AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0011160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011160 MtrunA17_Chr1g0159721 93.692 2061 84 10 1 2053 1 2023 0.0 3726
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011160 AT1G21580.1 44.888 851 381 24 1215 2039 1377 2165 1.38e-179 602
Msa0011160 AT1G21580.4 46.066 699 317 20 1215 1891 1377 2037 5.14e-151 518
Msa0011160 AT1G21580.7 44.662 665 308 20 1215 1857 1377 2003 2.02e-130 456
Msa0011160 AT1G21580.8 44.662 665 308 20 1215 1857 1377 2003 2.02e-130 456
Msa0011160 AT1G21580.3 41.714 700 346 21 1215 1892 1377 2036 5.70e-120 423
Msa0011160 AT1G21580.6 41.714 700 346 21 1215 1892 1377 2036 5.70e-120 423
Msa0011160 AT1G21580.5 43.558 652 308 20 1215 1844 1377 1990 6.56e-120 423
Msa0011160 AT1G21580.2 43.558 652 308 20 1215 1844 1377 1990 6.56e-120 423
Msa0011160 AT1G21580.9 29.305 331 187 15 1215 1530 1377 1675 1.95e-13 77.0

Find 532 sgRNAs with CRISPR-Local

Find 884 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATGTGGGTTCTGTTTC+TGG 0.100351 1_1:+16839123 Msa0011160:CDS
CGTCGTCTTTCTTATGTTCT+TGG 0.155506 1_1:-16840985 None:intergenic
CCTTGGAATGTAACCTCTTT+TGG 0.157292 1_1:-16846351 None:intergenic
AATTTCCGAGTTCGTTTCTT+TGG 0.166773 1_1:-16846648 None:intergenic
GAAATTACGTAACCTAATTT+TGG 0.177193 1_1:-16838046 None:intergenic
TGCCTAAGTTTGCAGGCTTC+TGG 0.188482 1_1:-16848016 None:intergenic
TTACGAATGTAAGAAGTATT+TGG 0.188992 1_1:-16842033 None:intergenic
TTAGCACAATGAATCAATTT+TGG 0.190053 1_1:+16847264 Msa0011160:intron
CTCTACCAACCCACCATCTT+TGG 0.198233 1_1:+16842161 Msa0011160:CDS
CTCTTCTTGTAATAGCTATC+AGG 0.201390 1_1:-16842636 None:intergenic
CGGACACTTCAGAGGATTTC+AGG 0.205586 1_1:+16845748 Msa0011160:CDS
CCAAGTGAAATATTAGAATT+TGG 0.208398 1_1:-16840530 None:intergenic
GATTGAAATTCAGTTAAATT+TGG 0.214994 1_1:-16840896 None:intergenic
TATGATTGAAATTGAATTAT+TGG 0.216401 1_1:-16837976 None:intergenic
GGGGTTGTCCATGCCGAATT+TGG 0.225376 1_1:+16839707 Msa0011160:CDS
TTGACCATAGATACGCTATT+TGG 0.228185 1_1:-16841607 None:intergenic
AAATGGTTTGACTTTGAATT+TGG 0.233778 1_1:+16840607 Msa0011160:CDS
GGCGTTATATTCCTTGGTAC+TGG 0.234282 1_1:-16841718 None:intergenic
GTCAGAATTCACTACGTTAT+TGG 0.236901 1_1:-16842718 None:intergenic
AACATCTCTATAATGGTAAT+TGG 0.242165 1_1:-16841320 None:intergenic
GGGTTGTCCATGCCGAATTT+GGG 0.245545 1_1:+16839708 Msa0011160:CDS
TATTCCTGTGACCTGCATTC+TGG 0.246060 1_1:-16839732 None:intergenic
ATTCTAATGGTAATTTCTTC+AGG 0.246906 1_1:+16838950 Msa0011160:CDS
TTCCACTTGCCTAAGTTTGC+AGG 0.249050 1_1:-16848023 None:intergenic
CGGAATCGATCGTCGGGATT+AGG 0.249622 1_1:-16838364 None:intergenic
GAATAACCCTTGAAAGCTTT+AGG 0.259333 1_1:-16841838 None:intergenic
TGTATCACTGTTCACCAATT+TGG 0.262189 1_1:+16840425 Msa0011160:CDS
GAGGAGGAGGGTGGTGATGG+TGG 0.263725 1_1:-16838405 None:intergenic
TTAGGGTTCCAGGCGGGTTG+AGG 0.267332 1_1:-16838340 None:intergenic
TGTAGGAGAACGTATATTTC+GGG 0.268613 1_1:+16845690 Msa0011160:intron
AGTATTTGACACATATGTTT+TGG 0.275115 1_1:-16842253 None:intergenic
CTGAGTCTACGGATGCAAAT+AGG 0.277487 1_1:+16841113 Msa0011160:CDS
AAAGAAACGAACTCGGAAAT+TGG 0.282079 1_1:+16846650 Msa0011160:CDS
AAGGCTACTAAGTTATTAAA+TGG 0.282415 1_1:+16839924 Msa0011160:CDS
CTTCTTCTTGACAACCTTAG+AGG 0.285482 1_1:-16839451 None:intergenic
GAATGAGCTTGGGCTGGTTC+TGG 0.292024 1_1:-16841739 None:intergenic
GGGATTAGGGTTAGGGTTCC+AGG 0.293438 1_1:-16838350 None:intergenic
GATGTTAAGACTGGTTTAAA+TGG 0.299249 1_1:+16840590 Msa0011160:CDS
AATGCTAATAAGAATACTTT+GGG 0.301783 1_1:+16839339 Msa0011160:CDS
TTTAGGAGACACTAGGATTC+AGG 0.303381 1_1:+16840328 Msa0011160:CDS
AATAACCCTTGAAAGCTTTA+GGG 0.303613 1_1:-16841837 None:intergenic
AAACAAACAAAACCAAAATT+AGG 0.303791 1_1:+16838034 Msa0011160:five_prime_UTR
GGATAGGAAGGAGGAGGAGG+AGG 0.303843 1_1:-16838427 None:intergenic
TGACAGTGATGATGAAAATA+AGG 0.307986 1_1:+16840832 Msa0011160:CDS
GAGGAGGGTGGTGATGGTGG+TGG 0.310107 1_1:-16838402 None:intergenic
AACGACGGAGCTTCTGATAT+TGG 0.311516 1_1:+16839759 Msa0011160:CDS
ATTGGATGAGAATCTTTGTT+AGG 0.316002 1_1:-16838103 None:intergenic
TCAGAATTCACTACGTTATT+GGG 0.316436 1_1:-16842717 None:intergenic
CAGGAATAGTTCCTCCTAAA+AGG 0.317191 1_1:+16841986 Msa0011160:CDS
ACCGCAGCGCCTTCAACTTC+CGG 0.323860 1_1:+16839099 Msa0011160:CDS
GTTTCCTTTCCTGAACTTGT+AGG 0.327795 1_1:-16840164 None:intergenic
GTGTAGGAGAACGTATATTT+CGG 0.329890 1_1:+16845689 Msa0011160:intron
TCCTCGTAAATTGGCCTCTA+AGG 0.330478 1_1:+16839437 Msa0011160:CDS
GGGTTCCAGGCGGGTTGAGG+GGG 0.330483 1_1:-16838337 None:intergenic
ATGATTGAAATTGAATTATT+GGG 0.331726 1_1:-16837975 None:intergenic
TAGGGTTCCAGGCGGGTTGA+GGG 0.332335 1_1:-16838339 None:intergenic
CGATCGTCGGGATTAGGGTT+AGG 0.332454 1_1:-16838358 None:intergenic
TCCAGTGATCCTACAAGTTC+AGG 0.333490 1_1:+16840155 Msa0011160:CDS
TGTCAAAACGGGAACTTGTT+TGG 0.333741 1_1:+16839608 Msa0011160:CDS
CCCACCAATGCCTAAAACTT+TGG 0.334525 1_1:-16845283 None:intergenic
AACCAAGAGTTCTGAGCATT+TGG 0.337855 1_1:+16841138 Msa0011160:CDS
GGTAATTTCTTCAGGGGTAA+TGG 0.338857 1_1:+16838958 Msa0011160:CDS
TTGACCGTGGTGGTGGTAAT+TGG 0.339726 1_1:-16838515 None:intergenic
GTGGAAACACCGTCACGTTC+TGG 0.339862 1_1:-16838574 None:intergenic
AACACAGAAAACTGAACATT+TGG 0.343499 1_1:-16841211 None:intergenic
TGCATTGGCTGAAGATAAAA+AGG 0.344334 1_1:+16839683 Msa0011160:CDS
GGAGTCTTTGTCTTCGACTT+TGG 0.344678 1_1:-16841871 None:intergenic
GCTTGTTCCCACAATCTAAC+TGG 0.347979 1_1:-16839965 None:intergenic
AGGAAGGTTTCCCTAGGGTT+AGG 0.348257 1_1:-16838478 None:intergenic
CATCCTTCATGATACCAAAT+TGG 0.348428 1_1:-16840439 None:intergenic
TGTGAAAATGCATCTGATCT+TGG 0.349747 1_1:+16842366 Msa0011160:CDS
AGAGTTTAATCATCATAATC+AGG 0.350016 1_1:+16838804 Msa0011160:CDS
GTCACAATTCTCAGCAGATA+TGG 0.352531 1_1:-16840492 None:intergenic
ATCTTGTACGGTGGTCTTGA+TGG 0.354807 1_1:-16838168 None:intergenic
TGGTACTCATACTCGTAAAT+TGG 0.355062 1_1:+16839266 Msa0011160:CDS
TTATGAGTCAATTTGCAGTT+TGG 0.355985 1_1:-16846855 None:intergenic
GAGATGAACATAAACCATTC+AGG 0.356110 1_1:-16846833 None:intergenic
GGATTTGCCTTACGCTTTAT+CGG 0.356820 1_1:+16841483 Msa0011160:CDS
ACATCTCGGTTCCTATGATT+AGG 0.357902 1_1:-16838904 None:intergenic
CTGCATTCTGGCCCCAAATT+CGG 0.358963 1_1:-16839720 None:intergenic
AAGAAGAAGAAAGCTGTTTC+TGG 0.361654 1_1:+16839303 Msa0011160:CDS
GAGGAAGAGAAGAACGATAA+AGG 0.362193 1_1:-16838252 None:intergenic
CGGTACTGGTCCTCGTAAAT+TGG 0.363647 1_1:+16839428 Msa0011160:CDS
CGTTATGTTAATGATTCTAA+TGG 0.363794 1_1:+16838937 Msa0011160:CDS
GGAATTGGAGCACTCGGATA+TGG 0.364124 1_1:+16841159 Msa0011160:CDS
ATTTGCAGATATGTTCGAAT+TGG 0.364842 1_1:+16846600 Msa0011160:intron
ATTTCCGAGTTCGTTTCTTT+GGG 0.365094 1_1:-16846647 None:intergenic
ATATTACTTGTATGCTCAAT+TGG 0.365551 1_1:-16841262 None:intergenic
TTCACATTGACATGTCTATA+TGG 0.366726 1_1:-16847115 None:intergenic
GTAATTTCTTCAGGGGTAAT+GGG 0.369477 1_1:+16838959 Msa0011160:CDS
AACTTTGCTATTATAGAAAC+AGG 0.370339 1_1:-16847976 None:intergenic
CCCGTTGAAATTTCTGAACC+TGG 0.370725 1_1:+16847772 Msa0011160:CDS
GATTCTGGCGGAATCAATTC+TGG 0.370955 1_1:-16838596 None:intergenic
TGAGTTTGAGTGGGTAGGCT+TGG 0.371207 1_1:-16837949 None:intergenic
TGCCTCAATCGGTACAAGTT+TGG 0.372418 1_1:+16846325 Msa0011160:CDS
GAATGCTAATAAGAATACTT+TGG 0.372923 1_1:+16839338 Msa0011160:CDS
GGAATCGATCGTCGGGATTA+GGG 0.373289 1_1:-16838363 None:intergenic
GAGTTCTGAGCATTTGGAAT+TGG 0.373830 1_1:+16841144 Msa0011160:CDS
CAACCATTCCACTGCTTGGC+AGG 0.375150 1_1:-16840295 None:intergenic
TTTCACTTGGATTCGATGTA+AGG 0.376164 1_1:+16840543 Msa0011160:CDS
TCTCACTATCCAACCAGGTT+GGG 0.377057 1_1:+16840750 Msa0011160:CDS
AGTATTGTAGATAGAATTAG+TGG 0.379227 1_1:+16839840 Msa0011160:CDS
AACTCAGTAATCATTCTATC+TGG 0.380225 1_1:-16841538 None:intergenic
TCCTGCCCTGCCGATGGTAT+TGG 0.380356 1_1:+16841424 Msa0011160:CDS
ACCTTTATGCGACCGCCTCT+TGG 0.382389 1_1:-16842781 None:intergenic
GTAAAGGTAACAGTCTTGTT+AGG 0.382747 1_1:+16842052 Msa0011160:CDS
TGAGTCTACGGATGCAAATA+GGG 0.383567 1_1:+16841114 Msa0011160:CDS
GGATTTGGTATTTCAAGAAC+AGG 0.384178 1_1:+16847285 Msa0011160:CDS
TCTACCAACCCACCATCTTT+GGG 0.384872 1_1:+16842162 Msa0011160:CDS
GAAGAGAAGGTGGTGGAGGA+AGG 0.385897 1_1:-16838210 None:intergenic
ATTTGTGAAGGGTTTCTTAA+GGG 0.386422 1_1:+16847151 Msa0011160:CDS
TTCTGCAAAGCCTAATAGTT+CGG 0.389020 1_1:+16839503 Msa0011160:CDS
TCTGGAAATGACAGGGACTC+TGG 0.389461 1_1:+16844966 Msa0011160:CDS
GAGGAGGAGGAGGGTGGTGA+TGG 0.391118 1_1:-16838408 None:intergenic
TTCCAAATGCTCAGAACTCT+TGG 0.391163 1_1:-16841140 None:intergenic
CCTTCACAAATAGATGCCTT+AGG 0.391268 1_1:-16847139 None:intergenic
ATTTGAGGTATAGCAGAAAC+TGG 0.393601 1_1:-16842138 None:intergenic
GGTGGATAGGAAGGAGGAGG+AGG 0.394798 1_1:-16838430 None:intergenic
ATTTAGATGTAGGATGTTCA+TGG 0.394938 1_1:+16840027 Msa0011160:CDS
ATGATGATGAAAACATTTGC+GGG 0.395119 1_1:+16841572 Msa0011160:CDS
TCACTCTGTTGAGGATGTCT+TGG 0.396450 1_1:-16847808 None:intergenic
AATTCTGCTGGAATCGATTC+TGG 0.396836 1_1:-16838611 None:intergenic
GCATCATTTGAATGGCTAAC+TGG 0.398616 1_1:-16840647 None:intergenic
TATTTGTGAAGGGTTTCTTA+AGG 0.399181 1_1:+16847150 Msa0011160:CDS
TTTGCACAACATCTCTATAA+TGG 0.400613 1_1:-16841327 None:intergenic
GCTCAGTCGATACCTTATTC+AGG 0.405176 1_1:+16841046 Msa0011160:CDS
GAGTTTGAGTGGGTAGGCTT+GGG 0.405551 1_1:-16837948 None:intergenic
TGATGTTGGATCGTCTAGTT+TGG 0.406190 1_1:+16840397 Msa0011160:CDS
TTCAAATAATGAATTGATTG+AGG 0.408245 1_1:+16841462 Msa0011160:CDS
GGGCGTGTTGGCTCCACCTT+CGG 0.409817 1_1:+16839524 Msa0011160:CDS
TTCTTCCTACTCTTTGTTTG+AGG 0.409887 1_1:-16845525 None:intergenic
ACGACGGAGCTTCTGATATT+GGG 0.411615 1_1:+16839760 Msa0011160:CDS
GGTTCTGGCGTTATATTCCT+TGG 0.411878 1_1:-16841724 None:intergenic
GGAGGAAGAGAAGGTGGTGG+AGG 0.414765 1_1:-16838214 None:intergenic
TTTGAGGGATCATGAATGTA+AGG 0.416603 1_1:-16846789 None:intergenic
TTAGCAGTATCACCTGAATA+AGG 0.416885 1_1:-16841058 None:intergenic
GATCGTCGGGATTAGGGTTA+GGG 0.418421 1_1:-16838357 None:intergenic
TGGAAGGAGGTTCTAGCAAC+GGG 0.418485 1_1:-16842335 None:intergenic
AGGAGAGGCTGAGGAGGAGG+AGG 0.423094 1_1:-16838232 None:intergenic
GGGATACGGCGGTGTTCGAG+GGG 0.423468 1_1:-16838316 None:intergenic
GTGTAATTCTGTTCCTGACT+TGG 0.424573 1_1:+16839881 Msa0011160:CDS
AAATCCAAATAGCGTATCTA+TGG 0.426676 1_1:+16841603 Msa0011160:CDS
GCCTCTGAAAATGTCAAAAC+GGG 0.427252 1_1:+16839597 Msa0011160:CDS
AGAATATGAAACCTAATCAT+AGG 0.427336 1_1:+16838893 Msa0011160:CDS
GGAAGGTTTCCCTAGGGTTA+GGG 0.427591 1_1:-16838477 None:intergenic
AATTGAGGAGATTGATGAAA+AGG 0.429146 1_1:-16838283 None:intergenic
GCATTTGCTTCCTTGAGTAC+AGG 0.431437 1_1:-16847656 None:intergenic
AGCTATCAGGGATGGCCGTT+TGG 0.432198 1_1:-16842623 None:intergenic
GTGAAAATGCATCTGATCTT+GGG 0.432844 1_1:+16842367 Msa0011160:CDS
TGTCATCCCTAAAGCTTTCA+AGG 0.434792 1_1:+16841831 Msa0011160:CDS
CTTACGAGCCAACCGCTGTC+TGG 0.435458 1_1:-16846706 None:intergenic
AGGGTTCCAGGCGGGTTGAG+GGG 0.437472 1_1:-16838338 None:intergenic
ATTGAGGAGATTGATGAAAA+GGG 0.437565 1_1:-16838282 None:intergenic
GATACAGAATGGATCCTTCC+AGG 0.437592 1_1:+16845725 Msa0011160:CDS
TCACAATTCTCAGCAGATAT+GGG 0.437653 1_1:-16840491 None:intergenic
GTTCCCGTTGCGTCAAAACT+TGG 0.437909 1_1:-16847634 None:intergenic
TCTGGTGAAGCTAGCGGTAC+TGG 0.442774 1_1:+16839414 Msa0011160:CDS
TCTGCAAAGCCTAATAGTTC+GGG 0.443528 1_1:+16839504 Msa0011160:CDS
AAAGCCTAAAACAAATCAAT+TGG 0.444262 1_1:+16842551 Msa0011160:CDS
GAAAATCAATGCTGTTGATA+AGG 0.444644 1_1:+16839635 Msa0011160:CDS
CCAAAAGAGGTTACATTCCA+AGG 0.445326 1_1:+16846351 Msa0011160:CDS
GGTGGAGGAAGGTGGTGAAT+CGG 0.445758 1_1:-16838199 None:intergenic
ATAGTAAAGTACTTCGCAAT+AGG 0.446428 1_1:+16842751 Msa0011160:CDS
CTTAAGGGATATTGTGCTGA+TGG 0.446744 1_1:+16847166 Msa0011160:CDS
TGAGGAGGAGGAGGAAGAGA+AGG 0.448040 1_1:-16838223 None:intergenic
AATGCATTCCCTTGATCGTC+TGG 0.448210 1_1:-16839666 None:intergenic
AAAAGAAGAGTGCTTTGCTT+AGG 0.449732 1_1:+16838866 Msa0011160:CDS
ATATCAACATCCACTTCAAC+GGG 0.450422 1_1:-16839036 None:intergenic
CCAAATTCTAATATTTCACT+TGG 0.450719 1_1:+16840530 Msa0011160:CDS
AACGGTAGAGGGCGTTACTT+TGG 0.450943 1_1:+16847742 Msa0011160:CDS
GGGAAAGATCAACATGGAAG+AGG 0.453088 1_1:+16838979 Msa0011160:CDS
GGGTGTGCTTGGCACTATAA+AGG 0.453977 1_1:+16847306 Msa0011160:CDS
ACAAGTTTGGTTTCCAAAAG+AGG 0.454779 1_1:+16846338 Msa0011160:CDS
AAACTGCTCCATCTAGCAAT+CGG 0.456022 1_1:+16842463 Msa0011160:CDS
TCCAAGAGGCGGTCGCATAA+AGG 0.456266 1_1:+16842780 Msa0011160:CDS
AATAGTAATCTTGTAGATGT+AGG 0.457584 1_1:+16840050 Msa0011160:CDS
CTCTACACAATGTGAGGACT+TGG 0.457730 1_1:+16841183 Msa0011160:CDS
ATTTGAGGTATGGCAGCAAC+TGG 0.457935 1_1:-16842084 None:intergenic
TTTCCTATCACTAATCTCCT+TGG 0.458417 1_1:-16846368 None:intergenic
TTCAACTTCCGGTGTTGATG+TGG 0.459438 1_1:+16839110 Msa0011160:CDS
TGACACTCCCGATTGCTAGA+TGG 0.459681 1_1:-16842471 None:intergenic
TGCCTCTGAAAATGTCAAAA+CGG 0.460588 1_1:+16839596 Msa0011160:CDS
TTGGATGAGAATCTTTGTTA+GGG 0.461972 1_1:-16838102 None:intergenic
AGATCATTCTATTCAAAGCC+TGG 0.462151 1_1:+16840721 Msa0011160:CDS
ACACCGTCACGTTCTGGATA+AGG 0.462452 1_1:-16838568 None:intergenic
GATTATCGTGATTCTGAAAC+GGG 0.463143 1_1:+16838736 Msa0011160:CDS
GGTTCCAGGCGGGTTGAGGG+GGG 0.463376 1_1:-16838336 None:intergenic
TTCTAATGGTAATTTCTTCA+GGG 0.464150 1_1:+16838951 Msa0011160:CDS
GTTGGGGACACAGCTTTACA+TGG 0.464219 1_1:+16840767 Msa0011160:CDS
AGGAAGTCAGATCATGCAAT+TGG 0.464297 1_1:+16841685 Msa0011160:CDS
TTTCTTCTTCTTCACAACCT+TGG 0.464922 1_1:-16839292 None:intergenic
GAAAAGAAAGATGTTAAGAC+TGG 0.465571 1_1:+16840581 Msa0011160:CDS
AACCCACCATCTTTGGGTTT+AGG 0.465960 1_1:+16842168 Msa0011160:CDS
TCTTTGGGTCTCTGATAAGT+TGG 0.466038 1_1:-16846632 None:intergenic
TATTGGGAGTTGCAACTGTC+TGG 0.466076 1_1:-16842701 None:intergenic
TGGTTATCACTGAAACAGAT+AGG 0.467543 1_1:-16840965 None:intergenic
ATTCCAAGGAGATTAGTGAT+AGG 0.468741 1_1:+16846365 Msa0011160:CDS
GCAGATATGGGGACTTCACC+AGG 0.469186 1_1:-16840479 None:intergenic
CCAGGTTCAGAAATTTCAAC+GGG 0.469421 1_1:-16847772 None:intergenic
TCATCCTTCGCCAATTCAAA+AGG 0.469650 1_1:-16838691 None:intergenic
CTGATATTGGGAAAGAATCC+AGG 0.469998 1_1:+16839772 Msa0011160:CDS
CACAGTTGACCAATCATTTG+AGG 0.470258 1_1:+16847888 Msa0011160:CDS
ATTCGATGTGGAAGCGGTTG+TGG 0.470364 1_1:-16838542 None:intergenic
CCTTCTGTTATCAATTCTGC+TGG 0.470705 1_1:-16838623 None:intergenic
ATCTAATGATCTCGATAAGA+AGG 0.471023 1_1:+16841372 Msa0011160:CDS
GAGAAGGTGGTGGAGGAAGG+TGG 0.471754 1_1:-16838207 None:intergenic
AATTGCTTCTGTTGAGAAAG+AGG 0.472918 1_1:+16845214 Msa0011160:CDS
GAAATCAACCAGTTAGATTG+TGG 0.473414 1_1:+16839957 Msa0011160:CDS
ATTAAGAGAGTGGTGAAGAA+AGG 0.473761 1_1:+16839480 Msa0011160:CDS
CATTCAAATGATGCTGATAG+AGG 0.475013 1_1:+16840656 Msa0011160:CDS
AACAGTACACAGGTCTGATC+TGG 0.476378 1_1:-16837923 None:intergenic
GGAGGAGGAGGAAGAGAAGG+TGG 0.476455 1_1:-16838220 None:intergenic
GAAGGGTGATTCACTTGCTC+AGG 0.477489 1_1:+16841390 Msa0011160:CDS
TGTAACTTTGGAATGAGCTT+GGG 0.477796 1_1:-16841749 None:intergenic
TCCTGAACTTGTAGGATCAC+TGG 0.478149 1_1:-16840156 None:intergenic
AGTGGGAATAATGACATTGA+TGG 0.478343 1_1:+16840194 Msa0011160:CDS
AGTGAAGTATCTCTATCGCC+TGG 0.479019 1_1:+16839999 Msa0011160:CDS
AAACTGCAAATTGACTCATA+AGG 0.479230 1_1:+16846857 Msa0011160:CDS
TTTGTCTTCGACTTTGGAAA+GGG 0.480071 1_1:-16841865 None:intergenic
ACCGATTGAGGCAGAGGATA+GGG 0.480266 1_1:-16846315 None:intergenic
GGGTTTAGGCGAAACACCTA+AGG 0.480506 1_1:+16842182 Msa0011160:CDS
TTTCAAGAACAGGGTGTGCT+TGG 0.481375 1_1:+16847295 Msa0011160:CDS
CGAATTTGGGGCCAGAATGC+AGG 0.482199 1_1:+16839721 Msa0011160:CDS
TAGACCCAGAGGTGTAACTT+TGG 0.482799 1_1:-16841761 None:intergenic
TTCTCACTATCCAACCAGGT+TGG 0.482977 1_1:+16840749 Msa0011160:CDS
GGGGATACGGCGGTGTTCGA+GGG 0.483569 1_1:-16838317 None:intergenic
GGGATTGAGTTTGAGTGGGT+AGG 0.483667 1_1:-16837954 None:intergenic
GGAGGAGGAAGAGAAGGTGG+TGG 0.484630 1_1:-16838217 None:intergenic
GTCTGTACCAAGTTCCTGAA+TGG 0.484890 1_1:+16846819 Msa0011160:CDS
TCATTCCAAAGTTACACCTC+TGG 0.485623 1_1:+16841756 Msa0011160:CDS
TCCAATACCATCGGCAGGGC+AGG 0.486620 1_1:-16841425 None:intergenic
TGACGGTTCACGACGGCGAT+TGG 0.486992 1_1:-16838126 None:intergenic
TCCCTATCCTCTGCCTCAAT+CGG 0.487240 1_1:+16846314 Msa0011160:CDS
CACAGTTTCACCAACTGCAT+TGG 0.487734 1_1:-16839550 None:intergenic
GCGTTATATTCCTTGGTACT+GGG 0.488261 1_1:-16841717 None:intergenic
AAAATTCTTCTGGAAATGAC+AGG 0.489063 1_1:+16844958 Msa0011160:CDS
GTTTGAGGACCAACACAAGC+TGG 0.489116 1_1:-16845510 None:intergenic
ACTTGTACCGATTGAGGCAG+AGG 0.489706 1_1:-16846321 None:intergenic
GCCAACACGCCCGAACTATT+AGG 0.489845 1_1:-16839513 None:intergenic
GGTGGGTTGGTAGAGATTTG+AGG 0.491882 1_1:-16842153 None:intergenic
ACTTCCACCTCTTTCAAACC+TGG 0.492201 1_1:-16839790 None:intergenic
GAAACTGTGGTAGCAGATAG+TGG 0.492681 1_1:+16839564 Msa0011160:CDS
GAAGAAAAGTATTAAGAGAG+TGG 0.492788 1_1:+16839470 Msa0011160:CDS
TATTGGGGATTGAGTTTGAG+TGG 0.495724 1_1:-16837959 None:intergenic
GTGTCTGCGCCAGACGATCA+AGG 0.495742 1_1:+16839657 Msa0011160:CDS
AACCATTCCACTGCTTGGCA+GGG 0.495950 1_1:-16840294 None:intergenic
AGATGGTTCCTGTGTTCAAT+CGG 0.496581 1_1:+16840234 Msa0011160:CDS
TGAAGAGGAGATTTGAGGTA+TGG 0.496820 1_1:-16842094 None:intergenic
CTTCACAAATAGATGCCTTA+GGG 0.496991 1_1:-16847138 None:intergenic
ATGCCTTAAAATCTCGAACT+TGG 0.498298 1_1:+16841908 Msa0011160:CDS
TAAAGGAGAGGCTGAGGAGG+AGG 0.498533 1_1:-16838235 None:intergenic
ACATAAACCATTCAGGAACT+TGG 0.498869 1_1:-16846826 None:intergenic
CGACGTTGCATCGTCAAGCA+TGG 0.499082 1_1:+16841003 Msa0011160:CDS
TCACGGCGGAATCGATCGTC+GGG 0.499642 1_1:-16838370 None:intergenic
CTTTGTCTTCGACTTTGGAA+AGG 0.500167 1_1:-16841866 None:intergenic
CTGGAAATGACAGGGACTCT+GGG 0.500456 1_1:+16844967 Msa0011160:CDS
GTTCACGACGGCGATTGGAT+TGG 0.500571 1_1:-16838121 None:intergenic
GTGTAACTTTGGAATGAGCT+TGG 0.500692 1_1:-16841750 None:intergenic
CCTGTCGTTGTACACAATAT+AGG 0.501338 1_1:+16848138 Msa0011160:three_prime_UTR
CTCTATCAGCATCATTTGAA+TGG 0.501532 1_1:-16840655 None:intergenic
GCCTAATAGTTCGGGCGTGT+TGG 0.501610 1_1:+16839512 Msa0011160:CDS
TTACCTGCTCTAACTCGGGC+AGG 0.502716 1_1:+16848248 Msa0011160:three_prime_UTR
TAAGTACCCGACTGCAGATA+AGG 0.503562 1_1:-16845087 None:intergenic
TGTGTCACACTAACCAAGTC+AGG 0.504167 1_1:-16839894 None:intergenic
TCATGTTCCTCACTCTGTTG+AGG 0.504360 1_1:-16847817 None:intergenic
CTCACTATCCAACCAGGTTG+GGG 0.504411 1_1:+16840751 Msa0011160:CDS
TCTTCTTGTAATAGCTATCA+GGG 0.504762 1_1:-16842635 None:intergenic
CTGATGCAGGGTTCTGATGT+TGG 0.504839 1_1:+16840383 Msa0011160:CDS
AGGTTTCACCAGTTCCTAAG+AGG 0.504929 1_1:+16840852 Msa0011160:CDS
GCCTCATTAGTGTGGACACT+TGG 0.505437 1_1:+16844930 Msa0011160:CDS
CTCTGAAGTGTCCGCCTGGA+AGG 0.505460 1_1:-16845739 None:intergenic
TACTCGTAAATTGGCATCCA+AGG 0.506737 1_1:+16839275 Msa0011160:CDS
TTGACTCTAGGTAGAGAAGC+TGG 0.506829 1_1:-16841955 None:intergenic
TACACAGGTCTGATCTGGTC+TGG 0.507406 1_1:-16837918 None:intergenic
CCTGCTGAAAGTTTGACTCT+AGG 0.507594 1_1:-16841967 None:intergenic
CGTAGACTCAGATGATCCTC+TGG 0.510004 1_1:-16841101 None:intergenic
TGATTATCGTGATTCTGAAA+CGG 0.511183 1_1:+16838735 Msa0011160:CDS
CAGAGGATCATCTGAGTCTA+CGG 0.511983 1_1:+16841102 Msa0011160:CDS
AATACTTCTTACATTCGTAA+AGG 0.512223 1_1:+16842036 Msa0011160:CDS
CCGTTGAAATTTCTGAACCT+GGG 0.513315 1_1:+16847773 Msa0011160:CDS
CTGAATCAAACCCTAACCCT+AGG 0.513921 1_1:+16838467 Msa0011160:CDS
CGGAGAGGTGGATAGGAAGG+AGG 0.513950 1_1:-16838436 None:intergenic
ATAGTAATCTTGTAGATGTA+GGG 0.515253 1_1:+16840051 Msa0011160:CDS
AACTGCTCCATCTAGCAATC+GGG 0.515581 1_1:+16842464 Msa0011160:CDS
AGAGGTGGATAGGAAGGAGG+AGG 0.517092 1_1:-16838433 None:intergenic
AGAGGCTTATTGTGAAAAGA+TGG 0.517247 1_1:+16840217 Msa0011160:CDS
CCTTCGGTTGCCAATGCAGT+TGG 0.517501 1_1:+16839540 Msa0011160:CDS
TCAACTTCCGGTGTTGATGT+GGG 0.517650 1_1:+16839111 Msa0011160:CDS
CGCCTAAACCCAAAGATGGT+GGG 0.518388 1_1:-16842170 None:intergenic
GTGACTCCAATACCATCGGC+AGG 0.518806 1_1:-16841430 None:intergenic
GCTGAAAAGCTGGTGTCCCC+TGG 0.518916 1_1:+16840461 Msa0011160:CDS
TTATCGGATATGTATTCTCA+AGG 0.520840 1_1:+16841499 Msa0011160:CDS
GAAGTACTTTACTATCCCCT+TGG 0.521811 1_1:-16842743 None:intergenic
GTTGTTCCTTATCTGCAGTC+GGG 0.522337 1_1:+16845081 Msa0011160:CDS
GAACGATAAAGGAGAGGCTG+AGG 0.523025 1_1:-16838241 None:intergenic
AAATACGAGTGTACTGATGC+AGG 0.523152 1_1:+16840370 Msa0011160:CDS
TTGCAACTGTCTGGTTGACA+TGG 0.523357 1_1:-16842692 None:intergenic
AATTGGCATTGTCGGTGTAA+AGG 0.523528 1_1:-16838498 None:intergenic
TGGTTCAGTTCGATACAGAA+TGG 0.524893 1_1:+16845714 Msa0011160:CDS
TTAAGGGATATTGTGCTGAT+GGG 0.525592 1_1:+16847167 Msa0011160:CDS
ATTGGGGATTGAGTTTGAGT+GGG 0.526580 1_1:-16837958 None:intergenic
AGACTTGAAGAGGAGATTTG+AGG 0.527443 1_1:-16842099 None:intergenic
TTCACTTGGATTCGATGTAA+GGG 0.529432 1_1:+16840544 Msa0011160:CDS
GTGGTGGTAATTGGCATTGT+CGG 0.529733 1_1:-16838506 None:intergenic
GATGCTTCACAAAAGAATGT+AGG 0.530027 1_1:+16839189 Msa0011160:CDS
GTCCAGAAGCCTGCAAACTT+AGG 0.530038 1_1:+16848014 Msa0011160:CDS
GATGATGATGAAAACATTTG+CGG 0.530078 1_1:+16841571 Msa0011160:CDS
GCACACTGCCAGACAGCGGT+TGG 0.530194 1_1:+16846698 Msa0011160:CDS
TGTCAAGATGAAGCAAATGT+TGG 0.531041 1_1:+16842489 Msa0011160:CDS
TTGTAGGATCACTGGAATTG+AGG 0.531582 1_1:-16840148 None:intergenic
GTTCAATCGGTGTTCTACTT+CGG 0.532026 1_1:+16840247 Msa0011160:CDS
CCTATATTGTGTACAACGAC+AGG 0.532041 1_1:-16848138 None:intergenic
AAAATTACCTGCTCTAACTC+GGG 0.532126 1_1:+16848244 Msa0011160:three_prime_UTR
GGAAAGGAAACTACTAACAG+TGG 0.532146 1_1:+16840176 Msa0011160:CDS
AGTTGTTCCTTATCTGCAGT+CGG 0.532599 1_1:+16845080 Msa0011160:CDS
CCTAGAGTCAAACTTTCAGC+AGG 0.533028 1_1:+16841967 Msa0011160:CDS
TGGCTAATTGACCGTGGTGG+TGG 0.535829 1_1:-16838522 None:intergenic
GGAGATCAGAACAACGGTAG+AGG 0.536667 1_1:+16847730 Msa0011160:CDS
ACCATTCCACTGCTTGGCAG+GGG 0.536796 1_1:-16840293 None:intergenic
AGCTGTGTCCCCAACCTGGT+TGG 0.537523 1_1:-16840759 None:intergenic
AATACTTTGGGGAAGAATGT+AGG 0.538294 1_1:+16839351 Msa0011160:CDS
CCTGGGAAACATTTAGATGT+AGG 0.539004 1_1:+16840017 Msa0011160:CDS
GTGTAAAGGAAGGTTTCCCT+AGG 0.539223 1_1:-16838484 None:intergenic
GGCATTGTCGGTGTAAAGGA+AGG 0.539601 1_1:-16838494 None:intergenic
TACCGATTGAGGCAGAGGAT+AGG 0.539737 1_1:-16846316 None:intergenic
ACTTTGGAATGAGCTTGGGC+TGG 0.540055 1_1:-16841745 None:intergenic
TTTGGGAAATGTAACAAGGA+TGG 0.540343 1_1:+16846756 Msa0011160:CDS
AAATCAACCAGTTAGATTGT+GGG 0.540853 1_1:+16839958 Msa0011160:CDS
GAACAATCAGGCATTCTCTC+CGG 0.541323 1_1:-16846982 None:intergenic
TATAGTATTGGTAGTAATAG+CGG 0.541515 1_1:+16838763 Msa0011160:CDS
AAGGCATTGATTGAAGAGGC+AGG 0.541733 1_1:-16841892 None:intergenic
AATTTCTGAACCTGGGATGA+TGG 0.542172 1_1:+16847780 Msa0011160:CDS
CATTCCAAAGTTACACCTCT+GGG 0.542607 1_1:+16841757 Msa0011160:CDS
AAAGCAACCATTCCACTGCT+TGG 0.543531 1_1:-16840299 None:intergenic
GGATACGGCGGTGTTCGAGG+GGG 0.543618 1_1:-16838315 None:intergenic
AACCAAACTTGTACCGATTG+AGG 0.544384 1_1:-16846327 None:intergenic
TTTACGAGTATGAGTACCAC+TGG 0.544630 1_1:-16839262 None:intergenic
GCACTCAAAGAAAGCTAATG+AGG 0.545394 1_1:+16845338 Msa0011160:CDS
AATCCTCTGAAGTGTCCGCC+TGG 0.545967 1_1:-16845743 None:intergenic
AATATCAACATCCACTTCAA+CGG 0.546199 1_1:-16839037 None:intergenic
ACATCAACACCGGAAGTTGA+AGG 0.548217 1_1:-16839108 None:intergenic
TACATATCCGATAAAGCGTA+AGG 0.548928 1_1:-16841490 None:intergenic
AGAAAACCCACGGGTCGACC+TGG 0.549601 1_1:-16845250 None:intergenic
TGATAACGTGGATCTTCAGT+TGG 0.550325 1_1:+16847930 Msa0011160:CDS
GGGGCCAGAATGCAGGTCAC+AGG 0.550740 1_1:+16839728 Msa0011160:CDS
AGTACATCTTCAGAGCAGGC+TGG 0.550908 1_1:-16842414 None:intergenic
TCGCCTAAACCCAAAGATGG+TGG 0.554097 1_1:-16842171 None:intergenic
TAGTGAATTCTGACGGCCAA+GGG 0.555529 1_1:+16842727 Msa0011160:CDS
ATTAGGGTTAGGGTTCCAGG+CGG 0.556014 1_1:-16838347 None:intergenic
AAGGATCCATGTTCTTCAGA+AGG 0.556582 1_1:+16840695 Msa0011160:CDS
GGGAAATGTAACAAGGATGG+AGG 0.556998 1_1:+16846759 Msa0011160:CDS
CATGAAGGATGCTGAAAAGC+TGG 0.557408 1_1:+16840451 Msa0011160:CDS
TACTGACGACAAAGGCCAAA+CGG 0.557613 1_1:+16842608 Msa0011160:CDS
GGTAGTAATAGCGGTAGTAG+AGG 0.557668 1_1:+16838772 Msa0011160:CDS
CGATAAAGGAGAGGCTGAGG+AGG 0.557763 1_1:-16838238 None:intergenic
GAATCCAGGTTTGAAAGAGG+TGG 0.558548 1_1:+16839786 Msa0011160:CDS
CTTGTGTCCTGCCCTGCCGA+TGG 0.558737 1_1:+16841418 Msa0011160:CDS
AACTGCAGCAACAGCAAGTG+TGG 0.559009 1_1:-16845460 None:intergenic
AACGTAACTGTTCAACATCT+CGG 0.559016 1_1:-16838918 None:intergenic
ATTGCTTCTGTTGAGAAAGA+GGG 0.559482 1_1:+16845215 Msa0011160:CDS
TTTGAGGACCAACACAAGCT+GGG 0.559552 1_1:-16845509 None:intergenic
TGATTGAAATTGAATTATTG+GGG 0.560689 1_1:-16837974 None:intergenic
AAAAGGGAGTCCCGTTGAAG+TGG 0.561274 1_1:+16839026 Msa0011160:CDS
CCTAAGGCATCTATTTGTGA+AGG 0.561509 1_1:+16847139 Msa0011160:CDS
TTGAGGAGATTGATGAAAAG+GGG 0.561818 1_1:-16838281 None:intergenic
TCACCAATTTGGTATCATGA+AGG 0.562356 1_1:+16840436 Msa0011160:CDS
TTAGGGTTAGGGTTCCAGGC+GGG 0.564484 1_1:-16838346 None:intergenic
GGTTTGATTCAGATTCGTAT+CGG 0.564784 1_1:-16838456 None:intergenic
GCTTTAGGGATGACACCGCC+TGG 0.564866 1_1:-16841823 None:intergenic
GGTATGGCAGCAACTGGAGT+AGG 0.565295 1_1:-16842078 None:intergenic
TTAGATAGCATATCAGCCCT+TGG 0.566502 1_1:-16841355 None:intergenic
GTAAAGTACTTCGCAATAGG+AGG 0.567441 1_1:+16842754 Msa0011160:CDS
TCGGAGGAGCGTATCTTGTA+CGG 0.567592 1_1:-16838180 None:intergenic
AAACCTGCCCGAGTTAGAGC+AGG 0.567687 1_1:-16848251 None:intergenic
CTAAGGCATCTATTTGTGAA+GGG 0.567857 1_1:+16847140 Msa0011160:CDS
TTTCGAGTTTAGGAGACACT+AGG 0.568069 1_1:+16840321 Msa0011160:CDS
TGAATTTAGTGATTCAGTTG+CGG 0.568222 1_1:+16840919 Msa0011160:CDS
CAAAACGGGAACTTGTTTGG+AGG 0.568508 1_1:+16839611 Msa0011160:CDS
ATGTTGATGCCTCAAATGAT+TGG 0.568553 1_1:-16847897 None:intergenic
TAAAATCTCGAACTTGGCAT+CGG 0.568795 1_1:+16841914 Msa0011160:CDS
AACAGAACCCACATCAACAC+CGG 0.570812 1_1:-16839118 None:intergenic
GGAGAACGTATATTTCGGGT+TGG 0.571358 1_1:+16845694 Msa0011160:intron
CATCGGCAGGGCAGGACACA+AGG 0.573086 1_1:-16841417 None:intergenic
ACCAAGTGTCCACACTAATG+AGG 0.573130 1_1:-16844931 None:intergenic
TCTAATGGTAATTTCTTCAG+GGG 0.573758 1_1:+16838952 Msa0011160:CDS
GCATTTGGAATTGGAGCACT+CGG 0.574223 1_1:+16841153 Msa0011160:CDS
ACTGCATTGGCAACCGAAGG+TGG 0.574966 1_1:-16839537 None:intergenic
GGTACATGAAAGGTGAAGAG+AGG 0.576245 1_1:+16839001 Msa0011160:CDS
TGTCTGCGCCAGACGATCAA+GGG 0.578110 1_1:+16839658 Msa0011160:CDS
CCCAGGTTCAGAAATTTCAA+CGG 0.578777 1_1:-16847773 None:intergenic
ATCGCCGTCGTGAACCGTCA+TGG 0.579107 1_1:+16838129 Msa0011160:exon
ATGTTGTGCAAAGGTCTCCA+AGG 0.579466 1_1:+16841338 Msa0011160:CDS
AGGATGATTCGATGTGGAAG+CGG 0.581721 1_1:-16838548 None:intergenic
GGTTGTCCATGCCGAATTTG+GGG 0.584085 1_1:+16839709 Msa0011160:CDS
GAAACGGGTAGGTATAGTAT+TGG 0.585108 1_1:+16838751 Msa0011160:CDS
GAGATCAGAACAACGGTAGA+GGG 0.585190 1_1:+16847731 Msa0011160:CDS
GGAGGAAGGTGGTGAATCGG+AGG 0.585449 1_1:-16838196 None:intergenic
GTAGTAATAGCGGTAGTAGA+GGG 0.586104 1_1:+16838773 Msa0011160:CDS
ACCTTAGAGGCCAATTTACG+AGG 0.587045 1_1:-16839438 None:intergenic
CCTACATCTAAATGTTTCCC+AGG 0.588019 1_1:-16840017 None:intergenic
ATCACGGCGGAATCGATCGT+CGG 0.588120 1_1:-16838371 None:intergenic
TGATCCTACAAGTTCAGGAA+AGG 0.588800 1_1:+16840160 Msa0011160:CDS
GGAAAGATCAACATGGAAGA+GGG 0.588921 1_1:+16838980 Msa0011160:CDS
TTCTGGCCCCAAATTCGGCA+TGG 0.589250 1_1:-16839715 None:intergenic
TTGGGGAAGAATGTAGGTGA+TGG 0.589264 1_1:+16839357 Msa0011160:CDS
CTGGAAGGAGGTTCTAGCAA+CGG 0.589939 1_1:-16842336 None:intergenic
GGACTCTGGGCATTATCAGA+AGG 0.590395 1_1:+16844980 Msa0011160:CDS
TGAGGAGATTGATGAAAAGG+GGG 0.590475 1_1:-16838280 None:intergenic
GTCATCCCTAAAGCTTTCAA+GGG 0.590686 1_1:+16841832 Msa0011160:CDS
CCAGCAGAATTGATAACAGA+AGG 0.590861 1_1:+16838623 Msa0011160:CDS
AGGCAAGTGGAAGAGACTAA+AGG 0.591467 1_1:+16848034 Msa0011160:exon
GTTTCGCCTAAACCCAAAGA+TGG 0.592203 1_1:-16842174 None:intergenic
GACGTTGCATCGTCAAGCAT+GGG 0.592269 1_1:+16841004 Msa0011160:CDS
GTAGTGAATTCTGACGGCCA+AGG 0.592493 1_1:+16842726 Msa0011160:CDS
TCAGATTCGTATCGGAGAGG+TGG 0.593500 1_1:-16838448 None:intergenic
TGAGCATACAAGTAATATCA+CGG 0.593553 1_1:+16841267 Msa0011160:CDS
TTCGTATCGGAGAGGTGGAT+AGG 0.593909 1_1:-16838443 None:intergenic
AGCCTGCAAACTTAGGCAAG+TGG 0.594678 1_1:+16848021 Msa0011160:exon
TTAACTTCTGTTGAAGCCAG+TGG 0.595037 1_1:+16839246 Msa0011160:CDS
TTGGTGGGTCTAGTTTAAAG+TGG 0.595638 1_1:+16845298 Msa0011160:CDS
TACGGTGGTCTTGATGGTGG+AGG 0.596746 1_1:-16838162 None:intergenic
TATCGGAGAGGTGGATAGGA+AGG 0.597569 1_1:-16838439 None:intergenic
GGTATAGCAGAAACTGGAGT+AGG 0.598131 1_1:-16842132 None:intergenic
AGAAAACTGAACATTTGGAA+TGG 0.599123 1_1:-16841206 None:intergenic
GCAACGGGAACCTGTACTCA+AGG 0.599202 1_1:+16847646 Msa0011160:CDS
CAGTCTTGATGTGTATGAAG+CGG 0.599633 1_1:+16847861 Msa0011160:CDS
CTTGGAGCGACCATCATCCC+AGG 0.599643 1_1:-16847790 None:intergenic
CTTCAAGAGCCTCATTAGTG+TGG 0.599998 1_1:+16844922 Msa0011160:CDS
CTTCCAGGCGGACACTTCAG+AGG 0.600445 1_1:+16845740 Msa0011160:CDS
GAGTTTAATCATCATAATCA+GGG 0.601163 1_1:+16838805 Msa0011160:CDS
AGACGATCAAGGGAATGCAT+TGG 0.602832 1_1:+16839668 Msa0011160:CDS
GTGAAGTATCTCTATCGCCT+GGG 0.603639 1_1:+16840000 Msa0011160:CDS
TCTAAGCCTTCTGAAGAACA+TGG 0.605007 1_1:-16840701 None:intergenic
CATGGAAGAGGGTACATGAA+AGG 0.605135 1_1:+16838991 Msa0011160:CDS
AGAGGAGATGTTCTCTGCAG+AGG 0.608120 1_1:-16842276 None:intergenic
AAACTGTGGTAGCAGATAGT+GGG 0.609580 1_1:+16839565 Msa0011160:CDS
ACATGTCAATGTGAACCCTA+AGG 0.610155 1_1:+16847123 Msa0011160:CDS
TTGTACGGTGGTCTTGATGG+TGG 0.610197 1_1:-16838165 None:intergenic
AGATATGTTCGAATTGGCAA+CGG 0.610724 1_1:+16846606 Msa0011160:intron
TGAATCAAACCCTAACCCTA+GGG 0.611278 1_1:+16838468 Msa0011160:CDS
AAGAAAGACCCAGCTTGTGT+TGG 0.613201 1_1:+16845501 Msa0011160:CDS
GAGCATACAAGTAATATCAC+GGG 0.613272 1_1:+16841268 Msa0011160:CDS
CACAATTCTCAGCAGATATG+GGG 0.614526 1_1:-16840490 None:intergenic
TTGCTAGAACCTCCTTCCAG+TGG 0.614686 1_1:+16842339 Msa0011160:CDS
AAAGAATCCAGGTTTGAAAG+AGG 0.616735 1_1:+16839783 Msa0011160:CDS
GAAAGGAAACTACTAACAGT+GGG 0.618308 1_1:+16840177 Msa0011160:CDS
CCATTCCACTGCTTGGCAGG+GGG 0.620676 1_1:-16840292 None:intergenic
GTAAAGCTGTGTCCCCAACC+TGG 0.620740 1_1:-16840763 None:intergenic
TCACAGAAGCCACTGGAAGG+AGG 0.622319 1_1:-16842348 None:intergenic
GGTGATGGTTGTAATTCGCA+TGG 0.622891 1_1:+16839372 Msa0011160:CDS
TCTCCTCACGAGACTTGAAG+AGG 0.623402 1_1:-16842109 None:intergenic
AATACGAGTGTACTGATGCA+GGG 0.623427 1_1:+16840371 Msa0011160:CDS
TAAACCCAAAGATGGTGGGT+TGG 0.623445 1_1:-16842166 None:intergenic
TCTAATGATCTCGATAAGAA+GGG 0.629871 1_1:+16841373 Msa0011160:CDS
TTTCTGTGTTTGGCTGTGAG+CGG 0.631324 1_1:+16841224 Msa0011160:CDS
TATCGGATATGTATTCTCAA+GGG 0.631607 1_1:+16841500 Msa0011160:CDS
GAATAATGACATTGATGGAG+AGG 0.631647 1_1:+16840199 Msa0011160:CDS
ATTATAGAGATGTTGTGCAA+AGG 0.631846 1_1:+16841329 Msa0011160:CDS
ATTTCCAAAGAGAAAACCCA+CGG 0.634860 1_1:-16845260 None:intergenic
GGAGTTTCTGGTGAAGCTAG+CGG 0.635385 1_1:+16839408 Msa0011160:CDS
GTGATGGTTGTAATTCGCAT+GGG 0.635662 1_1:+16839373 Msa0011160:CDS
AGGAACTTCTGCATTAGATG+TGG 0.636758 1_1:-16840945 None:intergenic
GGAAATGTAACAAGGATGGA+GGG 0.638135 1_1:+16846760 Msa0011160:CDS
CTTGTAATAGCTATCAGGGA+TGG 0.638157 1_1:-16842631 None:intergenic
ATATTGTGCTGATGGGAATG+AGG 0.638195 1_1:+16847174 Msa0011160:CDS
GGTTTAGGCGAAACACCTAA+GGG 0.639894 1_1:+16842183 Msa0011160:CDS
GAGGAAGTGTTGATCCATGA+CGG 0.641416 1_1:-16838143 None:intergenic
ACAATACTAGAAACACAAGA+TGG 0.641712 1_1:-16839825 None:intergenic
AGCGTATCTATGGTCAAACA+TGG 0.643872 1_1:+16841613 Msa0011160:CDS
GAGACCCAAAGAAACGAACT+CGG 0.645153 1_1:+16846643 Msa0011160:CDS
GGGAGAAAAGATAGATTCAG+AGG 0.645167 1_1:+16841288 Msa0011160:CDS
TGTTGTGCAAAGGTCTCCAA+GGG 0.645815 1_1:+16841339 Msa0011160:CDS
GAGGAGCGTATCTTGTACGG+TGG 0.648862 1_1:-16838177 None:intergenic
TCTCCTCTTCAAGTCTCGTG+AGG 0.648937 1_1:+16842106 Msa0011160:CDS
CCAACTGCATTGGCAACCGA+AGG 0.649969 1_1:-16839540 None:intergenic
AATTCAAAAGGTGAATGAGA+CGG 0.650676 1_1:-16838679 None:intergenic
ACATATTGACACCAAATCAG+AGG 0.651404 1_1:+16842299 Msa0011160:CDS
AAGACATCCTCAACAGAGTG+AGG 0.651701 1_1:+16847810 Msa0011160:CDS
ATTGTCTCTACTGACGACAA+AGG 0.651836 1_1:+16842600 Msa0011160:CDS
CAGATATGGGGACTTCACCA+GGG 0.652067 1_1:-16840478 None:intergenic
TGTAAAGGAAGGTTTCCCTA+GGG 0.652214 1_1:-16838483 None:intergenic
GATAGTGACTCCAATACCAT+CGG 0.652461 1_1:-16841434 None:intergenic
TGACTCCAATACCATCGGCA+GGG 0.656889 1_1:-16841429 None:intergenic
CACATCAAGACTGATGTAGT+CGG 0.657143 1_1:-16847851 None:intergenic
GATTTGGTGTCAATATGTAG+AGG 0.657433 1_1:-16842294 None:intergenic
TTGGGGACACAGCTTTACAT+GGG 0.657896 1_1:+16840768 Msa0011160:CDS
TCTGGCGGAATCAATTCTGG+TGG 0.661490 1_1:-16838593 None:intergenic
ACCGGAAGTTGAAGGCGCTG+CGG 0.662384 1_1:-16839100 None:intergenic
TCATTTGAATGGCTAACTGG+AGG 0.664122 1_1:-16840644 None:intergenic
GATTCAGATTCGTATCGGAG+AGG 0.664746 1_1:-16838451 None:intergenic
TATACACCAGGTCGACCCGT+GGG 0.666960 1_1:+16845244 Msa0011160:CDS
GCAGAATTGATAACAGAAGG+TGG 0.668114 1_1:+16838626 Msa0011160:CDS
GATTTGGTATTTCAAGAACA+GGG 0.668355 1_1:+16847286 Msa0011160:CDS
AAATTCTTCTGGAAATGACA+GGG 0.670414 1_1:+16844959 Msa0011160:CDS
TATGGTCTCTACACAATGTG+AGG 0.671177 1_1:+16841177 Msa0011160:CDS
GGAGACACTAGGATTCAGGA+TGG 0.671573 1_1:+16840332 Msa0011160:CDS
TCTGCTGGAATCGATTCTGG+CGG 0.671754 1_1:-16838608 None:intergenic
ATGCTAATAAGAATACTTTG+GGG 0.673437 1_1:+16839340 Msa0011160:CDS
ATCGTGATTCTGAAACGGGT+AGG 0.674321 1_1:+16838740 Msa0011160:CDS
AAGAAGAAAGCTGTTTCTGG+TGG 0.674414 1_1:+16839306 Msa0011160:CDS
AGAGAAGAACGATAAAGGAG+AGG 0.676659 1_1:-16838247 None:intergenic
TGGATAAGGATGATTCGATG+TGG 0.679371 1_1:-16838554 None:intergenic
AATAACGTAGTGAATTCTGA+CGG 0.679888 1_1:+16842720 Msa0011160:CDS
TGATGATGAAAACATTTGCG+GGG 0.681275 1_1:+16841573 Msa0011160:CDS
GTATACACCAGGTCGACCCG+TGG 0.682218 1_1:+16845243 Msa0011160:CDS
AAGATTTGGGAAATGTAACA+AGG 0.682665 1_1:+16846752 Msa0011160:CDS
GGCTTGGGACAACAGTACAC+AGG 0.682730 1_1:-16837933 None:intergenic
GCTTGCACACTGCCAGACAG+CGG 0.682822 1_1:+16846694 Msa0011160:CDS
GATGTAGTGACCCAGTACCA+AGG 0.684679 1_1:+16841707 Msa0011160:CDS
GTAGAACACCGATTGAACAC+AGG 0.685496 1_1:-16840242 None:intergenic
CATCCTTATCCAGAACGTGA+CGG 0.689771 1_1:+16838565 Msa0011160:CDS
AGTGAATTCTGACGGCCAAG+GGG 0.694773 1_1:+16842728 Msa0011160:CDS
TTTCCAAAGAGAAAACCCAC+GGG 0.696448 1_1:-16845259 None:intergenic
TAGTGTGACACATATTGACA+AGG 0.698981 1_1:+16839905 Msa0011160:CDS
CAAGATGAATTTAGACCCAG+AGG 0.699082 1_1:-16841772 None:intergenic
GGTGGTGGTGATGAGAATCA+CGG 0.699794 1_1:-16838387 None:intergenic
AGATCAGGAGATCAGAACAA+CGG 0.707242 1_1:+16847724 Msa0011160:CDS
AGAGGGATACTGTATACACC+AGG 0.710842 1_1:+16845232 Msa0011160:CDS
TCACAGGAATATAAGAACGA+CGG 0.715354 1_1:+16839744 Msa0011160:CDS
AGATATGGGGACTTCACCAG+GGG 0.718150 1_1:-16840477 None:intergenic
ACTCTAGGTAGAGAAGCTGG+AGG 0.719576 1_1:-16841952 None:intergenic
CAATGCAGTTGGTGAAACTG+TGG 0.724212 1_1:+16839551 Msa0011160:CDS
CGGTTGTGGCTAATTGACCG+TGG 0.724465 1_1:-16838528 None:intergenic
GATGATGAAAACATTTGCGG+GGG 0.724984 1_1:+16841574 Msa0011160:CDS
TTAGGGATGACACCGCCTGG+CGG 0.732927 1_1:-16841820 None:intergenic
AATGCCAATTACCACCACCA+CGG 0.735257 1_1:+16838511 Msa0011160:CDS
GGTAATGGGAAAGATCAACA+TGG 0.736649 1_1:+16838973 Msa0011160:CDS
TGATCCATGACGGTTCACGA+CGG 0.748033 1_1:-16838133 None:intergenic
TTGTGGCTAATTGACCGTGG+TGG 0.766049 1_1:-16838525 None:intergenic
GGAAGGAGGTTCTAGCAACG+GGG 0.767020 1_1:-16842334 None:intergenic
ACAGAATGGATCCTTCCAGG+CGG 0.770674 1_1:+16845728 Msa0011160:CDS
GGTGGTGATGAGAATCACGG+CGG 0.860305 1_1:-16838384 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAGAAAATATAAAAAA+AGG - chr1_1:16843627-16843646 None:intergenic 10.0%
!! AATTGTTAATAATTTACAAA+AGG - chr1_1:16845407-16845426 None:intergenic 10.0%
!! TAATAATAACAAAAAAGAAA+AGG - chr1_1:16845592-16845611 None:intergenic 10.0%
!! TAAATTACATAAAAAACAAA+GGG - chr1_1:16848178-16848197 None:intergenic 10.0%
!! ATGATTGAAATTGAATTATT+GGG - chr1_1:16837978-16837997 None:intergenic 15.0%
!! TATGATTGAAATTGAATTAT+TGG - chr1_1:16837979-16837998 None:intergenic 15.0%
!!! ATATATTTTGTTGAATAATG+TGG + chr1_1:16842942-16842961 Msa0011160:intron 15.0%
!!! CTTTATTTAGACAATAATTA+TGG - chr1_1:16844024-16844043 None:intergenic 15.0%
!!! TAATTTCTCATTATCATTTT+AGG + chr1_1:16845434-16845453 Msa0011160:intron 15.0%
!! AAATAAATTAATGACCATAA+AGG - chr1_1:16846150-16846169 None:intergenic 15.0%
!! ACAATATAAAAACAGAAAAA+GGG - chr1_1:16846181-16846200 None:intergenic 15.0%
!! AACAATATAAAAACAGAAAA+AGG - chr1_1:16846182-16846201 None:intergenic 15.0%
!!! TAAGGTTTTGTATATATATA+TGG + chr1_1:16846875-16846894 Msa0011160:intron 15.0%
!!! AAGGTTTTGTATATATATAT+GGG + chr1_1:16846876-16846895 Msa0011160:intron 15.0%
!!! TTATTCTGACAAAATTTTTT+TGG + chr1_1:16847066-16847085 Msa0011160:intron 15.0%
!!! AGTTTTAAAATAGGTAATTA+AGG + chr1_1:16848058-16848077 Msa0011160:three_prime_UTR 15.0%
!! AAATTACATAAAAAACAAAG+GGG - chr1_1:16848177-16848196 None:intergenic 15.0%
!! GTAAATTACATAAAAAACAA+AGG - chr1_1:16848179-16848198 None:intergenic 15.0%
!! TGATTGAAATTGAATTATTG+GGG - chr1_1:16837977-16837996 None:intergenic 20.0%
!! AAACAAACAAAACCAAAATT+AGG + chr1_1:16838034-16838053 Msa0011160:five_prime_UTR 20.0%
!! AATGCTAATAAGAATACTTT+GGG + chr1_1:16839339-16839358 Msa0011160:CDS 20.0%
!! GATTGAAATTCAGTTAAATT+TGG - chr1_1:16840899-16840918 None:intergenic 20.0%
!! TTCAAATAATGAATTGATTG+AGG + chr1_1:16841462-16841481 Msa0011160:CDS 20.0%
!!! TCATCTTGTTTTGAATTAAA+TGG + chr1_1:16841787-16841806 Msa0011160:CDS 20.0%
!! ATTCAACAAAATATATCTAC+TGG - chr1_1:16842938-16842957 None:intergenic 20.0%
!! TTTGTTTAATTAAGACTAGA+CGG + chr1_1:16843129-16843148 Msa0011160:intron 20.0%
!! TATAAGAGAAACTATTAAGA+AGG + chr1_1:16843335-16843354 Msa0011160:intron 20.0%
!! TTATATTAAAAACCAATGAG+AGG - chr1_1:16843540-16843559 None:intergenic 20.0%
!! TAACCCTAAATTATATATCT+CGG - chr1_1:16843768-16843787 None:intergenic 20.0%
!! ACATAGACATCATAAATTAT+GGG - chr1_1:16843964-16843983 None:intergenic 20.0%
!! TACATAGACATCATAAATTA+TGG - chr1_1:16843965-16843984 None:intergenic 20.0%
!!! AATTATGGATGTTTAAAACT+GGG - chr1_1:16844009-16844028 None:intergenic 20.0%
!!! TAATTATGGATGTTTAAAAC+TGG - chr1_1:16844010-16844029 None:intergenic 20.0%
!!! TTTTTTGAAGAAACTAAACT+AGG + chr1_1:16844354-16844373 Msa0011160:intron 20.0%
!! TTACTACAAATTTCAATGAT+TGG + chr1_1:16844465-16844484 Msa0011160:intron 20.0%
!!! TTTGATTCAATGTTTTTTCA+AGG + chr1_1:16846045-16846064 Msa0011160:intron 20.0%
!!! TTGATTCAATGTTTTTTCAA+GGG + chr1_1:16846046-16846065 Msa0011160:intron 20.0%
!!! AGTTTGATATCTTTTATGAT+TGG + chr1_1:16846422-16846441 Msa0011160:intron 20.0%
!!! GTTTGATATCTTTTATGATT+GGG + chr1_1:16846423-16846442 Msa0011160:intron 20.0%
!!! AGGTTTTGTATATATATATG+GGG + chr1_1:16846877-16846896 Msa0011160:intron 20.0%
!!! ATTATTTCTTGTTGAATTAC+CGG + chr1_1:16847212-16847231 Msa0011160:intron 20.0%
!!! ACAAAATTTTCAGAAAAATG+GGG - chr1_1:16848099-16848118 None:intergenic 20.0%
!!! CACAAAATTTTCAGAAAAAT+GGG - chr1_1:16848100-16848119 None:intergenic 20.0%
!! GAAATTACGTAACCTAATTT+TGG - chr1_1:16838049-16838068 None:intergenic 25.0%
!!! TATAGTATTGGTAGTAATAG+CGG + chr1_1:16838763-16838782 Msa0011160:CDS 25.0%
! AGAGTTTAATCATCATAATC+AGG + chr1_1:16838804-16838823 Msa0011160:CDS 25.0%
! GAGTTTAATCATCATAATCA+GGG + chr1_1:16838805-16838824 Msa0011160:CDS 25.0%
!!! TTCTTTTGAATCTGTTTCTT+CGG - chr1_1:16838853-16838872 None:intergenic 25.0%
! AGAATATGAAACCTAATCAT+AGG + chr1_1:16838893-16838912 Msa0011160:CDS 25.0%
! CGTTATGTTAATGATTCTAA+TGG + chr1_1:16838937-16838956 Msa0011160:CDS 25.0%
! ATTCTAATGGTAATTTCTTC+AGG + chr1_1:16838950-16838969 Msa0011160:CDS 25.0%
! TTCTAATGGTAATTTCTTCA+GGG + chr1_1:16838951-16838970 Msa0011160:CDS 25.0%
! TAATCCTAATGAGAAAAAAG+AGG + chr1_1:16839221-16839240 Msa0011160:CDS 25.0%
! AATCCTAATGAGAAAAAAGA+GGG + chr1_1:16839222-16839241 Msa0011160:CDS 25.0%
! GAATGCTAATAAGAATACTT+TGG + chr1_1:16839338-16839357 Msa0011160:CDS 25.0%
! ATGCTAATAAGAATACTTTG+GGG + chr1_1:16839340-16839359 Msa0011160:CDS 25.0%
! AGTATTGTAGATAGAATTAG+TGG + chr1_1:16839840-16839859 Msa0011160:CDS 25.0%
! AAGGCTACTAAGTTATTAAA+TGG + chr1_1:16839924-16839943 Msa0011160:CDS 25.0%
! AATAGTAATCTTGTAGATGT+AGG + chr1_1:16840050-16840069 Msa0011160:CDS 25.0%
! ATAGTAATCTTGTAGATGTA+GGG + chr1_1:16840051-16840070 Msa0011160:CDS 25.0%
! CCAAGTGAAATATTAGAATT+TGG - chr1_1:16840533-16840552 None:intergenic 25.0%
! CCAAATTCTAATATTTCACT+TGG + chr1_1:16840530-16840549 Msa0011160:CDS 25.0%
!! AAATGGTTTGACTTTGAATT+TGG + chr1_1:16840607-16840626 Msa0011160:CDS 25.0%
! ATATTACTTGTATGCTCAAT+TGG - chr1_1:16841265-16841284 None:intergenic 25.0%
! AACATCTCTATAATGGTAAT+TGG - chr1_1:16841323-16841342 None:intergenic 25.0%
! AACAGCATACTGAAAAAATT+AGG + chr1_1:16841665-16841684 Msa0011160:CDS 25.0%
!!! TTACGAATGTAAGAAGTATT+TGG - chr1_1:16842036-16842055 None:intergenic 25.0%
! AATACTTCTTACATTCGTAA+AGG + chr1_1:16842036-16842055 Msa0011160:CDS 25.0%
!!! ACATATGTTTTGGAATAGAT+TGG - chr1_1:16842246-16842265 None:intergenic 25.0%
!! AGTATTTGACACATATGTTT+TGG - chr1_1:16842256-16842275 None:intergenic 25.0%
!! AGATATATTTTCCTCTGATT+TGG - chr1_1:16842313-16842332 None:intergenic 25.0%
! AAAGCCTAAAACAAATCAAT+TGG + chr1_1:16842551-16842570 Msa0011160:CDS 25.0%
! CAAGAAGAGAAAAAATCAAT+TGG + chr1_1:16842650-16842669 Msa0011160:CDS 25.0%
! AGAGAAAAAATCAATTGGTT+AGG + chr1_1:16842655-16842674 Msa0011160:CDS 25.0%
! TTGTTTAATTAAGACTAGAC+GGG + chr1_1:16843130-16843149 Msa0011160:intron 25.0%
!! TGACAACATTAGAAAGATTT+TGG + chr1_1:16843166-16843185 Msa0011160:intron 25.0%
!! GACAACATTAGAAAGATTTT+GGG + chr1_1:16843167-16843186 Msa0011160:intron 25.0%
!! GTTTCTCTTATAAGTTTTCT+AGG - chr1_1:16843327-16843346 None:intergenic 25.0%
! GGATCTAGAAATTAATAAGT+AGG + chr1_1:16843356-16843375 Msa0011160:intron 25.0%
!!! GGTTTGGTTGTTTTTTTTTT+TGG + chr1_1:16843450-16843469 Msa0011160:intron 25.0%
!!! TTTTTTTTTTTGGAGAGGAA+AGG + chr1_1:16843460-16843479 Msa0011160:intron 25.0%
!!! TGGTTGTTTTTTTTTTTGAG+AGG + chr1_1:16843488-16843507 Msa0011160:intron 25.0%
!!! GTTTTTTTTTTTGAGAGGAA+AGG + chr1_1:16843493-16843512 Msa0011160:intron 25.0%
!! TATATATCTCGGGTAATTTT+TGG - chr1_1:16843757-16843776 None:intergenic 25.0%
! TTACCCGAGATATATAATTT+AGG + chr1_1:16843761-16843780 Msa0011160:intron 25.0%
! TACCCGAGATATATAATTTA+GGG + chr1_1:16843762-16843781 Msa0011160:intron 25.0%
! AACCCTAAATTATATATCTC+GGG - chr1_1:16843767-16843786 None:intergenic 25.0%
! TTAGTCCATTTAGTGAATTT+AGG + chr1_1:16843844-16843863 Msa0011160:intron 25.0%
! TAGTCCATTTAGTGAATTTA+GGG + chr1_1:16843845-16843864 Msa0011160:intron 25.0%
! CATAGACATCATAAATTATG+GGG - chr1_1:16843963-16843982 None:intergenic 25.0%
! AAAAATCTGCCATATAAACA+TGG - chr1_1:16844274-16844293 None:intergenic 25.0%
!! ATGTTTATATGGCAGATTTT+TGG + chr1_1:16844273-16844292 Msa0011160:intron 25.0%
! TACAAATTTCAATGATTGGT+TGG + chr1_1:16844469-16844488 Msa0011160:intron 25.0%
!! ACAAATTTCAATGATTGGTT+GGG + chr1_1:16844470-16844489 Msa0011160:intron 25.0%
! TTTGATGCCATATATATGTA+AGG + chr1_1:16844514-16844533 Msa0011160:intron 25.0%
! TTGATGCCATATATATGTAA+GGG + chr1_1:16844515-16844534 Msa0011160:intron 25.0%
! TCATTTCCCTTACATATATA+TGG - chr1_1:16844524-16844543 None:intergenic 25.0%
! AAATGTGAGCTAAAATTCAA+TGG - chr1_1:16844786-16844805 None:intergenic 25.0%
!! AAATATGTTGTTCTTTTCCA+TGG - chr1_1:16845023-16845042 None:intergenic 25.0%
! ATTGCAATTGAATATCATTG+AGG - chr1_1:16845165-16845184 None:intergenic 25.0%
! AATAACAAAAAAGAAAAGGC+AGG - chr1_1:16845588-16845607 None:intergenic 25.0%
!!! TGATTCAATGTTTTTTCAAG+GGG + chr1_1:16846047-16846066 Msa0011160:intron 25.0%
! CTCGAATAATAATCTTTGTA+AGG - chr1_1:16846567-16846586 None:intergenic 25.0%
!!! GTTTAATTGATTTTTTGTGC+AGG + chr1_1:16846954-16846973 Msa0011160:intron 25.0%
!! TTACCGGATAATTTGAATTT+TGG + chr1_1:16847228-16847247 Msa0011160:intron 25.0%
! AGTCCAAAATTCAAATTATC+CGG - chr1_1:16847234-16847253 None:intergenic 25.0%
! TTGATTCATTGTGCTAAAAA+AGG - chr1_1:16847261-16847280 None:intergenic 25.0%
!! TTAGCACAATGAATCAATTT+TGG + chr1_1:16847264-16847283 Msa0011160:intron 25.0%
!! CAATGAATCAATTTTGGATT+TGG + chr1_1:16847270-16847289 Msa0011160:CDS 25.0%
! TTACGAATGAATTATCTGTT+TGG + chr1_1:16847364-16847383 Msa0011160:intron 25.0%
! TACGAATGAATTATCTGTTT+GGG + chr1_1:16847365-16847384 Msa0011160:intron 25.0%
!! ATACTTTGTGTGTATTTTTC+CGG + chr1_1:16847455-16847474 Msa0011160:intron 25.0%
! GATAACAAACAAATTTACGA+AGG - chr1_1:16847585-16847604 None:intergenic 25.0%
!!! AATTTGTTTGTTATCAGTGT+CGG + chr1_1:16847590-16847609 Msa0011160:intron 25.0%
!!! ATTTTGTAACAATGATAACG+TGG + chr1_1:16847918-16847937 Msa0011160:CDS 25.0%
!!! AACTTTGCTATTATAGAAAC+AGG - chr1_1:16847979-16847998 None:intergenic 25.0%
!!! ACTAAAGGCAGTTTTAAAAT+AGG + chr1_1:16848049-16848068 Msa0011160:three_prime_UTR 25.0%
!! CAAAATTTTCAGAAAAATGG+GGG - chr1_1:16848098-16848117 None:intergenic 25.0%
!! GCACAAAATTTTCAGAAAAA+TGG - chr1_1:16848101-16848120 None:intergenic 25.0%
TTGGATGAGAATCTTTGTTA+GGG - chr1_1:16838105-16838124 None:intergenic 30.0%
ATTGGATGAGAATCTTTGTT+AGG - chr1_1:16838106-16838125 None:intergenic 30.0%
ATTGAGGAGATTGATGAAAA+GGG - chr1_1:16838285-16838304 None:intergenic 30.0%
AATTGAGGAGATTGATGAAA+AGG - chr1_1:16838286-16838305 None:intergenic 30.0%
AATTCAAAAGGTGAATGAGA+CGG - chr1_1:16838682-16838701 None:intergenic 30.0%
! TGATTATCGTGATTCTGAAA+CGG + chr1_1:16838735-16838754 Msa0011160:CDS 30.0%
TCTAATGGTAATTTCTTCAG+GGG + chr1_1:16838952-16838971 Msa0011160:CDS 30.0%
AATATCAACATCCACTTCAA+CGG - chr1_1:16839040-16839059 None:intergenic 30.0%
ATCCTAATGAGAAAAAAGAG+GGG + chr1_1:16839223-16839242 Msa0011160:CDS 30.0%
!! GAAGAAAAGTATTAAGAGAG+TGG + chr1_1:16839470-16839489 Msa0011160:CDS 30.0%
GAAAATCAATGCTGTTGATA+AGG + chr1_1:16839635-16839654 Msa0011160:CDS 30.0%
ACAATACTAGAAACACAAGA+TGG - chr1_1:16839828-16839847 None:intergenic 30.0%
AAATCAACCAGTTAGATTGT+GGG + chr1_1:16839958-16839977 Msa0011160:CDS 30.0%
ATTTAGATGTAGGATGTTCA+TGG + chr1_1:16840027-16840046 Msa0011160:CDS 30.0%
GAAAAGAAAGATGTTAAGAC+TGG + chr1_1:16840581-16840600 Msa0011160:CDS 30.0%
!! GATGTTAAGACTGGTTTAAA+TGG + chr1_1:16840590-16840609 Msa0011160:CDS 30.0%
! TGACAGTGATGATGAAAATA+AGG + chr1_1:16840832-16840851 Msa0011160:CDS 30.0%
TGAATTTAGTGATTCAGTTG+CGG + chr1_1:16840919-16840938 Msa0011160:CDS 30.0%
AGAAAACTGAACATTTGGAA+TGG - chr1_1:16841209-16841228 None:intergenic 30.0%
AACACAGAAAACTGAACATT+TGG - chr1_1:16841214-16841233 None:intergenic 30.0%
! AATGTTCAGTTTTCTGTGTT+TGG + chr1_1:16841214-16841233 Msa0011160:CDS 30.0%
TGAGCATACAAGTAATATCA+CGG + chr1_1:16841267-16841286 Msa0011160:CDS 30.0%
TTTGCACAACATCTCTATAA+TGG - chr1_1:16841330-16841349 None:intergenic 30.0%
ATTATAGAGATGTTGTGCAA+AGG + chr1_1:16841329-16841348 Msa0011160:CDS 30.0%
ATCTAATGATCTCGATAAGA+AGG + chr1_1:16841372-16841391 Msa0011160:CDS 30.0%
TCTAATGATCTCGATAAGAA+GGG + chr1_1:16841373-16841392 Msa0011160:CDS 30.0%
TTATCGGATATGTATTCTCA+AGG + chr1_1:16841499-16841518 Msa0011160:CDS 30.0%
TATCGGATATGTATTCTCAA+GGG + chr1_1:16841500-16841519 Msa0011160:CDS 30.0%
AACTCAGTAATCATTCTATC+TGG - chr1_1:16841541-16841560 None:intergenic 30.0%
! GCAAATGTTTTCATCATCAT+CGG - chr1_1:16841572-16841591 None:intergenic 30.0%
! GATGATGATGAAAACATTTG+CGG + chr1_1:16841571-16841590 Msa0011160:CDS 30.0%
! ATGATGATGAAAACATTTGC+GGG + chr1_1:16841572-16841591 Msa0011160:CDS 30.0%
AAATCCAAATAGCGTATCTA+TGG + chr1_1:16841603-16841622 Msa0011160:CDS 30.0%
AATAACCCTTGAAAGCTTTA+GGG - chr1_1:16841840-16841859 None:intergenic 30.0%
!!! TTTTAAGGCATTGATTGAAG+AGG - chr1_1:16841899-16841918 None:intergenic 30.0%
!! AAGTTCTTCTTTTCGAGAAT+TGG - chr1_1:16842012-16842031 None:intergenic 30.0%
! ATCAAAACAGCTCTATTTTC+AGG - chr1_1:16842216-16842235 None:intergenic 30.0%
!!! GCAACCAATTGATTTGTTTT+AGG - chr1_1:16842558-16842577 None:intergenic 30.0%
TCTTCTTGTAATAGCTATCA+GGG - chr1_1:16842638-16842657 None:intergenic 30.0%
TCAGAATTCACTACGTTATT+GGG - chr1_1:16842720-16842739 None:intergenic 30.0%
AATAACGTAGTGAATTCTGA+CGG + chr1_1:16842720-16842739 Msa0011160:CDS 30.0%
! ATAGTAAAGTACTTCGCAAT+AGG + chr1_1:16842751-16842770 Msa0011160:CDS 30.0%
! TCTACCATCTTTTCTACTAT+AGG - chr1_1:16843198-16843217 None:intergenic 30.0%
! CATAGTTTTTGATAGAACAC+TGG + chr1_1:16843386-16843405 Msa0011160:intron 30.0%
!!! GGTTGTTTTTTTTTTTGGAG+AGG + chr1_1:16843455-16843474 Msa0011160:intron 30.0%
!!! AGGCTTGGTTGTTTTTTTTT+TGG + chr1_1:16843513-16843532 Msa0011160:intron 30.0%
!!! TTTTTTTTTGGTCCTCTCAT+TGG + chr1_1:16843525-16843544 Msa0011160:intron 30.0%
! GATAGTGTACAAAGTTTTTG+GGG - chr1_1:16843715-16843734 None:intergenic 30.0%
! CGATAGTGTACAAAGTTTTT+GGG - chr1_1:16843716-16843735 None:intergenic 30.0%
! TCGATAGTGTACAAAGTTTT+TGG - chr1_1:16843717-16843736 None:intergenic 30.0%
TTGCAAGAACTAAACTAGAT+AGG - chr1_1:16843808-16843827 None:intergenic 30.0%
AGTCCATTTAGTGAATTTAG+GGG + chr1_1:16843846-16843865 Msa0011160:intron 30.0%
!! AGCATAGAAGAGTATCTTAT+AGG + chr1_1:16843920-16843939 Msa0011160:intron 30.0%
GTCTATGTATGCTCTATAAT+AGG + chr1_1:16843976-16843995 Msa0011160:intron 30.0%
TTGTCTAAATAAAGAACAGC+AGG + chr1_1:16844030-16844049 Msa0011160:intron 30.0%
TGTCTAAATAAAGAACAGCA+GGG + chr1_1:16844031-16844050 Msa0011160:intron 30.0%
! ATAATAGGTATTGTGCCTTA+TGG - chr1_1:16844231-16844250 None:intergenic 30.0%
AATGAAGAAAGACTTAACTG+TGG + chr1_1:16844865-16844884 Msa0011160:intron 30.0%
! AAAATTCTTCTGGAAATGAC+AGG + chr1_1:16844958-16844977 Msa0011160:CDS 30.0%
! AAATTCTTCTGGAAATGACA+GGG + chr1_1:16844959-16844978 Msa0011160:CDS 30.0%
AAATTAAAGAGCGGAAAACA+TGG - chr1_1:16845133-16845152 None:intergenic 30.0%
! ATGTTTTCCGCTCTTTAATT+TGG + chr1_1:16845132-16845151 Msa0011160:intron 30.0%
AACACAACCAAATTAAAGAG+CGG - chr1_1:16845142-16845161 None:intergenic 30.0%
!! CTTTGGAAATCCAAAGTTTT+AGG + chr1_1:16845273-16845292 Msa0011160:CDS 30.0%
!!! AAATCCAAAGTTTTAGGCAT+TGG + chr1_1:16845279-16845298 Msa0011160:CDS 30.0%
TATTGATATGACAAAAGCTC+TGG - chr1_1:16845557-16845576 None:intergenic 30.0%
! CTTAGCATTTTATGACACAA+TGG + chr1_1:16845791-16845810 Msa0011160:intron 30.0%
! CTGATCAAACTCTAAAAACA+CGG + chr1_1:16845816-16845835 Msa0011160:intron 30.0%
TGTGTAAATGAGTATGATGA+TGG + chr1_1:16845906-16845925 Msa0011160:intron 30.0%
!! AATGAGTATGATGATGGTTA+AGG + chr1_1:16845912-16845931 Msa0011160:intron 30.0%
GGATATTAGTATTGCCTTTA+TGG + chr1_1:16846133-16846152 Msa0011160:intron 30.0%
ATTTGCAGATATGTTCGAAT+TGG + chr1_1:16846600-16846619 Msa0011160:intron 30.0%
TGGCAATTGAAAAAGTTAGA+TGG + chr1_1:16846670-16846689 Msa0011160:CDS 30.0%
! TGTCAGTTTTTCACAAGATT+TGG + chr1_1:16846738-16846757 Msa0011160:CDS 30.0%
! GTCAGTTTTTCACAAGATTT+GGG + chr1_1:16846739-16846758 Msa0011160:CDS 30.0%
AAGATTTGGGAAATGTAACA+AGG + chr1_1:16846752-16846771 Msa0011160:CDS 30.0%
TTATGAGTCAATTTGCAGTT+TGG - chr1_1:16846858-16846877 None:intergenic 30.0%
! AAACTGCAAATTGACTCATA+AGG + chr1_1:16846857-16846876 Msa0011160:CDS 30.0%
!!! ATTTTTTGTGCAGGTTATTC+CGG + chr1_1:16846963-16846982 Msa0011160:intron 30.0%
! TGCAAAAAGTATGAACAATC+AGG - chr1_1:16846997-16847016 None:intergenic 30.0%
!! GATTGTTCATACTTTTTGCA+AGG + chr1_1:16846997-16847016 Msa0011160:CDS 30.0%
!!! TCTGACAAAATTTTTTTGGC+AGG + chr1_1:16847070-16847089 Msa0011160:intron 30.0%
TTCACATTGACATGTCTATA+TGG - chr1_1:16847118-16847137 None:intergenic 30.0%
TATTTGTGAAGGGTTTCTTA+AGG + chr1_1:16847150-16847169 Msa0011160:CDS 30.0%
ATTTGTGAAGGGTTTCTTAA+GGG + chr1_1:16847151-16847170 Msa0011160:CDS 30.0%
! GATTTGGTATTTCAAGAACA+GGG + chr1_1:16847286-16847305 Msa0011160:CDS 30.0%
AAATTTACGAAGGTTAGTGT+AGG - chr1_1:16847575-16847594 None:intergenic 30.0%
GGAAAGAAAAGAAAAAGATC+AGG + chr1_1:16847709-16847728 Msa0011160:CDS 30.0%
TACATAAAAAACAAAGGGGT+GGG - chr1_1:16848173-16848192 None:intergenic 30.0%
TTACATAAAAAACAAAGGGG+TGG - chr1_1:16848174-16848193 None:intergenic 30.0%
AAAAATTACCTGCTCTAACT+CGG + chr1_1:16848243-16848262 Msa0011160:three_prime_UTR 30.0%
! TGATGAGTGTTTTGTGATTG+TGG - chr1_1:16838080-16838099 None:intergenic 35.0%
TTGAGGAGATTGATGAAAAG+GGG - chr1_1:16838284-16838303 None:intergenic 35.0%
AGGGGGTAAAAATGTAATTG+AGG - chr1_1:16838301-16838320 None:intergenic 35.0%
GGTTTGATTCAGATTCGTAT+CGG - chr1_1:16838459-16838478 None:intergenic 35.0%
! GTCTCATTCACCTTTTGAAT+TGG + chr1_1:16838681-16838700 Msa0011160:CDS 35.0%
!! GATTATCGTGATTCTGAAAC+GGG + chr1_1:16838736-16838755 Msa0011160:CDS 35.0%
!! TTTTGAATCTGTTTCTTCGG+CGG - chr1_1:16838850-16838869 None:intergenic 35.0%
!! AAAAGAAGAGTGCTTTGCTT+AGG + chr1_1:16838866-16838885 Msa0011160:CDS 35.0%
AACGTAACTGTTCAACATCT+CGG - chr1_1:16838921-16838940 None:intergenic 35.0%
GTAATTTCTTCAGGGGTAAT+GGG + chr1_1:16838959-16838978 Msa0011160:CDS 35.0%
AAAGGTGAAGAGAGGAAAAA+AGG + chr1_1:16839009-16839028 Msa0011160:CDS 35.0%
AAGGTGAAGAGAGGAAAAAA+GGG + chr1_1:16839010-16839029 Msa0011160:CDS 35.0%
ATATCAACATCCACTTCAAC+GGG - chr1_1:16839039-16839058 None:intergenic 35.0%
GATGCTTCACAAAAGAATGT+AGG + chr1_1:16839189-16839208 Msa0011160:CDS 35.0%
!!! AACCCCTCTTTTTTCTCATT+AGG - chr1_1:16839228-16839247 None:intergenic 35.0%
TGGTACTCATACTCGTAAAT+TGG + chr1_1:16839266-16839285 Msa0011160:CDS 35.0%
TTTCTTCTTCTTCACAACCT+TGG - chr1_1:16839295-16839314 None:intergenic 35.0%
! AAGAAGAAGAAAGCTGTTTC+TGG + chr1_1:16839303-16839322 Msa0011160:CDS 35.0%
! AATACTTTGGGGAAGAATGT+AGG + chr1_1:16839351-16839370 Msa0011160:CDS 35.0%
TAATTCGCATGGGAAAAATG+AGG + chr1_1:16839383-16839402 Msa0011160:CDS 35.0%
ATTAAGAGAGTGGTGAAGAA+AGG + chr1_1:16839480-16839499 Msa0011160:CDS 35.0%
TTCTGCAAAGCCTAATAGTT+CGG + chr1_1:16839503-16839522 Msa0011160:CDS 35.0%
! TGCCTCTGAAAATGTCAAAA+CGG + chr1_1:16839596-16839615 Msa0011160:CDS 35.0%
!! TGCATTGGCTGAAGATAAAA+AGG + chr1_1:16839683-16839702 Msa0011160:CDS 35.0%
ATTGGCTGAAGATAAAAAGG+AGG + chr1_1:16839686-16839705 Msa0011160:CDS 35.0%
TTGGCTGAAGATAAAAAGGA+GGG + chr1_1:16839687-16839706 Msa0011160:CDS 35.0%
TCACAGGAATATAAGAACGA+CGG + chr1_1:16839744-16839763 Msa0011160:CDS 35.0%
AAAGAATCCAGGTTTGAAAG+AGG + chr1_1:16839783-16839802 Msa0011160:CDS 35.0%
TAGTGTGACACATATTGACA+AGG + chr1_1:16839905-16839924 Msa0011160:CDS 35.0%
GAAATCAACCAGTTAGATTG+TGG + chr1_1:16839957-16839976 Msa0011160:CDS 35.0%
GAAAGGAAACTACTAACAGT+GGG + chr1_1:16840177-16840196 Msa0011160:CDS 35.0%
AGTGGGAATAATGACATTGA+TGG + chr1_1:16840194-16840213 Msa0011160:CDS 35.0%
GAATAATGACATTGATGGAG+AGG + chr1_1:16840199-16840218 Msa0011160:CDS 35.0%
AGAGGCTTATTGTGAAAAGA+TGG + chr1_1:16840217-16840236 Msa0011160:CDS 35.0%
!!! ATGGTTGCTTTTTCGAGTTT+AGG + chr1_1:16840311-16840330 Msa0011160:CDS 35.0%
! TCAGTACACTCGTATTTTGT+AGG - chr1_1:16840367-16840386 None:intergenic 35.0%
TGTATCACTGTTCACCAATT+TGG + chr1_1:16840425-16840444 Msa0011160:CDS 35.0%
TCACCAATTTGGTATCATGA+AGG + chr1_1:16840436-16840455 Msa0011160:CDS 35.0%
CATCCTTCATGATACCAAAT+TGG - chr1_1:16840442-16840461 None:intergenic 35.0%
TCACAATTCTCAGCAGATAT+GGG - chr1_1:16840494-16840513 None:intergenic 35.0%
TTTCACTTGGATTCGATGTA+AGG + chr1_1:16840543-16840562 Msa0011160:CDS 35.0%
TTCACTTGGATTCGATGTAA+GGG + chr1_1:16840544-16840563 Msa0011160:CDS 35.0%
CTCTATCAGCATCATTTGAA+TGG - chr1_1:16840658-16840677 None:intergenic 35.0%
CATTCAAATGATGCTGATAG+AGG + chr1_1:16840656-16840675 Msa0011160:CDS 35.0%
! AGGCTCAAGAATTTTATCGA+AGG + chr1_1:16840676-16840695 Msa0011160:CDS 35.0%
AGATCATTCTATTCAAAGCC+TGG + chr1_1:16840721-16840740 Msa0011160:CDS 35.0%
TGGATAGTGAGAAAAAATCC+AGG - chr1_1:16840742-16840761 None:intergenic 35.0%
!!! TTTTTTCTCACTATCCAACC+AGG + chr1_1:16840745-16840764 Msa0011160:CDS 35.0%
!!! ACTTTTTTCCTCTTAGGAAC+TGG - chr1_1:16840863-16840882 None:intergenic 35.0%
TGGTTATCACTGAAACAGAT+AGG - chr1_1:16840968-16840987 None:intergenic 35.0%
TTAGCAGTATCACCTGAATA+AGG - chr1_1:16841061-16841080 None:intergenic 35.0%
GAGCATACAAGTAATATCAC+GGG + chr1_1:16841268-16841287 Msa0011160:CDS 35.0%
TACATATCCGATAAAGCGTA+AGG - chr1_1:16841493-16841512 None:intergenic 35.0%
! TGATGATGAAAACATTTGCG+GGG + chr1_1:16841573-16841592 Msa0011160:CDS 35.0%
TTGACCATAGATACGCTATT+TGG - chr1_1:16841610-16841629 None:intergenic 35.0%
!! TGTAACTTTGGAATGAGCTT+GGG - chr1_1:16841752-16841771 None:intergenic 35.0%
GAATAACCCTTGAAAGCTTT+AGG - chr1_1:16841841-16841860 None:intergenic 35.0%
! TTTGTCTTCGACTTTGGAAA+GGG - chr1_1:16841868-16841887 None:intergenic 35.0%
ATGCCTTAAAATCTCGAACT+TGG + chr1_1:16841908-16841927 Msa0011160:CDS 35.0%
! ATGCCAAGTTCGAGATTTTA+AGG - chr1_1:16841914-16841933 None:intergenic 35.0%
TAAAATCTCGAACTTGGCAT+CGG + chr1_1:16841914-16841933 Msa0011160:CDS 35.0%
!!! TTTTCGAGAATTGGCCTTTT+AGG - chr1_1:16842003-16842022 None:intergenic 35.0%
!! GTAAAGGTAACAGTCTTGTT+AGG + chr1_1:16842052-16842071 Msa0011160:CDS 35.0%
! ATTTGAGGTATAGCAGAAAC+TGG - chr1_1:16842141-16842160 None:intergenic 35.0%
!!! AACAGCTCTATTTTCAGGTT+TGG - chr1_1:16842211-16842230 None:intergenic 35.0%
!! GATTTGGTGTCAATATGTAG+AGG - chr1_1:16842297-16842316 None:intergenic 35.0%
ACATATTGACACCAAATCAG+AGG + chr1_1:16842299-16842318 Msa0011160:CDS 35.0%
TGTGAAAATGCATCTGATCT+TGG + chr1_1:16842366-16842385 Msa0011160:CDS 35.0%
GTGAAAATGCATCTGATCTT+GGG + chr1_1:16842367-16842386 Msa0011160:CDS 35.0%
! TTTTAGTACATCTTCAGAGC+AGG - chr1_1:16842421-16842440 None:intergenic 35.0%
TGTCAAGATGAAGCAAATGT+TGG + chr1_1:16842489-16842508 Msa0011160:CDS 35.0%
CTCTTCTTGTAATAGCTATC+AGG - chr1_1:16842639-16842658 None:intergenic 35.0%
GTCAGAATTCACTACGTTAT+TGG - chr1_1:16842721-16842740 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGA+TGG + chr1_1:16843191-16843210 Msa0011160:intron 35.0%
TAGTCAAATCACTAGAGGTA+GGG + chr1_1:16843296-16843315 Msa0011160:intron 35.0%
!!! TTTTTTTGAGAGGAAAGGCT+TGG + chr1_1:16843498-16843517 Msa0011160:intron 35.0%
ACTACTTTAGTTATCCATCC+TGG + chr1_1:16843668-16843687 Msa0011160:intron 35.0%
AACTTTGTACACTATCGAGT+TGG + chr1_1:16843719-16843738 Msa0011160:intron 35.0%
!!! TCGGGTAATTTTTGGTATCA+AGG - chr1_1:16843749-16843768 None:intergenic 35.0%
TAGCCCCTAAATTCACTAAA+TGG - chr1_1:16843852-16843871 None:intergenic 35.0%
TTGTTGTCAAATTTCCACCA+TGG + chr1_1:16844173-16844192 Msa0011160:intron 35.0%
AATACCTATTATATCCGCCA+TGG + chr1_1:16844239-16844258 Msa0011160:intron 35.0%
!!! TTATATGGCAGATTTTTGGC+TGG + chr1_1:16844277-16844296 Msa0011160:intron 35.0%
AAGAAACTAAACTAGGCCAT+GGG + chr1_1:16844361-16844380 Msa0011160:intron 35.0%
! ATCCACTGTCAACATTGATT+CGG - chr1_1:16844410-16844429 None:intergenic 35.0%
AATCAATGTTGACAGTGGAT+GGG + chr1_1:16844410-16844429 Msa0011160:intron 35.0%
ATGACTAAAGCAAAGTCAAG+AGG + chr1_1:16844540-16844559 Msa0011160:intron 35.0%
TGACTAAAGCAAAGTCAAGA+GGG + chr1_1:16844541-16844560 Msa0011160:intron 35.0%
TATTGCGTTAGAAGGTTCTA+AGG - chr1_1:16844590-16844609 None:intergenic 35.0%
AAAGGACACAGATCTCATTT+AGG - chr1_1:16844658-16844677 None:intergenic 35.0%
TTGTGCATTTCAGATGGAAA+AGG - chr1_1:16844676-16844695 None:intergenic 35.0%
CATCAATTGTGCATTTCAGA+TGG - chr1_1:16844682-16844701 None:intergenic 35.0%
! CAATTGATGATTGATAACCC+TGG + chr1_1:16844693-16844712 Msa0011160:intron 35.0%
CAAAATATACAAGGTCTCCA+GGG - chr1_1:16844713-16844732 None:intergenic 35.0%
ACACTCGTGCAAAATATACA+AGG - chr1_1:16844722-16844741 None:intergenic 35.0%
! TGTATATTTTGCACGAGTGT+TGG + chr1_1:16844722-16844741 Msa0011160:intron 35.0%
!!! ATTTTAGCTCACATTTGCTG+AGG + chr1_1:16844790-16844809 Msa0011160:intron 35.0%
AAGTTTAAATGAGACAGCAC+CGG - chr1_1:16844827-16844846 None:intergenic 35.0%
! CTTGGTAGCAAAAATTCTTC+TGG + chr1_1:16844948-16844967 Msa0011160:CDS 35.0%
AATTGCTTCTGTTGAGAAAG+AGG + chr1_1:16845214-16845233 Msa0011160:CDS 35.0%
ATTGCTTCTGTTGAGAAAGA+GGG + chr1_1:16845215-16845234 Msa0011160:CDS 35.0%
ATTTCCAAAGAGAAAACCCA+CGG - chr1_1:16845263-16845282 None:intergenic 35.0%
! TTCTTCCTACTCTTTGTTTG+AGG - chr1_1:16845528-16845547 None:intergenic 35.0%
CTTTATGCTTACTCTGACTT+TGG + chr1_1:16845651-16845670 Msa0011160:intron 35.0%
GTGTAGGAGAACGTATATTT+CGG + chr1_1:16845689-16845708 Msa0011160:intron 35.0%
TGTAGGAGAACGTATATTTC+GGG + chr1_1:16845690-16845709 Msa0011160:intron 35.0%
CTCAACTAACAAACCCTTTA+CGG - chr1_1:16845857-16845876 None:intergenic 35.0%
! ATCATGCGAACAAACTTTTG+TGG - chr1_1:16846021-16846040 None:intergenic 35.0%
!!! TTCAATGTTTTTTCAAGGGG+AGG + chr1_1:16846050-16846069 Msa0011160:intron 35.0%
! AAGTCAAACTTGCTTGGAAA+AGG - chr1_1:16846222-16846241 None:intergenic 35.0%
! CAAAACAAGTCAAACTTGCT+TGG - chr1_1:16846228-16846247 None:intergenic 35.0%
! ACAAGTTTGGTTTCCAAAAG+AGG + chr1_1:16846338-16846357 Msa0011160:CDS 35.0%
ATTCCAAGGAGATTAGTGAT+AGG + chr1_1:16846365-16846384 Msa0011160:CDS 35.0%
TTTCCTATCACTAATCTCCT+TGG - chr1_1:16846371-16846390 None:intergenic 35.0%
TATTCACCTACTTTCTGCAT+AGG - chr1_1:16846494-16846513 None:intergenic 35.0%
AGATATGTTCGAATTGGCAA+CGG + chr1_1:16846606-16846625 Msa0011160:intron 35.0%
ATTTCCGAGTTCGTTTCTTT+GGG - chr1_1:16846650-16846669 None:intergenic 35.0%
AATTTCCGAGTTCGTTTCTT+TGG - chr1_1:16846651-16846670 None:intergenic 35.0%
AAAGAAACGAACTCGGAAAT+TGG + chr1_1:16846650-16846669 Msa0011160:CDS 35.0%
TTTGGGAAATGTAACAAGGA+TGG + chr1_1:16846756-16846775 Msa0011160:CDS 35.0%
TTTGAGGGATCATGAATGTA+AGG - chr1_1:16846792-16846811 None:intergenic 35.0%
! GTACAGACAGCAATTTTTGA+GGG - chr1_1:16846807-16846826 None:intergenic 35.0%
ACATAAACCATTCAGGAACT+TGG - chr1_1:16846829-16846848 None:intergenic 35.0%
GAGATGAACATAAACCATTC+AGG - chr1_1:16846836-16846855 None:intergenic 35.0%
CTTCACAAATAGATGCCTTA+GGG - chr1_1:16847141-16847160 None:intergenic 35.0%
! CTAAGGCATCTATTTGTGAA+GGG + chr1_1:16847140-16847159 Msa0011160:CDS 35.0%
! TTAAGGGATATTGTGCTGAT+GGG + chr1_1:16847167-16847186 Msa0011160:CDS 35.0%
! GGATTTGGTATTTCAAGAAC+AGG + chr1_1:16847285-16847304 Msa0011160:CDS 35.0%
AATGAATTATCTGTTTGGGC+CGG + chr1_1:16847369-16847388 Msa0011160:intron 35.0%
!!! TTTCCCCTGCTTTGTTTTTT+CGG - chr1_1:16847694-16847713 None:intergenic 35.0%
ATGTTGATGCCTCAAATGAT+TGG - chr1_1:16847900-16847919 None:intergenic 35.0%
ACATAAAAAACAAAGGGGTG+GGG - chr1_1:16848172-16848191 None:intergenic 35.0%
AAAATTACCTGCTCTAACTC+GGG + chr1_1:16848244-16848263 Msa0011160:three_prime_UTR 35.0%
ATTGGGGATTGAGTTTGAGT+GGG - chr1_1:16837961-16837980 None:intergenic 40.0%
TATTGGGGATTGAGTTTGAG+TGG - chr1_1:16837962-16837981 None:intergenic 40.0%
AGAGAAGAACGATAAAGGAG+AGG - chr1_1:16838250-16838269 None:intergenic 40.0%
GAGGAAGAGAAGAACGATAA+AGG - chr1_1:16838255-16838274 None:intergenic 40.0%
TGAGGAGATTGATGAAAAGG+GGG - chr1_1:16838283-16838302 None:intergenic 40.0%
TGAATCAAACCCTAACCCTA+GGG + chr1_1:16838468-16838487 Msa0011160:CDS 40.0%
TGTAAAGGAAGGTTTCCCTA+GGG - chr1_1:16838486-16838505 None:intergenic 40.0%
AATTGGCATTGTCGGTGTAA+AGG - chr1_1:16838501-16838520 None:intergenic 40.0%
TGGATAAGGATGATTCGATG+TGG - chr1_1:16838557-16838576 None:intergenic 40.0%
! AATTCTGCTGGAATCGATTC+TGG - chr1_1:16838614-16838633 None:intergenic 40.0%
CCTTCTGTTATCAATTCTGC+TGG - chr1_1:16838626-16838645 None:intergenic 40.0%
! CCAGCAGAATTGATAACAGA+AGG + chr1_1:16838623-16838642 Msa0011160:CDS 40.0%
! GCAGAATTGATAACAGAAGG+TGG + chr1_1:16838626-16838645 Msa0011160:CDS 40.0%
! TTCACCTTTTGAATTGGCGA+AGG + chr1_1:16838687-16838706 Msa0011160:CDS 40.0%
TCATCCTTCGCCAATTCAAA+AGG - chr1_1:16838694-16838713 None:intergenic 40.0%
GAAACGGGTAGGTATAGTAT+TGG + chr1_1:16838751-16838770 Msa0011160:CDS 40.0%
GTAGTAATAGCGGTAGTAGA+GGG + chr1_1:16838773-16838792 Msa0011160:CDS 40.0%
ACATCTCGGTTCCTATGATT+AGG - chr1_1:16838907-16838926 None:intergenic 40.0%
GGTAATTTCTTCAGGGGTAA+TGG + chr1_1:16838958-16838977 Msa0011160:CDS 40.0%
!! GGTAATGGGAAAGATCAACA+TGG + chr1_1:16838973-16838992 Msa0011160:CDS 40.0%
GGAAAGATCAACATGGAAGA+GGG + chr1_1:16838980-16838999 Msa0011160:CDS 40.0%
TTAACTTCTGTTGAAGCCAG+TGG + chr1_1:16839246-16839265 Msa0011160:CDS 40.0%
TTTACGAGTATGAGTACCAC+TGG - chr1_1:16839265-16839284 None:intergenic 40.0%
TACTCGTAAATTGGCATCCA+AGG + chr1_1:16839275-16839294 Msa0011160:CDS 40.0%
!! AAGAAGAAAGCTGTTTCTGG+TGG + chr1_1:16839306-16839325 Msa0011160:CDS 40.0%
GTGATGGTTGTAATTCGCAT+GGG + chr1_1:16839373-16839392 Msa0011160:CDS 40.0%
AAAAATGAGGTGGGAGTTTC+TGG + chr1_1:16839396-16839415 Msa0011160:CDS 40.0%
CTTCTTCTTGACAACCTTAG+AGG - chr1_1:16839454-16839473 None:intergenic 40.0%
TCTGCAAAGCCTAATAGTTC+GGG + chr1_1:16839504-16839523 Msa0011160:CDS 40.0%
AAACTGTGGTAGCAGATAGT+GGG + chr1_1:16839565-16839584 Msa0011160:CDS 40.0%
! GCCTCTGAAAATGTCAAAAC+GGG + chr1_1:16839597-16839616 Msa0011160:CDS 40.0%
!! TCCCGTTTTGACATTTTCAG+AGG - chr1_1:16839601-16839620 None:intergenic 40.0%
! TGTCAAAACGGGAACTTGTT+TGG + chr1_1:16839608-16839627 Msa0011160:CDS 40.0%
TGGCTGAAGATAAAAAGGAG+GGG + chr1_1:16839688-16839707 Msa0011160:CDS 40.0%
CTGATATTGGGAAAGAATCC+AGG + chr1_1:16839772-16839791 Msa0011160:CDS 40.0%
GTGTAATTCTGTTCCTGACT+TGG + chr1_1:16839881-16839900 Msa0011160:CDS 40.0%
CCTACATCTAAATGTTTCCC+AGG - chr1_1:16840020-16840039 None:intergenic 40.0%
CCTGGGAAACATTTAGATGT+AGG + chr1_1:16840017-16840036 Msa0011160:CDS 40.0%
TTGTAGGATCACTGGAATTG+AGG - chr1_1:16840151-16840170 None:intergenic 40.0%
TGATCCTACAAGTTCAGGAA+AGG + chr1_1:16840160-16840179 Msa0011160:CDS 40.0%
GTTTCCTTTCCTGAACTTGT+AGG - chr1_1:16840167-16840186 None:intergenic 40.0%
GGAAAGGAAACTACTAACAG+TGG + chr1_1:16840176-16840195 Msa0011160:CDS 40.0%
AGATGGTTCCTGTGTTCAAT+CGG + chr1_1:16840234-16840253 Msa0011160:CDS 40.0%
! GTTCAATCGGTGTTCTACTT+CGG + chr1_1:16840247-16840266 Msa0011160:CDS 40.0%
!! TTTCGAGTTTAGGAGACACT+AGG + chr1_1:16840321-16840340 Msa0011160:CDS 40.0%
TTTAGGAGACACTAGGATTC+AGG + chr1_1:16840328-16840347 Msa0011160:CDS 40.0%
! AAATACGAGTGTACTGATGC+AGG + chr1_1:16840370-16840389 Msa0011160:CDS 40.0%
! AATACGAGTGTACTGATGCA+GGG + chr1_1:16840371-16840390 Msa0011160:CDS 40.0%
TGATGTTGGATCGTCTAGTT+TGG + chr1_1:16840397-16840416 Msa0011160:CDS 40.0%
CACAATTCTCAGCAGATATG+GGG - chr1_1:16840493-16840512 None:intergenic 40.0%
GTCACAATTCTCAGCAGATA+TGG - chr1_1:16840495-16840514 None:intergenic 40.0%
TCATTTGAATGGCTAACTGG+AGG - chr1_1:16840647-16840666 None:intergenic 40.0%
GCATCATTTGAATGGCTAAC+TGG - chr1_1:16840650-16840669 None:intergenic 40.0%
AAGGATCCATGTTCTTCAGA+AGG + chr1_1:16840695-16840714 Msa0011160:CDS 40.0%
! TCTAAGCCTTCTGAAGAACA+TGG - chr1_1:16840704-16840723 None:intergenic 40.0%
!!! TGGGAAAAGAGCTTTTTCAG+AGG + chr1_1:16840787-16840806 Msa0011160:CDS 40.0%
!!! GCAGTGACTTTTTTCCTCTT+AGG - chr1_1:16840869-16840888 None:intergenic 40.0%
AGGAACTTCTGCATTAGATG+TGG - chr1_1:16840948-16840967 None:intergenic 40.0%
CGTCGTCTTTCTTATGTTCT+TGG - chr1_1:16840988-16841007 None:intergenic 40.0%
TGAGTCTACGGATGCAAATA+GGG + chr1_1:16841114-16841133 Msa0011160:CDS 40.0%
!! AACCAAGAGTTCTGAGCATT+TGG + chr1_1:16841138-16841157 Msa0011160:CDS 40.0%
TTCCAAATGCTCAGAACTCT+TGG - chr1_1:16841143-16841162 None:intergenic 40.0%
!! GAGTTCTGAGCATTTGGAAT+TGG + chr1_1:16841144-16841163 Msa0011160:CDS 40.0%
TATGGTCTCTACACAATGTG+AGG + chr1_1:16841177-16841196 Msa0011160:CDS 40.0%
GGGAGAAAAGATAGATTCAG+AGG + chr1_1:16841288-16841307 Msa0011160:CDS 40.0%
TTAGATAGCATATCAGCCCT+TGG - chr1_1:16841358-16841377 None:intergenic 40.0%
GATAGTGACTCCAATACCAT+CGG - chr1_1:16841437-16841456 None:intergenic 40.0%
GGATTTGCCTTACGCTTTAT+CGG + chr1_1:16841483-16841502 Msa0011160:CDS 40.0%
GATGATGAAAACATTTGCGG+GGG + chr1_1:16841574-16841593 Msa0011160:CDS 40.0%
AGCGTATCTATGGTCAAACA+TGG + chr1_1:16841613-16841632 Msa0011160:CDS 40.0%
AGGAAGTCAGATCATGCAAT+TGG + chr1_1:16841685-16841704 Msa0011160:CDS 40.0%
GCGTTATATTCCTTGGTACT+GGG - chr1_1:16841720-16841739 None:intergenic 40.0%
!! GTGTAACTTTGGAATGAGCT+TGG - chr1_1:16841753-16841772 None:intergenic 40.0%
TCATTCCAAAGTTACACCTC+TGG + chr1_1:16841756-16841775 Msa0011160:CDS 40.0%
CATTCCAAAGTTACACCTCT+GGG + chr1_1:16841757-16841776 Msa0011160:CDS 40.0%
CAAGATGAATTTAGACCCAG+AGG - chr1_1:16841775-16841794 None:intergenic 40.0%
TGTCATCCCTAAAGCTTTCA+AGG + chr1_1:16841831-16841850 Msa0011160:CDS 40.0%
GTCATCCCTAAAGCTTTCAA+GGG + chr1_1:16841832-16841851 Msa0011160:CDS 40.0%
! CTTTGTCTTCGACTTTGGAA+AGG - chr1_1:16841869-16841888 None:intergenic 40.0%
CAGGAATAGTTCCTCCTAAA+AGG + chr1_1:16841986-16842005 Msa0011160:CDS 40.0%
! TGAAGAGGAGATTTGAGGTA+TGG - chr1_1:16842097-16842116 None:intergenic 40.0%
AGACTTGAAGAGGAGATTTG+AGG - chr1_1:16842102-16842121 None:intergenic 40.0%
!! GATGGAGCAGTTTGATTTTC+AGG - chr1_1:16842456-16842475 None:intergenic 40.0%
AAACTGCTCCATCTAGCAAT+CGG + chr1_1:16842463-16842482 Msa0011160:CDS 40.0%
ATTGTCTCTACTGACGACAA+AGG + chr1_1:16842600-16842619 Msa0011160:CDS 40.0%
CTTGTAATAGCTATCAGGGA+TGG - chr1_1:16842634-16842653 None:intergenic 40.0%
! GAAGTACTTTACTATCCCCT+TGG - chr1_1:16842746-16842765 None:intergenic 40.0%
! GTAAAGTACTTCGCAATAGG+AGG + chr1_1:16842754-16842773 Msa0011160:CDS 40.0%
ATGCAATGCTGAGTTTCATC+AGG + chr1_1:16842861-16842880 Msa0011160:intron 40.0%
ATGCTGAGTTTCATCAGGAT+TGG + chr1_1:16842866-16842885 Msa0011160:intron 40.0%
ATCTACTGGAGCTTCAGTTA+CGG - chr1_1:16842924-16842943 None:intergenic 40.0%
TGTCTAGCAAGTAGCATAGA+CGG - chr1_1:16843002-16843021 None:intergenic 40.0%
GTAGTCAAATCACTAGAGGT+AGG + chr1_1:16843295-16843314 Msa0011160:intron 40.0%
AGTCAAATCACTAGAGGTAG+GGG + chr1_1:16843297-16843316 Msa0011160:intron 40.0%
AAACCTTATTCCGCTAAGTG+GGG - chr1_1:16843435-16843454 None:intergenic 40.0%
CAAACCTTATTCCGCTAAGT+GGG - chr1_1:16843436-16843455 None:intergenic 40.0%
!!! TTTTTTGGAGAGGAAAGGCT+TGG + chr1_1:16843465-16843484 Msa0011160:intron 40.0%
TAGTTATCCATCCTGGATTG+CGG + chr1_1:16843675-16843694 Msa0011160:intron 40.0%
TCACCAACATCACAAAGTGA+CGG + chr1_1:16843893-16843912 Msa0011160:intron 40.0%
TCACTCTGTTCTTCTACTCA+AGG - chr1_1:16844057-16844076 None:intergenic 40.0%
!! GAGACTTGCTAGTTTGAGAA+AGG + chr1_1:16844091-16844110 Msa0011160:intron 40.0%
! GCTAGTTTGAGAAAGGTATG+TGG + chr1_1:16844098-16844117 Msa0011160:intron 40.0%
CAGAAGATGAACAGTAGTCT+AGG + chr1_1:16844122-16844141 Msa0011160:intron 40.0%
TAGTCTAGGAAGAGACTGTA+CGG + chr1_1:16844136-16844155 Msa0011160:intron 40.0%
TTGTCAAATTTCCACCATGG+CGG + chr1_1:16844176-16844195 Msa0011160:intron 40.0%
! ATAGGTATTGTGCCTTATGG+AGG - chr1_1:16844228-16844247 None:intergenic 40.0%
GAAGAAACTAAACTAGGCCA+TGG + chr1_1:16844360-16844379 Msa0011160:intron 40.0%
!! TCCACTGTCAACATTGATTC+GGG - chr1_1:16844409-16844428 None:intergenic 40.0%
GAATCAATGTTGACAGTGGA+TGG + chr1_1:16844409-16844428 Msa0011160:intron 40.0%
GACTAAAGCAAAGTCAAGAG+GGG + chr1_1:16844542-16844561 Msa0011160:intron 40.0%
ACTAAAGCAAAGTCAAGAGG+GGG + chr1_1:16844543-16844562 Msa0011160:intron 40.0%
GCAAAATATACAAGGTCTCC+AGG - chr1_1:16844714-16844733 None:intergenic 40.0%
! TTTTACCACTCTTGTCTCCA+TGG + chr1_1:16845003-16845022 Msa0011160:CDS 40.0%
AGTTGTTCCTTATCTGCAGT+CGG + chr1_1:16845080-16845099 Msa0011160:CDS 40.0%
TTAAAGAGCGGAAAACATGG+AGG - chr1_1:16845130-16845149 None:intergenic 40.0%
TTTCCAAAGAGAAAACCCAC+GGG - chr1_1:16845262-16845281 None:intergenic 40.0%
!!! TCCAAAGTTTTAGGCATTGG+TGG + chr1_1:16845282-16845301 Msa0011160:CDS 40.0%
!!! CCAAAGTTTTAGGCATTGGT+GGG + chr1_1:16845283-16845302 Msa0011160:CDS 40.0%
! TTGGTGGGTCTAGTTTAAAG+TGG + chr1_1:16845298-16845317 Msa0011160:CDS 40.0%
GCACTCAAAGAAAGCTAATG+AGG + chr1_1:16845338-16845357 Msa0011160:CDS 40.0%
! GAAAGCTAATGAGGTTAGTC+TGG + chr1_1:16845347-16845366 Msa0011160:intron 40.0%
TTGGTCCTCAAACAAAGAGT+AGG + chr1_1:16845520-16845539 Msa0011160:intron 40.0%
! TACTCTGACTTTGGAAGTAG+CGG + chr1_1:16845660-16845679 Msa0011160:intron 40.0%
GAAGTAGCGGTTAATTGTGT+AGG + chr1_1:16845673-16845692 Msa0011160:intron 40.0%
TGGTTCAGTTCGATACAGAA+TGG + chr1_1:16845714-16845733 Msa0011160:CDS 40.0%
! TCAGAGGATTTCAGGTGAAT+TGG + chr1_1:16845756-16845775 Msa0011160:intron 40.0%
AACTAACAAACCCTTTACGG+AGG - chr1_1:16845854-16845873 None:intergenic 40.0%
!! TATGATGATGGTTAAGGTGC+AGG + chr1_1:16845918-16845937 Msa0011160:intron 40.0%
AACTGTAGATCTGTCCTTCA+TGG + chr1_1:16845945-16845964 Msa0011160:intron 40.0%
GAAGTTTCCTACTTCCATGA+AGG - chr1_1:16845962-16845981 None:intergenic 40.0%
! CTTCCTTTTGCTACAATGCT+GGG + chr1_1:16846111-16846130 Msa0011160:intron 40.0%
! TTCCTTTTGCTACAATGCTG+GGG + chr1_1:16846112-16846131 Msa0011160:intron 40.0%
!! AACCAAACTTGTACCGATTG+AGG - chr1_1:16846330-16846349 None:intergenic 40.0%
! CCTTGGAATGTAACCTCTTT+TGG - chr1_1:16846354-16846373 None:intergenic 40.0%
CCAAAAGAGGTTACATTCCA+AGG + chr1_1:16846351-16846370 Msa0011160:CDS 40.0%
CAAGTACCTATGCAGAAAGT+AGG + chr1_1:16846485-16846504 Msa0011160:intron 40.0%
GCAGAAAGTAGGTGAATAAG+AGG + chr1_1:16846496-16846515 Msa0011160:intron 40.0%
TCTTTGGGTCTCTGATAAGT+TGG - chr1_1:16846635-16846654 None:intergenic 40.0%
GGAAATGTAACAAGGATGGA+GGG + chr1_1:16846760-16846779 Msa0011160:CDS 40.0%
! GGTACAGACAGCAATTTTTG+AGG - chr1_1:16846808-16846827 None:intergenic 40.0%
ACATGTCAATGTGAACCCTA+AGG + chr1_1:16847123-16847142 Msa0011160:CDS 40.0%
CCTTCACAAATAGATGCCTT+AGG - chr1_1:16847142-16847161 None:intergenic 40.0%
! CCTAAGGCATCTATTTGTGA+AGG + chr1_1:16847139-16847158 Msa0011160:CDS 40.0%
CTTAAGGGATATTGTGCTGA+TGG + chr1_1:16847166-16847185 Msa0011160:CDS 40.0%
! ATATTGTGCTGATGGGAATG+AGG + chr1_1:16847174-16847193 Msa0011160:CDS 40.0%
TGGCACTATAAAGGTCAATC+TGG + chr1_1:16847315-16847334 Msa0011160:intron 40.0%
AACAACCAGAGAAGAGTTAC+CGG - chr1_1:16847391-16847410 None:intergenic 40.0%
TTGTTGTCCGATTGCTATGT+TGG + chr1_1:16847420-16847439 Msa0011160:intron 40.0%
AACACTGCCAACATAGCAAT+CGG - chr1_1:16847430-16847449 None:intergenic 40.0%
TGTAGGATCACAATAGGAGA+AGG - chr1_1:16847558-16847577 None:intergenic 40.0%
GGTTAGTGTAGGATCACAAT+AGG - chr1_1:16847564-16847583 None:intergenic 40.0%
!!! TTCCCCTGCTTTGTTTTTTC+GGG - chr1_1:16847693-16847712 None:intergenic 40.0%
AGATCAGGAGATCAGAACAA+CGG + chr1_1:16847724-16847743 Msa0011160:CDS 40.0%
CCAGGTTCAGAAATTTCAAC+GGG - chr1_1:16847775-16847794 None:intergenic 40.0%
CCCAGGTTCAGAAATTTCAA+CGG - chr1_1:16847776-16847795 None:intergenic 40.0%
CCGTTGAAATTTCTGAACCT+GGG + chr1_1:16847773-16847792 Msa0011160:CDS 40.0%
AATTTCTGAACCTGGGATGA+TGG + chr1_1:16847780-16847799 Msa0011160:CDS 40.0%
CACATCAAGACTGATGTAGT+CGG - chr1_1:16847854-16847873 None:intergenic 40.0%
CAGTCTTGATGTGTATGAAG+CGG + chr1_1:16847861-16847880 Msa0011160:CDS 40.0%
CACAGTTGACCAATCATTTG+AGG + chr1_1:16847888-16847907 Msa0011160:CDS 40.0%
! TGATAACGTGGATCTTCAGT+TGG + chr1_1:16847930-16847949 Msa0011160:CDS 40.0%
CCTATATTGTGTACAACGAC+AGG - chr1_1:16848141-16848160 None:intergenic 40.0%
CCTGTCGTTGTACACAATAT+AGG + chr1_1:16848138-16848157 Msa0011160:three_prime_UTR 40.0%
CATAAAAAACAAAGGGGTGG+GGG - chr1_1:16848171-16848190 None:intergenic 40.0%
AACAGTACACAGGTCTGATC+TGG - chr1_1:16837926-16837945 None:intergenic 45.0%
!! GAGGAAGTGTTGATCCATGA+CGG - chr1_1:16838146-16838165 None:intergenic 45.0%
! ATCTTGTACGGTGGTCTTGA+TGG - chr1_1:16838171-16838190 None:intergenic 45.0%
GATTCAGATTCGTATCGGAG+AGG - chr1_1:16838454-16838473 None:intergenic 45.0%
CTGAATCAAACCCTAACCCT+AGG + chr1_1:16838467-16838486 Msa0011160:CDS 45.0%
GTGTAAAGGAAGGTTTCCCT+AGG - chr1_1:16838487-16838506 None:intergenic 45.0%
GTGGTGGTAATTGGCATTGT+CGG - chr1_1:16838509-16838528 None:intergenic 45.0%
AATGCCAATTACCACCACCA+CGG + chr1_1:16838511-16838530 Msa0011160:CDS 45.0%
AGGATGATTCGATGTGGAAG+CGG - chr1_1:16838551-16838570 None:intergenic 45.0%
CATCCTTATCCAGAACGTGA+CGG + chr1_1:16838565-16838584 Msa0011160:CDS 45.0%
GATTCTGGCGGAATCAATTC+TGG - chr1_1:16838599-16838618 None:intergenic 45.0%
!! ATCGTGATTCTGAAACGGGT+AGG + chr1_1:16838740-16838759 Msa0011160:CDS 45.0%
GGTAGTAATAGCGGTAGTAG+AGG + chr1_1:16838772-16838791 Msa0011160:CDS 45.0%
GGGAAAGATCAACATGGAAG+AGG + chr1_1:16838979-16838998 Msa0011160:CDS 45.0%
! CATGGAAGAGGGTACATGAA+AGG + chr1_1:16838991-16839010 Msa0011160:CDS 45.0%
GGTACATGAAAGGTGAAGAG+AGG + chr1_1:16839001-16839020 Msa0011160:CDS 45.0%
ACATCAACACCGGAAGTTGA+AGG - chr1_1:16839111-16839130 None:intergenic 45.0%
!! TTCAACTTCCGGTGTTGATG+TGG + chr1_1:16839110-16839129 Msa0011160:CDS 45.0%
!! TCAACTTCCGGTGTTGATGT+GGG + chr1_1:16839111-16839130 Msa0011160:CDS 45.0%
AACAGAACCCACATCAACAC+CGG - chr1_1:16839121-16839140 None:intergenic 45.0%
GTTGATGTGGGTTCTGTTTC+TGG + chr1_1:16839123-16839142 Msa0011160:CDS 45.0%
TTGGGGAAGAATGTAGGTGA+TGG + chr1_1:16839357-16839376 Msa0011160:CDS 45.0%
! GGTGATGGTTGTAATTCGCA+TGG + chr1_1:16839372-16839391 Msa0011160:CDS 45.0%
TTCGCATGGGAAAAATGAGG+TGG + chr1_1:16839386-16839405 Msa0011160:CDS 45.0%
TCGCATGGGAAAAATGAGGT+GGG + chr1_1:16839387-16839406 Msa0011160:CDS 45.0%
! TCCTCGTAAATTGGCCTCTA+AGG + chr1_1:16839437-16839456 Msa0011160:CDS 45.0%
ACCTTAGAGGCCAATTTACG+AGG - chr1_1:16839441-16839460 None:intergenic 45.0%
CACAGTTTCACCAACTGCAT+TGG - chr1_1:16839553-16839572 None:intergenic 45.0%
!! CAATGCAGTTGGTGAAACTG+TGG + chr1_1:16839551-16839570 Msa0011160:CDS 45.0%
GAAACTGTGGTAGCAGATAG+TGG + chr1_1:16839564-16839583 Msa0011160:CDS 45.0%
! GACATTTTCAGAGGCAGCAT+TGG - chr1_1:16839592-16839611 None:intergenic 45.0%
! CAAAACGGGAACTTGTTTGG+AGG + chr1_1:16839611-16839630 Msa0011160:CDS 45.0%
AATGCATTCCCTTGATCGTC+TGG - chr1_1:16839669-16839688 None:intergenic 45.0%
AGACGATCAAGGGAATGCAT+TGG + chr1_1:16839668-16839687 Msa0011160:CDS 45.0%
TATTCCTGTGACCTGCATTC+TGG - chr1_1:16839735-16839754 None:intergenic 45.0%
AACGACGGAGCTTCTGATAT+TGG + chr1_1:16839759-16839778 Msa0011160:CDS 45.0%
ACGACGGAGCTTCTGATATT+GGG + chr1_1:16839760-16839779 Msa0011160:CDS 45.0%
GAATCCAGGTTTGAAAGAGG+TGG + chr1_1:16839786-16839805 Msa0011160:CDS 45.0%
ACTTCCACCTCTTTCAAACC+TGG - chr1_1:16839793-16839812 None:intergenic 45.0%
TGTGTCACACTAACCAAGTC+AGG - chr1_1:16839897-16839916 None:intergenic 45.0%
GCTTGTTCCCACAATCTAAC+TGG - chr1_1:16839968-16839987 None:intergenic 45.0%
! AGTGAAGTATCTCTATCGCC+TGG + chr1_1:16839999-16840018 Msa0011160:CDS 45.0%
! GTGAAGTATCTCTATCGCCT+GGG + chr1_1:16840000-16840019 Msa0011160:CDS 45.0%
TCCAGTGATCCTACAAGTTC+AGG + chr1_1:16840155-16840174 Msa0011160:CDS 45.0%
TCCTGAACTTGTAGGATCAC+TGG - chr1_1:16840159-16840178 None:intergenic 45.0%
! GTAGAACACCGATTGAACAC+AGG - chr1_1:16840245-16840264 None:intergenic 45.0%
AAAGCAACCATTCCACTGCT+TGG - chr1_1:16840302-16840321 None:intergenic 45.0%
CATGAAGGATGCTGAAAAGC+TGG + chr1_1:16840451-16840470 Msa0011160:CDS 45.0%
TTCTCACTATCCAACCAGGT+TGG + chr1_1:16840749-16840768 Msa0011160:CDS 45.0%
TCTCACTATCCAACCAGGTT+GGG + chr1_1:16840750-16840769 Msa0011160:CDS 45.0%
TTGGGGACACAGCTTTACAT+GGG + chr1_1:16840768-16840787 Msa0011160:CDS 45.0%
AGGTTTCACCAGTTCCTAAG+AGG + chr1_1:16840852-16840871 Msa0011160:CDS 45.0%
GCTCAGTCGATACCTTATTC+AGG + chr1_1:16841046-16841065 Msa0011160:CDS 45.0%
! TCTGACTGCATTTTCACCAG+AGG + chr1_1:16841085-16841104 Msa0011160:CDS 45.0%
CAGAGGATCATCTGAGTCTA+CGG + chr1_1:16841102-16841121 Msa0011160:CDS 45.0%
CTGAGTCTACGGATGCAAAT+AGG + chr1_1:16841113-16841132 Msa0011160:CDS 45.0%
! GCATTTGGAATTGGAGCACT+CGG + chr1_1:16841153-16841172 Msa0011160:CDS 45.0%
CTCTACACAATGTGAGGACT+TGG + chr1_1:16841183-16841202 Msa0011160:CDS 45.0%
TTTCTGTGTTTGGCTGTGAG+CGG + chr1_1:16841224-16841243 Msa0011160:CDS 45.0%
ATGTTGTGCAAAGGTCTCCA+AGG + chr1_1:16841338-16841357 Msa0011160:CDS 45.0%
TGTTGTGCAAAGGTCTCCAA+GGG + chr1_1:16841339-16841358 Msa0011160:CDS 45.0%
GGCGTTATATTCCTTGGTAC+TGG - chr1_1:16841721-16841740 None:intergenic 45.0%
! GGTTCTGGCGTTATATTCCT+TGG - chr1_1:16841727-16841746 None:intergenic 45.0%
! TAGACCCAGAGGTGTAACTT+TGG - chr1_1:16841764-16841783 None:intergenic 45.0%
AATGGAAGCAAAAATCCGCC+AGG + chr1_1:16841805-16841824 Msa0011160:CDS 45.0%
GGAGTCTTTGTCTTCGACTT+TGG - chr1_1:16841874-16841893 None:intergenic 45.0%
!! AAGGCATTGATTGAAGAGGC+AGG - chr1_1:16841895-16841914 None:intergenic 45.0%
TTGACTCTAGGTAGAGAAGC+TGG - chr1_1:16841958-16841977 None:intergenic 45.0%
CCTGCTGAAAGTTTGACTCT+AGG - chr1_1:16841970-16841989 None:intergenic 45.0%
CCTAGAGTCAAACTTTCAGC+AGG + chr1_1:16841967-16841986 Msa0011160:CDS 45.0%
!!! TCGAGAATTGGCCTTTTAGG+AGG - chr1_1:16842000-16842019 None:intergenic 45.0%
! ATTTGAGGTATGGCAGCAAC+TGG - chr1_1:16842087-16842106 None:intergenic 45.0%
GGTATAGCAGAAACTGGAGT+AGG - chr1_1:16842135-16842154 None:intergenic 45.0%
TCTACCAACCCACCATCTTT+GGG + chr1_1:16842162-16842181 Msa0011160:CDS 45.0%
!! TAAACCCAAAGATGGTGGGT+TGG - chr1_1:16842169-16842188 None:intergenic 45.0%
! AACCCACCATCTTTGGGTTT+AGG + chr1_1:16842168-16842187 Msa0011160:CDS 45.0%
GTTTCGCCTAAACCCAAAGA+TGG - chr1_1:16842177-16842196 None:intergenic 45.0%
GGTTTAGGCGAAACACCTAA+GGG + chr1_1:16842183-16842202 Msa0011160:CDS 45.0%
!!! TTTTCAGGTTTGGTGCCCTT+AGG - chr1_1:16842201-16842220 None:intergenic 45.0%
! TTTTCACAGAAGCCACTGGA+AGG - chr1_1:16842354-16842373 None:intergenic 45.0%
! TGCATTTTCACAGAAGCCAC+TGG - chr1_1:16842358-16842377 None:intergenic 45.0%
AACTGCTCCATCTAGCAATC+GGG + chr1_1:16842464-16842483 Msa0011160:CDS 45.0%
TACTGACGACAAAGGCCAAA+CGG + chr1_1:16842608-16842627 Msa0011160:CDS 45.0%
TTGCAACTGTCTGGTTGACA+TGG - chr1_1:16842695-16842714 None:intergenic 45.0%
TATTGGGAGTTGCAACTGTC+TGG - chr1_1:16842704-16842723 None:intergenic 45.0%
TAGTGAATTCTGACGGCCAA+GGG + chr1_1:16842727-16842746 Msa0011160:CDS 45.0%
! GCAATAGGAGGTTTTCCAAG+AGG + chr1_1:16842766-16842785 Msa0011160:CDS 45.0%
! ATAGGAGGTTTTCCAAGAGG+CGG + chr1_1:16842769-16842788 Msa0011160:CDS 45.0%
AGAGAGAAGACCTGTGGATT+TGG + chr1_1:16843245-16843264 Msa0011160:intron 45.0%
! AGAAGACCTGTGGATTTGGT+AGG + chr1_1:16843249-16843268 Msa0011160:intron 45.0%
AGGAAGGAGAAGAGATCAGA+TGG + chr1_1:16843269-16843288 Msa0011160:intron 45.0%
AAGGAGAAGAGATCAGATGG+AGG + chr1_1:16843272-16843291 Msa0011160:intron 45.0%
AGGAGAAGAGATCAGATGGA+GGG + chr1_1:16843273-16843292 Msa0011160:intron 45.0%
GAGGGTAGTCAAATCACTAG+AGG + chr1_1:16843291-16843310 Msa0011160:intron 45.0%
CCAAACCTTATTCCGCTAAG+TGG - chr1_1:16843437-16843456 None:intergenic 45.0%
CCACTTAGCGGAATAAGGTT+TGG + chr1_1:16843434-16843453 Msa0011160:intron 45.0%
! AGTCCGTCACTTTGTGATGT+TGG - chr1_1:16843899-16843918 None:intergenic 45.0%
AAGAGACTGTACGGTTGAGT+AGG + chr1_1:16844145-16844164 Msa0011160:intron 45.0%
AGATTGTGTCAGCCTCCATA+AGG + chr1_1:16844213-16844232 Msa0011160:intron 45.0%
CCATATAAACATGGCGTAGC+AGG - chr1_1:16844265-16844284 None:intergenic 45.0%
CCTGCTACGCCATGTTTATA+TGG + chr1_1:16844262-16844281 Msa0011160:intron 45.0%
CCATGGGATGCTGTTAATTC+CGG + chr1_1:16844377-16844396 Msa0011160:intron 45.0%
CATGGGATGCTGTTAATTCC+GGG + chr1_1:16844378-16844397 Msa0011160:intron 45.0%
!! ACATTGATTCGGGTCATTCC+CGG - chr1_1:16844399-16844418 None:intergenic 45.0%
ACCCGAATCAATGTTGACAG+TGG + chr1_1:16844405-16844424 Msa0011160:intron 45.0%
CTAAAGCAAAGTCAAGAGGG+GGG + chr1_1:16844544-16844563 Msa0011160:intron 45.0%
TAAAGCAAAGTCAAGAGGGG+GGG + chr1_1:16844545-16844564 Msa0011160:intron 45.0%
ACCTTCTAACGCAATAGCAG+TGG + chr1_1:16844594-16844613 Msa0011160:intron 45.0%
CCTTCTAACGCAATAGCAGT+GGG + chr1_1:16844595-16844614 Msa0011160:intron 45.0%
TAACGCAATAGCAGTGGGAA+TGG + chr1_1:16844600-16844619 Msa0011160:intron 45.0%
! CTCACATTTGCTGAGGATTC+TGG + chr1_1:16844797-16844816 Msa0011160:intron 45.0%
TGGATTGCATTTGCAGTAGC+TGG + chr1_1:16844885-16844904 Msa0011160:intron 45.0%
CTTCAAGAGCCTCATTAGTG+TGG + chr1_1:16844922-16844941 Msa0011160:CDS 45.0%
ACCAAGTGTCCACACTAATG+AGG - chr1_1:16844934-16844953 None:intergenic 45.0%
! CTTTTCCATGGAGACAAGAG+TGG - chr1_1:16845011-16845030 None:intergenic 45.0%
GTTGTTCCTTATCTGCAGTC+GGG + chr1_1:16845081-16845100 Msa0011160:CDS 45.0%
TAAGTACCCGACTGCAGATA+AGG - chr1_1:16845090-16845109 None:intergenic 45.0%
AGAGGGATACTGTATACACC+AGG + chr1_1:16845232-16845251 Msa0011160:CDS 45.0%
CCCACCAATGCCTAAAACTT+TGG - chr1_1:16845286-16845305 None:intergenic 45.0%
AAGAAAGACCCAGCTTGTGT+TGG + chr1_1:16845501-16845520 Msa0011160:CDS 45.0%
TTTGAGGACCAACACAAGCT+GGG - chr1_1:16845512-16845531 None:intergenic 45.0%
! GGAGAACGTATATTTCGGGT+TGG + chr1_1:16845694-16845713 Msa0011160:intron 45.0%
GATACAGAATGGATCCTTCC+AGG + chr1_1:16845725-16845744 Msa0011160:CDS 45.0%
!! TGCTATTGACTCCTCCGTAA+AGG + chr1_1:16845840-16845859 Msa0011160:intron 45.0%
!! GCTATTGACTCCTCCGTAAA+GGG + chr1_1:16845841-16845860 Msa0011160:intron 45.0%
GATCTGTCCTTCATGGAAGT+AGG + chr1_1:16845952-16845971 Msa0011160:intron 45.0%
CCAGCATTGTAGCAAAAGGA+AGG - chr1_1:16846113-16846132 None:intergenic 45.0%
! CCTTCCTTTTGCTACAATGC+TGG + chr1_1:16846110-16846129 Msa0011160:intron 45.0%
ATCCCCAGCATTGTAGCAAA+AGG - chr1_1:16846117-16846136 None:intergenic 45.0%
TGCCTCAATCGGTACAAGTT+TGG + chr1_1:16846325-16846344 Msa0011160:CDS 45.0%
GAGACCCAAAGAAACGAACT+CGG + chr1_1:16846643-16846662 Msa0011160:CDS 45.0%
GGGAAATGTAACAAGGATGG+AGG + chr1_1:16846759-16846778 Msa0011160:CDS 45.0%
GTCTGTACCAAGTTCCTGAA+TGG + chr1_1:16846819-16846838 Msa0011160:CDS 45.0%
AGCGACCACATTCAATTCGT+TGG - chr1_1:16846904-16846923 None:intergenic 45.0%
GAACAATCAGGCATTCTCTC+CGG - chr1_1:16846985-16847004 None:intergenic 45.0%
TTTCAAGAACAGGGTGTGCT+TGG + chr1_1:16847295-16847314 Msa0011160:CDS 45.0%
CTTCTCTGGTTGTTCTTCTC+TGG + chr1_1:16847397-16847416 Msa0011160:intron 45.0%
CCGAAGAATGAACTGTTAGC+CGG - chr1_1:16847477-16847496 None:intergenic 45.0%
CCGGCTAACAGTTCATTCTT+CGG + chr1_1:16847474-16847493 Msa0011160:intron 45.0%
ATCACAATAGGAGAAGGAGG+CGG - chr1_1:16847552-16847571 None:intergenic 45.0%
AGGATCACAATAGGAGAAGG+AGG - chr1_1:16847555-16847574 None:intergenic 45.0%
!! CTGTCCAAGTTTTGACGCAA+CGG + chr1_1:16847630-16847649 Msa0011160:CDS 45.0%
!! TGTCCAAGTTTTGACGCAAC+GGG + chr1_1:16847631-16847650 Msa0011160:CDS 45.0%
GCATTTGCTTCCTTGAGTAC+AGG - chr1_1:16847659-16847678 None:intergenic 45.0%
ACCACCCGAAAAAACAAAGC+AGG + chr1_1:16847686-16847705 Msa0011160:CDS 45.0%
CCACCCGAAAAAACAAAGCA+GGG + chr1_1:16847687-16847706 Msa0011160:CDS 45.0%
CACCCGAAAAAACAAAGCAG+GGG + chr1_1:16847688-16847707 Msa0011160:CDS 45.0%
GAGATCAGAACAACGGTAGA+GGG + chr1_1:16847731-16847750 Msa0011160:CDS 45.0%
CCCGTTGAAATTTCTGAACC+TGG + chr1_1:16847772-16847791 Msa0011160:CDS 45.0%
TCACTCTGTTGAGGATGTCT+TGG - chr1_1:16847811-16847830 None:intergenic 45.0%
AAGACATCCTCAACAGAGTG+AGG + chr1_1:16847810-16847829 Msa0011160:CDS 45.0%
TCATGTTCCTCACTCTGTTG+AGG - chr1_1:16847820-16847839 None:intergenic 45.0%
TTCCACTTGCCTAAGTTTGC+AGG - chr1_1:16848026-16848045 None:intergenic 45.0%
AGGCAAGTGGAAGAGACTAA+AGG + chr1_1:16848034-16848053 Msa0011160:exon 45.0%
!!! TTGTATTTTTTATTTTTTAA+CGG - chr1_1:16843570-16843589 None:intergenic 5.0%
GAGTTTGAGTGGGTAGGCTT+GGG - chr1_1:16837951-16837970 None:intergenic 50.0%
TGAGTTTGAGTGGGTAGGCT+TGG - chr1_1:16837952-16837971 None:intergenic 50.0%
GGGATTGAGTTTGAGTGGGT+AGG - chr1_1:16837957-16837976 None:intergenic 50.0%
TGATCCATGACGGTTCACGA+CGG - chr1_1:16838136-16838155 None:intergenic 50.0%
! TTGTACGGTGGTCTTGATGG+TGG - chr1_1:16838168-16838187 None:intergenic 50.0%
! TCGGAGGAGCGTATCTTGTA+CGG - chr1_1:16838183-16838202 None:intergenic 50.0%
GAACGATAAAGGAGAGGCTG+AGG - chr1_1:16838244-16838263 None:intergenic 50.0%
GATTGATGAAAAGGGGGTGG+AGG - chr1_1:16838277-16838296 None:intergenic 50.0%
GGAGATTGATGAAAAGGGGG+TGG - chr1_1:16838280-16838299 None:intergenic 50.0%
ATTAGGGTTAGGGTTCCAGG+CGG - chr1_1:16838350-16838369 None:intergenic 50.0%
GATCGTCGGGATTAGGGTTA+GGG - chr1_1:16838360-16838379 None:intergenic 50.0%
GGAATCGATCGTCGGGATTA+GGG - chr1_1:16838366-16838385 None:intergenic 50.0%
! GGTGGTGGTGATGAGAATCA+CGG - chr1_1:16838390-16838409 None:intergenic 50.0%
TATCGGAGAGGTGGATAGGA+AGG - chr1_1:16838442-16838461 None:intergenic 50.0%
TTCGTATCGGAGAGGTGGAT+AGG - chr1_1:16838446-16838465 None:intergenic 50.0%
TCAGATTCGTATCGGAGAGG+TGG - chr1_1:16838451-16838470 None:intergenic 50.0%
GGAAGGTTTCCCTAGGGTTA+GGG - chr1_1:16838480-16838499 None:intergenic 50.0%
AGGAAGGTTTCCCTAGGGTT+AGG - chr1_1:16838481-16838500 None:intergenic 50.0%
GGCATTGTCGGTGTAAAGGA+AGG - chr1_1:16838497-16838516 None:intergenic 50.0%
!! TTGACCGTGGTGGTGGTAAT+TGG - chr1_1:16838518-16838537 None:intergenic 50.0%
TTGTGGCTAATTGACCGTGG+TGG - chr1_1:16838528-16838547 None:intergenic 50.0%
ATTCGATGTGGAAGCGGTTG+TGG - chr1_1:16838545-16838564 None:intergenic 50.0%
! ACACCGTCACGTTCTGGATA+AGG - chr1_1:16838571-16838590 None:intergenic 50.0%
TCTGGCGGAATCAATTCTGG+TGG - chr1_1:16838596-16838615 None:intergenic 50.0%
! TCTGCTGGAATCGATTCTGG+CGG - chr1_1:16838611-16838630 None:intergenic 50.0%
AAAAGGGAGTCCCGTTGAAG+TGG + chr1_1:16839026-16839045 Msa0011160:CDS 50.0%
!! GGAGTTTCTGGTGAAGCTAG+CGG + chr1_1:16839408-16839427 Msa0011160:CDS 50.0%
!! CGGTACTGGTCCTCGTAAAT+TGG + chr1_1:16839428-16839447 Msa0011160:CDS 50.0%
GGGTTGTCCATGCCGAATTT+GGG + chr1_1:16839708-16839727 Msa0011160:CDS 50.0%
GGTTGTCCATGCCGAATTTG+GGG + chr1_1:16839709-16839728 Msa0011160:CDS 50.0%
CTGCATTCTGGCCCCAAATT+CGG - chr1_1:16839723-16839742 None:intergenic 50.0%
AACCATTCCACTGCTTGGCA+GGG - chr1_1:16840297-16840316 None:intergenic 50.0%
GGAGACACTAGGATTCAGGA+TGG + chr1_1:16840332-16840351 Msa0011160:CDS 50.0%
! CTGATGCAGGGTTCTGATGT+TGG + chr1_1:16840383-16840402 Msa0011160:CDS 50.0%
AGATATGGGGACTTCACCAG+GGG - chr1_1:16840480-16840499 None:intergenic 50.0%
CAGATATGGGGACTTCACCA+GGG - chr1_1:16840481-16840500 None:intergenic 50.0%
CTCACTATCCAACCAGGTTG+GGG + chr1_1:16840751-16840770 Msa0011160:CDS 50.0%
GTTGGGGACACAGCTTTACA+TGG + chr1_1:16840767-16840786 Msa0011160:CDS 50.0%
GACGTTGCATCGTCAAGCAT+GGG + chr1_1:16841004-16841023 Msa0011160:CDS 50.0%
CGTAGACTCAGATGATCCTC+TGG - chr1_1:16841104-16841123 None:intergenic 50.0%
! GGAATTGGAGCACTCGGATA+TGG + chr1_1:16841159-16841178 Msa0011160:CDS 50.0%
GAAGGGTGATTCACTTGCTC+AGG + chr1_1:16841390-16841409 Msa0011160:CDS 50.0%
TGACTCCAATACCATCGGCA+GGG - chr1_1:16841432-16841451 None:intergenic 50.0%
GATGTAGTGACCCAGTACCA+AGG + chr1_1:16841707-16841726 Msa0011160:CDS 50.0%
!! ACTTTGGAATGAGCTTGGGC+TGG - chr1_1:16841748-16841767 None:intergenic 50.0%
ACTCTAGGTAGAGAAGCTGG+AGG - chr1_1:16841955-16841974 None:intergenic 50.0%
TCTCCTCTTCAAGTCTCGTG+AGG + chr1_1:16842106-16842125 Msa0011160:CDS 50.0%
TCTCCTCACGAGACTTGAAG+AGG - chr1_1:16842112-16842131 None:intergenic 50.0%
!! GGTGGGTTGGTAGAGATTTG+AGG - chr1_1:16842156-16842175 None:intergenic 50.0%
CTCTACCAACCCACCATCTT+TGG + chr1_1:16842161-16842180 Msa0011160:CDS 50.0%
CGCCTAAACCCAAAGATGGT+GGG - chr1_1:16842173-16842192 None:intergenic 50.0%
TCGCCTAAACCCAAAGATGG+TGG - chr1_1:16842174-16842193 None:intergenic 50.0%
GGGTTTAGGCGAAACACCTA+AGG + chr1_1:16842182-16842201 Msa0011160:CDS 50.0%
AGAGGAGATGTTCTCTGCAG+AGG - chr1_1:16842279-16842298 None:intergenic 50.0%
! TGGAAGGAGGTTCTAGCAAC+GGG - chr1_1:16842338-16842357 None:intergenic 50.0%
! CTGGAAGGAGGTTCTAGCAA+CGG - chr1_1:16842339-16842358 None:intergenic 50.0%
TTGCTAGAACCTCCTTCCAG+TGG + chr1_1:16842339-16842358 Msa0011160:CDS 50.0%
AGTACATCTTCAGAGCAGGC+TGG - chr1_1:16842417-16842436 None:intergenic 50.0%
TGACACTCCCGATTGCTAGA+TGG - chr1_1:16842474-16842493 None:intergenic 50.0%
GTAGTGAATTCTGACGGCCA+AGG + chr1_1:16842726-16842745 Msa0011160:CDS 50.0%
AGTGAATTCTGACGGCCAAG+GGG + chr1_1:16842728-16842747 Msa0011160:CDS 50.0%
GCATGTAGAGAGAAGACCTG+TGG + chr1_1:16843239-16843258 Msa0011160:intron 50.0%
! GACCTGTGGATTTGGTAGGA+AGG + chr1_1:16843253-16843272 Msa0011160:intron 50.0%
CTCCTTCCTACCAAATCCAC+AGG - chr1_1:16843258-16843277 None:intergenic 50.0%
CTTATTCCGCTAAGTGGGGT+CGG - chr1_1:16843431-16843450 None:intergenic 50.0%
TTTGGAGAGGAAAGGCTTGG+TGG + chr1_1:16843468-16843487 Msa0011160:intron 50.0%
AGACTGTACGGTTGAGTAGG+TGG + chr1_1:16844148-16844167 Msa0011160:intron 50.0%
ATGCTATAACACCGCCATGG+TGG - chr1_1:16844190-16844209 None:intergenic 50.0%
!! ACCATGGCGGTGTTATAGCA+TGG + chr1_1:16844189-16844208 Msa0011160:intron 50.0%
TCCATGCTATAACACCGCCA+TGG - chr1_1:16844193-16844212 None:intergenic 50.0%
!! CAGGCCATGGCGGATATAAT+AGG - chr1_1:16844246-16844265 None:intergenic 50.0%
TAGTCCATCGTTGACAGCAC+TGG + chr1_1:16844305-16844324 Msa0011160:intron 50.0%
CCGGAATTAACAGCATCCCA+TGG - chr1_1:16844380-16844399 None:intergenic 50.0%
! GGATGGGCTTGAGCTTGTAA+AGG + chr1_1:16844426-16844445 Msa0011160:intron 50.0%
CCCACTGCTATTGCGTTAGA+AGG - chr1_1:16844598-16844617 None:intergenic 50.0%
!! TGCTGAGGATTCTGGAACAC+CGG + chr1_1:16844805-16844824 Msa0011160:intron 50.0%
GCCTCATTAGTGTGGACACT+TGG + chr1_1:16844930-16844949 Msa0011160:CDS 50.0%
TCTGGAAATGACAGGGACTC+TGG + chr1_1:16844966-16844985 Msa0011160:CDS 50.0%
CTGGAAATGACAGGGACTCT+GGG + chr1_1:16844967-16844986 Msa0011160:CDS 50.0%
GGACTCTGGGCATTATCAGA+AGG + chr1_1:16844980-16844999 Msa0011160:CDS 50.0%
AACTGCAGCAACAGCAAGTG+TGG - chr1_1:16845463-16845482 None:intergenic 50.0%
GTTTGAGGACCAACACAAGC+TGG - chr1_1:16845513-16845532 None:intergenic 50.0%
ACAGAATGGATCCTTCCAGG+CGG + chr1_1:16845728-16845747 Msa0011160:CDS 50.0%
CGGACACTTCAGAGGATTTC+AGG + chr1_1:16845748-16845767 Msa0011160:CDS 50.0%
TCCCTATCCTCTGCCTCAAT+CGG + chr1_1:16846314-16846333 Msa0011160:CDS 50.0%
ACCGATTGAGGCAGAGGATA+GGG - chr1_1:16846318-16846337 None:intergenic 50.0%
! TACCGATTGAGGCAGAGGAT+AGG - chr1_1:16846319-16846338 None:intergenic 50.0%
!! ACTTGTACCGATTGAGGCAG+AGG - chr1_1:16846324-16846343 None:intergenic 50.0%
GGGGTCCAACGAATTGAATG+TGG + chr1_1:16846896-16846915 Msa0011160:intron 50.0%
GGGTGTGCTTGGCACTATAA+AGG + chr1_1:16847306-16847325 Msa0011160:CDS 50.0%
GCATGTAGATAAGCAGCAGG+AGG - chr1_1:16847527-16847546 None:intergenic 50.0%
GAGGCATGTAGATAAGCAGC+AGG - chr1_1:16847530-16847549 None:intergenic 50.0%
GTTCCCGTTGCGTCAAAACT+TGG - chr1_1:16847637-16847656 None:intergenic 50.0%
!!! CCCTGCTTTGTTTTTTCGGG+TGG - chr1_1:16847690-16847709 None:intergenic 50.0%
GGAGATCAGAACAACGGTAG+AGG + chr1_1:16847730-16847749 Msa0011160:CDS 50.0%
!! AACGGTAGAGGGCGTTACTT+TGG + chr1_1:16847742-16847761 Msa0011160:CDS 50.0%
GTCCAGAAGCCTGCAAACTT+AGG + chr1_1:16848014-16848033 Msa0011160:CDS 50.0%
TGCCTAAGTTTGCAGGCTTC+TGG - chr1_1:16848019-16848038 None:intergenic 50.0%
AGCCTGCAAACTTAGGCAAG+TGG + chr1_1:16848021-16848040 Msa0011160:exon 50.0%
GGCTTGGGACAACAGTACAC+AGG - chr1_1:16837936-16837955 None:intergenic 55.0%
GTTCACGACGGCGATTGGAT+TGG - chr1_1:16838124-16838143 None:intergenic 55.0%
!! TACGGTGGTCTTGATGGTGG+AGG - chr1_1:16838165-16838184 None:intergenic 55.0%
! GAGGAGCGTATCTTGTACGG+TGG - chr1_1:16838180-16838199 None:intergenic 55.0%
GGTGGAGGAAGGTGGTGAAT+CGG - chr1_1:16838202-16838221 None:intergenic 55.0%
!! GAAGAGAAGGTGGTGGAGGA+AGG - chr1_1:16838213-16838232 None:intergenic 55.0%
TGAGGAGGAGGAGGAAGAGA+AGG - chr1_1:16838226-16838245 None:intergenic 55.0%
TAAAGGAGAGGCTGAGGAGG+AGG - chr1_1:16838238-16838257 None:intergenic 55.0%
CGATAAAGGAGAGGCTGAGG+AGG - chr1_1:16838241-16838260 None:intergenic 55.0%
TGATGAAAAGGGGGTGGAGG+AGG - chr1_1:16838274-16838293 None:intergenic 55.0%
TTAGGGTTAGGGTTCCAGGC+GGG - chr1_1:16838349-16838368 None:intergenic 55.0%
GGGATTAGGGTTAGGGTTCC+AGG - chr1_1:16838353-16838372 None:intergenic 55.0%
CGATCGTCGGGATTAGGGTT+AGG - chr1_1:16838361-16838380 None:intergenic 55.0%
CGGAATCGATCGTCGGGATT+AGG - chr1_1:16838367-16838386 None:intergenic 55.0%
ATCACGGCGGAATCGATCGT+CGG - chr1_1:16838374-16838393 None:intergenic 55.0%
! GGTGGTGATGAGAATCACGG+CGG - chr1_1:16838387-16838406 None:intergenic 55.0%
AGAGGTGGATAGGAAGGAGG+AGG - chr1_1:16838436-16838455 None:intergenic 55.0%
TGGCTAATTGACCGTGGTGG+TGG - chr1_1:16838525-16838544 None:intergenic 55.0%
CGGTTGTGGCTAATTGACCG+TGG - chr1_1:16838531-16838550 None:intergenic 55.0%
GTGGAAACACCGTCACGTTC+TGG - chr1_1:16838577-16838596 None:intergenic 55.0%
TCTGGTGAAGCTAGCGGTAC+TGG + chr1_1:16839414-16839433 Msa0011160:CDS 55.0%
GCCTAATAGTTCGGGCGTGT+TGG + chr1_1:16839512-16839531 Msa0011160:CDS 55.0%
GCCAACACGCCCGAACTATT+AGG - chr1_1:16839516-16839535 None:intergenic 55.0%
! ACTGCATTGGCAACCGAAGG+TGG - chr1_1:16839540-16839559 None:intergenic 55.0%
! CCAACTGCATTGGCAACCGA+AGG - chr1_1:16839543-16839562 None:intergenic 55.0%
CCTTCGGTTGCCAATGCAGT+TGG + chr1_1:16839540-16839559 Msa0011160:CDS 55.0%
TGTCTGCGCCAGACGATCAA+GGG + chr1_1:16839658-16839677 Msa0011160:CDS 55.0%
GGGGTTGTCCATGCCGAATT+TGG + chr1_1:16839707-16839726 Msa0011160:CDS 55.0%
TTCTGGCCCCAAATTCGGCA+TGG - chr1_1:16839718-16839737 None:intergenic 55.0%
! CGAATTTGGGGCCAGAATGC+AGG + chr1_1:16839721-16839740 Msa0011160:CDS 55.0%
ACCATTCCACTGCTTGGCAG+GGG - chr1_1:16840296-16840315 None:intergenic 55.0%
CAACCATTCCACTGCTTGGC+AGG - chr1_1:16840298-16840317 None:intergenic 55.0%
GCAGATATGGGGACTTCACC+AGG - chr1_1:16840482-16840501 None:intergenic 55.0%
GTAAAGCTGTGTCCCCAACC+TGG - chr1_1:16840766-16840785 None:intergenic 55.0%
CGACGTTGCATCGTCAAGCA+TGG + chr1_1:16841003-16841022 Msa0011160:CDS 55.0%
GTGACTCCAATACCATCGGC+AGG - chr1_1:16841433-16841452 None:intergenic 55.0%
!! GAATGAGCTTGGGCTGGTTC+TGG - chr1_1:16841742-16841761 None:intergenic 55.0%
GGAAGCAAAAATCCGCCAGG+CGG + chr1_1:16841808-16841827 Msa0011160:CDS 55.0%
GGTATGGCAGCAACTGGAGT+AGG - chr1_1:16842081-16842100 None:intergenic 55.0%
! GGAAGGAGGTTCTAGCAACG+GGG - chr1_1:16842337-16842356 None:intergenic 55.0%
TCACAGAAGCCACTGGAAGG+AGG - chr1_1:16842351-16842370 None:intergenic 55.0%
AGCTATCAGGGATGGCCGTT+TGG - chr1_1:16842626-16842645 None:intergenic 55.0%
TCCAAGAGGCGGTCGCATAA+AGG + chr1_1:16842780-16842799 Msa0011160:CDS 55.0%
ACCTTTATGCGACCGCCTCT+TGG - chr1_1:16842784-16842803 None:intergenic 55.0%
GAGGCGGTCGCATAAAGGTA+TGG + chr1_1:16842785-16842804 Msa0011160:intron 55.0%
ATGTAGCCGACCCCACTTAG+CGG + chr1_1:16843422-16843441 Msa0011160:intron 55.0%
CGACCCCACTTAGCGGAATA+AGG + chr1_1:16843429-16843448 Msa0011160:intron 55.0%
CTCTACACCGCAATCCAGGA+TGG - chr1_1:16843685-16843704 None:intergenic 55.0%
GTCACTCTACACCGCAATCC+AGG - chr1_1:16843689-16843708 None:intergenic 55.0%
GGATTGCGGTGTAGAGTGAC+TGG + chr1_1:16843689-16843708 Msa0011160:intron 55.0%
AAACATGGCGTAGCAGGCCA+TGG - chr1_1:16844259-16844278 None:intergenic 55.0%
!! GCTGTCAACGATGGACTACG+TGG - chr1_1:16844303-16844322 None:intergenic 55.0%
GCTACCAGTGCTGTCAACGA+TGG - chr1_1:16844312-16844331 None:intergenic 55.0%
!! TCGTTGACAGCACTGGTAGC+AGG + chr1_1:16844312-16844331 Msa0011160:intron 55.0%
! AAAGTCAAGAGGGGGGGTGT+GGG + chr1_1:16844551-16844570 Msa0011160:intron 55.0%
TATACACCAGGTCGACCCGT+GGG + chr1_1:16845244-16845263 Msa0011160:CDS 55.0%
! CGACCCGTGGGTTTTCTCTT+TGG + chr1_1:16845256-16845275 Msa0011160:CDS 55.0%
!! AATCCTCTGAAGTGTCCGCC+TGG - chr1_1:16845746-16845765 None:intergenic 55.0%
TTGGGCCGGTAACTCTTCTC+TGG + chr1_1:16847383-16847402 Msa0011160:intron 55.0%
ACAATAGGAGAAGGAGGCGG+AGG - chr1_1:16847549-16847568 None:intergenic 55.0%
GCAACGGGAACCTGTACTCA+AGG + chr1_1:16847646-16847665 Msa0011160:CDS 55.0%
TTACCTGCTCTAACTCGGGC+AGG + chr1_1:16848248-16848267 Msa0011160:three_prime_UTR 55.0%
AAACCTGCCCGAGTTAGAGC+AGG - chr1_1:16848254-16848273 None:intergenic 55.0%
TGACGGTTCACGACGGCGAT+TGG - chr1_1:16838129-16838148 None:intergenic 60.0%
ATCGCCGTCGTGAACCGTCA+TGG + chr1_1:16838129-16838148 Msa0011160:exon 60.0%
GGAGGAAGGTGGTGAATCGG+AGG - chr1_1:16838199-16838218 None:intergenic 60.0%
!! GAGAAGGTGGTGGAGGAAGG+TGG - chr1_1:16838210-16838229 None:intergenic 60.0%
! GGAGGAAGAGAAGGTGGTGG+AGG - chr1_1:16838217-16838236 None:intergenic 60.0%
GGAGGAGGAAGAGAAGGTGG+TGG - chr1_1:16838220-16838239 None:intergenic 60.0%
GGAGGAGGAGGAAGAGAAGG+TGG - chr1_1:16838223-16838242 None:intergenic 60.0%
!! TAGGGTTCCAGGCGGGTTGA+GGG - chr1_1:16838342-16838361 None:intergenic 60.0%
!! TTAGGGTTCCAGGCGGGTTG+AGG - chr1_1:16838343-16838362 None:intergenic 60.0%
TCACGGCGGAATCGATCGTC+GGG - chr1_1:16838373-16838392 None:intergenic 60.0%
TAGGAAGGAGGAGGAGGAGG+AGG - chr1_1:16838427-16838446 None:intergenic 60.0%
GGATAGGAAGGAGGAGGAGG+AGG - chr1_1:16838430-16838449 None:intergenic 60.0%
GGTGGATAGGAAGGAGGAGG+AGG - chr1_1:16838433-16838452 None:intergenic 60.0%
CGGAGAGGTGGATAGGAAGG+AGG - chr1_1:16838439-16838458 None:intergenic 60.0%
ACCGCAGCGCCTTCAACTTC+CGG + chr1_1:16839099-16839118 Msa0011160:CDS 60.0%
!! ACCGGAAGTTGAAGGCGCTG+CGG - chr1_1:16839103-16839122 None:intergenic 60.0%
GTGTCTGCGCCAGACGATCA+AGG + chr1_1:16839657-16839676 Msa0011160:CDS 60.0%
CCATTCCACTGCTTGGCAGG+GGG - chr1_1:16840295-16840314 None:intergenic 60.0%
GCTGAAAAGCTGGTGTCCCC+TGG + chr1_1:16840461-16840480 Msa0011160:CDS 60.0%
AGCTGTGTCCCCAACCTGGT+TGG - chr1_1:16840762-16840781 None:intergenic 60.0%
TCCTGCCCTGCCGATGGTAT+TGG + chr1_1:16841424-16841443 Msa0011160:CDS 60.0%
TCCAATACCATCGGCAGGGC+AGG - chr1_1:16841428-16841447 None:intergenic 60.0%
TTAGGGATGACACCGCCTGG+CGG - chr1_1:16841823-16841842 None:intergenic 60.0%
!! GCTTTAGGGATGACACCGCC+TGG - chr1_1:16841826-16841845 None:intergenic 60.0%
CAAAGTCAAGAGGGGGGGTG+TGG + chr1_1:16844550-16844569 Msa0011160:intron 60.0%
GTATACACCAGGTCGACCCG+TGG + chr1_1:16845243-16845262 Msa0011160:CDS 60.0%
AGAAAACCCACGGGTCGACC+TGG - chr1_1:16845253-16845272 None:intergenic 60.0%
!! CTCTGAAGTGTCCGCCTGGA+AGG - chr1_1:16845742-16845761 None:intergenic 60.0%
CTTCCAGGCGGACACTTCAG+AGG + chr1_1:16845740-16845759 Msa0011160:CDS 60.0%
GCTTGCACACTGCCAGACAG+CGG + chr1_1:16846694-16846713 Msa0011160:CDS 60.0%
CTTACGAGCCAACCGCTGTC+TGG - chr1_1:16846709-16846728 None:intergenic 60.0%
CTTGGAGCGACCATCATCCC+AGG - chr1_1:16847793-16847812 None:intergenic 60.0%
AGGAGAGGCTGAGGAGGAGG+AGG - chr1_1:16838235-16838254 None:intergenic 65.0%
GGATACGGCGGTGTTCGAGG+GGG - chr1_1:16838318-16838337 None:intergenic 65.0%
GGGATACGGCGGTGTTCGAG+GGG - chr1_1:16838319-16838338 None:intergenic 65.0%
GGGGATACGGCGGTGTTCGA+GGG - chr1_1:16838320-16838339 None:intergenic 65.0%
!! AGGCGGGTTGAGGGGGGATA+CGG - chr1_1:16838333-16838352 None:intergenic 65.0%
!! AGGGTTCCAGGCGGGTTGAG+GGG - chr1_1:16838341-16838360 None:intergenic 65.0%
!! GAGGAGGGTGGTGATGGTGG+TGG - chr1_1:16838405-16838424 None:intergenic 65.0%
!! GAGGAGGAGGGTGGTGATGG+TGG - chr1_1:16838408-16838427 None:intergenic 65.0%
GAGGAGGAGGAGGGTGGTGA+TGG - chr1_1:16838411-16838430 None:intergenic 65.0%
GAGGAGGAGGAGGAGGAGGA+GGG - chr1_1:16838420-16838439 None:intergenic 65.0%
GAAGGAGGAGGAGGAGGAGG+AGG - chr1_1:16838424-16838443 None:intergenic 65.0%
!! GGGCGTGTTGGCTCCACCTT+CGG + chr1_1:16839524-16839543 Msa0011160:CDS 65.0%
GGGGCCAGAATGCAGGTCAC+AGG + chr1_1:16839728-16839747 Msa0011160:CDS 65.0%
TCCACTGCTTGGCAGGGGGA+TGG - chr1_1:16840291-16840310 None:intergenic 65.0%
CCCCCTGCCAAGCAGTGGAA+TGG + chr1_1:16840292-16840311 Msa0011160:CDS 65.0%
CATCGGCAGGGCAGGACACA+AGG - chr1_1:16841420-16841439 None:intergenic 65.0%
CTTGTGTCCTGCCCTGCCGA+TGG + chr1_1:16841418-16841437 Msa0011160:CDS 65.0%
CATGGCGTAGCAGGCCATGG+CGG - chr1_1:16844256-16844275 None:intergenic 65.0%
GCACACTGCCAGACAGCGGT+TGG + chr1_1:16846698-16846717 Msa0011160:CDS 65.0%
GGGGGATACGGCGGTGTTCG+AGG - chr1_1:16838321-16838340 None:intergenic 70.0%
! CGGGTTGAGGGGGGATACGG+CGG - chr1_1:16838330-16838349 None:intergenic 70.0%
GTATCCCCCCTCAACCCGCC+TGG + chr1_1:16838332-16838351 Msa0011160:CDS 70.0%
!! GGTTCCAGGCGGGTTGAGGG+GGG - chr1_1:16838339-16838358 None:intergenic 70.0%
!! GGGTTCCAGGCGGGTTGAGG+GGG - chr1_1:16838340-16838359 None:intergenic 70.0%
GAGGAGGAGGAGGAGGAGGG+TGG - chr1_1:16838417-16838436 None:intergenic 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr1_1:16838418-16838437 None:intergenic 70.0%
GCCATCCCCCTGCCAAGCAG+TGG + chr1_1:16840287-16840306 Msa0011160:CDS 70.0%
! GAGGGGGGGTGTGGGCAATG+TGG + chr1_1:16844559-16844578 Msa0011160:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 16837919 16848293 16837919 ID=Msa0011160;Name=Msa0011160
chr1_1 mRNA 16837919 16848293 16837919 ID=Msa0011160-mRNA-1;Parent=Msa0011160;Name=Msa0011160-mRNA-1;_AED=0.06;_eAED=0.06;_QI=229|0.8|0.90|1|1|1|11|258|2053
chr1_1 exon 16837919 16842801 16837919 ID=Msa0011160-mRNA-1:exon:6111;Parent=Msa0011160-mRNA-1
chr1_1 exon 16844901 16845102 16844901 ID=Msa0011160-mRNA-1:exon:6112;Parent=Msa0011160-mRNA-1
chr1_1 exon 16845209 16845359 16845209 ID=Msa0011160-mRNA-1:exon:6113;Parent=Msa0011160-mRNA-1
chr1_1 exon 16845456 16845537 16845456 ID=Msa0011160-mRNA-1:exon:6114;Parent=Msa0011160-mRNA-1
chr1_1 exon 16845695 16845769 16845695 ID=Msa0011160-mRNA-1:exon:6115;Parent=Msa0011160-mRNA-1
chr1_1 exon 16846306 16846396 16846306 ID=Msa0011160-mRNA-1:exon:6116;Parent=Msa0011160-mRNA-1
chr1_1 exon 16846608 16846878 16846608 ID=Msa0011160-mRNA-1:exon:6117;Parent=Msa0011160-mRNA-1
chr1_1 exon 16846976 16847018 16846976 ID=Msa0011160-mRNA-1:exon:6118;Parent=Msa0011160-mRNA-1
chr1_1 exon 16847092 16847195 16847092 ID=Msa0011160-mRNA-1:exon:6119;Parent=Msa0011160-mRNA-1
chr1_1 exon 16847268 16847327 16847268 ID=Msa0011160-mRNA-1:exon:6120;Parent=Msa0011160-mRNA-1
chr1_1 exon 16847607 16848293 16847607 ID=Msa0011160-mRNA-1:exon:6121;Parent=Msa0011160-mRNA-1
chr1_1 five_prime_UTR 16837919 16838147 16837919 ID=Msa0011160-mRNA-1:five_prime_utr;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16838148 16842801 16838148 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16844901 16845102 16844901 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16845209 16845359 16845209 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16845456 16845537 16845456 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16845695 16845769 16845695 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16846306 16846396 16846306 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16846608 16846878 16846608 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16846976 16847018 16846976 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16847092 16847195 16847092 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16847268 16847327 16847268 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 CDS 16847607 16848035 16847607 ID=Msa0011160-mRNA-1:cds;Parent=Msa0011160-mRNA-1
chr1_1 three_prime_UTR 16848036 16848293 16848036 ID=Msa0011160-mRNA-1:three_prime_utr;Parent=Msa0011160-mRNA-1
Gene Sequence

>Msa0011160

ATGGATCAACACTTCCTCCACCATCAAGACCACCGTACAAGATACGCTCCTCCGATTCACCACCTTCCTCCACCACCTTCTCTTCCTCCTCCTCCTCAGCCTCTCCTTTATCGTTCTTCTCTTCCTCCTCCACCCCCTTTTCATCAATCTCCTCAATTACATTTTTACCCCCTCGAACACCGCCGTATCCCCCCTCAACCCGCCTGGAACCCTAACCCTAATCCCGACGATCGATTCCGCCGTGATTCTCATCACCACCACCATCACCACCCTCCTCCTCCTCCTCCTCCTCCTTCCTATCCACCTCTCCGATACGAATCTGAATCAAACCCTAACCCTAGGGAAACCTTCCTTTACACCGACAATGCCAATTACCACCACCACGGTCAATTAGCCACAACCGCTTCCACATCGAATCATCCTTATCCAGAACGTGACGGTGTTTCCACCAGAATTGATTCCGCCAGAATCGATTCCAGCAGAATTGATAACAGAAGGTGGTTGAATGAAAGAAAAGTACACAGTTCATCACCGTCTCATTCACCTTTTGAATTGGCGAAGGATGAAATAAGTGCTTCAGTGAAACGTGATTATCGTGATTCTGAAACGGGTAGGTATAGTATTGGTAGTAATAGCGGTAGTAGAGGGAATAGCAGAGAGTTTAATCATCATAATCAGGGTCGTGAATTTAGTAGAACACCGCCGAAGAAACAGATTCAAAAGAAGAGTGCTTTGCTTAGGATTCAGAATATGAAACCTAATCATAGGAACCGAGATGTTGAACAGTTACGTTATGTTAATGATTCTAATGGTAATTTCTTCAGGGGTAATGGGAAAGATCAACATGGAAGAGGGTACATGAAAGGTGAAGAGAGGAAAAAAGGGAGTCCCGTTGAAGTGGATGTTGATATTTCGTTTGAATCGAATGTTTTTGTTGCTAAGCATATTGTTACCGCAGCGCCTTCAACTTCCGGTGTTGATGTGGGTTCTGTTTCTGGTAAACTGTCTTCTGTTGTTCAAACTATGAATGATAATGATAATGATGCTTCACAAAAGAATGTAGGTGATGATTGTAATCCTAATGAGAAAAAAGAGGGGTTAACTTCTGTTGAAGCCAGTGGTACTCATACTCGTAAATTGGCATCCAAGGTTGTGAAGAAGAAGAAAGCTGTTTCTGGTGGTGAAAATTTGAATGCTAATAAGAATACTTTGGGGAAGAATGTAGGTGATGGTTGTAATTCGCATGGGAAAAATGAGGTGGGAGTTTCTGGTGAAGCTAGCGGTACTGGTCCTCGTAAATTGGCCTCTAAGGTTGTCAAGAAGAAGAAAAGTATTAAGAGAGTGGTGAAGAAAGGTTCTGCAAAGCCTAATAGTTCGGGCGTGTTGGCTCCACCTTCGGTTGCCAATGCAGTTGGTGAAACTGTGGTAGCAGATAGTGGGTCCAATGCTGCCTCTGAAAATGTCAAAACGGGAACTTGTTTGGAGGAGAAAATCAATGCTGTTGATAAGGTGTCTGCGCCAGACGATCAAGGGAATGCATTGGCTGAAGATAAAAAGGAGGGGTTGTCCATGCCGAATTTGGGGCCAGAATGCAGGTCACAGGAATATAAGAACGACGGAGCTTCTGATATTGGGAAAGAATCCAGGTTTGAAAGAGGTGGAAGTATTTCAAATACGCCATCTTGTGTTTCTAGTATTGTAGATAGAATTAGTGGTTCTGATTGTTTAGATGTGTGTAATTCTGTTCCTGACTTGGTTAGTGTGACACATATTGACAAGGCTACTAAGTTATTAAATGGAAGTACTTCTGAAATCAACCAGTTAGATTGTGGGAACAAGCAATTGTGTCAGAGTGAAGTATCTCTATCGCCTGGGAAACATTTAGATGTAGGATGTTCATGGAATAGTAATCTTGTAGATGTAGGGAATGAAATGAATAACAATGTCATTTCTGCAGATATTATAAATACATATAATTCTGCTGATGACAGTGTTTACGTCCTCAATTCCAGTGATCCTACAAGTTCAGGAAAGGAAACTACTAACAGTGGGAATAATGACATTGATGGAGAGGCTTATTGTGAAAAGATGGTTCCTGTGTTCAATCGGTGTTCTACTTCGGATGCAAATTCAGATATAGCCATCCCCCTGCCAAGCAGTGGAATGGTTGCTTTTTCGAGTTTAGGAGACACTAGGATTCAGGATGGTCAAGATTGCCTACAAAATACGAGTGTACTGATGCAGGGTTCTGATGTTGGATCGTCTAGTTTGGAAGAGTGTATCACTGTTCACCAATTTGGTATCATGAAGGATGCTGAAAAGCTGGTGTCCCCTGGTGAAGTCCCCATATCTGCTGAGAATTGTGACATAGATATAACATTTCCAAATTCTAATATTTCACTTGGATTCGATGTAAGGGACACAAGTAAGATAGAAAAGAAAGATGTTAAGACTGGTTTAAATGGTTTGACTTTGAATTTGGATGATATATCTCTTCCTCCAGTTAGCCATTCAAATGATGCTGATAGAGGCTCAAGAATTTTATCGAAGGATCCATGTTCTTCAGAAGGCTTAGATCATTCTATTCAAAGCCTGGATTTTTTCTCACTATCCAACCAGGTTGGGGACACAGCTTTACATGGGAAAAGAGCTTTTTCAGAGGCTGAATTTTGTTTTGCAAATAATGACAGTGATGATGAAAATAAGGTTTCACCAGTTCCTAAGAGGAAAAAAGTCACTGCTAGTCTTCCAAATTTAACTGAATTTCAATCTGAATTTAGTGATTCAGTTGCGGCTACCACATCTAATGCAGAAGTTCCTATCTGTTTCAGTGATAACCAAGAACATAAGAAAGACGACGTTGCATCGTCAAGCATGGGTATGAGTATTAAGTCTAATGCTCAGTCGATACCTTATTCAGGTGATACTGCTAAATTGTCTGACTGCATTTTCACCAGAGGATCATCTGAGTCTACGGATGCAAATAGGGAAACCAAGAGTTCTGAGCATTTGGAATTGGAGCACTCGGATATGGTCTCTACACAATGTGAGGACTTGGCCATTCCAAATGTTCAGTTTTCTGTGTTTGGCTGTGAGCGGAATGACAATGCTACTCCAATTGAGCATACAAGTAATATCACGGGAGAAAAGATAGATTCAGAGGCTGCTGAAACCAATTACCATTATAGAGATGTTGTGCAAAGGTCTCCAAGGGCTGATATGCTATCTAATGATCTCGATAAGAAGGGTGATTCACTTGCTCAGGAGAACCTTGTGTCCTGCCCTGCCGATGGTATTGGAGTCACTATCAGTAATTCAAATAATGAATTGATTGAGGATTTGCCTTACGCTTTATCGGATATGTATTCTCAAGGGATGACATCTGACTTACCAGATAGAATGATTACTGAGTTTACAGCAACCGATGATGATGAAAACATTTGCGGGGGTGAAGAAAATCCAAATAGCGTATCTATGGTCAAACATGGTTCTGACTCAGATGCTTTTACTTCATCAAAACAGCATACTGAAAAAATTAGGAAGTCAGATCATGCAATTGGATGTAGTGACCCAGTACCAAGGAATATAACGCCAGAACCAGCCCAAGCTCATTCCAAAGTTACACCTCTGGGTCTAAATTCATCTTGTTTTGAATTAAATGGAAGCAAAAATCCGCCAGGCGGTGTCATCCCTAAAGCTTTCAAGGGTTATTCTTTTCCCTTTCCAAAGTCGAAGACAAAGACTCCTGCCTCTTCAATCAATGCCTTAAAATCTCGAACTTGGCATCGGACAGATGATAAAAATCCTCCAGCTTCTCTACCTAGAGTCAAACTTTCAGCAGGAATAGTTCCTCCTAAAAGGCCAATTCTCGAAAAGAAGAACTTTCCAAATACTTCTTACATTCGTAAAGGTAACAGTCTTGTTAGGAATCCTACTCCAGTTGCTGCCATACCTCAAATCTCCTCTTCAAGTCTCGTGAGGAGACCTACTCCAGTTTCTGCTATACCTCAAATCTCTACCAACCCACCATCTTTGGGTTTAGGCGAAACACCTAAGGGCACCAAACCTGAAAATAGAGCTGTTTTGATAGATCAGCCAATCTATTCCAAAACATATGTGTCAAATACTCCTCTGCAGAGAACATCTCCTCTACATATTGACACCAAATCAGAGGAAAATATATCTTCCCCGTTGCTAGAACCTCCTTCCAGTGGCTTCTGTGAAAATGCATCTGATCTTGGGAAGTTTATTGAAACTAATGATGCACCAGCCTGCTCTGAAGATGTACTAAAACAATATGAAACTCCTGAAAATCAAACTGCTCCATCTAGCAATCGGGAGTGTCAAGATGAAGCAAATGTTGGATATAATTCTTCTTTGAACTCAAAAAGAATAGTTTATATAAAGCCTAAAACAAATCAATTGGTTGCAACTTCGACTTCTTCTGATATTATTGTCTCTACTGACGACAAAGGCCAAACGGCCATCCCTGATAGCTATTACAAGAAGAGAAAAAATCAATTGGTTAGGACTACATTTGAAAACCATGTCAACCAGACAGTTGCAACTCCCAATAACGTAGTGAATTCTGACGGCCAAGGGGATAGTAAAGTACTTCGCAATAGGAGGTTTTCCAAGAGGCGGTCGCATAAAGTAGCTGGTATTTTGAGCAAATCTTCAAGAGCCTCATTAGTGTGGACACTTGGTAGCAAAAATTCTTCTGGAAATGACAGGGACTCTGGGCATTATCAGAAGGTTTTACCACTCTTGTCTCCATGGAAAAGAACAACATATTTAAGAAGCTTCATTCATAATTCTGCTTCAAGCTTCAATAGTTGTTCCTTATCTGCAGTCGGTAAGAAATTGCTTCTGTTGAGAAAGAGGGATACTGTATACACCAGGTCGACCCGTGGGTTTTCTCTTTGGAAATCCAAAGTTTTAGGCATTGGTGGGTCTAGTTTAAAGTGGTCAAAATCTATCGAGAAGCACTCAAAGAAAGCTAATGAGGAAGCCACACTTGCTGTTGCTGCAGTTGAGAAGAAGAAGAGAGAGAAGAAAGACCCAGCTTGTGTTGGTCCTCAAACAAAGAGAGAACGTATATTTCGGGTTGGTTCAGTTCGATACAGAATGGATCCTTCCAGGCGGACACTTCAGAGGATTTCAGATGATGAATCCCTATCCTCTGCCTCAATCGGTACAAGTTTGGTTTCCAAAAGAGGTTACATTCCAAGGAGATTAGTGATAGGAAATGATGAATATGTTCGAATTGGCAACGGAAACCAACTTATCAGAGACCCAAAGAAACGAACTCGGAAATTGGCAATTGAAAAAGTTAGATGGAGCTTGCACACTGCCAGACAGCGGTTGGCTCGTAAGCAGAAGTACTGTCAGTTTTTCACAAGATTTGGGAAATGTAACAAGGATGGAGGGAAGTGTCCTTACATTCATGATCCCTCAAAAATTGCTGTCTGTACCAAGTTCCTGAATGGTTTATGTTCATCTCCAAACTGCAAATTGACTCATAAGGTTATTCCGGAGAGAATGCCTGATTGTTCATACTTTTTGCAAGGCTTATGCTCAAACGAAAACTGTCCATATAGACATGTCAATGTGAACCCTAAGGCATCTATTTGTGAAGGGTTTCTTAAGGGATATTGTGCTGATGGGAATGAGCACAATGAATCAATTTTGGATTTGGTATTTCAAGAACAGGGTGTGCTTGGCACTATAAAGTGTCGGAAGAAGCACAGCTACGTCTGTCCAAGTTTTGACGCAACGGGAACCTGTACTCAAGGAAGCAAATGCAAGCTTCACCACCCGAAAAAACAAAGCAGGGGAAAGAAAAGAAAAAGATCAGGAGATCAGAACAACGGTAGAGGGCGTTACTTTGGTTCTATTCCCGTTGAAATTTCTGAACCTGGGATGATGGTCGCTCCAAGACATCCTCAACAGAGTGAGGAACATGAAGATGAACTAACCGACTACATCAGTCTTGATGTGTATGAAGCGGAAGACACAGTTGACCAATCATTTGAGGCATCAACATTTTGTAACAATGATAACGTGGATCTTCAGTTGGATACTTCTGATGAACTCATTAAACCTGTTTCTATAATAGCAAAGTTTGCTTTGCAATCTCAGTCCAGAAGCCTGCAAACTTAG
Protein sequence

>Msa0011160

MDQHFLHHQDHRTRYAPPIHHLPPPPSLPPPPQPLLYRSSLPPPPPFHQSPQLHFYPLEHRRIPPQPAWNPNPNPDDRFRRDSHHHHHHHPPPPPPPPSYPPLRYESESNPNPRETFLYTDNANYHHHGQLATTASTSNHPYPERDGVSTRIDSARIDSSRIDNRRWLNERKVHSSSPSHSPFELAKDEISASVKRDYRDSETGRYSIGSNSGSRGNSREFNHHNQGREFSRTPPKKQIQKKSALLRIQNMKPNHRNRDVEQLRYVNDSNGNFFRGNGKDQHGRGYMKGEERKKGSPVEVDVDISFESNVFVAKHIVTAAPSTSGVDVGSVSGKLSSVVQTMNDNDNDASQKNVGDDCNPNEKKEGLTSVEASGTHTRKLASKVVKKKKAVSGGENLNANKNTLGKNVGDGCNSHGKNEVGVSGEASGTGPRKLASKVVKKKKSIKRVVKKGSAKPNSSGVLAPPSVANAVGETVVADSGSNAASENVKTGTCLEEKINAVDKVSAPDDQGNALAEDKKEGLSMPNLGPECRSQEYKNDGASDIGKESRFERGGSISNTPSCVSSIVDRISGSDCLDVCNSVPDLVSVTHIDKATKLLNGSTSEINQLDCGNKQLCQSEVSLSPGKHLDVGCSWNSNLVDVGNEMNNNVISADIINTYNSADDSVYVLNSSDPTSSGKETTNSGNNDIDGEAYCEKMVPVFNRCSTSDANSDIAIPLPSSGMVAFSSLGDTRIQDGQDCLQNTSVLMQGSDVGSSSLEECITVHQFGIMKDAEKLVSPGEVPISAENCDIDITFPNSNISLGFDVRDTSKIEKKDVKTGLNGLTLNLDDISLPPVSHSNDADRGSRILSKDPCSSEGLDHSIQSLDFFSLSNQVGDTALHGKRAFSEAEFCFANNDSDDENKVSPVPKRKKVTASLPNLTEFQSEFSDSVAATTSNAEVPICFSDNQEHKKDDVASSSMGMSIKSNAQSIPYSGDTAKLSDCIFTRGSSESTDANRETKSSEHLELEHSDMVSTQCEDLAIPNVQFSVFGCERNDNATPIEHTSNITGEKIDSEAAETNYHYRDVVQRSPRADMLSNDLDKKGDSLAQENLVSCPADGIGVTISNSNNELIEDLPYALSDMYSQGMTSDLPDRMITEFTATDDDENICGGEENPNSVSMVKHGSDSDAFTSSKQHTEKIRKSDHAIGCSDPVPRNITPEPAQAHSKVTPLGLNSSCFELNGSKNPPGGVIPKAFKGYSFPFPKSKTKTPASSINALKSRTWHRTDDKNPPASLPRVKLSAGIVPPKRPILEKKNFPNTSYIRKGNSLVRNPTPVAAIPQISSSSLVRRPTPVSAIPQISTNPPSLGLGETPKGTKPENRAVLIDQPIYSKTYVSNTPLQRTSPLHIDTKSEENISSPLLEPPSSGFCENASDLGKFIETNDAPACSEDVLKQYETPENQTAPSSNRECQDEANVGYNSSLNSKRIVYIKPKTNQLVATSTSSDIIVSTDDKGQTAIPDSYYKKRKNQLVRTTFENHVNQTVATPNNVVNSDGQGDSKVLRNRRFSKRRSHKVAGILSKSSRASLVWTLGSKNSSGNDRDSGHYQKVLPLLSPWKRTTYLRSFIHNSASSFNSCSLSAVGKKLLLLRKRDTVYTRSTRGFSLWKSKVLGIGGSSLKWSKSIEKHSKKANEEATLAVAAVEKKKREKKDPACVGPQTKRERIFRVGSVRYRMDPSRRTLQRISDDESLSSASIGTSLVSKRGYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLAIEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGGKCPYIHDPSKIAVCTKFLNGLCSSPNCKLTHKVIPERMPDCSYFLQGLCSNENCPYRHVNVNPKASICEGFLKGYCADGNEHNESILDLVFQEQGVLGTIKCRKKHSYVCPSFDATGTCTQGSKCKLHHPKKQSRGKKRKRSGDQNNGRGRYFGSIPVEISEPGMMVAPRHPQQSEEHEDELTDYISLDVYEAEDTVDQSFEASTFCNNDNVDLQLDTSDELIKPVSIIAKFALQSQSRSLQT*