Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379820 | XP_024635234.1 | 95.581 | 611 | 19 | 2 | 1 | 611 | 1 | 603 | 0.0 | 1203 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379820 | sp|Q8L7W1|MSL3_ARATH | 54.735 | 528 | 212 | 6 | 77 | 590 | 66 | 580 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379820 | A0A396IZX7 | 95.581 | 611 | 19 | 2 | 1 | 611 | 1 | 603 | 0.0 | 1203 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011160 | Msa0379820 | 0.805867 | 1.084739e-49 | -8.615850e-47 |
| Msa0015100 | Msa0379820 | 0.817325 | 3.495668e-52 | -8.615850e-47 |
| Msa0049770 | Msa0379820 | 0.805819 | 1.110284e-49 | -8.615850e-47 |
| Msa0051100 | Msa0379820 | 0.823657 | 1.231057e-53 | -8.615850e-47 |
| Msa0051460 | Msa0379820 | 0.807662 | 4.530392e-50 | -8.615850e-47 |
| Msa0071550 | Msa0379820 | 0.821303 | 4.337328e-53 | -8.615850e-47 |
| Msa0088550 | Msa0379820 | 0.811321 | 7.422971e-51 | -8.615850e-47 |
| Msa0093440 | Msa0379820 | 0.806823 | 6.820446e-50 | -8.615850e-47 |
| Msa0101650 | Msa0379820 | 0.803217 | 3.872774e-49 | -8.615850e-47 |
| Msa0135360 | Msa0379820 | 0.811234 | 7.754212e-51 | -8.615850e-47 |
| Msa0143920 | Msa0379820 | 0.809133 | 2.199601e-50 | -8.615850e-47 |
| Msa0179860 | Msa0379820 | 0.801544 | 8.566078e-49 | -8.615850e-47 |
| Msa0200870 | Msa0379820 | 0.808381 | 3.184771e-50 | -8.615850e-47 |
| Msa0366470 | Msa0379820 | 0.813146 | 2.967508e-51 | -8.615850e-47 |
| Msa0379820 | Msa0379850 | 0.964428 | 2.583332e-123 | -8.615850e-47 |
| Msa0379820 | Msa0411000 | 0.849800 | 2.562454e-60 | -8.615850e-47 |
| Msa0379820 | Msa0419620 | -0.832870 | 7.385135e-56 | -8.615850e-47 |
| Msa0379820 | Msa0421920 | -0.804654 | 1.946891e-49 | -8.615850e-47 |
| Msa0379820 | Msa0429170 | 0.968461 | 1.039679e-128 | -8.615850e-47 |
| Msa0379820 | Msa0438050 | 0.824050 | 9.956524e-54 | -8.615850e-47 |
| Msa0379820 | Msa0454940 | 0.823967 | 1.041384e-53 | -8.615850e-47 |
| Msa0379820 | Msa0455230 | 0.853103 | 2.981220e-61 | -8.615850e-47 |
| Msa0379820 | Msa0465680 | -0.809654 | 1.700062e-50 | -8.615850e-47 |
| Msa0379820 | Msa0467740 | -0.822883 | 1.866825e-53 | -8.615850e-47 |
| Msa0379820 | Msa0475730 | 0.879760 | 9.580167e-70 | -8.615850e-47 |
| Msa0379820 | Msa0496460 | 0.808707 | 2.712875e-50 | -8.615850e-47 |
| Msa0379820 | Msa0502910 | 0.851850 | 6.782098e-61 | -8.615850e-47 |
| Msa0379820 | Msa0514130 | -0.828231 | 1.008271e-54 | -8.615850e-47 |
| Msa0379820 | Msa0516310 | 0.809743 | 1.627473e-50 | -8.615850e-47 |
| Msa0379820 | Msa0527250 | 0.810380 | 1.186407e-50 | -8.615850e-47 |
| Msa0379820 | Msa0543900 | 0.825409 | 4.762314e-54 | -8.615850e-47 |
| Msa0379820 | Msa0544930 | 0.819891 | 9.150891e-53 | -8.615850e-47 |
| Msa0379820 | Msa0563140 | 0.801685 | 8.011252e-49 | -8.615850e-47 |
| Msa0379820 | Msa0599770 | 0.814013 | 1.912518e-51 | -8.615850e-47 |
| Msa0379820 | Msa0639030 | 0.826414 | 2.748346e-54 | -8.615850e-47 |
| Msa0379820 | Msa0640380 | 0.842604 | 2.336359e-58 | -8.615850e-47 |
| Msa0379820 | Msa0641020 | 0.831116 | 2.002929e-55 | -8.615850e-47 |
| Msa0379820 | Msa0641030 | 0.823130 | 1.634602e-53 | -8.615850e-47 |
| Msa0379820 | Msa0656270 | 0.830443 | 2.928905e-55 | -8.615850e-47 |
| Msa0379820 | Msa0663330 | 0.826249 | 3.008839e-54 | -8.615850e-47 |
| Msa0379820 | Msa0664020 | 0.831372 | 1.732667e-55 | -8.615850e-47 |
| Msa0379820 | Msa0678820 | 0.814925 | 1.202034e-51 | -8.615850e-47 |
| Msa0379820 | Msa0679560 | 0.800216 | 1.599447e-48 | -8.615850e-47 |
| Msa0379820 | Msa0697600 | 0.826351 | 2.845061e-54 | -8.615850e-47 |
| Msa0379820 | Msa0700070 | 0.827182 | 1.801897e-54 | -8.615850e-47 |
| Msa0379820 | Msa0722930 | 0.834779 | 2.459803e-56 | -8.615850e-47 |
| Msa0379820 | Msa0723140 | 0.838516 | 2.745132e-57 | -8.615850e-47 |
| Msa0379820 | Msa0733670 | -0.804486 | 2.111282e-49 | -8.615850e-47 |
| Msa0379820 | Msa0774810 | -0.810185 | 1.307192e-50 | -8.615850e-47 |
| Msa0379820 | Msa0807050 | 0.825575 | 4.349304e-54 | -8.615850e-47 |
| Msa0379820 | Msa0811940 | 0.806481 | 8.055461e-50 | -8.615850e-47 |
| Msa0379820 | Msa0819670 | 0.814478 | 1.509221e-51 | -8.615850e-47 |
| Msa0379820 | Msa0832990 | 0.826395 | 2.777230e-54 | -8.615850e-47 |
| Msa0379820 | Msa0843280 | 0.821715 | 3.484594e-53 | -8.615850e-47 |
| Msa0379820 | Msa0861560 | 0.825640 | 4.199477e-54 | -8.615850e-47 |
| Msa0379820 | Msa0883390 | 0.814563 | 1.445407e-51 | -8.615850e-47 |
| Msa0379820 | Msa0883450 | 0.801427 | 9.051985e-49 | -8.615850e-47 |
| Msa0379820 | Msa0883660 | 0.816620 | 5.034918e-52 | -8.615850e-47 |
| Msa0379820 | Msa0883670 | 0.811034 | 8.565259e-51 | -8.615850e-47 |
| Msa0379820 | Msa0900200 | 0.808195 | 3.488732e-50 | -8.615850e-47 |
| Msa0379820 | Msa0965520 | 0.814730 | 1.327525e-51 | -8.615850e-47 |
| Msa0379820 | Msa1000020 | 0.804120 | 2.515462e-49 | -8.615850e-47 |
| Msa0379820 | Msa1054410 | 0.802753 | 4.831401e-49 | -8.615850e-47 |
| Msa0379820 | Msa1071310 | 0.809013 | 2.333286e-50 | -8.615850e-47 |
| Msa0379820 | Msa1080790 | 0.865287 | 6.587042e-65 | -8.615850e-47 |
| Msa0379820 | Msa1118930 | 0.864631 | 1.058160e-64 | -8.615850e-47 |
| Msa0379820 | Msa1132950 | 0.832014 | 1.203829e-55 | -8.615850e-47 |
| Msa0379820 | Msa1141250 | -0.817626 | 2.991727e-52 | -8.615850e-47 |
| Msa0379820 | Msa1203380 | 0.802667 | 5.032080e-49 | -8.615850e-47 |
| Msa0379820 | Msa1204190 | -0.805285 | 1.437489e-49 | -8.615850e-47 |
| Msa0379820 | Msa1208340 | 0.801982 | 6.964803e-49 | -8.615850e-47 |
| Msa0379820 | Msa1211390 | 0.800633 | 1.315183e-48 | -8.615850e-47 |
| Msa0379820 | Msa1237260 | 0.820793 | 5.685913e-53 | -8.615850e-47 |
| Msa0379820 | Msa1272130 | 0.808037 | 3.769934e-50 | -8.615850e-47 |
| Msa0379820 | Msa1306700 | 0.806362 | 8.533855e-50 | -8.615850e-47 |
| Msa0379820 | Msa1309880 | 0.806897 | 6.579531e-50 | -8.615850e-47 |
| Msa0379820 | Msa1360380 | 0.800336 | 1.511796e-48 | -8.615850e-47 |
| Msa0379820 | Msa1370630 | 0.861251 | 1.170118e-63 | -8.615850e-47 |
| Msa0379820 | Msa1371580 | 0.810257 | 1.261354e-50 | -8.615850e-47 |
| Msa0379820 | Msa1377070 | 0.801353 | 9.370416e-49 | -8.615850e-47 |
| Msa0379820 | Msa1379710 | 0.808159 | 3.552514e-50 | -8.615850e-47 |
| Msa0379820 | Msa1438820 | 0.809686 | 1.674088e-50 | -8.615850e-47 |
| Msa0379820 | Msa1445250 | 0.833469 | 5.239787e-56 | -8.615850e-47 |
| Msa0243470 | Msa0379820 | 0.812367 | 4.394072e-51 | -8.615850e-47 |
| Msa0256410 | Msa0379820 | 0.810923 | 9.054226e-51 | -8.615850e-47 |
| Msa0295850 | Msa0379820 | 0.804725 | 1.882258e-49 | -8.615850e-47 |
| Msa0334170 | Msa0379820 | 0.811615 | 6.406790e-51 | -8.615850e-47 |
| Msa0362430 | Msa0379820 | 0.835370 | 1.745638e-56 | -8.615850e-47 |
| Msa0363460 | Msa0379820 | 0.849316 | 3.496526e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379820 | MtrunA17_Chr3g0132961 | 95.581 | 611 | 19 | 2 | 1 | 611 | 1 | 603 | 0.0 | 1203 |
| Msa0379820 | MtrunA17_Chr3g0132931 | 62.010 | 587 | 199 | 9 | 11 | 589 | 10 | 580 | 0.0 | 698 |
| Msa0379820 | MtrunA17_Chr5g0412241 | 57.661 | 496 | 189 | 8 | 87 | 573 | 72 | 555 | 0.0 | 571 |
| Msa0379820 | MtrunA17_Chr3g0132941 | 35.149 | 202 | 75 | 9 | 331 | 521 | 143 | 299 | 6.15e-15 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379820 | AT1G58200.2 | 54.735 | 528 | 212 | 6 | 77 | 590 | 66 | 580 | 0.0 | 571 |
| Msa0379820 | AT1G58200.1 | 54.735 | 528 | 212 | 6 | 77 | 590 | 66 | 580 | 0.0 | 571 |
| Msa0379820 | AT5G10490.1 | 49.917 | 603 | 264 | 9 | 13 | 604 | 1 | 576 | 0.0 | 560 |
| Msa0379820 | AT5G10490.3 | 51.042 | 576 | 254 | 7 | 37 | 604 | 19 | 574 | 0.0 | 555 |
| Msa0379820 | AT5G10490.2 | 53.510 | 527 | 228 | 5 | 78 | 604 | 39 | 548 | 0.0 | 554 |
| Msa0379820 | AT4G00290.1 | 25.957 | 235 | 151 | 7 | 240 | 471 | 276 | 490 | 3.89e-11 | 66.2 |
Find 151 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTAGATGATAACAAAATT+TGG | 0.123396 | 3_1:+81216142 | None:intergenic |
| CACAATTTATGTGCATAATA+TGG | 0.134816 | 3_1:+81215864 | None:intergenic |
| TAAAATTCAGTTGCAAAATT+TGG | 0.150816 | 3_1:-81221804 | Msa0379820:five_prime_UTR |
| TGCTGCCGTGTCATTGTTTA+TGG | 0.178720 | 3_1:-81218854 | Msa0379820:CDS |
| ATCCCCGCTCTTGGTATAAT+TGG | 0.180696 | 3_1:-81220088 | Msa0379820:CDS |
| TGCTCTCGAACGAGTGAAAA+TGG | 0.182392 | 3_1:+81216443 | None:intergenic |
| ATAATTGGCTTTGCTATCTT+TGG | 0.188913 | 3_1:-81220073 | Msa0379820:CDS |
| ATTAAAGGATATGAGGTTTC+TGG | 0.198213 | 3_1:-81218504 | Msa0379820:CDS |
| CATAATCGATTACCGGAATT+AGG | 0.223045 | 3_1:+81221293 | None:intergenic |
| GCAACCTTTGCATATATAAA+TGG | 0.224580 | 3_1:-81215938 | Msa0379820:three_prime_UTR |
| TGTGAGTGCTCTTGGTTTAA+TGG | 0.244095 | 3_1:-81218181 | Msa0379820:intron |
| CAACCTTTGCTGCTGTGGAC+TGG | 0.249892 | 3_1:-81219859 | Msa0379820:CDS |
| AACCTCTCCTACGCCGTTGC+AGG | 0.261064 | 3_1:-81220045 | Msa0379820:CDS |
| ATTAGATGATAACAAAATTT+GGG | 0.273692 | 3_1:+81216143 | None:intergenic |
| GGGTGATGTTTCTGATTTAG+AGG | 0.275710 | 3_1:+81216164 | None:intergenic |
| AGATTCAGAGGCTAAATTTC+GGG | 0.275982 | 3_1:+81216209 | None:intergenic |
| GGGATTAATTGAAGCATAAT+TGG | 0.279859 | 3_1:+81220106 | None:intergenic |
| GTTGAAGGCTTAGCTTTATA+AGG | 0.287270 | 3_1:+81216387 | None:intergenic |
| AGCTGATATGCGCAAGGTTT+TGG | 0.287823 | 3_1:-81218068 | Msa0379820:CDS |
| CATAATATGGGTAATCAGTT+AGG | 0.296725 | 3_1:+81215877 | None:intergenic |
| ACAGTATTGCTTTCACTTGC+AGG | 0.308252 | 3_1:-81218781 | Msa0379820:CDS |
| TTCGATTGTCTCATGACTTT+AGG | 0.319511 | 3_1:-81221446 | Msa0379820:CDS |
| AGGCAATACATTAGTAATAC+TGG | 0.324900 | 3_1:-81221426 | Msa0379820:CDS |
| AACCTTTGCTGCTGTGGACT+GGG | 0.325778 | 3_1:-81219858 | Msa0379820:CDS |
| ATTCGTGAAACCTTGATAAC+TGG | 0.330316 | 3_1:-81216327 | Msa0379820:CDS |
| TATCAAGGTTTCACGAATCT+TGG | 0.330485 | 3_1:+81216332 | None:intergenic |
| CGGATTAAAACAAAGATTAA+AGG | 0.332484 | 3_1:-81218519 | Msa0379820:CDS |
| TCCAGAAAATCAAGCTCTTA+TGG | 0.340918 | 3_1:-81217984 | Msa0379820:intron |
| AATTCTACAATGACATATTC+AGG | 0.347346 | 3_1:-81221474 | Msa0379820:CDS |
| ATAGTAGTTGATTGAGTTGA+AGG | 0.349386 | 3_1:+81216372 | None:intergenic |
| GATTTAGAGGCCTTCTGAAC+TGG | 0.357096 | 3_1:+81216177 | None:intergenic |
| AAGCTGTATATACTGCAGTA+TGG | 0.361800 | 3_1:-81218879 | Msa0379820:CDS |
| GTGGTTGGCTGCTGGTGGTA+TGG | 0.365271 | 3_1:-81218806 | Msa0379820:CDS |
| ACTAGAGTTAGAACTCAAAT+TGG | 0.367139 | 3_1:-81215904 | Msa0379820:three_prime_UTR |
| TCTCTCTCCAACAGTATCTA+AGG | 0.371637 | 3_1:-81221676 | Msa0379820:intron |
| GTCATTGTTTATGGAGTTGT+TGG | 0.376702 | 3_1:-81218845 | Msa0379820:CDS |
| CTTATGTCAAGCTGGGTCTA+TGG | 0.377770 | 3_1:-81215985 | Msa0379820:three_prime_UTR |
| AAGATTCAGAGGCTAAATTT+CGG | 0.378425 | 3_1:+81216208 | None:intergenic |
| AGCAGCCGTTGCTTTAAAAT+CGG | 0.381438 | 3_1:+81219699 | None:intergenic |
| ATGTTGACTTTAACTTATCC+TGG | 0.383411 | 3_1:+81216244 | None:intergenic |
| AACAAAGATTAAAGGATATG+AGG | 0.385214 | 3_1:-81218511 | Msa0379820:CDS |
| GTGAAAATGGGGTCGTCAAA+TGG | 0.395728 | 3_1:+81216456 | None:intergenic |
| ACAATTTATGTGCATAATAT+GGG | 0.395988 | 3_1:+81215865 | None:intergenic |
| TTCACACTCAACTTGTGATT+AGG | 0.403461 | 3_1:+81218288 | None:intergenic |
| CAATCATCCACGGCATGGTT+TGG | 0.405653 | 3_1:-81221258 | Msa0379820:intron |
| TGGTTGGCTGCTGGTGGTAT+GGG | 0.409781 | 3_1:-81218805 | Msa0379820:CDS |
| CTGGGGTAATGCTGCTCTGC+AGG | 0.412173 | 3_1:-81219840 | Msa0379820:intron |
| AGGTCATGTAATGCTATATC+AGG | 0.416426 | 3_1:-81220133 | Msa0379820:CDS |
| ATCTTTGAAACCAGTTATCA+AGG | 0.419330 | 3_1:+81216317 | None:intergenic |
| GTTTAATGCGTGTAATAAAC+AGG | 0.422934 | 3_1:+81215793 | None:intergenic |
| GCTCTCGAACGAGTGAAAAT+GGG | 0.423150 | 3_1:+81216444 | None:intergenic |
| AACAAAACATTACATCTAGA+AGG | 0.427497 | 3_1:+81221054 | None:intergenic |
| CATTTGCCTACTGTTCTTCA+AGG | 0.430153 | 3_1:-81219644 | Msa0379820:intron |
| CAGATGAGCATTGATCTTAT+CGG | 0.431050 | 3_1:-81218904 | Msa0379820:CDS |
| ATCCGCTCATTCACAACAAA+TGG | 0.433039 | 3_1:+81218537 | None:intergenic |
| CGGTCTGCCTTGGTACCGGC+TGG | 0.433778 | 3_1:-81221027 | Msa0379820:CDS |
| ACAAGCACAAAATTTCTGTA+TGG | 0.446067 | 3_1:-81219204 | Msa0379820:CDS |
| ATAACTGGTTTCAAAGATGA+AGG | 0.457024 | 3_1:-81216312 | Msa0379820:CDS |
| TTCAGTGGAACGATAAAAGT+TGG | 0.457315 | 3_1:-81219921 | Msa0379820:intron |
| TTATAAGGTGAATTTGTGAA+TGG | 0.457800 | 3_1:+81216402 | None:intergenic |
| GACAAAACATAATCGATTAC+CGG | 0.463499 | 3_1:+81221286 | None:intergenic |
| TATAAGGTGAATTTGTGAAT+GGG | 0.464354 | 3_1:+81216403 | None:intergenic |
| TGTTGACAGAAACCTAATTC+CGG | 0.464569 | 3_1:-81221305 | Msa0379820:intron |
| AGATGAGCATTGATCTTATC+GGG | 0.466557 | 3_1:-81218903 | Msa0379820:CDS |
| TTCACTCGTTCGAGAGCAAA+GGG | 0.468144 | 3_1:-81216438 | Msa0379820:CDS |
| CTTATCCTGGGACTTTACAC+TGG | 0.468864 | 3_1:+81216257 | None:intergenic |
| ACCATGCCGTGGATGATTGA+AGG | 0.469094 | 3_1:+81221262 | None:intergenic |
| AAGATTGATGTGAGTGCTCT+TGG | 0.470797 | 3_1:-81218189 | Msa0379820:CDS |
| TGAAGAGTATCTCCGTGTTA+AGG | 0.473513 | 3_1:-81217223 | Msa0379820:intron |
| CTTGCGCATATCAGCTATGA+TGG | 0.477938 | 3_1:+81218075 | None:intergenic |
| GCACAGAAGTGGTTGGCTGC+TGG | 0.483881 | 3_1:-81218814 | Msa0379820:CDS |
| TGGTCACCAACAGTAGTTAG+AGG | 0.488933 | 3_1:-81218336 | Msa0379820:CDS |
| AAAACAGGAGGCCATTCTCT+TGG | 0.492432 | 3_1:-81216574 | Msa0379820:intron |
| GGTCTATGGAATGGTTCGGT+TGG | 0.498185 | 3_1:-81215971 | Msa0379820:three_prime_UTR |
| CTTAGAGTCATCAGTCATCA+TGG | 0.504609 | 3_1:-81216546 | Msa0379820:CDS |
| CCCTAGCTGATTAGCCATTG+AGG | 0.504678 | 3_1:-81216027 | Msa0379820:three_prime_UTR |
| CCCTCAATGGCTAATCAGCT+AGG | 0.508055 | 3_1:+81216026 | None:intergenic |
| CCTAGCTGATTAGCCATTGA+GGG | 0.510490 | 3_1:-81216026 | Msa0379820:three_prime_UTR |
| CTGAATTGTGCGGATGGGTG+TGG | 0.513236 | 3_1:+81216512 | None:intergenic |
| GCTGGGTCTATGGAATGGTT+CGG | 0.514432 | 3_1:-81215975 | Msa0379820:three_prime_UTR |
| GTGTCGGTCTGCCTTGGTAC+CGG | 0.515358 | 3_1:-81221031 | Msa0379820:CDS |
| TTTGTTGTGTCGGTCTGCCT+TGG | 0.519884 | 3_1:-81221037 | Msa0379820:CDS |
| CTTCAATTAATCCCCGCTCT+TGG | 0.524426 | 3_1:-81220097 | Msa0379820:CDS |
| ATAATATGGGTAATCAGTTA+GGG | 0.524874 | 3_1:+81215878 | None:intergenic |
| TTATCAAGCTTATGTCAAGC+TGG | 0.526521 | 3_1:-81215993 | Msa0379820:three_prime_UTR |
| TCATTGTTTATGGAGTTGTT+GGG | 0.529134 | 3_1:-81218844 | Msa0379820:CDS |
| AAGCCAATTATACCAAGAGC+GGG | 0.529821 | 3_1:+81220085 | None:intergenic |
| TGTTGACTTTAACTTATCCT+GGG | 0.529999 | 3_1:+81216245 | None:intergenic |
| CTGGGACTTTACACTGGATG+AGG | 0.533658 | 3_1:+81216263 | None:intergenic |
| TTTCACTCGTTCGAGAGCAA+AGG | 0.537364 | 3_1:-81216439 | Msa0379820:CDS |
| AAACATGCCTTAGATACTGT+TGG | 0.537438 | 3_1:+81221669 | None:intergenic |
| CATATTATGCACATAAATTG+TGG | 0.537790 | 3_1:-81215863 | Msa0379820:three_prime_UTR |
| CTCATCCAGTGTAAAGTCCC+AGG | 0.537833 | 3_1:-81216262 | Msa0379820:CDS |
| AATCTACCTTGAAGAACAGT+AGG | 0.538559 | 3_1:+81219638 | None:intergenic |
| CATGAATCATCACACTTGAA+AGG | 0.538831 | 3_1:+81218568 | None:intergenic |
| AGCTGTATATACTGCAGTAT+GGG | 0.539129 | 3_1:-81218878 | Msa0379820:CDS |
| TAATACTAGACTGCCCTCAA+TGG | 0.540488 | 3_1:+81216013 | None:intergenic |
| CCGTTGCTTTAAAATCGGAC+TGG | 0.548639 | 3_1:+81219704 | None:intergenic |
| ACCTCTCCTACGCCGTTGCA+GGG | 0.550012 | 3_1:-81220044 | Msa0379820:CDS |
| TCAACCATTTATATATGCAA+AGG | 0.550765 | 3_1:+81215934 | None:intergenic |
| TGAGGTTTCTGGTAGAGTTG+AGG | 0.552626 | 3_1:-81218493 | Msa0379820:intron |
| ATCTTAGTAAGAAAACTCAT+TGG | 0.552673 | 3_1:-81218254 | Msa0379820:CDS |
| TTCTGATAATCCAGTTCAGA+AGG | 0.553518 | 3_1:-81216187 | Msa0379820:CDS |
| GCCTTCAATCATCCACGGCA+TGG | 0.556075 | 3_1:-81221263 | Msa0379820:CDS |
| TAGAAGGTACAGGCTTATGT+TGG | 0.558063 | 3_1:+81221070 | None:intergenic |
| TGGCTACTGTTTCGTTGTCA+AGG | 0.558304 | 3_1:-81220978 | Msa0379820:intron |
| TTGTCGCCTTCAATCATCCA+CGG | 0.558946 | 3_1:-81221268 | Msa0379820:CDS |
| CATCTTCTGAATTGTGCGGA+TGG | 0.559810 | 3_1:+81216506 | None:intergenic |
| GTCAAGCTGGGTCTATGGAA+TGG | 0.560919 | 3_1:-81215980 | Msa0379820:three_prime_UTR |
| GGCCATTTGTTGTGAATGAG+CGG | 0.561264 | 3_1:-81218539 | Msa0379820:CDS |
| TCAGCACCTCTAACTACTGT+TGG | 0.561707 | 3_1:+81218330 | None:intergenic |
| ACCTTTGCTGCTGTGGACTG+GGG | 0.562252 | 3_1:-81219857 | Msa0379820:CDS |
| GGATGAGGGCGTCCATGTTG+CGG | 0.563662 | 3_1:+81216278 | None:intergenic |
| TCTAAGAAGATCCAAGAGAA+TGG | 0.567023 | 3_1:+81216563 | None:intergenic |
| TGGGTCTCTCCGCACAGAAG+TGG | 0.571017 | 3_1:-81218825 | Msa0379820:CDS |
| GGTACCGGCTGGAGCGTGTG+AGG | 0.573244 | 3_1:-81221016 | Msa0379820:CDS |
| TATCAAGCTTATGTCAAGCT+GGG | 0.575502 | 3_1:-81215992 | Msa0379820:three_prime_UTR |
| TCTCTCCGCACAGAAGTGGT+TGG | 0.580196 | 3_1:-81218821 | Msa0379820:CDS |
| TGAGGCTCCGCTGTTGAAAG+TGG | 0.580679 | 3_1:-81220998 | Msa0379820:CDS |
| ATCTTCTGAATTGTGCGGAT+GGG | 0.581018 | 3_1:+81216507 | None:intergenic |
| ATAGAGCCCTGCAACGGCGT+AGG | 0.581176 | 3_1:+81220038 | None:intergenic |
| CTCTCGAACGAGTGAAAATG+GGG | 0.581916 | 3_1:+81216445 | None:intergenic |
| GCCCTGCAACGGCGTAGGAG+AGG | 0.582945 | 3_1:+81220043 | None:intergenic |
| TCACCTTGCTATCAGTCACT+TGG | 0.584498 | 3_1:-81218220 | Msa0379820:CDS |
| ACATTACATCTAGAAGGTAC+AGG | 0.584956 | 3_1:+81221060 | None:intergenic |
| ACCCCAGTCCACAGCAGCAA+AGG | 0.591276 | 3_1:+81219856 | None:intergenic |
| AATTTGTGAATGGGAAAGAG+TGG | 0.592121 | 3_1:+81216412 | None:intergenic |
| CATCCAAGTGACTGATAGCA+AGG | 0.593216 | 3_1:+81218217 | None:intergenic |
| CCTCAATGGCTAATCAGCTA+GGG | 0.595650 | 3_1:+81216027 | None:intergenic |
| GGAGCCTCACACGCTCCAGC+CGG | 0.596349 | 3_1:+81221012 | None:intergenic |
| TCATCAGTCATCATGGAGCT+CGG | 0.597209 | 3_1:-81216539 | Msa0379820:CDS |
| GCTTTCACTTGCAGGTCGTG+AGG | 0.598539 | 3_1:-81218773 | Msa0379820:intron |
| TTCTGTAGCATGTAGGATGG+TGG | 0.601690 | 3_1:-81218356 | Msa0379820:intron |
| GTGTGATGATTCATGCAACT+CGG | 0.610555 | 3_1:-81218560 | Msa0379820:CDS |
| TTAGATGATAACAAAATTTG+GGG | 0.623288 | 3_1:+81216144 | None:intergenic |
| TGGATTATCAGAAGATTCAG+AGG | 0.623721 | 3_1:+81216197 | None:intergenic |
| ACACGCTCCAGCCGGTACCA+AGG | 0.634927 | 3_1:+81221020 | None:intergenic |
| CATCATAGCTGATATGCGCA+AGG | 0.643564 | 3_1:-81218074 | Msa0379820:CDS |
| CAGAAGTGGTTGGCTGCTGG+TGG | 0.645748 | 3_1:-81218811 | Msa0379820:CDS |
| CAACTCCATAAACAATGACA+CGG | 0.645901 | 3_1:+81218849 | None:intergenic |
| AAAGCCAATTATACCAAGAG+CGG | 0.646228 | 3_1:+81220084 | None:intergenic |
| ACAGTAGGCAAATGTAAGCA+CGG | 0.647849 | 3_1:+81219653 | None:intergenic |
| GGAGAAATAGAGCCCTGCAA+CGG | 0.655517 | 3_1:+81220032 | None:intergenic |
| AGACATACCAAACCATGCCG+TGG | 0.659701 | 3_1:+81221251 | None:intergenic |
| TGGGACTTTACACTGGATGA+GGG | 0.659785 | 3_1:+81216264 | None:intergenic |
| AATCTAGTCTCACCTTAACA+CGG | 0.682332 | 3_1:+81217211 | None:intergenic |
| AGCAGCCAACCACTTCTGTG+CGG | 0.694661 | 3_1:+81218816 | None:intergenic |
| TGTACATCTTCTGAATTGTG+CGG | 0.699375 | 3_1:+81216502 | None:intergenic |
| AGCCAATTATACCAAGAGCG+GGG | 0.701628 | 3_1:+81220086 | None:intergenic |
| ACAGTAGCCACTTTCAACAG+CGG | 0.712676 | 3_1:+81220991 | None:intergenic |
| AGTTGAGTGTGAATGTTGTG+AGG | 0.723498 | 3_1:-81218278 | Msa0379820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGAATAATTTTCAAAAAAT+AGG | + | chr3_1:81217000-81217019 | None:intergenic | 10.0% |
| !! | ACACAAAAATAAATAAAAAA+GGG | - | chr3_1:81218121-81218140 | Msa0379820:intron | 10.0% |
| !!! | TACTATCATTATTTTTTATT+TGG | - | chr3_1:81218215-81218234 | Msa0379820:CDS | 10.0% |
| !!! | TAACATTTTTCTAAAATAAT+GGG | - | chr3_1:81218512-81218531 | Msa0379820:CDS | 10.0% |
| !!! | TATTTTTATATCACTTAAAA+TGG | + | chr3_1:81219213-81219232 | None:intergenic | 10.0% |
| !!! | TTTTTTGTAAACATAAAAAT+TGG | + | chr3_1:81220579-81220598 | None:intergenic | 10.0% |
| !! | ATATATATAGTTGTCAAAAA+TGG | + | chr3_1:81216020-81216039 | None:intergenic | 15.0% |
| !! | TGAATAAAATTAAAACAGAA+GGG | + | chr3_1:81216054-81216073 | None:intergenic | 15.0% |
| !! | ATGAATAAAATTAAAACAGA+AGG | + | chr3_1:81216055-81216074 | None:intergenic | 15.0% |
| !!! | ATTTACTTCTGAATATTTTA+TGG | - | chr3_1:81216457-81216476 | Msa0379820:CDS | 15.0% |
| !! | TTGTTAGAATTAATGTAAAT+TGG | - | chr3_1:81216719-81216738 | Msa0379820:intron | 15.0% |
| !!! | CATAATTTAATTTAGAGTTT+CGG | + | chr3_1:81217306-81217325 | None:intergenic | 15.0% |
| !!! | TTATATTTTGAAATTGATGT+AGG | - | chr3_1:81217462-81217481 | Msa0379820:intron | 15.0% |
| !! | CACACAAAAATAAATAAAAA+AGG | - | chr3_1:81218120-81218139 | Msa0379820:intron | 15.0% |
| !!! | GTAACATTTTTCTAAAATAA+TGG | - | chr3_1:81218511-81218530 | Msa0379820:CDS | 15.0% |
| !!! | AATAATCCTATATATTTTAC+AGG | + | chr3_1:81218613-81218632 | None:intergenic | 15.0% |
| !!! | TTTTGTCATTTACTTTTTTA+TGG | - | chr3_1:81218917-81218936 | Msa0379820:intron | 15.0% |
| !! | ATGGTATTTAAAAAATTTAC+TGG | - | chr3_1:81219453-81219472 | Msa0379820:intron | 15.0% |
| !! | TGGTATTTAAAAAATTTACT+GGG | - | chr3_1:81219454-81219473 | Msa0379820:intron | 15.0% |
| !!! | CATTTATTTCATTAACATTT+TGG | - | chr3_1:81220207-81220226 | Msa0379820:intron | 15.0% |
| !! | AAAAAGTAAAAAGTAAATCT+TGG | + | chr3_1:81220633-81220652 | None:intergenic | 15.0% |
| !! | AATTGTTTCATCATAAAATA+TGG | - | chr3_1:81220928-81220947 | Msa0379820:intron | 15.0% |
| !! | ATTAGATGATAACAAAATTT+GGG | + | chr3_1:81221475-81221494 | None:intergenic | 15.0% |
| !! | TAAAATTCAGTTGCAAAATT+TGG | - | chr3_1:81215811-81215830 | Msa0379820:three_prime_UTR | 20.0% |
| !! | TAATGTAAATTGGACAATTA+TGG | - | chr3_1:81216729-81216748 | Msa0379820:intron | 20.0% |
| !! | GTGTAATTATTATGGTAATT+AGG | - | chr3_1:81216761-81216780 | Msa0379820:intron | 20.0% |
| !! | TATTGTATTTAGGAATTAGT+AGG | + | chr3_1:81217429-81217448 | None:intergenic | 20.0% |
| !! | AAAATTAGATACTAACTTCT+TGG | + | chr3_1:81217607-81217626 | None:intergenic | 20.0% |
| !! | AATAAGCTTATCTTACAATT+AGG | + | chr3_1:81218069-81218088 | None:intergenic | 20.0% |
| !! | CAAAAATAAATAAAAAAGGG+AGG | - | chr3_1:81218124-81218143 | Msa0379820:intron | 20.0% |
| !! | AATTATCTAACTTACTGAAA+AGG | - | chr3_1:81219153-81219172 | Msa0379820:intron | 20.0% |
| !!! | GTGATATAAAAATAGTTTTC+TGG | - | chr3_1:81219219-81219238 | Msa0379820:intron | 20.0% |
| !!! | AATTTTTTTTGTTCTACTAG+AGG | + | chr3_1:81219581-81219600 | None:intergenic | 20.0% |
| !! | ATAAACCAATTAACAGAAAA+AGG | + | chr3_1:81219663-81219682 | None:intergenic | 20.0% |
| !! | TTGTCAAATTATACTATGAT+AGG | - | chr3_1:81220100-81220119 | Msa0379820:CDS | 20.0% |
| !! | TAAAAATTGGTGAAAAATTG+AGG | + | chr3_1:81220566-81220585 | None:intergenic | 20.0% |
| !! | CACATAATAGCTTATTATAT+AGG | - | chr3_1:81220716-81220735 | Msa0379820:intron | 20.0% |
| !!! | TATATTCAAGTCATTTTGTT+CGG | - | chr3_1:81220967-81220986 | Msa0379820:intron | 20.0% |
| !! | TTAGATGATAACAAAATTTG+GGG | + | chr3_1:81221474-81221493 | None:intergenic | 20.0% |
| !! | CATTAGATGATAACAAAATT+TGG | + | chr3_1:81221476-81221495 | None:intergenic | 20.0% |
| !! | ACAATTTATGTGCATAATAT+GGG | + | chr3_1:81221753-81221772 | None:intergenic | 20.0% |
| ! | ATTCAAAACTGCAAAAAAAC+TGG | + | chr3_1:81215983-81216002 | None:intergenic | 25.0% |
| ! | AATTCTACAATGACATATTC+AGG | - | chr3_1:81216141-81216160 | Msa0379820:CDS | 25.0% |
| ! | AACAAAACATTACATCTAGA+AGG | + | chr3_1:81216564-81216583 | None:intergenic | 25.0% |
| !!! | ATTTTATTGCATGATGGAAA+AGG | + | chr3_1:81216875-81216894 | None:intergenic | 25.0% |
| ! | TTTCCATCATGCAATAAAAT+TGG | - | chr3_1:81216875-81216894 | Msa0379820:intron | 25.0% |
| !! | AAACCAATTTTATTGCATGA+TGG | + | chr3_1:81216881-81216900 | None:intergenic | 25.0% |
| !!! | TGCAATAAAATTGGTTTGTT+TGG | - | chr3_1:81216884-81216903 | Msa0379820:intron | 25.0% |
| ! | GAAAATTATTCTACTTGCAA+TGG | - | chr3_1:81217007-81217026 | Msa0379820:intron | 25.0% |
| !! | TATTTTCTTGAGATTTGTGT+CGG | - | chr3_1:81217184-81217203 | Msa0379820:intron | 25.0% |
| ! | GCATCAAATGATATGATTTA+TGG | + | chr3_1:81217365-81217384 | None:intergenic | 25.0% |
| ! | CCTTCATAGATATTGTATTT+AGG | + | chr3_1:81217439-81217458 | None:intergenic | 25.0% |
| ! | CCTAAATACAATATCTATGA+AGG | - | chr3_1:81217436-81217455 | Msa0379820:intron | 25.0% |
| !!! | TTGATAACATATGTTTTCAG+TGG | - | chr3_1:81217679-81217698 | Msa0379820:intron | 25.0% |
| !! | GGAATAAAAAAGTATAGACA+CGG | - | chr3_1:81218145-81218164 | Msa0379820:intron | 25.0% |
| !!! | AACACATAATAGTAATGGAT+GGG | + | chr3_1:81218330-81218349 | None:intergenic | 25.0% |
| !! | AAACACATAATAGTAATGGA+TGG | + | chr3_1:81218331-81218350 | None:intergenic | 25.0% |
| ! | CTTCAAACACATAATAGTAA+TGG | + | chr3_1:81218335-81218354 | None:intergenic | 25.0% |
| !! | TACTTTTCTTTCATTGTTGT+CGG | + | chr3_1:81218446-81218465 | None:intergenic | 25.0% |
| ! | CTACTATTCTAATCTTCATT+TGG | + | chr3_1:81218586-81218605 | None:intergenic | 25.0% |
| ! | AGTCAACCTGTAAAATATAT+AGG | - | chr3_1:81218604-81218623 | Msa0379820:intron | 25.0% |
| ! | TTTCCACAATGTTAATTATG+AGG | - | chr3_1:81218632-81218651 | Msa0379820:intron | 25.0% |
| ! | TTCCACAATGTTAATTATGA+GGG | - | chr3_1:81218633-81218652 | Msa0379820:intron | 25.0% |
| !!! | AGAAAGTATCAACTATCAAA+GGG | + | chr3_1:81218878-81218897 | None:intergenic | 25.0% |
| !!! | TAGAAAGTATCAACTATCAA+AGG | + | chr3_1:81218879-81218898 | None:intergenic | 25.0% |
| ! | CGGATTAAAACAAAGATTAA+AGG | - | chr3_1:81219096-81219115 | Msa0379820:intron | 25.0% |
| ! | AACAAAGATTAAAGGATATG+AGG | - | chr3_1:81219104-81219123 | Msa0379820:intron | 25.0% |
| ! | ATCTTAGTAAGAAAACTCAT+TGG | - | chr3_1:81219361-81219380 | Msa0379820:intron | 25.0% |
| ! | AACAAAAAAAATTGCACAGA+AGG | - | chr3_1:81219588-81219607 | Msa0379820:intron | 25.0% |
| ! | ACAAAAAAAATTGCACAGAA+GGG | - | chr3_1:81219589-81219608 | Msa0379820:intron | 25.0% |
| !! | TGATACCTTTTTCTGTTAAT+TGG | - | chr3_1:81219655-81219674 | Msa0379820:CDS | 25.0% |
| ! | CCTAGTAAAAAATTCTACAA+AGG | + | chr3_1:81219887-81219906 | None:intergenic | 25.0% |
| !!! | CCTTTGTAGAATTTTTTACT+AGG | - | chr3_1:81219884-81219903 | Msa0379820:CDS | 25.0% |
| !! | GTATAATTTGACAACCATTT+TGG | + | chr3_1:81220094-81220113 | None:intergenic | 25.0% |
| ! | CCAATGATTGATAAATTACT+AGG | + | chr3_1:81220149-81220168 | None:intergenic | 25.0% |
| ! | CCTAGTAATTTATCAATCAT+TGG | - | chr3_1:81220146-81220165 | Msa0379820:intron | 25.0% |
| ! | TAATATCTGCAACAGAAAAA+GGG | + | chr3_1:81220343-81220362 | None:intergenic | 25.0% |
| ! | TTTCTTCTTCAAATTACTCT+CGG | - | chr3_1:81220653-81220672 | Msa0379820:intron | 25.0% |
| ! | CTTATTATATAGGCTGATAT+CGG | - | chr3_1:81220726-81220745 | Msa0379820:intron | 25.0% |
| ! | TTTAAGCTACACAATATTTC+TGG | + | chr3_1:81220809-81220828 | None:intergenic | 25.0% |
| ! | TAATTTCCATGTGATAAAAC+AGG | - | chr3_1:81221026-81221045 | Msa0379820:CDS | 25.0% |
| ! | TATAAGGTGAATTTGTGAAT+GGG | + | chr3_1:81221215-81221234 | None:intergenic | 25.0% |
| ! | TTATAAGGTGAATTTGTGAA+TGG | + | chr3_1:81221216-81221235 | None:intergenic | 25.0% |
| !!! | TTTTTTTCATCTTGCTTTGA+TGG | + | chr3_1:81221507-81221526 | None:intergenic | 25.0% |
| ! | TCAACCATTTATATATGCAA+AGG | + | chr3_1:81221684-81221703 | None:intergenic | 25.0% |
| ! | ATAATATGGGTAATCAGTTA+GGG | + | chr3_1:81221740-81221759 | None:intergenic | 25.0% |
| ! | CACAATTTATGTGCATAATA+TGG | + | chr3_1:81221754-81221773 | None:intergenic | 25.0% |
| ! | CATATTATGCACATAAATTG+TGG | - | chr3_1:81221752-81221771 | Msa0379820:five_prime_UTR | 25.0% |
| ! | TTTTCTTTCTCCAATATCCT+CGG | - | chr3_1:81215894-81215913 | Msa0379820:three_prime_UTR | 30.0% |
| AGGCAATACATTAGTAATAC+TGG | - | chr3_1:81216189-81216208 | Msa0379820:CDS | 30.0% | |
| GACAAAACATAATCGATTAC+CGG | + | chr3_1:81216332-81216351 | None:intergenic | 30.0% | |
| CTTTGTGAATTGACAGAATA+TGG | - | chr3_1:81216488-81216507 | Msa0379820:CDS | 30.0% | |
| !! | GATGTAATGTTTTGTTGTGT+CGG | - | chr3_1:81216568-81216587 | Msa0379820:CDS | 30.0% |
| TAAATTGGACAATTATGGAC+TGG | - | chr3_1:81216734-81216753 | Msa0379820:intron | 30.0% | |
| GGTTATGACTTATGATTGAA+AGG | - | chr3_1:81217028-81217047 | Msa0379820:intron | 30.0% | |
| AGATAGCTAATTGTGTACAA+TGG | + | chr3_1:81217097-81217116 | None:intergenic | 30.0% | |
| ! | ATTTTCTTGAGATTTGTGTC+GGG | - | chr3_1:81217185-81217204 | Msa0379820:intron | 30.0% |
| CTAAAAGGAAAACCAAAGTT+TGG | + | chr3_1:81217229-81217248 | None:intergenic | 30.0% | |
| !!! | CAAACTTTGGTTTTCCTTTT+AGG | - | chr3_1:81217227-81217246 | Msa0379820:CDS | 30.0% |
| ! | TTTAATTTAGAGTTTCGGTG+CGG | + | chr3_1:81217301-81217320 | None:intergenic | 30.0% |
| GGGATTAATTGAAGCATAAT+TGG | + | chr3_1:81217512-81217531 | None:intergenic | 30.0% | |
| !! | ATAATTGGCTTTGCTATCTT+TGG | - | chr3_1:81217542-81217561 | Msa0379820:intron | 30.0% |
| ACAAGCACAAAATTTCTGTA+TGG | - | chr3_1:81218411-81218430 | Msa0379820:intron | 30.0% | |
| ACATGGCAAAGATATGTAAA+AGG | + | chr3_1:81218473-81218492 | None:intergenic | 30.0% | |
| !! | AACTCATCTAAAGCTTTAAG+TGG | + | chr3_1:81218555-81218574 | None:intergenic | 30.0% |
| TCATTGTTTATGGAGTTGTT+GGG | - | chr3_1:81218771-81218790 | Msa0379820:intron | 30.0% | |
| ATTAAAGGATATGAGGTTTC+TGG | - | chr3_1:81219111-81219130 | Msa0379820:intron | 30.0% | |
| ! | TCATATTTTCTGTAGCATGT+AGG | - | chr3_1:81219252-81219271 | Msa0379820:intron | 30.0% |
| ! | AATTTACTGGGATTTTCTGA+TGG | - | chr3_1:81219466-81219485 | Msa0379820:intron | 30.0% |
| ! | TTGTTCTACTAGAGGATTTT+TGG | + | chr3_1:81219573-81219592 | None:intergenic | 30.0% |
| AAGGGAAGAAAATAAGATAC+TGG | + | chr3_1:81219711-81219730 | None:intergenic | 30.0% | |
| TTAGAAACCTGATTCAACTA+CGG | + | chr3_1:81219951-81219970 | None:intergenic | 30.0% | |
| ATAACTCTGACTAAAGTCAA+AGG | - | chr3_1:81219970-81219989 | Msa0379820:intron | 30.0% | |
| ! | AAAAGCTTTTGTAAGCATTC+TGG | + | chr3_1:81220047-81220066 | None:intergenic | 30.0% |
| TCATCTGTTTCATTCCAAAA+TGG | - | chr3_1:81220077-81220096 | Msa0379820:CDS | 30.0% | |
| ATCAATCATTGGAATCTGAT+TGG | - | chr3_1:81220157-81220176 | Msa0379820:intron | 30.0% | |
| AGTAGAGCAGAAAGATAATA+GGG | + | chr3_1:81220256-81220275 | None:intergenic | 30.0% | |
| AAGTAGAGCAGAAAGATAAT+AGG | + | chr3_1:81220257-81220276 | None:intergenic | 30.0% | |
| CTAATATCTGCAACAGAAAA+AGG | + | chr3_1:81220344-81220363 | None:intergenic | 30.0% | |
| !!! | CTTGTTGCTTTTGTACATTT+TGG | - | chr3_1:81220761-81220780 | Msa0379820:intron | 30.0% |
| ! | TTTTGTTCGGTTAACTGTTA+AGG | - | chr3_1:81220980-81220999 | Msa0379820:CDS | 30.0% |
| TTTGTTCGGTTAACTGTTAA+GGG | - | chr3_1:81220981-81221000 | Msa0379820:CDS | 30.0% | |
| !! | ATAGTAGTTGATTGAGTTGA+AGG | + | chr3_1:81221246-81221265 | None:intergenic | 30.0% |
| !! | ATCTTTGAAACCAGTTATCA+AGG | + | chr3_1:81221301-81221320 | None:intergenic | 30.0% |
| ! | ATAACTGGTTTCAAAGATGA+AGG | - | chr3_1:81221303-81221322 | Msa0379820:intron | 30.0% |
| !! | TGTTGACTTTAACTTATCCT+GGG | + | chr3_1:81221373-81221392 | None:intergenic | 30.0% |
| !! | ATGTTGACTTTAACTTATCC+TGG | + | chr3_1:81221374-81221393 | None:intergenic | 30.0% |
| AAGATTCAGAGGCTAAATTT+CGG | + | chr3_1:81221410-81221429 | None:intergenic | 30.0% | |
| GCAACCTTTGCATATATAAA+TGG | - | chr3_1:81221677-81221696 | Msa0379820:five_prime_UTR | 30.0% | |
| ACTAGAGTTAGAACTCAAAT+TGG | - | chr3_1:81221711-81221730 | Msa0379820:five_prime_UTR | 30.0% | |
| CATAATATGGGTAATCAGTT+AGG | + | chr3_1:81221741-81221760 | None:intergenic | 30.0% | |
| GTTTAATGCGTGTAATAAAC+AGG | + | chr3_1:81221825-81221844 | None:intergenic | 30.0% | |
| ! | GTTTTGCGCTGTTTGTAAAT+TGG | - | chr3_1:81215833-81215852 | Msa0379820:three_prime_UTR | 35.0% |
| ! | GATTCTTTTTCCGAGGATAT+TGG | + | chr3_1:81215907-81215926 | None:intergenic | 35.0% |
| ! | GATGTTTGATTCTTTTTCCG+AGG | + | chr3_1:81215914-81215933 | None:intergenic | 35.0% |
| AAACATGCCTTAGATACTGT+TGG | + | chr3_1:81215949-81215968 | None:intergenic | 35.0% | |
| ! | ATCTAAGGCATGTTTAAGCA+AGG | - | chr3_1:81215954-81215973 | Msa0379820:three_prime_UTR | 35.0% |
| TTCGATTGTCTCATGACTTT+AGG | - | chr3_1:81216169-81216188 | Msa0379820:CDS | 35.0% | |
| TTTGTCATGTATGTTGTGTC+TGG | - | chr3_1:81216223-81216242 | Msa0379820:CDS | 35.0% | |
| TGTTGACAGAAACCTAATTC+CGG | - | chr3_1:81216310-81216329 | Msa0379820:CDS | 35.0% | |
| CATAATCGATTACCGGAATT+AGG | + | chr3_1:81216325-81216344 | None:intergenic | 35.0% | |
| TTCTTGTGCAGTGATTGTAT+TGG | - | chr3_1:81216408-81216427 | Msa0379820:CDS | 35.0% | |
| ! | ACATTACATCTAGAAGGTAC+AGG | + | chr3_1:81216558-81216577 | None:intergenic | 35.0% |
| ACAGAAGTTTCGTCATTCAT+TGG | - | chr3_1:81216688-81216707 | Msa0379820:intron | 35.0% | |
| CTGGACTCGTGTAATTATTA+TGG | - | chr3_1:81216753-81216772 | Msa0379820:intron | 35.0% | |
| ! | GCACTGTAGTTTTTACATGT+AGG | + | chr3_1:81216972-81216991 | None:intergenic | 35.0% |
| GCTAATTGTGTACAATGGTT+GGG | + | chr3_1:81217092-81217111 | None:intergenic | 35.0% | |
| AGCTAATTGTGTACAATGGT+TGG | + | chr3_1:81217093-81217112 | None:intergenic | 35.0% | |
| TTACCATACGAAAGGATGAT+GGG | + | chr3_1:81217156-81217175 | None:intergenic | 35.0% | |
| !!! | TTTGGTTTTCCTTTTAGGAG+AGG | - | chr3_1:81217232-81217251 | Msa0379820:CDS | 35.0% |
| AGGAATTAGTAGGCTGAAAA+AGG | + | chr3_1:81217419-81217438 | None:intergenic | 35.0% | |
| AGGTCATGTAATGCTATATC+AGG | - | chr3_1:81217482-81217501 | Msa0379820:intron | 35.0% | |
| AAAGCCAATTATACCAAGAG+CGG | + | chr3_1:81217534-81217553 | None:intergenic | 35.0% | |
| ! | CAATTGCTTTAGACAACACA+TGG | + | chr3_1:81217633-81217652 | None:intergenic | 35.0% |
| TTCAGTGGAACGATAAAAGT+TGG | - | chr3_1:81217694-81217713 | Msa0379820:intron | 35.0% | |
| AGGACTTGACAAACTTTCAA+CGG | + | chr3_1:81217827-81217846 | None:intergenic | 35.0% | |
| AATCTACCTTGAAGAACAGT+AGG | + | chr3_1:81217980-81217999 | None:intergenic | 35.0% | |
| ATTATGTCCACAGTTGTTGT+CGG | - | chr3_1:81218014-81218033 | Msa0379820:CDS | 35.0% | |
| GGCGCAAGATATTAATAGTA+TGG | + | chr3_1:81218048-81218067 | None:intergenic | 35.0% | |
| ATGTTACACACACACATGAA+TGG | + | chr3_1:81218498-81218517 | None:intergenic | 35.0% | |
| CACCCTCATAATTAACATTG+TGG | + | chr3_1:81218638-81218657 | None:intergenic | 35.0% | |
| !! | CAGATGAGCATTGATCTTAT+CGG | - | chr3_1:81218711-81218730 | Msa0379820:intron | 35.0% |
| !! | AGATGAGCATTGATCTTATC+GGG | - | chr3_1:81218712-81218731 | Msa0379820:intron | 35.0% |
| AAGCTGTATATACTGCAGTA+TGG | - | chr3_1:81218736-81218755 | Msa0379820:intron | 35.0% | |
| AGCTGTATATACTGCAGTAT+GGG | - | chr3_1:81218737-81218756 | Msa0379820:intron | 35.0% | |
| CAACTCCATAAACAATGACA+CGG | + | chr3_1:81218769-81218788 | None:intergenic | 35.0% | |
| GTCATTGTTTATGGAGTTGT+TGG | - | chr3_1:81218770-81218789 | Msa0379820:intron | 35.0% | |
| CATGAATCATCACACTTGAA+AGG | + | chr3_1:81219050-81219069 | None:intergenic | 35.0% | |
| ! | ATTTTCTGTAGCATGTAGGA+TGG | - | chr3_1:81219256-81219275 | Msa0379820:intron | 35.0% |
| TTCACACTCAACTTGTGATT+AGG | + | chr3_1:81219330-81219349 | None:intergenic | 35.0% | |
| TCCAGAAAATCAAGCTCTTA+TGG | - | chr3_1:81219631-81219650 | Msa0379820:intron | 35.0% | |
| ! | ACCATAAGAGCTTGATTTTC+TGG | + | chr3_1:81219635-81219654 | None:intergenic | 35.0% |
| GAACCAAGACTGAAGATAAA+GGG | + | chr3_1:81219729-81219748 | None:intergenic | 35.0% | |
| AGAACCAAGACTGAAGATAA+AGG | + | chr3_1:81219730-81219749 | None:intergenic | 35.0% | |
| !! | GGTTCTGAAAGGAAGTTATA+AGG | - | chr3_1:81219744-81219763 | Msa0379820:intron | 35.0% |
| ! | AAAGTACCAATTAGGCTTGT+AGG | - | chr3_1:81219803-81219822 | Msa0379820:intron | 35.0% |
| CTAGAAATGTAAACAAGCAG+AGG | + | chr3_1:81219858-81219877 | None:intergenic | 35.0% | |
| AGCAAAACCATAGGGTTAAA+TGG | + | chr3_1:81219910-81219929 | None:intergenic | 35.0% | |
| TGAATAGCAGCAAAACCATA+GGG | + | chr3_1:81219918-81219937 | None:intergenic | 35.0% | |
| AGGCAATACATAAATGACAC+AGG | + | chr3_1:81220129-81220148 | None:intergenic | 35.0% | |
| AATCTAGTCTCACCTTAACA+CGG | + | chr3_1:81220407-81220426 | None:intergenic | 35.0% | |
| AGCAACTCAATTGTATTAGC+TGG | - | chr3_1:81220538-81220557 | Msa0379820:intron | 35.0% | |
| TTTCCATGTGATAAAACAGG+AGG | - | chr3_1:81221029-81221048 | Msa0379820:CDS | 35.0% | |
| TCTAAGAAGATCCAAGAGAA+TGG | + | chr3_1:81221055-81221074 | None:intergenic | 35.0% | |
| TGTACATCTTCTGAATTGTG+CGG | + | chr3_1:81221116-81221135 | None:intergenic | 35.0% | |
| AATTTGTGAATGGGAAAGAG+TGG | + | chr3_1:81221206-81221225 | None:intergenic | 35.0% | |
| !! | GTTGAAGGCTTAGCTTTATA+AGG | + | chr3_1:81221231-81221250 | None:intergenic | 35.0% |
| TATCAAGGTTTCACGAATCT+TGG | + | chr3_1:81221286-81221305 | None:intergenic | 35.0% | |
| ! | ATTCGTGAAACCTTGATAAC+TGG | - | chr3_1:81221288-81221307 | Msa0379820:CDS | 35.0% |
| AGATTCAGAGGCTAAATTTC+GGG | + | chr3_1:81221409-81221428 | None:intergenic | 35.0% | |
| TGGATTATCAGAAGATTCAG+AGG | + | chr3_1:81221421-81221440 | None:intergenic | 35.0% | |
| TTCTGATAATCCAGTTCAGA+AGG | - | chr3_1:81221428-81221447 | Msa0379820:CDS | 35.0% | |
| TTATCAAGCTTATGTCAAGC+TGG | - | chr3_1:81221622-81221641 | Msa0379820:intron | 35.0% | |
| TATCAAGCTTATGTCAAGCT+GGG | - | chr3_1:81221623-81221642 | Msa0379820:intron | 35.0% | |
| TCTCTCTCCAACAGTATCTA+AGG | - | chr3_1:81215939-81215958 | Msa0379820:three_prime_UTR | 40.0% | |
| ! | TAGAAGGTACAGGCTTATGT+TGG | + | chr3_1:81216548-81216567 | None:intergenic | 40.0% |
| AAACTTCTGTCAGCTACGAA+AGG | + | chr3_1:81216678-81216697 | None:intergenic | 40.0% | |
| TGACAGAGTTATCAGTGCAT+AGG | + | chr3_1:81216938-81216957 | None:intergenic | 40.0% | |
| AAAGGCTTTCTTTGACATGC+TGG | - | chr3_1:81217046-81217065 | Msa0379820:intron | 40.0% | |
| AAGGCTTTCTTTGACATGCT+GGG | - | chr3_1:81217047-81217066 | Msa0379820:intron | 40.0% | |
| !! | GATGATGGGAAATAACCATG+CGG | + | chr3_1:81217142-81217161 | None:intergenic | 40.0% |
| TTTCCCATCATCCTTTCGTA+TGG | - | chr3_1:81217150-81217169 | Msa0379820:intron | 40.0% | |
| GTTACCATACGAAAGGATGA+TGG | + | chr3_1:81217157-81217176 | None:intergenic | 40.0% | |
| TGAGAGAGTTACCATACGAA+AGG | + | chr3_1:81217164-81217183 | None:intergenic | 40.0% | |
| TGGAGGAGTGAGTAGTTATT+GGG | - | chr3_1:81217264-81217283 | Msa0379820:intron | 40.0% | |
| AAGCCAATTATACCAAGAGC+GGG | + | chr3_1:81217533-81217552 | None:intergenic | 40.0% | |
| ! | ATTTTCAACCTTTGCTGCTG+TGG | - | chr3_1:81217751-81217770 | Msa0379820:intron | 40.0% |
| AGGTATCTTTCTGGATCAGA+AGG | - | chr3_1:81217795-81217814 | Msa0379820:intron | 40.0% | |
| ACGTCAAGGTGCATACAAAT+AGG | + | chr3_1:81217847-81217866 | None:intergenic | 40.0% | |
| ACCTTGACGTAAACTGTTTC+AGG | - | chr3_1:81217857-81217876 | Msa0379820:intron | 40.0% | |
| CCTTGACGTAAACTGTTTCA+GGG | - | chr3_1:81217858-81217877 | Msa0379820:intron | 40.0% | |
| CTTGACGTAAACTGTTTCAG+GGG | - | chr3_1:81217859-81217878 | Msa0379820:intron | 40.0% | |
| !! | GTTTTTGATTGCACGACTAG+TGG | + | chr3_1:81217892-81217911 | None:intergenic | 40.0% |
| !!! | CCAGTCCGATTTTAAAGCAA+CGG | - | chr3_1:81217911-81217930 | Msa0379820:intron | 40.0% |
| !! | AGCAGCCGTTGCTTTAAAAT+CGG | + | chr3_1:81217919-81217938 | None:intergenic | 40.0% |
| ACAGTAGGCAAATGTAAGCA+CGG | + | chr3_1:81217965-81217984 | None:intergenic | 40.0% | |
| CATTTGCCTACTGTTCTTCA+AGG | - | chr3_1:81217971-81217990 | Msa0379820:intron | 40.0% | |
| CACACACATGAATGGAAACA+TGG | + | chr3_1:81218490-81218509 | None:intergenic | 40.0% | |
| GAGCTTTGCATTTACATTCC+AGG | + | chr3_1:81218663-81218682 | None:intergenic | 40.0% | |
| ACAGTATTGCTTTCACTTGC+AGG | - | chr3_1:81218834-81218853 | Msa0379820:CDS | 40.0% | |
| TCCTTAAGAGCAACTCTTCA+CGG | - | chr3_1:81218969-81218988 | Msa0379820:intron | 40.0% | |
| GTGTGATGATTCATGCAACT+CGG | - | chr3_1:81219055-81219074 | Msa0379820:intron | 40.0% | |
| ATCCGCTCATTCACAACAAA+TGG | + | chr3_1:81219081-81219100 | None:intergenic | 40.0% | |
| AAAATGGAAACCACTCACGT+TGG | + | chr3_1:81219197-81219216 | None:intergenic | 40.0% | |
| AGTTGAGTGTGAATGTTGTG+AGG | - | chr3_1:81219337-81219356 | Msa0379820:intron | 40.0% | |
| AAGATTGATGTGAGTGCTCT+TGG | - | chr3_1:81219426-81219445 | Msa0379820:intron | 40.0% | |
| TGTGAGTGCTCTTGGTTTAA+TGG | - | chr3_1:81219434-81219453 | Msa0379820:intron | 40.0% | |
| GCTATCGCATCTTAAAACTG+AGG | - | chr3_1:81219488-81219507 | Msa0379820:intron | 40.0% | |
| ! | ATTGCACAGAAGGGTTTTTC+TGG | - | chr3_1:81219598-81219617 | Msa0379820:intron | 40.0% |
| CTTCCCTTTATCTTCAGTCT+TGG | - | chr3_1:81219723-81219742 | Msa0379820:CDS | 40.0% | |
| !! | TCTTCAGTCTTGGTTCTGAA+AGG | - | chr3_1:81219733-81219752 | Msa0379820:CDS | 40.0% |
| ATGCTATGAGATGCATCTCA+AGG | + | chr3_1:81219774-81219793 | None:intergenic | 40.0% | |
| TACTAGGCCATTTAACCCTA+TGG | - | chr3_1:81219900-81219919 | Msa0379820:CDS | 40.0% | |
| GTGAATAGCAGCAAAACCAT+AGG | + | chr3_1:81219919-81219938 | None:intergenic | 40.0% | |
| !! | TGAAGAGTATCTCCGTGTTA+AGG | - | chr3_1:81220392-81220411 | Msa0379820:intron | 40.0% |
| CTAGATTGACGATAGCAACT+TGG | - | chr3_1:81220420-81220439 | Msa0379820:intron | 40.0% | |
| ATGTACAAAAGCAACAAGCC+TGG | + | chr3_1:81220759-81220778 | None:intergenic | 40.0% | |
| CTTAGAGTCATCAGTCATCA+TGG | - | chr3_1:81221069-81221088 | Msa0379820:CDS | 40.0% | |
| ATCTTCTGAATTGTGCGGAT+GGG | + | chr3_1:81221111-81221130 | None:intergenic | 40.0% | |
| GTGAAAAAATTGCCGCAACA+TGG | - | chr3_1:81221325-81221344 | Msa0379820:intron | 40.0% | |
| ! | GGGTGATGTTTCTGATTTAG+AGG | + | chr3_1:81221454-81221473 | None:intergenic | 40.0% |
| !!! | ACACAGCTGTCTTTTTTAGC+TGG | - | chr3_1:81221530-81221549 | Msa0379820:intron | 40.0% |
| !!! | CACAGCTGTCTTTTTTAGCT+GGG | - | chr3_1:81221531-81221550 | Msa0379820:intron | 40.0% |
| TAATACTAGACTGCCCTCAA+TGG | + | chr3_1:81221605-81221624 | None:intergenic | 40.0% | |
| TTGTCGCCTTCAATCATCCA+CGG | - | chr3_1:81216347-81216366 | Msa0379820:CDS | 45.0% | |
| ! | ACAGTAGCCACTTTCAACAG+CGG | + | chr3_1:81216627-81216646 | None:intergenic | 45.0% |
| TGGCTACTGTTTCGTTGTCA+AGG | - | chr3_1:81216637-81216656 | Msa0379820:intron | 45.0% | |
| ! | GACTTTGTGGTGCCAAACTT+TGG | - | chr3_1:81217214-81217233 | Msa0379820:intron | 45.0% |
| !! | GGTTTTCCTTTTAGGAGAGG+CGG | - | chr3_1:81217235-81217254 | Msa0379820:CDS | 45.0% |
| GTGGAGGAGTGAGTAGTTAT+TGG | - | chr3_1:81217263-81217282 | Msa0379820:intron | 45.0% | |
| ! | TTTAGAGTTTCGGTGCGGTT+CGG | + | chr3_1:81217296-81217315 | None:intergenic | 45.0% |
| CTTCAATTAATCCCCGCTCT+TGG | - | chr3_1:81217518-81217537 | Msa0379820:intron | 45.0% | |
| ATCCCCGCTCTTGGTATAAT+TGG | - | chr3_1:81217527-81217546 | Msa0379820:intron | 45.0% | |
| AGCCAATTATACCAAGAGCG+GGG | + | chr3_1:81217532-81217551 | None:intergenic | 45.0% | |
| CCCTGAAACAGTTTACGTCA+AGG | + | chr3_1:81217861-81217880 | None:intergenic | 45.0% | |
| !! | CCGTTGCTTTAAAATCGGAC+TGG | + | chr3_1:81217914-81217933 | None:intergenic | 45.0% |
| !! | GTTAATTATGAGGGTGCTCC+TGG | - | chr3_1:81218642-81218661 | Msa0379820:intron | 45.0% |
| ! | TGCTGCCGTGTCATTGTTTA+TGG | - | chr3_1:81218761-81218780 | Msa0379820:intron | 45.0% |
| !! | GGCCATTTGTTGTGAATGAG+CGG | - | chr3_1:81219076-81219095 | Msa0379820:intron | 45.0% |
| !! | TGAGGTTTCTGGTAGAGTTG+AGG | - | chr3_1:81219122-81219141 | Msa0379820:intron | 45.0% |
| TTCTGTAGCATGTAGGATGG+TGG | - | chr3_1:81219259-81219278 | Msa0379820:intron | 45.0% | |
| TGGTCACCAACAGTAGTTAG+AGG | - | chr3_1:81219279-81219298 | Msa0379820:intron | 45.0% | |
| TCAGCACCTCTAACTACTGT+TGG | + | chr3_1:81219288-81219307 | None:intergenic | 45.0% | |
| ! | TCACCTTGCTATCAGTCACT+TGG | - | chr3_1:81219395-81219414 | Msa0379820:intron | 45.0% |
| CATCCAAGTGACTGATAGCA+AGG | + | chr3_1:81219401-81219420 | None:intergenic | 45.0% | |
| CTTGCGCATATCAGCTATGA+TGG | + | chr3_1:81219543-81219562 | None:intergenic | 45.0% | |
| CATCATAGCTGATATGCGCA+AGG | - | chr3_1:81219541-81219560 | Msa0379820:intron | 45.0% | |
| ! | AGCTGATATGCGCAAGGTTT+TGG | - | chr3_1:81219547-81219566 | Msa0379820:intron | 45.0% |
| ATGCATCTCATAGCATAGCC+AGG | - | chr3_1:81219778-81219797 | Msa0379820:intron | 45.0% | |
| TGCATCTCATAGCATAGCCA+GGG | - | chr3_1:81219779-81219798 | Msa0379820:intron | 45.0% | |
| CTACAGCCTACAAGCCTAAT+TGG | + | chr3_1:81219812-81219831 | None:intergenic | 45.0% | |
| ATTGCCACCGTAGTTGAATC+AGG | - | chr3_1:81219941-81219960 | Msa0379820:intron | 45.0% | |
| GAAACCTGATTCAACTACGG+TGG | + | chr3_1:81219948-81219967 | None:intergenic | 45.0% | |
| ! | TGATTGGCTATCTTCACCCA+TGG | - | chr3_1:81220173-81220192 | Msa0379820:intron | 45.0% |
| AAATGCTTCATTGCCGCCAT+GGG | + | chr3_1:81220192-81220211 | None:intergenic | 45.0% | |
| TAAATGCTTCATTGCCGCCA+TGG | + | chr3_1:81220193-81220212 | None:intergenic | 45.0% | |
| ! | TGGCCTCCTGTTTTATCACA+TGG | + | chr3_1:81221035-81221054 | None:intergenic | 45.0% |
| AAAACAGGAGGCCATTCTCT+TGG | - | chr3_1:81221041-81221060 | Msa0379820:CDS | 45.0% | |
| TCATCAGTCATCATGGAGCT+CGG | - | chr3_1:81221076-81221095 | Msa0379820:CDS | 45.0% | |
| CATCTTCTGAATTGTGCGGA+TGG | + | chr3_1:81221112-81221131 | None:intergenic | 45.0% | |
| GTGAAAATGGGGTCGTCAAA+TGG | + | chr3_1:81221162-81221181 | None:intergenic | 45.0% | |
| CTCTCGAACGAGTGAAAATG+GGG | + | chr3_1:81221173-81221192 | None:intergenic | 45.0% | |
| GCTCTCGAACGAGTGAAAAT+GGG | + | chr3_1:81221174-81221193 | None:intergenic | 45.0% | |
| TGCTCTCGAACGAGTGAAAA+TGG | + | chr3_1:81221175-81221194 | None:intergenic | 45.0% | |
| TTTCACTCGTTCGAGAGCAA+AGG | - | chr3_1:81221176-81221195 | Msa0379820:intron | 45.0% | |
| TTCACTCGTTCGAGAGCAAA+GGG | - | chr3_1:81221177-81221196 | Msa0379820:intron | 45.0% | |
| TGGGACTTTACACTGGATGA+GGG | + | chr3_1:81221354-81221373 | None:intergenic | 45.0% | |
| CTTATCCTGGGACTTTACAC+TGG | + | chr3_1:81221361-81221380 | None:intergenic | 45.0% | |
| GATTTAGAGGCCTTCTGAAC+TGG | + | chr3_1:81221441-81221460 | None:intergenic | 45.0% | |
| CCTCAATGGCTAATCAGCTA+GGG | + | chr3_1:81221591-81221610 | None:intergenic | 45.0% | |
| ! | CCTAGCTGATTAGCCATTGA+GGG | - | chr3_1:81221589-81221608 | Msa0379820:intron | 45.0% |
| CTTATGTCAAGCTGGGTCTA+TGG | - | chr3_1:81221630-81221649 | Msa0379820:intron | 45.0% | |
| ACCATGCCGTGGATGATTGA+AGG | + | chr3_1:81216356-81216375 | None:intergenic | 50.0% | |
| CAATCATCCACGGCATGGTT+TGG | - | chr3_1:81216357-81216376 | Msa0379820:CDS | 50.0% | |
| AGACATACCAAACCATGCCG+TGG | + | chr3_1:81216367-81216386 | None:intergenic | 50.0% | |
| ! | TTTGTTGTGTCGGTCTGCCT+TGG | - | chr3_1:81216578-81216597 | Msa0379820:intron | 50.0% |
| CACAAAAGCTTCAGACCGCA+TGG | - | chr3_1:81217124-81217143 | Msa0379820:intron | 50.0% | |
| !! | TTTCCTTTTAGGAGAGGCGG+TGG | - | chr3_1:81217238-81217257 | Msa0379820:CDS | 50.0% |
| GGAGAAATAGAGCCCTGCAA+CGG | + | chr3_1:81217586-81217605 | None:intergenic | 50.0% | |
| AACCTTTGCTGCTGTGGACT+GGG | - | chr3_1:81217757-81217776 | Msa0379820:intron | 50.0% | |
| CTGCTCTGCAGGTATCTTTC+TGG | - | chr3_1:81217786-81217805 | Msa0379820:intron | 50.0% | |
| TAGAACGCCGACAACAACTG+TGG | + | chr3_1:81218024-81218043 | None:intergenic | 50.0% | |
| GCAGGTCGTGAGGTACAATA+AGG | - | chr3_1:81218852-81218871 | Msa0379820:CDS | 50.0% | |
| GCCGTGAAGAGTTGCTCTTA+AGG | + | chr3_1:81218973-81218992 | None:intergenic | 50.0% | |
| ! | GCACAGAAGGGTTTTTCTGG+AGG | - | chr3_1:81219601-81219620 | Msa0379820:intron | 50.0% |
| ! | GCCAGGGCAAAGTACCAATT+AGG | - | chr3_1:81219795-81219814 | Msa0379820:intron | 50.0% |
| GCCTAATTGGTACTTTGCCC+TGG | + | chr3_1:81219799-81219818 | None:intergenic | 50.0% | |
| AGGCTTGTAGGCTGTAGCTA+TGG | - | chr3_1:81219815-81219834 | Msa0379820:intron | 50.0% | |
| TTGGCTATCTTCACCCATGG+CGG | - | chr3_1:81220176-81220195 | Msa0379820:intron | 50.0% | |
| GCTGATATCGGAGATTGTCC+AGG | - | chr3_1:81220738-81220757 | Msa0379820:intron | 50.0% | |
| CTGGGACTTTACACTGGATG+AGG | + | chr3_1:81221355-81221374 | None:intergenic | 50.0% | |
| CTCATCCAGTGTAAAGTCCC+AGG | - | chr3_1:81221353-81221372 | Msa0379820:intron | 50.0% | |
| ! | CCCTAGCTGATTAGCCATTG+AGG | - | chr3_1:81221588-81221607 | Msa0379820:intron | 50.0% |
| CCCTCAATGGCTAATCAGCT+AGG | + | chr3_1:81221592-81221611 | None:intergenic | 50.0% | |
| GTCAAGCTGGGTCTATGGAA+TGG | - | chr3_1:81221635-81221654 | Msa0379820:intron | 50.0% | |
| GCTGGGTCTATGGAATGGTT+CGG | - | chr3_1:81221640-81221659 | Msa0379820:intron | 50.0% | |
| !! | GGTCTATGGAATGGTTCGGT+TGG | - | chr3_1:81221644-81221663 | Msa0379820:intron | 50.0% |
| GCCTTCAATCATCCACGGCA+TGG | - | chr3_1:81216352-81216371 | Msa0379820:CDS | 55.0% | |
| TGAGGCTCCGCTGTTGAAAG+TGG | - | chr3_1:81216617-81216636 | Msa0379820:intron | 55.0% | |
| TGAGATTTGTGTCGGGCGTG+TGG | - | chr3_1:81217192-81217211 | Msa0379820:intron | 55.0% | |
| CAACCTTTGCTGCTGTGGAC+TGG | - | chr3_1:81217756-81217775 | Msa0379820:intron | 55.0% | |
| ! | ACCTTTGCTGCTGTGGACTG+GGG | - | chr3_1:81217758-81217777 | Msa0379820:intron | 55.0% |
| TCTCTCCGCACAGAAGTGGT+TGG | - | chr3_1:81218794-81218813 | Msa0379820:CDS | 55.0% | |
| AGCAGCCAACCACTTCTGTG+CGG | + | chr3_1:81218802-81218821 | None:intergenic | 55.0% | |
| ! | TGGTTGGCTGCTGGTGGTAT+GGG | - | chr3_1:81218810-81218829 | Msa0379820:CDS | 55.0% |
| GCTTTCACTTGCAGGTCGTG+AGG | - | chr3_1:81218842-81218861 | Msa0379820:CDS | 55.0% | |
| GCGAACTGATCCAACGTGAG+TGG | - | chr3_1:81219184-81219203 | Msa0379820:CDS | 55.0% | |
| CTGAATTGTGCGGATGGGTG+TGG | + | chr3_1:81221106-81221125 | None:intergenic | 55.0% | |
| ! | GTGTCGGTCTGCCTTGGTAC+CGG | - | chr3_1:81216584-81216603 | Msa0379820:intron | 60.0% |
| TGTCGGGCGTGTGGACTTTG+TGG | - | chr3_1:81217201-81217220 | Msa0379820:intron | 60.0% | |
| !! | CCTTTTAGGAGAGGCGGTGG+CGG | - | chr3_1:81217241-81217260 | Msa0379820:CDS | 60.0% |
| AACCTCTCCTACGCCGTTGC+AGG | - | chr3_1:81217570-81217589 | Msa0379820:intron | 60.0% | |
| ACCTCTCCTACGCCGTTGCA+GGG | - | chr3_1:81217571-81217590 | Msa0379820:intron | 60.0% | |
| ATAGAGCCCTGCAACGGCGT+AGG | + | chr3_1:81217580-81217599 | None:intergenic | 60.0% | |
| ACCCCAGTCCACAGCAGCAA+AGG | + | chr3_1:81217762-81217781 | None:intergenic | 60.0% | |
| CTGGGGTAATGCTGCTCTGC+AGG | - | chr3_1:81217775-81217794 | Msa0379820:intron | 60.0% | |
| TGGGTCTCTCCGCACAGAAG+TGG | - | chr3_1:81218790-81218809 | Msa0379820:CDS | 60.0% | |
| ! | GCACAGAAGTGGTTGGCTGC+TGG | - | chr3_1:81218801-81218820 | Msa0379820:CDS | 60.0% |
| ! | CAGAAGTGGTTGGCTGCTGG+TGG | - | chr3_1:81218804-81218823 | Msa0379820:CDS | 60.0% |
| ! | GTGGTTGGCTGCTGGTGGTA+TGG | - | chr3_1:81218809-81218828 | Msa0379820:CDS | 60.0% |
| !! | GGATGAGGGCGTCCATGTTG+CGG | + | chr3_1:81221340-81221359 | None:intergenic | 60.0% |
| ACACGCTCCAGCCGGTACCA+AGG | + | chr3_1:81216598-81216617 | None:intergenic | 65.0% | |
| CCGCCACCGCCTCTCCTAAA+AGG | + | chr3_1:81217244-81217263 | None:intergenic | 65.0% | |
| ! | TTTAGGAGAGGCGGTGGCGG+TGG | - | chr3_1:81217244-81217263 | Msa0379820:CDS | 65.0% |
| !! | CGGTCTGCCTTGGTACCGGC+TGG | - | chr3_1:81216588-81216607 | Msa0379820:intron | 70.0% |
| !! | GGTACCGGCTGGAGCGTGTG+AGG | - | chr3_1:81216599-81216618 | Msa0379820:intron | 70.0% |
| GGAGCCTCACACGCTCCAGC+CGG | + | chr3_1:81216606-81216625 | None:intergenic | 70.0% | |
| GCCCTGCAACGGCGTAGGAG+AGG | + | chr3_1:81217575-81217594 | None:intergenic | 70.0% | |
| ! | AGGAGAGGCGGTGGCGGTGG+AGG | - | chr3_1:81217247-81217266 | Msa0379820:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 81215788 | 81221849 | 81215788 | ID=Msa0379820;Name=Msa0379820 |
| chr3_1 | mRNA | 81215788 | 81221849 | 81215788 | ID=Msa0379820-mRNA-1;Parent=Msa0379820;Name=Msa0379820-mRNA-1;_AED=0.24;_eAED=0.24;_QI=183|0.92|0.92|1|0.92|0.85|14|319|611 |
| chr3_1 | exon | 81215788 | 81216589 | 81215788 | ID=Msa0379820-mRNA-1:exon:20564;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81217224 | 81217280 | 81217224 | ID=Msa0379820-mRNA-1:exon:20563;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81217985 | 81218098 | 81217985 | ID=Msa0379820-mRNA-1:exon:20562;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81218182 | 81218370 | 81218182 | ID=Msa0379820-mRNA-1:exon:20561;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81218494 | 81218604 | 81218494 | ID=Msa0379820-mRNA-1:exon:20560;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81218774 | 81218923 | 81218774 | ID=Msa0379820-mRNA-1:exon:20559;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81219175 | 81219235 | 81219175 | ID=Msa0379820-mRNA-1:exon:20558;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81219645 | 81219758 | 81219645 | ID=Msa0379820-mRNA-1:exon:20557;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81219841 | 81219938 | 81219841 | ID=Msa0379820-mRNA-1:exon:20556;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81220027 | 81220153 | 81220027 | ID=Msa0379820-mRNA-1:exon:20555;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81220979 | 81221133 | 81220979 | ID=Msa0379820-mRNA-1:exon:20554;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81221259 | 81221318 | 81221259 | ID=Msa0379820-mRNA-1:exon:20553;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81221407 | 81221533 | 81221407 | ID=Msa0379820-mRNA-1:exon:20552;Parent=Msa0379820-mRNA-1 |
| chr3_1 | exon | 81221677 | 81221849 | 81221677 | ID=Msa0379820-mRNA-1:exon:20551;Parent=Msa0379820-mRNA-1 |
| chr3_1 | five_prime_UTR | 81221677 | 81221849 | 81221677 | ID=Msa0379820-mRNA-1:five_prime_utr;Parent=Msa0379820-mRNA-1 |
| chr3_1 | five_prime_UTR | 81221524 | 81221533 | 81221524 | ID=Msa0379820-mRNA-1:five_prime_utr;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81221407 | 81221523 | 81221407 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81221259 | 81221318 | 81221259 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81220979 | 81221133 | 81220979 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81220027 | 81220153 | 81220027 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81219841 | 81219938 | 81219841 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81219645 | 81219758 | 81219645 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81219175 | 81219235 | 81219175 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81218774 | 81218923 | 81218774 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81218494 | 81218604 | 81218494 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81218182 | 81218370 | 81218182 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81217985 | 81218098 | 81217985 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81217224 | 81217280 | 81217224 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | CDS | 81216107 | 81216589 | 81216107 | ID=Msa0379820-mRNA-1:cds;Parent=Msa0379820-mRNA-1 |
| chr3_1 | three_prime_UTR | 81215788 | 81216106 | 81215788 | ID=Msa0379820-mRNA-1:three_prime_utr;Parent=Msa0379820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
