTTGTAGT+TGG + chr7_1:74895379-74895398 Msa1038080:intron 40.0%
CATGTTTCCAGGTTGTAGTT+GGG + chr7_1:74895380-74895399 Msa1038080:intron 40.0%
! AATTTTCCTCACTATCAGCC+AGG - chr7_1:74895609-74895628 None:intergenic 40.0%
AAGATTCAGTGTATGCACCT+CGG - chr7_1:74895758-74895777 None:intergenic 40.0%
AACACATGTACAGGAACTCA+GGG - chr7_1:74895830-74895849 None:intergenic 40.0%
AAGCTGTACTTGTGTGGTTT+GGG - chr7_1:74895868-74895887 None:intergenic 40.0%
! TTCTAGAAGCTGTACTTGTG+TGG - chr7_1:74895874-74895893 None:intergenic 40.0%
TAAACAGAGGGAATCCTAGA+CGG + chr7_1:74895966-74895985 Msa1038080:intron 40.0%
AGAGAAGTTCTCTCTGATCT+AGG + chr7_1:74896025-74896044 Msa1038080:intron 40.0%
!! ACTTTGTTGGCTTGAGTACA+TGG + chr7_1:74896365-74896384 Msa1038080:intron 40.0%
!! CTTTGTTGGCTTGAGTACAT+GGG + chr7_1:74896366-74896385 Msa1038080:intron 40.0%
TTGAGGTCCTTAACTGTAAC+TGG + chr7_1:74896697-74896716 Msa1038080:intron 40.0%
!! ACATTTTAACCCTGCTTCAG+AGG + chr7_1:74896909-74896928 Msa1038080:CDS 40.0%
GTTACTTAGTATCTTCAGGC+TGG - chr7_1:74897172-74897191 None:intergenic 40.0%
CTAACAGATCTACACAGGAT+AGG + chr7_1:74897282-74897301 Msa1038080:intron 40.0%
CAGGGTGAAATTAAAGCTAG+AGG - chr7_1:74897312-74897331 None:intergenic 40.0%
CATAATATATGCAAGGTCCG+GGG - chr7_1:74897452-74897471 None:intergenic 40.0%
GCATAATATATGCAAGGTCC+GGG - chr7_1:74897453-74897472 None:intergenic 40.0%
CTACAATCATTTGCATGGTC+CGG - chr7_1:74897702-74897721 None:intergenic 40.0%
GACCATGCAAATGATTGTAG+TGG + chr7_1:74897702-74897721 Msa1038080:intron 40.0%
!! TAATCAGCTAGGTTTTGGTG+GGG + chr7_1:74897829-74897848 Msa1038080:intron 40.0%
TTTGGAGGCAATGAAAGCTA+TGG + chr7_1:74897934-74897953 Msa1038080:CDS 40.0%
GAAAGCTATGGAAGATGAAC+TGG + chr7_1:74897946-74897965 Msa1038080:CDS 40.0%
! GAAGTATTCTTCCACCTTCT+GGG + chr7_1:74897984-74898003 Msa1038080:CDS 40.0%
AAGTATTCTTCCACCTTCTG+GGG + chr7_1:74897985-74898004 Msa1038080:CDS 40.0%
!! CTTACATCGGTTGCATTTTG+TGG + chr7_1:74898100-74898119 Msa1038080:intron 40.0%
! AGGTTGAAGCAACTTTTCTG+AGG + chr7_1:74898153-74898172 Msa1038080:intron 40.0%
! GGTTGAAGCAACTTTTCTGA+GGG + chr7_1:74898154-74898173 Msa1038080:intron 40.0%
AGTTCGGACATGAAAACTGA+AGG - chr7_1:74898442-74898461 None:intergenic 40.0%
ATATCCTAACTCCGTTGAGT+CGG - chr7_1:74898545-74898564 None:intergenic 40.0%
GTGCACAATAACTGTAACAC+AGG + chr7_1:74898676-74898695 Msa1038080:intron 40.0%
TAGAAGCTATGCCATCTTCA+TGG + chr7_1:74898807-74898826 Msa1038080:intron 40.0%
TATGCCATCTTCATGGATGA+TGG + chr7_1:74898814-74898833 Msa1038080:intron 40.0%
GAACTGCAATTCTTTGACTC+CGG + chr7_1:74898864-74898883 Msa1038080:intron 40.0%
AACACATATGACGAGAACAC+CGG - chr7_1:74898886-74898905 None:intergenic 40.0%
GTTGGAAAACTTGGCATCTT+GGG + chr7_1:74899155-74899174 Msa1038080:intron 40.0%
ACTGAAATTGAAAGGGGTAG+AGG + chr7_1:74899282-74899301 Msa1038080:intron 40.0%
CTGAAATTGAAAGGGGTAGA+GGG + chr7_1:74899283-74899302 Msa1038080:intron 40.0%
GTAATAGCGCTTGCTCTATA+TGG + chr7_1:74899559-74899578 Msa1038080:intron 40.0%
! TGCAAGAACCTTTTTCCACT+TGG - chr7_1:74899842-74899861 None:intergenic 40.0%
! AATGTGTTTGGAATCTGCGA+AGG + chr7_1:74900160-74900179 Msa1038080:CDS 40.0%
GTTTGCTCCATTGTTCACAA+AGG + chr7_1:74900184-74900203 Msa1038080:CDS 40.0%
GACATGCTACCAACTGAATA+AGG - chr7_1:74900246-74900265 None:intergenic 40.0%
! AAGTATTTTCCTATGCCCAG+AGG - chr7_1:74900425-74900444 None:intergenic 40.0%
TTTCAGTCAGCAAAGCAAGT+AGG - chr7_1:74900596-74900615 None:intergenic 40.0%
AGTTGGGAAGATGAGAAGAA+AGG + chr7_1:74900814-74900833 Msa1038080:CDS 40.0%
TTGTCTGTAGTGGCTAAAAG+AGG + chr7_1:74901002-74901021 Msa1038080:intron 40.0%
TTCGTCTTCATCGTCTTCTT+CGG - chr7_1:74901031-74901050 None:intergenic 40.0%
AGTTGAATGGCAAAAGGGAT+TGG - chr7_1:74901356-74901375 None:intergenic 40.0%
TGGTGCCTAACACCTCAAAA+CGG + chr7_1:74889305-74889324 Msa1038080:five_prime_UTR 45.0%
!!! CGATACCGTTTTGAGGTGTT+AGG - chr7_1:74889313-74889332 None:intergenic 45.0%
! CCTCAAACGATACCGTTTTG+AGG - chr7_1:74889320-74889339 None:intergenic 45.0%
CCTCAAAACGGTATCGTTTG+AGG + chr7_1:74889317-74889336 Msa1038080:five_prime_UTR 45.0%
TTCTCAACCTAGCCAAACTC+TGG + chr7_1:74889350-74889369 Msa1038080:five_prime_UTR 45.0%
AAACCCTACACCCTTCTCTT+CGG + chr7_1:74889413-74889432 Msa1038080:five_prime_UTR 45.0%
! TTTCCGAAGAGAAGGGTGTA+GGG - chr7_1:74889419-74889438 None:intergenic 45.0%
GATCACTCTTTCCCTCTCTA+CGG + chr7_1:74889446-74889465 Msa1038080:five_prime_UTR 45.0%
! TATTCGGTGGCGTTAGAGTT+TGG - chr7_1:74889644-74889663 None:intergenic 45.0%
! TGCGGATTTGAGTTATTCGG+TGG - chr7_1:74889657-74889676 None:intergenic 45.0%
! CGGTGCGGATTTGAGTTATT+CGG - chr7_1:74889660-74889679 None:intergenic 45.0%
! CGGATTTGAGTTATTCGGTG+CGG - chr7_1:74889655-74889674 None:intergenic 45.0%
TATATCGGACCCTGCATATG+CGG + chr7_1:74890183-74890202 Msa1038080:intron 45.0%
GTGGTAAGACTAGATGGGAT+AGG + chr7_1:74890470-74890489 Msa1038080:intron 45.0%
AGCTAGGAGAGTAGATCAGA+TGG + chr7_1:74890592-74890611 Msa1038080:intron 45.0%
TAGGAGAGTAGATCAGATGG+AGG + chr7_1:74890595-74890614 Msa1038080:intron 45.0%
! AGAAGGCTTTTCCGACTAAG+CGG - chr7_1:74890716-74890735 None:intergenic 45.0%
TTGACATGGCTTGAATCAGC+TGG + chr7_1:74891246-74891265 Msa1038080:CDS 45.0%
TGAATCAGCTGGTGTAGAAG+AGG + chr7_1:74891257-74891276 Msa1038080:CDS 45.0%
! CATGCAGGGATTTTTCTGCA+AGG + chr7_1:74891951-74891970 Msa1038080:intron 45.0%
TGAATGGATCCCAAACATGG+GGG + chr7_1:74892025-74892044 Msa1038080:intron 45.0%
GCAGCAGTTAGTAGTTAGAG+AGG - chr7_1:74892105-74892124 None:intergenic 45.0%
!! GATGTACCTGAGGAGTATTG+AGG + chr7_1:74892299-74892318 Msa1038080:intron 45.0%
!! TGTACCTGAGGAGTATTGAG+GGG + chr7_1:74892301-74892320 Msa1038080:intron 45.0%
TATTCCCCTCAATACTCCTC+AGG - chr7_1:74892308-74892327 None:intergenic 45.0%
GGTACATATCGGACCCATAT+CGG + chr7_1:74892377-74892396 Msa1038080:intron 45.0%
TCTAGACTAGGAGGTAGCTA+GGG - chr7_1:74892496-74892515 None:intergenic 45.0%
ATCTAGACTAGGAGGTAGCT+AGG - chr7_1:74892497-74892516 None:intergenic 45.0%
GCTACCTCCTAGTCTAGATA+AGG + chr7_1:74892498-74892517 Msa1038080:intron 45.0%
GGAGACTTTGTCCTTATCAG+TGG + chr7_1:74892907-74892926 Msa1038080:CDS 45.0%
! AAGCAACATGTCGCTTACTC+AGG + chr7_1:74892939-74892958 Msa1038080:CDS 45.0%
TTACATTGACATCTGCTCGC+CGG + chr7_1:74893659-74893678 Msa1038080:CDS 45.0%
CAAAATGACGCCGAAGATGT+TGG - chr7_1:74893719-74893738 None:intergenic 45.0%
!! TCTTCGGCGTCATTTTGTCA+AGG + chr7_1:74893722-74893741 Msa1038080:CDS 45.0%
!! CTTCGGCGTCATTTTGTCAA+GGG + chr7_1:74893723-74893742 Msa1038080:CDS 45.0%
ACAAGGAATATACCGTGGCT+CGG + chr7_1:74894362-74894381 Msa1038080:CDS 45.0%
!! TTGGTGTTGATTGGGTGTGT+TGG + chr7_1:74894400-74894419 Msa1038080:intron 45.0%
GTATCACCCTTGTAGATTGC+TGG + chr7_1:74894597-74894616 Msa1038080:intron 45.0%
CAAGCACAATCAGCTGTTGT+TGG + chr7_1:74894709-74894728 Msa1038080:CDS 45.0%
GTTGGCCCATTCTCTGTTAT+AGG + chr7_1:74894727-74894746 Msa1038080:CDS 45.0%
TTAAATTCCGTCGTCGGAGT+AGG + chr7_1:74894784-74894803 Msa1038080:CDS 45.0%
GTCGGAGTAGGATGCAAAAT+CGG + chr7_1:74894796-74894815 Msa1038080:CDS 45.0%
TCGGAGTAGGATGCAAAATC+GGG + chr7_1:74894797-74894816 Msa1038080:CDS 45.0%
CGGGTCAAATGTACACATAG+AGG + chr7_1:74894816-74894835 Msa1038080:CDS 45.0%
TAGGCATGCCATTGTATGTG+AGG + chr7_1:74894885-74894904 Msa1038080:intron 45.0%
AGGCATGCCATTGTATGTGA+GGG + chr7_1:74894886-74894905 Msa1038080:intron 45.0%
AGTATCTCTACTACAGCAGC+CGG + chr7_1:74895432-74895451 Msa1038080:CDS 45.0%
! ATATTGCCTGGCTGATAGTG+AGG + chr7_1:74895600-74895619 Msa1038080:intron 45.0%
CAACACATGTACAGGAACTC+AGG - chr7_1:74895831-74895850 None:intergenic 45.0%
CTGAGTTCCTGTACATGTGT+TGG + chr7_1:74895829-74895848 Msa1038080:intron 45.0%
AATTGGGCCAACACATGTAC+AGG - chr7_1:74895839-74895858 None:intergenic 45.0%
! ACATGTGTTGGCCCAATTAC+TGG + chr7_1:74895841-74895860 Msa1038080:intron 45.0%
! CATGTGTTGGCCCAATTACT+GGG + chr7_1:74895842-74895861 Msa1038080:intron 45.0%
GAAGCTGTACTTGTGTGGTT+TGG - chr7_1:74895869-74895888 None:intergenic 45.0%
TAGAAGCCTGTAGAAGCTGT+GGG + chr7_1:74895889-74895908 Msa1038080:intron 45.0%
CTGATCTAGGAGCTTAACTC+TGG + chr7_1:74896038-74896057 Msa1038080:intron 45.0%
TCTAGGAGCTTAACTCTGGT+AGG + chr7_1:74896042-74896061 Msa1038080:intron 45.0%
ATGGGTCAACCTCTCTTGTA+TGG + chr7_1:74896384-74896403 Msa1038080:intron 45.0%
ATCTGACTTATCCACTGTGC+TGG - chr7_1:74896860-74896879 None:intergenic 45.0%
AGCACAGTGGATAAGTCAGA+TGG + chr7_1:74896859-74896878 Msa1038080:CDS 45.0%
TCATTGATGTGAGAGGGAGA+TGG + chr7_1:74897233-74897252 Msa1038080:intron 45.0%
CATTGATGTGAGAGGGAGAT+GGG + chr7_1:74897234-74897253 Msa1038080:intron 45.0%
!!! TTTTTATTTGGTGGTGGCCG+TGG + chr7_1:74897420-74897439 Msa1038080:intron 45.0%
ATGTCCTTGTGAGCTTAGCT+CGG - chr7_1:74897490-74897509 None:intergenic 45.0%
GTTTGGCCAAAATGTGAAGG+AGG + chr7_1:74897860-74897879 Msa1038080:CDS 45.0%
! TCATGGCCTCCTTCACATTT+TGG - chr7_1:74897869-74897888 None:intergenic 45.0%
AAAATGTGAAGGAGGCCATG+AGG + chr7_1:74897868-74897887 Msa1038080:CDS 45.0%
!! GGAAGTATTCTTCCACCTTC+TGG + chr7_1:74897983-74898002 Msa1038080:CDS 45.0%
! TCTGGCATCCCTCTGTATTT+TGG + chr7_1:74898317-74898336 Msa1038080:intron 45.0%
TAGATAGGGTCAGTTGAGGT+TGG - chr7_1:74898755-74898774 None:intergenic 45.0%
CACTCCATCATCCATGAAGA+TGG - chr7_1:74898821-74898840 None:intergenic 45.0%
! AAGATAGCTGCTGATTGTGC+TGG + chr7_1:74898999-74899018 Msa1038080:CDS 45.0%
AAGCTCACCAGCTGAACTAT+GGG - chr7_1:74899066-74899085 None:intergenic 45.0%
AAAGCTCACCAGCTGAACTA+TGG - chr7_1:74899067-74899086 None:intergenic 45.0%
GGTTGGAAAACTTGGCATCT+TGG + chr7_1:74899154-74899173 Msa1038080:intron 45.0%
TTAACTGGGAGTCTCTAGTG+AGG + chr7_1:74899235-74899254 Msa1038080:intron 45.0%
TAGAGCAAGCGCTATTACAG+TGG - chr7_1:74899557-74899576 None:intergenic 45.0%
CTCGTCCGTATCATTCAGAT+AGG - chr7_1:74899866-74899885 None:intergenic 45.0%
!! CAGTTGGTAGCATGTCAGAA+AGG + chr7_1:74900250-74900269 Msa1038080:intron 45.0%
GTGTTATATCCTCTGGGCAT+AGG + chr7_1:74900413-74900432 Msa1038080:intron 45.0%
AGGCGAGCGTGAAAATTTGT+TGG - chr7_1:74900538-74900557 None:intergenic 45.0%
AGGCGAGCGTGAAAATTTGT+TGG - chr7_1:74900538-74900557 None:intergenic 45.0%
TCGTCTTCATCGTCTTCTTC+GGG - chr7_1:74901030-74901049 None:intergenic 45.0%
!!! TAACTTTTAAAATTTTTAAT+TGG + chr7_1:74889800-74889819 Msa1038080:intron 5.0%
!!! AACTTTTAAAATTTTTAATT+GGG + chr7_1:74889801-74889820 Msa1038080:intron 5.0%
! GTTTCCGAAGAGAAGGGTGT+AGG - chr7_1:74889420-74889439 None:intergenic 50.0%
GATCGCGTTTCCGAAGAGAA+GGG - chr7_1:74889426-74889445 None:intergenic 50.0%
CAAAAGACGCACCGTAGAGA+GGG - chr7_1:74889460-74889479 None:intergenic 50.0%
ACAAAAGACGCACCGTAGAG+AGG - chr7_1:74889461-74889480 None:intergenic 50.0%
!!! CTTCGGTGCTCCCATTTTCT+TGG - chr7_1:74889843-74889862 None:intergenic 50.0%
!! ACCGAAGAAAAGCGCTGCTA+GGG + chr7_1:74889856-74889875 Msa1038080:CDS 50.0%
! ACCCTAGCAGCGCTTTTCTT+CGG - chr7_1:74889860-74889879 None:intergenic 50.0%
GAACACGAACAAGCTCATCG+TGG - chr7_1:74889892-74889911 None:intergenic 50.0%
GCTTGTTCGTGTTCCGTTAC+AGG + chr7_1:74889898-74889917 Msa1038080:CDS 50.0%
TCCGTTACAGGCGATTCTGT+TGG + chr7_1:74889910-74889929 Msa1038080:CDS 50.0%
GCCAACAGAATCGCCTGTAA+CGG - chr7_1:74889914-74889933 None:intergenic 50.0%
! TTGGGGCGTTCAAGAGTGAT+AGG - chr7_1:74889962-74889981 None:intergenic 50.0%
TATCACTCTTGAACGCCCCA+AGG + chr7_1:74889961-74889980 Msa1038080:CDS 50.0%
ATATCGGACCCTGCATATGC+GGG + chr7_1:74890184-74890203 Msa1038080:intron 50.0%
GGGCATGTAGAGATGTAGCT+AGG + chr7_1:74890576-74890595 Msa1038080:intron 50.0%
TTATGGCGATCCCGCTTAGT+CGG + chr7_1:74890702-74890721 Msa1038080:intron 50.0%
! GAAGGCTTTTCCGACTAAGC+GGG - chr7_1:74890715-74890734 None:intergenic 50.0%
!! TATGAATGTGTTGGCTCCGC+TGG + chr7_1:74891888-74891907 Msa1038080:intron 50.0%
!! ATGAATGTGTTGGCTCCGCT+GGG + chr7_1:74891889-74891908 Msa1038080:intron 50.0%
GTAGTTAGAGAGGGAAAGGC+TGG - chr7_1:74892095-74892114 None:intergenic 50.0%
! AGTCGAGACTGATGGATAGC+TGG - chr7_1:74893045-74893064 None:intergenic 50.0%
GCTATCCATCAGTCTCGACT+TGG + chr7_1:74893045-74893064 Msa1038080:CDS 50.0%
CTTGTCATGGTGCAGAGAGA+GGG - chr7_1:74893193-74893212 None:intergenic 50.0%
CCTAGCATAGCCCAATCATG+AGG - chr7_1:74893458-74893477 None:intergenic 50.0%
CCTCATGATTGGGCTATGCT+AGG + chr7_1:74893455-74893474 Msa1038080:intron 50.0%
GCAGACCTACATTTCGTCTG+AGG + chr7_1:74893924-74893943 Msa1038080:intron 50.0%
TCCTTGCAGCATAATCTGCG+CGG - chr7_1:74894230-74894249 None:intergenic 50.0%
CAAGGAATATACCGTGGCTC+GGG + chr7_1:74894363-74894382 Msa1038080:CDS 50.0%
! AATATACCGTGGCTCGGGTA+TGG + chr7_1:74894368-74894387 Msa1038080:intron 50.0%
TTTCATCCATACCCGAGCCA+CGG - chr7_1:74894377-74894396 None:intergenic 50.0%
TTTGCATCCTACTCCGACGA+CGG - chr7_1:74894794-74894813 None:intergenic 50.0%
GGCATGCCATTGTATGTGAG+GGG + chr7_1:74894887-74894906 Msa1038080:intron 50.0%
TTTCCAGGTTGTAGTTGGGC+AGG + chr7_1:74895384-74895403 Msa1038080:intron 50.0%
TCGTCGCTATCTTCCTCAAC+CGG - chr7_1:74895454-74895473 None:intergenic 50.0%
! GTGGTTTGGGCCCAGTAATT+GGG - chr7_1:74895855-74895874 None:intergenic 50.0%
! TGTGGTTTGGGCCCAGTAAT+TGG - chr7_1:74895856-74895875 None:intergenic 50.0%
CTAGAAGCCTGTAGAAGCTG+TGG + chr7_1:74895888-74895907 Msa1038080:intron 50.0%
TTCTGACTGCTTCACCGTCT+AGG - chr7_1:74895983-74896002 None:intergenic 50.0%
GGTAGGAGTTCTCTGAACTC+TGG + chr7_1:74896059-74896078 Msa1038080:intron 50.0%
! CTTATCCACTGTGCTGGTGA+TGG - chr7_1:74896854-74896873 None:intergenic 50.0%
!! CGGAACAAACCTCTGAAGCA+GGG - chr7_1:74896921-74896940 None:intergenic 50.0%
! CCTGCTTCAGAGGTTTGTTC+CGG + chr7_1:74896919-74896938 Msa1038080:intron 50.0%
! TGAGCTTAGCTCGGTTGGTA+GGG - chr7_1:74897481-74897500 None:intergenic 50.0%
!! TTGGTGGGGCTGGTTATGTT+TGG + chr7_1:74897843-74897862 Msa1038080:CDS 50.0%
AATGCCTCCACTCTTCCTCA+TGG - chr7_1:74897886-74897905 None:intergenic 50.0%
TTAGGTAACAGCTCCCCAGA+AGG - chr7_1:74898001-74898020 None:intergenic 50.0%
! CTAACCGACTCAACGGAGTT+AGG + chr7_1:74898538-74898557 Msa1038080:intron 50.0%
TAGGGTCAGTTGAGGTTGGA+TGG - chr7_1:74898751-74898770 None:intergenic 50.0%
AGCTCACCAGCTGAACTATG+GGG - chr7_1:74899065-74899084 None:intergenic 50.0%
CTTAGCATTACCCCACTAGG+AGG - chr7_1:74899644-74899663 None:intergenic 50.0%
CCACTTAGCATTACCCCACT+AGG - chr7_1:74899647-74899666 None:intergenic 50.0%
CCTAGTGGGGTAATGCTAAG+TGG + chr7_1:74899644-74899663 Msa1038080:intron 50.0%
TCTGAATGATACGGACGAGC+AGG + chr7_1:74899867-74899886 Msa1038080:CDS 50.0%
GGAAGATGAGAAGAAAGGCG+CGG + chr7_1:74900819-74900838 Msa1038080:CDS 50.0%
!! TTGTCGAGGTGCTGTCATCT+TGG + chr7_1:74901087-74901106 Msa1038080:three_prime_UTR 50.0%
!! TGTCGAGGTGCTGTCATCTT+GGG + chr7_1:74901088-74901107 Msa1038080:three_prime_UTR 50.0%
TGTCATCTTGGGAGCTCAAG+AGG + chr7_1:74901099-74901118 Msa1038080:three_prime_UTR 50.0%
GTCATCTTGGGAGCTCAAGA+GGG + chr7_1:74901100-74901119 Msa1038080:three_prime_UTR 50.0%
!! CACTAGAGAGCGCCAGAGTT+TGG - chr7_1:74889365-74889384 None:intergenic 55.0%
CGATCGCGTTTCCGAAGAGA+AGG - chr7_1:74889427-74889446 None:intergenic 55.0%
!! CACCGAAGAAAAGCGCTGCT+AGG + chr7_1:74889855-74889874 Msa1038080:CDS 55.0%
! AAGCGCTGCTAGGGTTTCAG+AGG + chr7_1:74889865-74889884 Msa1038080:CDS 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr7_1:74890195-74890214 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr7_1:74890196-74890215 None:intergenic 55.0%
CGGTACCAAGTCGAGACTGA+TGG - chr7_1:74893053-74893072 None:intergenic 55.0%
TCATGGTGCAGAGAGAGGGA+AGG - chr7_1:74893189-74893208 None:intergenic 55.0%
GCTTGTCATGGTGCAGAGAG+AGG - chr7_1:74893194-74893213 None:intergenic 55.0%
CTCTCTGCACCATGACAAGC+AGG + chr7_1:74893194-74893213 Msa1038080:CDS 55.0%
GGGCACCTCAGACGAAATGT+AGG - chr7_1:74893932-74893951 None:intergenic 55.0%
TCCGCGCAGATTATGCTGCA+AGG + chr7_1:74894226-74894245 Msa1038080:CDS 55.0%
!! TCAGGATCTGCTCTGGAACC+TGG + chr7_1:74894921-74894940 Msa1038080:intron 55.0%
ACTCCTGCCCAACTACAACC+TGG - chr7_1:74895390-74895409 None:intergenic 55.0%
TCTACTACAGCAGCCGGTTG+AGG + chr7_1:74895438-74895457 Msa1038080:CDS 55.0%
AAGCCTGTAGAAGCTGTGGG+AGG + chr7_1:74895892-74895911 Msa1038080:intron 55.0%
AGCCTGTAGAAGCTGTGGGA+GGG + chr7_1:74895893-74895912 Msa1038080:intron 55.0%
TTCCCTCCCACAGCTTCTAC+AGG - chr7_1:74895898-74895917 None:intergenic 55.0%
!! CCGGAACAAACCTCTGAAGC+AGG - chr7_1:74896922-74896941 None:intergenic 55.0%
AAGGTCCGGGGTTCAAACCA+CGG - chr7_1:74897440-74897459 None:intergenic 55.0%
GTGAGCTTAGCTCGGTTGGT+AGG - chr7_1:74897482-74897501 None:intergenic 55.0%
CCTTGTGAGCTTAGCTCGGT+TGG - chr7_1:74897486-74897505 None:intergenic 55.0%
CCAACCGAGCTAAGCTCACA+AGG + chr7_1:74897483-74897502 Msa1038080:intron 55.0%
AAGGAGGCCATGAGGAAGAG+TGG + chr7_1:74897876-74897895 Msa1038080:CDS 55.0%
!! GGAAGAGTGGAGGCATTCAG+TGG + chr7_1:74897889-74897908 Msa1038080:CDS 55.0%
GACTTGCCCCATAGTTCAGC+TGG + chr7_1:74899056-74899075 Msa1038080:CDS 55.0%
! AGTGCTGAACTGTGTGCCAC+TGG + chr7_1:74899393-74899412 Msa1038080:intron 55.0%
ACTAGGAGGAGTCAGCTCCA+TGG - chr7_1:74899630-74899649 None:intergenic 55.0%
! ATGGAGCTGACTCCTCCTAG+TGG + chr7_1:74899629-74899648 Msa1038080:intron 55.0%
! TGGAGCTGACTCCTCCTAGT+GGG + chr7_1:74899630-74899649 Msa1038080:intron 55.0%
! TGAGAAGAAAGGCGCGGATG+AGG + chr7_1:74900825-74900844 Msa1038080:CDS 55.0%
!! GAGAGCGCCAGAGTTTGGCT+AGG - chr7_1:74889360-74889379 None:intergenic 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr7_1:74890200-74890219 Msa1038080:intron 60.0%
CTGCTGTGCTCATGCGAAGC+AGG + chr7_1:74891290-74891309 Msa1038080:CDS 60.0%
GGGGCTCAACCTGCTTGTCA+TGG - chr7_1:74893206-74893225 None:intergenic 60.0%
TGCAGCCATCACCAGCACAG+TGG + chr7_1:74896846-74896865 Msa1038080:intron 60.0%
!! CAGCTAGGTTTTGGTGGGGC+TGG + chr7_1:74897833-74897852 Msa1038080:intron 60.0%
GAGGCCATGAGGAAGAGTGG+AGG + chr7_1:74897879-74897898 Msa1038080:CDS 60.0%
GGTAACAGCTCCCCAGAAGG+TGG - chr7_1:74897998-74898017 None:intergenic 60.0%
! GGAGCTGACTCCTCCTAGTG+GGG + chr7_1:74899631-74899650 Msa1038080:intron 60.0%
! GAAGAAAGGCGCGGATGAGG+CGG + chr7_1:74900828-74900847 Msa1038080:CDS 60.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr7_1:74890201-74890220 Msa1038080:intron 65.0%
GGTGGCCGTGGTTTGAACCC+CGG + chr7_1:74897432-74897451 Msa1038080:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 74889222 74901393 74889222 ID=Msa1038080;Name=Msa1038080
chr7_1 mRNA 74889222 74901393 74889222 ID=Msa1038080-mRNA-1;Parent=Msa1038080;Name=Msa1038080-mRNA-1;_AED=0.15;_eAED=0.15;_QI=249|0.93|0.93|1|0.93|0.87|16|337|701
chr7_1 exon 74889222 74889467 74889222 ID=Msa1038080-mRNA-1:exon:18978;Parent=Msa1038080-mRNA-1
chr7_1 exon 74889845 74889982 74889845 ID=Msa1038080-mRNA-1:exon:18979;Parent=Msa1038080-mRNA-1
chr7_1 exon 74891204 74891434 74891204 ID=Msa1038080-mRNA-1:exon:18980;Parent=Msa1038080-mRNA-1
chr7_1 exon 74892901 74893215 74892901 ID=Msa1038080-mRNA-1:exon:18981;Parent=Msa1038080-mRNA-1
chr7_1 exon 74893654 74893761 74893654 ID=Msa1038080-mRNA-1:exon:18982;Parent=Msa1038080-mRNA-1
chr7_1 exon 74894195 74894384 74894195 ID=Msa1038080-mRNA-1:exon:18983;Parent=Msa1038080-mRNA-1
chr7_1 exon 74894701 74894897 74894701 ID=Msa1038080-mRNA-1:exon:18984;Parent=Msa1038080-mRNA-1
chr7_1 exon 74895391 74895502 74895391 ID=Msa1038080-mRNA-1:exon:18985;Parent=Msa1038080-mRNA-1
chr7_1 exon 74896851 74896930 74896851 ID=Msa1038080-mRNA-1:exon:18986;Parent=Msa1038080-mRNA-1
chr7_1 exon 74897836 74898078 74897836 ID=Msa1038080-mRNA-1:exon:18987;Parent=Msa1038080-mRNA-1
chr7_1 exon 74898155 74898231 74898155 ID=Msa1038080-mRNA-1:exon:18988;Parent=Msa1038080-mRNA-1
chr7_1 exon 74898986 74899077 74898986 ID=Msa1038080-mRNA-1:exon:18989;Parent=Msa1038080-mRNA-1
chr7_1 exon 74899806 74899888 74899806 ID=Msa1038080-mRNA-1:exon:18990;Parent=Msa1038080-mRNA-1
chr7_1 exon 74900134 74900205 74900134 ID=Msa1038080-mRNA-1:exon:18991;Parent=Msa1038080-mRNA-1
chr7_1 exon 74900763 74900888 74900763 ID=Msa1038080-mRNA-1:exon:18992;Parent=Msa1038080-mRNA-1
chr7_1 exon 74901012 74901393 74901012 ID=Msa1038080-mRNA-1:exon:18993;Parent=Msa1038080-mRNA-1
chr7_1 five_prime_UTR 74889222 74889467 74889222 ID=Msa1038080-mRNA-1:five_prime_utr;Parent=Msa1038080-mRNA-1
chr7_1 five_prime_UTR 74889845 74889847 74889845 ID=Msa1038080-mRNA-1:five_prime_utr;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74889848 74889982 74889848 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74891204 74891434 74891204 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74892901 74893215 74892901 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74893654 74893761 74893654 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74894195 74894384 74894195 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74894701 74894897 74894701 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74895391 74895502 74895391 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74896851 74896930 74896851 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74897836 74898078 74897836 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74898155 74898231 74898155 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74898986 74899077 74898986 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74899806 74899888 74899806 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74900134 74900205 74900134 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74900763 74900888 74900763 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 CDS 74901012 74901056 74901012 ID=Msa1038080-mRNA-1:cds;Parent=Msa1038080-mRNA-1
chr7_1 three_prime_UTR 74901057 74901393 74901057 ID=Msa1038080-mRNA-1:three_prime_utr;Parent=Msa1038080-mRNA-1
Gene Sequence

>Msa1038080

ATGGGAGCACCGAAGAAAAGCGCTGCTAGGGTTTCAGAGGACCACGATGAGCTTGTTCGTGTTCCGTTACAGGCGATTCTGTTGGCTGATAGTTTTACTACCAAGTTTAGACCTATCACTCTTGAACGCCCCAAGGTGCTTTTACCATTGGCGAATGTTCCAATGATAAATTACACATTGACATGGCTTGAATCAGCTGGTGTAGAAGAGGTTTTTGTTTTCTGCTGTGCTCATGCGAAGCAGGTGATTAACTATTTGGAGAAATCTGAGTGGTTTAATCAACCTAATTTTACTGTAACAACTATTGAGTCTCAAAATTGTGTCAGTGCTGGAGATGCACTGCGTATTATATACGAGCGCAACGTGATACAAGGAGACTTTGTCCTTATCAGTGGAGATACTGTAAGCAACATGTCGCTTACTCAGGCACTTTTAGAACATAAAGAAAGGAAGAAGAAAGATAGTAATGCTGTAATGACCATGGTTATTAAACGGTCAAAAACTCATCCAGCTATCCATCAGTCTCGACTTGGTACCGATGAAATTTTCATGGCTATTGATCCTAATACCAAGCAACTTTTGTATTACGAGGATAAAGCAGACTTCTCAAAAGGCACTCTACATCTTGAAAATTCATTGCTTGCTGATAATCCTTCCCTCTCTCTGCACCATGACAAGCAGGATTGTTACATTGACATCTGCTCGCCGGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTTCGGCGTCATTTTGTCAAGGGACTGCTTCTTGATGATATAATGGGATACAAAATTTTTGTTCATGAAATCCGCGCAGATTATGCTGCAAGGATTGATAATTTCCGAAGTTATGACACTGTCAGCAAGGATATAATTCATAGATGGACATATCCACTGGTACCAGATGTTATGAATTTTGGCAACACAGCTACTAAGCTTGAAAGACAAGGAATATACCGTGGCTCGGATATTTCGCAAGCACAATCAGCTGTTGTTGGCCCATTCTCTGTTATAGGATCTGGCACCAAAATTGGCAAGAACACGAAGATTTTAAATTCCGTCGTCGGAGTAGGATGCAAAATCGGGTCAAATGTACACATAGAGGGATGCTATATATGGGACAATGTCACCATAGAAGATGGCTGTGAACTTAGGCATGCCATTGTTGTAGTTGGGCAGGAGTTTGTTGTTCCTCCTTATTCACAAGTATCTCTACTACAGCAGCCGGTTGAGGAAGATAGCGACGAAGAGCTCGAATATGCTGATAGTACTAGTGCCATCACCAGCACAGTGGATAAGTCAGATGGAGAAACTGCTTCTGAATTATTGGATGGACATTTTAACCCTGCTTCAGAGCTAGGTTTTGGTGGGGCTGGTTATGTTTGGCCAAAATGTGAAGGAGGCCATGAGGAAGAGTGGAGGCATTCAGTGGCACCTATTACTGAAGATAAAATTTTGGAGGCAATGAAAGCTATGGAAGATGAACTGGAGTTAATTCATGATGGAAGTATTCTTCCACCTTCTGGGGAGCTGTTACCTAATCCTAATGATTCAGATGACGATGATAATGATGATTTAAGAGATGACTTTGACAAAGAGGTTGAAGCAACTTTTCTGAGGGCTGTGCTTGAAAACATACAAGAAAACCATTTGACTTTAGAAGTCAATTCTTTGAAGTTGTCATACAACAAGATAGCTGCTGATTGTGCTGGAGCTTTATTTTATGCAATGATGAAGTATGCTGTAGACTTGCCCCATAGTTCAGCTGATGGCTTGGTTCAGAATGTTCATGTTGTACTTACCAAGTGGAAAAAGGTTCTTGCATCCTATCTGAATGATACGGACGAGCAGATCGAAGTGATTCTAAAATTTGAAGAAATGTGTTTGGAATCTGCGAAGGAGTTTGCTCCATTGTTCACAAAGATATTGCACTACATGTATAACGAGGATATTATTGAAGAAGATGCTATTTTGAGTTGGGAAGATGAGAAGAAAGGCGCGGATGAGGCGGATAAAGTATTTGTTAACCAAGCTCAACCATTAATTCAATGGCTAAAAGAGGCTCCCGAAGAAGACGATGAAGACGAAGAGTAG
Protein sequence

>Msa1038080

MGAPKKSAARVSEDHDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLANVPMINYTLTWLESAGVEEVFVFCCAHAKQVINYLEKSEWFNQPNFTVTTIESQNCVSAGDALRIIYERNVIQGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKTHPAIHQSRLGTDEIFMAIDPNTKQLLYYEDKADFSKGTLHLENSLLADNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIRADYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGIYRGSDISQAQSAVVGPFSVIGSGTKIGKNTKILNSVVGVGCKIGSNVHIEGCYIWDNVTIEDGCELRHAIVVVGQEFVVPPYSQVSLLQQPVEEDSDEELEYADSTSAITSTVDKSDGETASELLDGHFNPASELGFGGAGYVWPKCEGGHEEEWRHSVAPITEDKILEAMKAMEDELELIHDGSILPPSGELLPNPNDSDDDDNDDLRDDFDKEVEATFLRAVLENIQENHLTLEVNSLKLSYNKIAADCAGALFYAMMKYAVDLPHSSADGLVQNVHVVLTKWKKVLASYLNDTDEQIEVILKFEEMCLESAKEFAPLFTKILHYMYNEDIIEEDAILSWEDEKKGADEADKVFVNQAQPLIQWLKEAPEEDDEDEE*