Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0060510 | XP_003589591.1 | 93.486 | 1182 | 73 | 1 | 1 | 1182 | 1 | 1178 | 0.0 | 2295 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0060510 | sp|Q4QY64|ATAD5_MOUSE | 26.615 | 387 | 209 | 8 | 266 | 588 | 1018 | 1393 | 1.35e-28 | 129 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0060510 | G7I8G1 | 93.486 | 1182 | 73 | 1 | 1 | 1182 | 1 | 1178 | 0.0 | 2295 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011160 | Msa0060510 | 0.818745 | 1.669534e-52 | -8.615850e-47 |
Msa0011590 | Msa0060510 | 0.860826 | 1.575151e-63 | -8.615850e-47 |
Msa0060510 | Msa0077670 | 0.804989 | 1.657127e-49 | -8.615850e-47 |
Msa0060510 | Msa0199800 | -0.800420 | 1.453320e-48 | -8.615850e-47 |
Msa0060510 | Msa0261930 | 0.801588 | 8.389881e-49 | -8.615850e-47 |
Msa0060510 | Msa0464900 | 0.834466 | 2.949439e-56 | -8.615850e-47 |
Msa0060510 | Msa0473240 | 0.812048 | 5.156491e-51 | -8.615850e-47 |
Msa0060510 | Msa0517490 | 0.806565 | 7.734966e-50 | -8.615850e-47 |
Msa0060510 | Msa0638280 | 0.813400 | 2.609003e-51 | -8.615850e-47 |
Msa0060510 | Msa0638320 | 0.802905 | 4.493604e-49 | -8.615850e-47 |
Msa0060510 | Msa0658570 | 0.809434 | 1.895827e-50 | -8.615850e-47 |
Msa0060510 | Msa0688070 | 0.803770 | 2.974343e-49 | -8.615850e-47 |
Msa0060510 | Msa1021510 | 0.808288 | 3.333842e-50 | -8.615850e-47 |
Msa0060510 | Msa1037700 | -0.820099 | 8.201973e-53 | -8.615850e-47 |
Msa0060510 | Msa1105500 | 0.803686 | 3.096763e-49 | -8.615850e-47 |
Msa0060510 | Msa1124540 | -0.809944 | 1.472856e-50 | -8.615850e-47 |
Msa0060510 | Msa1224480 | 0.804838 | 1.782154e-49 | -8.615850e-47 |
Msa0060510 | Msa1267060 | 0.826981 | 2.012963e-54 | -8.615850e-47 |
Msa0060510 | Msa1376890 | 0.811830 | 5.754527e-51 | -8.615850e-47 |
Msa0060510 | Msa1401530 | 0.820356 | 7.162232e-53 | -8.615850e-47 |
Msa0060510 | Msa1435400 | 0.825439 | 4.684245e-54 | -8.615850e-47 |
Msa0060510 | Msa1440940 | 0.801521 | 8.658460e-49 | -8.615850e-47 |
Msa0060510 | Msa1451620 | -0.816957 | 4.230629e-52 | -8.615850e-47 |
Msa0060510 | Msa1458550 | 0.809139 | 2.192747e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0060510 | MtrunA17_Chr1g0160121 | 93.486 | 1182 | 73 | 1 | 1 | 1182 | 1 | 1178 | 0.0 | 2295 |
Msa0060510 | MtrunA17_Chr3g0114611 | 54.281 | 1168 | 471 | 16 | 25 | 1172 | 70 | 1194 | 0.0 | 1106 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0060510 | AT1G77620.1 | 32.924 | 1221 | 669 | 38 | 4 | 1168 | 23 | 1149 | 4.28e-139 | 451 |
Find 244 sgRNAs with CRISPR-Local
Find 585 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGAAAGTTATCAAAATTTA+AGG | 0.124385 | 1_2:+18274832 | None:intergenic |
TCTACAGAATGTCTATTATT+TGG | 0.163033 | 1_2:+18269568 | None:intergenic |
TTAGCATCTTCCAGCTTTAA+AGG | 0.193872 | 1_2:+18274671 | None:intergenic |
CTTAGATTTCATTTGATAAT+AGG | 0.199465 | 1_2:-18267930 | Msa0060510:three_prime_UTR |
AGCAGAAGCGGGATCGAAAT+TGG | 0.212669 | 1_2:-18268631 | Msa0060510:CDS |
GGCTTCTACTACAAATATTA+TGG | 0.214892 | 1_2:-18268571 | Msa0060510:CDS |
ACTGCTGTCAAGCAGTATTT+TGG | 0.216334 | 1_2:-18271321 | Msa0060510:CDS |
TGTTCATGGTGTGAGGAATT+AGG | 0.220415 | 1_2:+18276314 | None:intergenic |
ACTACAAATATTATGGCTTT+TGG | 0.229067 | 1_2:-18268564 | Msa0060510:CDS |
GCTGAACATGCAGGGTATTA+TGG | 0.230458 | 1_2:-18268760 | Msa0060510:intron |
TAAGGTGGAAAAGAAATTTA+AGG | 0.235150 | 1_2:-18275589 | Msa0060510:CDS |
AATCCTCTGAAATTGAAATT+TGG | 0.243694 | 1_2:+18268244 | None:intergenic |
TTTGGTGAGCTACTGCATTC+TGG | 0.246063 | 1_2:-18269451 | Msa0060510:CDS |
ACCAGTCACGCAAGAAATTC+AGG | 0.253423 | 1_2:+18273965 | None:intergenic |
TTTGATATATATTGGGATTT+GGG | 0.255321 | 1_2:+18276372 | None:intergenic |
TGTAGTCTACAAAAGTTATT+TGG | 0.257206 | 1_2:+18270618 | None:intergenic |
GAGGAATTAGGGTTCAATTT+GGG | 0.264700 | 1_2:+18276326 | None:intergenic |
TTAGATTTCATTTGATAATA+GGG | 0.268450 | 1_2:-18267929 | Msa0060510:three_prime_UTR |
TGAGGAATTAGGGTTCAATT+TGG | 0.277034 | 1_2:+18276325 | None:intergenic |
CCATTCTGCATCTTCAGTTC+TGG | 0.277127 | 1_2:-18270372 | Msa0060510:CDS |
TATTTCTCTTGGAGAAGATT+TGG | 0.284568 | 1_2:+18269132 | None:intergenic |
TCGGAAACAAATCTTGATTC+TGG | 0.296800 | 1_2:+18269331 | None:intergenic |
TCTGAGTTATATAGTTGTTC+TGG | 0.300439 | 1_2:-18269667 | Msa0060510:CDS |
ACTATAGCTACTCATGGTTT+TGG | 0.301974 | 1_2:+18268518 | None:intergenic |
AAACCTCAAACCCTTGTTCT+TGG | 0.302769 | 1_2:+18273054 | None:intergenic |
GATGAAGGCAGTACTGTATC+AGG | 0.309635 | 1_2:-18274475 | Msa0060510:CDS |
GTTCATGGTGTGAGGAATTA+GGG | 0.314446 | 1_2:+18276315 | None:intergenic |
AAGAAAGTGCAGACATTATA+TGG | 0.315116 | 1_2:-18269976 | Msa0060510:CDS |
TTATTTGAGCAGAGGTAAAA+TGG | 0.324209 | 1_2:-18268064 | Msa0060510:CDS |
ATCCACGATCTTCAGGAAAA+AGG | 0.325167 | 1_2:+18270805 | None:intergenic |
TATACCTCTTATTGTTTCTT+CGG | 0.328972 | 1_2:+18268472 | None:intergenic |
GACTTCGTTCTCAATTAGTT+TGG | 0.333349 | 1_2:+18269876 | None:intergenic |
AGCTATGCCAGTACGTCTTT+TGG | 0.333721 | 1_2:-18269469 | Msa0060510:CDS |
TGTTGACTCTAGTCCATCTA+TGG | 0.335603 | 1_2:-18269014 | Msa0060510:CDS |
TAATTAAAAGAACATTCTTC+AGG | 0.338128 | 1_2:+18273803 | None:intergenic |
GAGTCTACAGTTGTGTCTTC+TGG | 0.342872 | 1_2:-18269280 | Msa0060510:CDS |
TCAGTAGTCACCACCAAATC+TGG | 0.343163 | 1_2:+18269160 | None:intergenic |
GGAAAAGAAATTTAAGGATT+CGG | 0.344345 | 1_2:-18275583 | Msa0060510:CDS |
ATTTCTCTTGGAGAAGATTT+GGG | 0.344875 | 1_2:+18269133 | None:intergenic |
GAAAAGAAATTTAAGGATTC+GGG | 0.348265 | 1_2:-18275582 | Msa0060510:CDS |
CCCTGAATTTCTTGCGTGAC+TGG | 0.351843 | 1_2:-18273966 | Msa0060510:CDS |
TCATGTATTTGAAGATATTA+CGG | 0.359838 | 1_2:-18275496 | Msa0060510:intron |
TGTTGTTGTTGTTCAGCTAC+TGG | 0.375512 | 1_2:+18276259 | None:intergenic |
CTGTTGCTGGTCAATATAAT+TGG | 0.375579 | 1_2:+18270741 | None:intergenic |
GTCAGTTTGATCCTTGTTAG+AGG | 0.378622 | 1_2:+18273900 | None:intergenic |
CATCTCTTGACTGGAGTGAT+TGG | 0.380843 | 1_2:-18274934 | Msa0060510:CDS |
TTTGATTCAATAGAAAGTTA+AGG | 0.382479 | 1_2:+18269491 | None:intergenic |
AACCTCAAACCCTTGTTCTT+GGG | 0.386304 | 1_2:+18273055 | None:intergenic |
TAACTTAGATGTTCAGTGTA+TGG | 0.388265 | 1_2:-18269770 | Msa0060510:CDS |
GCAATACATCCACGATCTTC+AGG | 0.389679 | 1_2:+18270798 | None:intergenic |
ATATCTTCAAATACATGAAT+AGG | 0.393586 | 1_2:+18275501 | None:intergenic |
TGAGCTACTGCATTCTGGTT+TGG | 0.393661 | 1_2:-18269446 | Msa0060510:CDS |
TAGCATCTTCCAGCTTTAAA+GGG | 0.397601 | 1_2:+18274672 | None:intergenic |
TGCGTGACTGGTTACATCAT+TGG | 0.404069 | 1_2:-18273954 | Msa0060510:CDS |
TCTTTAGCTTCTTTAACATT+AGG | 0.404506 | 1_2:+18270975 | None:intergenic |
GCCGTTGTTGATGATCTTGC+AGG | 0.405319 | 1_2:+18268309 | None:intergenic |
GTTGCTTCGTCACTTGTTAA+CGG | 0.406105 | 1_2:-18270565 | Msa0060510:intron |
TTGATTCAATAGAAAGTTAA+GGG | 0.406538 | 1_2:+18269492 | None:intergenic |
TCAGCTACTGGTTTCTGATT+CGG | 0.407682 | 1_2:+18276271 | None:intergenic |
ATAAGGCTGAGAGCAGCTTA+TGG | 0.408031 | 1_2:-18274164 | Msa0060510:CDS |
TGGTGGACACCTTGCTTGTC+CGG | 0.410037 | 1_2:-18269260 | Msa0060510:CDS |
TTCGGTGAATTGACATCGGT+TGG | 0.410937 | 1_2:+18276289 | None:intergenic |
AGACAAGGCATTCTGAGAAA+TGG | 0.412315 | 1_2:+18274784 | None:intergenic |
CTTTCAAACTCACCACGGTC+TGG | 0.412982 | 1_2:+18269706 | None:intergenic |
AGGGCATGTTTCTTTCTCAT+TGG | 0.415987 | 1_2:+18274691 | None:intergenic |
TGCTCTATATCTCAGTTTAG+TGG | 0.416926 | 1_2:-18271054 | Msa0060510:intron |
AAATCTGGTGCTATTTCTCT+TGG | 0.417438 | 1_2:+18269121 | None:intergenic |
TCTTTAACATTAGGCGAAGC+TGG | 0.426037 | 1_2:+18270984 | None:intergenic |
TACAAGAGACAGTCCCTTGA+AGG | 0.430502 | 1_2:-18269529 | Msa0060510:CDS |
CTGCCAAAGTTGTGAAGATA+AGG | 0.431284 | 1_2:-18274181 | Msa0060510:CDS |
AAGAATCAGTGTTGCCTTCA+AGG | 0.431318 | 1_2:+18269515 | None:intergenic |
ATCTGGATCTTGAGGCACTT+TGG | 0.434126 | 1_2:+18269177 | None:intergenic |
AGAAAGTTATCAAAATTTAA+GGG | 0.434763 | 1_2:+18274833 | None:intergenic |
ATATGCAAACTCACTGTTGC+TGG | 0.434866 | 1_2:+18270728 | None:intergenic |
TTTGAAGCATAGTCACAATC+AGG | 0.436058 | 1_2:+18273847 | None:intergenic |
AAATTAAATAGAGCAGCAAT+AGG | 0.447176 | 1_2:-18267769 | Msa0060510:three_prime_UTR |
GTTAATGGAGTTAAGGGAAC+TGG | 0.451103 | 1_2:-18275936 | Msa0060510:CDS |
CAGCCTTATCTTCACAACTT+TGG | 0.452105 | 1_2:+18274178 | None:intergenic |
CGAAGCAACTCATCTGGAAA+TGG | 0.454693 | 1_2:+18270579 | None:intergenic |
CGGGTCGGTTAATGGAGTTA+AGG | 0.454889 | 1_2:-18275943 | Msa0060510:CDS |
TTTCAGCGTTTGTCAGCGCT+TGG | 0.454940 | 1_2:-18269200 | Msa0060510:CDS |
GCAGAAGCGGGATCGAAATT+GGG | 0.455545 | 1_2:-18268630 | Msa0060510:CDS |
CTCTTTACTATAGCTACTCA+TGG | 0.455923 | 1_2:+18268512 | None:intergenic |
CAATGGAAAACCACTCAAGC+TGG | 0.456812 | 1_2:-18269837 | Msa0060510:CDS |
TATTATGATCATCATGGGTC+GGG | 0.459271 | 1_2:-18267797 | Msa0060510:three_prime_UTR |
GAAAATTCGAGGATGTTTGC+GGG | 0.467912 | 1_2:-18275642 | Msa0060510:CDS |
GACATCGGTTGGGTTGTTCA+TGG | 0.468678 | 1_2:+18276300 | None:intergenic |
AACTTAGATGTTCAGTGTAT+GGG | 0.468798 | 1_2:-18269769 | Msa0060510:CDS |
GAAAATTGATTTGCGGTTGG+AGG | 0.469124 | 1_2:-18275895 | Msa0060510:CDS |
TCCCGCTTCTGCTATATGCT+TGG | 0.471742 | 1_2:+18268641 | None:intergenic |
GGGTCGGTTAATGGAGTTAA+GGG | 0.472590 | 1_2:-18275942 | Msa0060510:CDS |
TTGGATCACAATGTGTCAAA+AGG | 0.473045 | 1_2:-18271290 | Msa0060510:intron |
AGTGCCTCAAGATCCAGATT+TGG | 0.473131 | 1_2:-18269173 | Msa0060510:CDS |
TGACCAGCCTCAAGATCAAA+AGG | 0.474195 | 1_2:+18269946 | None:intergenic |
AAAATATGTTAAAGAATGAA+TGG | 0.474521 | 1_2:+18267906 | None:intergenic |
AAGTGACGAAGCAACTCATC+TGG | 0.476047 | 1_2:+18270573 | None:intergenic |
AGGAATTAGGGTTCAATTTG+GGG | 0.476347 | 1_2:+18276327 | None:intergenic |
CATTAGGCGAAGCTGGAGCT+TGG | 0.479606 | 1_2:+18270991 | None:intergenic |
GGAAAATTCGAGGATGTTTG+CGG | 0.482351 | 1_2:-18275643 | Msa0060510:CDS |
TCTTCATCAGACAGGGAAGT+TGG | 0.482991 | 1_2:+18268732 | None:intergenic |
ATGTCAACTGTTGCTGTACA+TGG | 0.483504 | 1_2:-18268678 | Msa0060510:CDS |
ATAATTCTACATACCCCAAC+TGG | 0.483632 | 1_2:+18273775 | None:intergenic |
TGTGATTATTATGATCATCA+TGG | 0.487575 | 1_2:-18267803 | Msa0060510:three_prime_UTR |
CTGGTTCGCCTGACGTGGCT+CGG | 0.491132 | 1_2:-18275917 | Msa0060510:CDS |
ACATCACTACAAATTTACTT+TGG | 0.491579 | 1_2:+18269614 | None:intergenic |
CAGTTTGTCTGCTGCTAAGA+GGG | 0.493510 | 1_2:-18275547 | Msa0060510:CDS |
AGAAACATGCCCTTTAAAGC+TGG | 0.495333 | 1_2:-18274681 | Msa0060510:CDS |
AAATGTAAGTGTATTATCAA+TGG | 0.497253 | 1_2:+18270869 | None:intergenic |
TGTTTCGGCAATGTGTTGTA+TGG | 0.497684 | 1_2:+18270773 | None:intergenic |
ATAAATCACTTGATATGTCC+TGG | 0.499529 | 1_2:-18269357 | Msa0060510:CDS |
GGTAACATCCTCTTGGCAAA+AGG | 0.500082 | 1_2:-18269638 | Msa0060510:CDS |
CACAACAATGATATATCGTC+AGG | 0.500190 | 1_2:+18268033 | None:intergenic |
TGCCCAAGAACAAGGGTTTG+AGG | 0.503673 | 1_2:-18273057 | Msa0060510:CDS |
TTCCATTGTAGCTATTGACT+TGG | 0.505558 | 1_2:+18269852 | None:intergenic |
AGACATAACTTCAGAGATGT+TGG | 0.505661 | 1_2:-18268592 | Msa0060510:CDS |
TTGATGATTGGCATAGGAGT+AGG | 0.506674 | 1_2:-18267846 | Msa0060510:three_prime_UTR |
TAACTCTGAGGGGAAACTCC+AGG | 0.512348 | 1_2:+18269900 | None:intergenic |
GCAGTTTGTCTGCTGCTAAG+AGG | 0.512515 | 1_2:-18275548 | Msa0060510:CDS |
AATTAAAAGAACATTCTTCA+GGG | 0.512671 | 1_2:+18273804 | None:intergenic |
ATAAACTTCTCAAGTAAAAG+AGG | 0.515107 | 1_2:+18270424 | None:intergenic |
TGACAAACGCTGAAAGAGAA+TGG | 0.515735 | 1_2:+18269208 | None:intergenic |
TAAACGTCTCTTCATCAGAC+AGG | 0.516468 | 1_2:+18268724 | None:intergenic |
CACATTGCCGAAACAGCAAA+AGG | 0.518228 | 1_2:-18270765 | Msa0060510:CDS |
GAAAACCACTCAAGCTGGGA+AGG | 0.518997 | 1_2:-18269832 | Msa0060510:CDS |
GAATATCTCTGTCACAAGAC+TGG | 0.519467 | 1_2:+18270401 | None:intergenic |
TTATAATCACCATCACCATC+TGG | 0.519633 | 1_2:+18273874 | None:intergenic |
ATGATACTTCATCTCTTGAC+TGG | 0.519939 | 1_2:-18274943 | Msa0060510:CDS |
GTCCACTGATGCTATGGATA+AGG | 0.520330 | 1_2:-18269593 | Msa0060510:CDS |
GAGTGACTGCACTCATCCAT+CGG | 0.521670 | 1_2:+18269061 | None:intergenic |
TCAAAAGATGTTAGCGAGGA+GGG | 0.523175 | 1_2:-18273829 | Msa0060510:CDS |
GACCCTCGGTAACATCCTCT+TGG | 0.525045 | 1_2:-18269645 | Msa0060510:CDS |
ATGATAACCCTATCCGATGA+TGG | 0.525665 | 1_2:-18270930 | Msa0060510:CDS |
TCATCAGACAGGGAAGTTGG+AGG | 0.526181 | 1_2:+18268735 | None:intergenic |
TCGGTGAATTGACATCGGTT+GGG | 0.526361 | 1_2:+18276290 | None:intergenic |
ATGATGATCATAATAATCAC+AGG | 0.526388 | 1_2:+18267805 | None:intergenic |
ACTGTATCGATCTCCATAGA+TGG | 0.531998 | 1_2:+18269001 | None:intergenic |
CCCCTTCAAAATCCACTCCT+CGG | 0.532038 | 1_2:-18276195 | Msa0060510:CDS |
CATGAGCTCCATCATCGGAT+AGG | 0.532379 | 1_2:+18270922 | None:intergenic |
AACTTCTGAGACGTTCCACC+AGG | 0.532892 | 1_2:+18270897 | None:intergenic |
CTGATGAAGAGACGTTTAGT+TGG | 0.532923 | 1_2:-18268719 | Msa0060510:CDS |
CGCCAAGTCAATAGCTACAA+TGG | 0.533424 | 1_2:-18269854 | Msa0060510:CDS |
AAAGCTGGAAGATGCTAAAG+TGG | 0.534895 | 1_2:-18274666 | Msa0060510:intron |
CAGAAAGGATTCCTCTAACA+AGG | 0.536790 | 1_2:-18273911 | Msa0060510:CDS |
CAGGACTTGGAGGTGGATGA+AGG | 0.537608 | 1_2:-18274490 | Msa0060510:CDS |
AATTGGATTAGGAAAATTCG+AGG | 0.537859 | 1_2:-18275653 | Msa0060510:intron |
ATGAGCTCCATCATCGGATA+GGG | 0.538228 | 1_2:+18270923 | None:intergenic |
GATATATATTGGGATTTGGG+AGG | 0.538617 | 1_2:+18276375 | None:intergenic |
ATATATATTGGGATTTGGGA+GGG | 0.539549 | 1_2:+18276376 | None:intergenic |
TTATTACCAGGACTTGGAGG+TGG | 0.541586 | 1_2:-18274497 | Msa0060510:intron |
TTCTGGTTTGGAAGATTCAG+AGG | 0.541655 | 1_2:-18269434 | Msa0060510:CDS |
TGGCTCGGAAAATTGATTTG+CGG | 0.545116 | 1_2:-18275902 | Msa0060510:CDS |
AGCACCTGTCTGTTCTGAGC+TGG | 0.547082 | 1_2:+18268934 | None:intergenic |
AAATTATTACCAGGACTTGG+AGG | 0.547686 | 1_2:-18274500 | Msa0060510:intron |
ATGATAATTATTTAGGTATG+CGG | 0.547846 | 1_2:-18274000 | Msa0060510:intron |
TAGCTCACCAAAAGACGTAC+TGG | 0.549623 | 1_2:+18269462 | None:intergenic |
ATATAGTTGTTCTGGACCCT+CGG | 0.550650 | 1_2:-18269659 | Msa0060510:CDS |
GAAGTTGTTAAGCTTGCTAG+TGG | 0.551315 | 1_2:-18268908 | Msa0060510:CDS |
CTGAGAAATGGATGTGCTTG+AGG | 0.551351 | 1_2:+18274796 | None:intergenic |
TATGCTTGTGCCCAAGAACA+AGG | 0.551433 | 1_2:-18273065 | Msa0060510:CDS |
GATGATGGAGCTCATGGTCC+TGG | 0.552540 | 1_2:-18270915 | Msa0060510:CDS |
CTGATTCGGTGAATTGACAT+CGG | 0.554757 | 1_2:+18276285 | None:intergenic |
GCGCCAAATTTCAATTTCAG+AGG | 0.555629 | 1_2:-18268247 | Msa0060510:CDS |
AAGCTGGGAAGGGTTAGTTA+AGG | 0.555894 | 1_2:-18269821 | Msa0060510:CDS |
GTGATTATTATGATCATCAT+GGG | 0.557282 | 1_2:-18267802 | Msa0060510:three_prime_UTR |
TTATTATGATCATCATGGGT+CGG | 0.557395 | 1_2:-18267798 | Msa0060510:three_prime_UTR |
ATTAGTTTGGATAACTCTGA+GGG | 0.559852 | 1_2:+18269889 | None:intergenic |
TCGGAAAATTGATTTGCGGT+TGG | 0.559901 | 1_2:-18275898 | Msa0060510:CDS |
GGGAACTGGTTCGCCTGACG+TGG | 0.564149 | 1_2:-18275922 | Msa0060510:CDS |
GCCAAGCATATAGCAGAAGC+GGG | 0.564477 | 1_2:-18268642 | Msa0060510:CDS |
CCAGTCACGCAAGAAATTCA+GGG | 0.564944 | 1_2:+18273966 | None:intergenic |
AGAATCAGTGTTGCCTTCAA+GGG | 0.565025 | 1_2:+18269516 | None:intergenic |
AGTGATGTCCACTGATGCTA+TGG | 0.566893 | 1_2:-18269599 | Msa0060510:CDS |
ATCCTTATCCATAGCATCAG+TGG | 0.568152 | 1_2:+18269591 | None:intergenic |
AGTGACTGCACTCATCCATC+GGG | 0.568345 | 1_2:+18269062 | None:intergenic |
GCCTCAAGATCCAGATTTGG+TGG | 0.568603 | 1_2:-18269170 | Msa0060510:CDS |
CTATCCGATGATGGAGCTCA+TGG | 0.576560 | 1_2:-18270921 | Msa0060510:CDS |
TGCCAAGCATATAGCAGAAG+CGG | 0.578503 | 1_2:-18268643 | Msa0060510:CDS |
AATGGAAAACCACTCAAGCT+GGG | 0.579058 | 1_2:-18269836 | Msa0060510:CDS |
AATTGAATGTTGTACCTACT+CGG | 0.580618 | 1_2:+18274415 | None:intergenic |
CCAGAACTGAAGATGCAGAA+TGG | 0.580669 | 1_2:+18270372 | None:intergenic |
TTCGACGTTGACTTCTTCTG+TGG | 0.581012 | 1_2:+18270447 | None:intergenic |
CTAACCCTTCCCAGCTTGAG+TGG | 0.581738 | 1_2:+18269827 | None:intergenic |
TTTAATTACAGGACCAGTTG+GGG | 0.582149 | 1_2:-18273788 | Msa0060510:intron |
ACGACCGAAGAAACAATAAG+AGG | 0.582980 | 1_2:-18268476 | Msa0060510:intron |
GGGGTGGAATTGAGAAATTG+GGG | 0.585059 | 1_2:+18276347 | None:intergenic |
TGTTAAAGAAGCTAAAGAGA+TGG | 0.585445 | 1_2:-18270970 | Msa0060510:CDS |
AACTCTGAGGGGAAACTCCA+GGG | 0.593785 | 1_2:+18269901 | None:intergenic |
GAGGATTTCCGCATTTCACA+AGG | 0.594146 | 1_2:-18268228 | Msa0060510:CDS |
ACTTAGATGTTCAGTGTATG+GGG | 0.597797 | 1_2:-18269768 | Msa0060510:CDS |
AAATCTTGATTCTGGAAACC+AGG | 0.600916 | 1_2:+18269339 | None:intergenic |
TGCCAAGAGGATGTTACCGA+GGG | 0.601703 | 1_2:+18269643 | None:intergenic |
CGCAGCTGTGTATAACCCGA+TGG | 0.602819 | 1_2:-18269077 | Msa0060510:CDS |
AGAGCTTTGCATCAATGAGA+AGG | 0.605568 | 1_2:-18269797 | Msa0060510:CDS |
AAGACGTTATCAAAACAGAA+AGG | 0.607322 | 1_2:-18273926 | Msa0060510:CDS |
ACCACCAAATCTGGATCTTG+AGG | 0.607687 | 1_2:+18269169 | None:intergenic |
GCTGAACATTATTTGAGCAG+AGG | 0.607924 | 1_2:-18268072 | Msa0060510:CDS |
TCTACAGTTGTGTCTTCTGG+TGG | 0.608964 | 1_2:-18269277 | Msa0060510:CDS |
TGATGATCTTGCAGGAACAA+TGG | 0.609492 | 1_2:+18268317 | None:intergenic |
TTCACAGTATGCTGCTAGCG+TGG | 0.609688 | 1_2:-18267983 | Msa0060510:CDS |
TTACTCAGAGAAACATCTAC+CGG | 0.609977 | 1_2:+18269241 | None:intergenic |
AGGACCATGAGCTCCATCAT+CGG | 0.610961 | 1_2:+18270917 | None:intergenic |
AATTAGTTTGGATAACTCTG+AGG | 0.615241 | 1_2:+18269888 | None:intergenic |
TCGATACAGTGCAAAATGTG+TGG | 0.616276 | 1_2:-18268988 | Msa0060510:CDS |
ATCTTGCAGGAACAATGGAT+CGG | 0.620287 | 1_2:+18268322 | None:intergenic |
AAAACCACTCAAGCTGGGAA+GGG | 0.622887 | 1_2:-18269831 | Msa0060510:CDS |
TCTGCTGCTAAGAGGGAGAG+TGG | 0.625391 | 1_2:-18275540 | Msa0060510:CDS |
TTCTGGACTACAATCTACAA+TGG | 0.627792 | 1_2:+18274892 | None:intergenic |
CGTTGATTAAATTACCCTGG+AGG | 0.629714 | 1_2:+18276165 | None:intergenic |
TACTACAAAAGATGATACCC+TGG | 0.629872 | 1_2:-18269918 | Msa0060510:CDS |
CATGCCAGCTCAGAACAGAC+AGG | 0.630314 | 1_2:-18268938 | Msa0060510:CDS |
TGGTTTGGAAGATTCAGAGG+TGG | 0.632543 | 1_2:-18269431 | Msa0060510:CDS |
CAAACCAACAAAAGCCTCAG+AGG | 0.633080 | 1_2:-18274130 | Msa0060510:intron |
ACCTTACACAACGAAAAGAA+CGG | 0.635504 | 1_2:+18275606 | None:intergenic |
TTCAAAAGATGTTAGCGAGG+AGG | 0.638177 | 1_2:-18273830 | Msa0060510:CDS |
GGAGGCGAAATTGTCAGCTG+AGG | 0.639126 | 1_2:-18275877 | Msa0060510:intron |
ACAACAAGGATCATGCACTC+CGG | 0.639565 | 1_2:-18276242 | Msa0060510:CDS |
GTTGGGTTGTTCATGGTGTG+AGG | 0.641673 | 1_2:+18276307 | None:intergenic |
AAACATCTACCGGACAAGCA+AGG | 0.647550 | 1_2:+18269251 | None:intergenic |
ATGCTTGTGCCCAAGAACAA+GGG | 0.649836 | 1_2:-18273064 | Msa0060510:CDS |
CAGATGCTGAGCCACCGAGT+AGG | 0.651091 | 1_2:-18274429 | Msa0060510:intron |
GATATATCATTGTTGTGTGA+AGG | 0.651596 | 1_2:-18268027 | Msa0060510:CDS |
TTGCCAAGAGGATGTTACCG+AGG | 0.651979 | 1_2:+18269642 | None:intergenic |
ATGAAGGCAGTACTGTATCA+GGG | 0.653597 | 1_2:-18274474 | Msa0060510:CDS |
AAGTTGTTAAGCTTGCTAGT+GGG | 0.656691 | 1_2:-18268907 | Msa0060510:CDS |
TGGACTACAATCTACAATGG+TGG | 0.656866 | 1_2:+18274895 | None:intergenic |
GATGGAGCTCATGGTCCTGG+TGG | 0.657711 | 1_2:-18270912 | Msa0060510:CDS |
TGCTTCAAAAGATGTTAGCG+AGG | 0.658230 | 1_2:-18273833 | Msa0060510:CDS |
TTGTCAACAGCTCAATACAT+CGG | 0.659863 | 1_2:-18271358 | Msa0060510:intron |
GATCAAACTGACATACCAGA+TGG | 0.670055 | 1_2:-18273889 | Msa0060510:CDS |
ATACAGTGCAAAATGTGTGG+AGG | 0.671272 | 1_2:-18268985 | Msa0060510:CDS |
TGATGATCATAATAATCACA+GGG | 0.671717 | 1_2:+18267806 | None:intergenic |
CTAGAAATGTCAGACCTCTG+AGG | 0.672592 | 1_2:+18274116 | None:intergenic |
AAACGTCTCTTCATCAGACA+GGG | 0.675440 | 1_2:+18268725 | None:intergenic |
ATTGACTTTCAAACTCACCA+CGG | 0.678678 | 1_2:+18269701 | None:intergenic |
GGAATTAGGGTTCAATTTGG+GGG | 0.681335 | 1_2:+18276328 | None:intergenic |
TCCTGCAAGATCATCAACAA+CGG | 0.691180 | 1_2:-18268310 | Msa0060510:CDS |
TTTATCATCTGAATAAGACA+AGG | 0.711090 | 1_2:+18274769 | None:intergenic |
GAGAGTGGAAGAACTAACTG+TGG | 0.712518 | 1_2:-18275525 | Msa0060510:CDS |
TTAGTTTGGATAACTCTGAG+GGG | 0.713297 | 1_2:+18269890 | None:intergenic |
ATTAGATCTATTCCAGACCG+TGG | 0.713490 | 1_2:-18269718 | Msa0060510:CDS |
ATCATGTGTTCTGACTGTGT+AGG | 0.728555 | 1_2:+18274743 | None:intergenic |
ACTGACATACCAGATGGTGA+TGG | 0.730638 | 1_2:-18273883 | Msa0060510:CDS |
GTAGCTGAACAACAACAACA+AGG | 0.737627 | 1_2:-18276256 | Msa0060510:CDS |
TGAATGTTGTACCTACTCGG+TGG | 0.740553 | 1_2:+18274418 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGTTTTATGATAATTATTT+AGG | - | chr1_2:18270106-18270125 | Msa0060510:intron | 10.0% |
!! | AAAATTTCAGTAATTTAATT+GGG | - | chr1_2:18270605-18270624 | Msa0060510:CDS | 10.0% |
!!! | TTTTAGATTTTATACAAAAA+CGG | + | chr1_2:18270840-18270859 | None:intergenic | 10.0% |
!!! | CTTTATTTATAAATATGTTT+TGG | - | chr1_2:18271091-18271110 | Msa0060510:intron | 10.0% |
!!! | TTTTAAAAAATTGACTATTT+GGG | + | chr1_2:18271184-18271203 | None:intergenic | 10.0% |
!!! | ATTTTTTAAAAGCATATATA+TGG | - | chr1_2:18271193-18271212 | Msa0060510:intron | 10.0% |
!!! | ATATTATTATCATTTTAAGA+TGG | - | chr1_2:18272053-18272072 | Msa0060510:intron | 10.0% |
!!! | TTTTTTTAAATTAGGTAAAA+AGG | - | chr1_2:18273464-18273483 | Msa0060510:intron | 10.0% |
!!! | GTTAAAAAAATAGACTTTTT+CGG | - | chr1_2:18268285-18268304 | Msa0060510:CDS | 15.0% |
!!! | TTAAAAAAATAGACTTTTTC+GGG | - | chr1_2:18268286-18268305 | Msa0060510:CDS | 15.0% |
!!! | TTTTGCGAAAATATTTATAA+GGG | - | chr1_2:18268317-18268336 | Msa0060510:CDS | 15.0% |
!! | AGAAAGTTATCAAAATTTAA+GGG | + | chr1_2:18269283-18269302 | None:intergenic | 15.0% |
!! | AAGAAAGTTATCAAAATTTA+AGG | + | chr1_2:18269284-18269303 | None:intergenic | 15.0% |
!! | GAAAATTTCAGTAATTTAAT+TGG | - | chr1_2:18270604-18270623 | Msa0060510:CDS | 15.0% |
!!! | CTTTTAAAAAATTGACTATT+TGG | + | chr1_2:18271185-18271204 | None:intergenic | 15.0% |
!!! | ATTTAAACAATGAAATCTTT+TGG | + | chr1_2:18271585-18271604 | None:intergenic | 15.0% |
!! | GATTTCATTGTTTAAATATT+TGG | - | chr1_2:18271588-18271607 | Msa0060510:intron | 15.0% |
!! | AAAATAACAATTTGAAGATA+GGG | + | chr1_2:18273897-18273916 | None:intergenic | 15.0% |
!! | AAAAATAACAATTTGAAGAT+AGG | + | chr1_2:18273898-18273917 | None:intergenic | 15.0% |
!!! | TTGTTATTTTTTTTTAACGA+CGG | - | chr1_2:18273907-18273926 | Msa0060510:CDS | 15.0% |
!!! | TTAGATTTCATTTGATAATA+GGG | - | chr1_2:18276184-18276203 | Msa0060510:CDS | 15.0% |
!! | AAAATATGTTAAAGAATGAA+TGG | + | chr1_2:18276210-18276229 | None:intergenic | 15.0% |
!! | TTTGATATATATTGGGATTT+GGG | + | chr1_2:18267744-18267763 | None:intergenic | 20.0% |
!!! | TTTTGATATATATTGGGATT+TGG | + | chr1_2:18267745-18267764 | None:intergenic | 20.0% |
!!! | TAAAAAAATAGACTTTTTCG+GGG | - | chr1_2:18268287-18268306 | Msa0060510:CDS | 20.0% |
!!! | GTTTTGCGAAAATATTTATA+AGG | - | chr1_2:18268316-18268335 | Msa0060510:CDS | 20.0% |
!! | ATATCTTCAAATACATGAAT+AGG | + | chr1_2:18268615-18268634 | None:intergenic | 20.0% |
!! | TCATGTATTTGAAGATATTA+CGG | - | chr1_2:18268617-18268636 | Msa0060510:CDS | 20.0% |
!!! | GAATTTAAAACCAATAAAGT+GGG | + | chr1_2:18269102-18269121 | None:intergenic | 20.0% |
!!! | AGAATTTAAAACCAATAAAG+TGG | + | chr1_2:18269103-18269122 | None:intergenic | 20.0% |
!!! | AAGTTCAAAATTTTCTGTTA+TGG | - | chr1_2:18269243-18269262 | Msa0060510:CDS | 20.0% |
!!! | AATTTTGATAACTTTCTTAG+TGG | - | chr1_2:18269286-18269305 | Msa0060510:CDS | 20.0% |
!! | ATTGGTCATTTAAAAGAAAA+TGG | - | chr1_2:18269779-18269798 | Msa0060510:CDS | 20.0% |
!!! | TTTTATTAGAAAAACAAGCA+AGG | + | chr1_2:18269814-18269833 | None:intergenic | 20.0% |
!! | ATCATAAAACAAGAAAAGTA+TGG | + | chr1_2:18270098-18270117 | None:intergenic | 20.0% |
!! | ATGATAATTATTTAGGTATG+CGG | - | chr1_2:18270113-18270132 | Msa0060510:intron | 20.0% |
!! | AATTAAAAGAACATTCTTCA+GGG | + | chr1_2:18270312-18270331 | None:intergenic | 20.0% |
!! | TAATTAAAAGAACATTCTTC+AGG | + | chr1_2:18270313-18270332 | None:intergenic | 20.0% |
!!! | AAGAATGTTCTTTTAATTAC+AGG | - | chr1_2:18270314-18270333 | Msa0060510:intron | 20.0% |
!!! | TGTTAACAATACTTTAAGTT+TGG | + | chr1_2:18271694-18271713 | None:intergenic | 20.0% |
!!! | ACTTAAAGTATTGTTAACAT+TGG | - | chr1_2:18271695-18271714 | Msa0060510:intron | 20.0% |
!! | AAGTATATTGAAAAATGATG+TGG | - | chr1_2:18272597-18272616 | Msa0060510:intron | 20.0% |
!! | TGTAATTTCAGTTATCAATT+TGG | - | chr1_2:18272707-18272726 | Msa0060510:intron | 20.0% |
!! | TAAAATTGAATTAAGGAAGA+AGG | + | chr1_2:18272970-18272989 | None:intergenic | 20.0% |
!! | AAATGTAAGTGTATTATCAA+TGG | + | chr1_2:18273247-18273266 | None:intergenic | 20.0% |
!!! | TCAAACTTTAATTTTAGTTG+AGG | - | chr1_2:18273275-18273294 | Msa0060510:intron | 20.0% |
!!! | CGTGTTCATTTTTTTAAATT+AGG | - | chr1_2:18273456-18273475 | Msa0060510:intron | 20.0% |
!!! | CTTTGCTATATTTTTTATTC+TGG | + | chr1_2:18273769-18273788 | None:intergenic | 20.0% |
!! | CAGAATAAAAAATATAGCAA+AGG | - | chr1_2:18273767-18273786 | Msa0060510:intron | 20.0% |
!! | ACAATATCTTCATCTTAAAA+GGG | + | chr1_2:18273805-18273824 | None:intergenic | 20.0% |
!! | AACAATATCTTCATCTTAAA+AGG | + | chr1_2:18273806-18273825 | None:intergenic | 20.0% |
!! | TTGATTCAATAGAAAGTTAA+GGG | + | chr1_2:18274624-18274643 | None:intergenic | 20.0% |
!! | TTTGATTCAATAGAAAGTTA+AGG | + | chr1_2:18274625-18274644 | None:intergenic | 20.0% |
!! | TTGAAGAAAAAACTTTATCA+AGG | + | chr1_2:18275299-18275318 | None:intergenic | 20.0% |
!!! | AAGAGGTATATAAATAAACA+TGG | - | chr1_2:18275654-18275673 | Msa0060510:intron | 20.0% |
!! | GTTAACAAGAAAATTCTTAA+TGG | - | chr1_2:18275989-18276008 | Msa0060510:intron | 20.0% |
!!! | CTTAGATTTCATTTGATAAT+AGG | - | chr1_2:18276183-18276202 | Msa0060510:CDS | 20.0% |
!! | TGGGGTTTTTGATATATATT+GGG | + | chr1_2:18267751-18267770 | None:intergenic | 25.0% |
!! | TTGGGGTTTTTGATATATAT+TGG | + | chr1_2:18267752-18267771 | None:intergenic | 25.0% |
!!! | TGTTAATTTTAGCTGTAATG+TGG | - | chr1_2:18268009-18268028 | Msa0060510:CDS | 25.0% |
! | AAAGAGAATTGTGTAATTGA+GGG | - | chr1_2:18268095-18268114 | Msa0060510:intron | 25.0% |
!! | GAGTTTCTTTTATCTCTAAT+TGG | - | chr1_2:18268443-18268462 | Msa0060510:intron | 25.0% |
!! | CTTTTATCTCTAATTGGATT+AGG | - | chr1_2:18268449-18268468 | Msa0060510:intron | 25.0% |
! | TAAGGTGGAAAAGAAATTTA+AGG | - | chr1_2:18268524-18268543 | Msa0060510:CDS | 25.0% |
! | GGAAAAGAAATTTAAGGATT+CGG | - | chr1_2:18268530-18268549 | Msa0060510:CDS | 25.0% |
! | GAAAAGAAATTTAAGGATTC+GGG | - | chr1_2:18268531-18268550 | Msa0060510:CDS | 25.0% |
! | GTTCTTTCTATGATTTAATG+TGG | - | chr1_2:18268655-18268674 | Msa0060510:CDS | 25.0% |
!! | TATATGCATACCTTTTGTAA+TGG | - | chr1_2:18268714-18268733 | Msa0060510:CDS | 25.0% |
!! | ATATGCATACCTTTTGTAAT+GGG | - | chr1_2:18268715-18268734 | Msa0060510:CDS | 25.0% |
!! | AGTAAACAATTTGCTTTAGA+AGG | - | chr1_2:18268763-18268782 | Msa0060510:intron | 25.0% |
!! | ACAGAAAATTTTGAACTTTC+TGG | + | chr1_2:18269241-18269260 | None:intergenic | 25.0% |
!! | TTCAAAATTTTCTGTTATGG+AGG | - | chr1_2:18269246-18269265 | Msa0060510:CDS | 25.0% |
!! | TCAAAATTTTCTGTTATGGA+GGG | - | chr1_2:18269247-18269266 | Msa0060510:CDS | 25.0% |
! | TTTATCATCTGAATAAGACA+AGG | + | chr1_2:18269347-18269366 | None:intergenic | 25.0% |
! | TGTTTCCAAAAATTATTACC+AGG | - | chr1_2:18269604-18269623 | Msa0060510:CDS | 25.0% |
!! | AAATTTATTTCCTGATAGTG+AGG | - | chr1_2:18269874-18269893 | Msa0060510:CDS | 25.0% |
! | GATGATCATACATAGTTAAA+TGG | + | chr1_2:18270575-18270594 | None:intergenic | 25.0% |
!!! | GACAATTATCTTTGTTTTCT+TGG | - | chr1_2:18270648-18270667 | Msa0060510:intron | 25.0% |
!!! | AAAATTTTAGAAAGCACAAG+CGG | + | chr1_2:18270717-18270736 | None:intergenic | 25.0% |
!!! | TGTGCTTTCTAAAATTTTCT+TGG | - | chr1_2:18270719-18270738 | Msa0060510:intron | 25.0% |
!! | TTCAAGACTTACAATTTTCA+TGG | + | chr1_2:18270798-18270817 | None:intergenic | 25.0% |
! | AAATTGTAAGTCTTGAATCT+TGG | - | chr1_2:18270801-18270820 | Msa0060510:CDS | 25.0% |
!! | AACTTTAAAAGGGCAAAAAT+GGG | + | chr1_2:18270866-18270885 | None:intergenic | 25.0% |
!! | AAACTTTAAAAGGGCAAAAA+TGG | + | chr1_2:18270867-18270886 | None:intergenic | 25.0% |
! | ACTTGTTCATAACTTCATAT+TGG | - | chr1_2:18270974-18270993 | Msa0060510:CDS | 25.0% |
!! | ATTGACTATTTGGGATTAAT+AGG | + | chr1_2:18271175-18271194 | None:intergenic | 25.0% |
! | TAGGAATTAATTAGCCAAAT+TGG | - | chr1_2:18271227-18271246 | Msa0060510:intron | 25.0% |
! | AGGAATTAATTAGCCAAATT+GGG | - | chr1_2:18271228-18271247 | Msa0060510:intron | 25.0% |
! | TAAACTCCGAAATATAGAAA+AGG | + | chr1_2:18271281-18271300 | None:intergenic | 25.0% |
! | GTCTATGTATACTTCATATT+AGG | + | chr1_2:18271316-18271335 | None:intergenic | 25.0% |
!!! | ATGAGAAGTTATTTCTAGTT+AGG | + | chr1_2:18271542-18271561 | None:intergenic | 25.0% |
! | AAATAGGATTCTCTTCTAAA+AGG | + | chr1_2:18271657-18271676 | None:intergenic | 25.0% |
! | GGATTGTTAAGATTTCAAAT+AGG | + | chr1_2:18271673-18271692 | None:intergenic | 25.0% |
!!! | GTTAATTTTGAAGTTGATGA+AGG | + | chr1_2:18271842-18271861 | None:intergenic | 25.0% |
!!! | ATTTTAAGATGGTGAAAACT+AGG | - | chr1_2:18272064-18272083 | Msa0060510:intron | 25.0% |
! | TAATGAGCTGGATAAAAATA+TGG | - | chr1_2:18272230-18272249 | Msa0060510:intron | 25.0% |
! | GTTATTAAGAAAGTAAGTGA+TGG | + | chr1_2:18272490-18272509 | None:intergenic | 25.0% |
! | TATACTGATGTTTATAGGAA+AGG | + | chr1_2:18272523-18272542 | None:intergenic | 25.0% |
!!! | GTTGGAAATCATTACTTTTT+TGG | - | chr1_2:18272548-18272567 | Msa0060510:intron | 25.0% |
! | TTTCAATATACTTCCTATTG+AGG | + | chr1_2:18272590-18272609 | None:intergenic | 25.0% |
!!! | TTTTTAGAAAGAATGCTCAT+AGG | + | chr1_2:18272639-18272658 | None:intergenic | 25.0% |
! | AATTTGGCCATAACTATTAA+AGG | - | chr1_2:18272723-18272742 | Msa0060510:intron | 25.0% |
! | GAGATAACCTTTAATAGTTA+TGG | + | chr1_2:18272733-18272752 | None:intergenic | 25.0% |
!! | CTTAAGATTTAAGACATCTA+TGG | + | chr1_2:18272887-18272906 | None:intergenic | 25.0% |
!! | AAGCAATAAGCTTTTAATGT+TGG | - | chr1_2:18272904-18272923 | Msa0060510:intron | 25.0% |
!! | TCTTTAGCTTCTTTAACATT+AGG | + | chr1_2:18273141-18273160 | None:intergenic | 25.0% |
!!! | TTTAATTTTAGTTGAGGATG+TGG | - | chr1_2:18273281-18273300 | Msa0060510:intron | 25.0% |
! | TTTAAATTAGGTAAAAAGGC+TGG | - | chr1_2:18273468-18273487 | Msa0060510:intron | 25.0% |
! | TGTAGTCTACAAAAGTTATT+TGG | + | chr1_2:18273498-18273517 | None:intergenic | 25.0% |
! | ATAAACTTCTCAAGTAAAAG+AGG | + | chr1_2:18273692-18273711 | None:intergenic | 25.0% |
! | CAGAAGATTTATCGAATATA+TGG | + | chr1_2:18273839-18273858 | None:intergenic | 25.0% |
! | ATGCATTTATATGACATACA+AGG | - | chr1_2:18273973-18273992 | Msa0060510:CDS | 25.0% |
! | ACATCACTACAAATTTACTT+TGG | + | chr1_2:18274502-18274521 | None:intergenic | 25.0% |
! | TCTACAGAATGTCTATTATT+TGG | + | chr1_2:18274548-18274567 | None:intergenic | 25.0% |
!!! | AACTTACACATTGTTTTTGT+TGG | + | chr1_2:18275276-18275295 | None:intergenic | 25.0% |
! | TGTTCAGCATATTATCATAA+CGG | + | chr1_2:18275341-18275360 | None:intergenic | 25.0% |
!! | ACTACAAATATTATGGCTTT+TGG | - | chr1_2:18275549-18275568 | Msa0060510:CDS | 25.0% |
!! | CTACAAATATTATGGCTTTT+GGG | - | chr1_2:18275550-18275569 | Msa0060510:CDS | 25.0% |
!! | CTATAGTAAAGAGATTTTAG+AGG | - | chr1_2:18275611-18275630 | Msa0060510:CDS | 25.0% |
!! | TATACCTCTTATTGTTTCTT+CGG | + | chr1_2:18275644-18275663 | None:intergenic | 25.0% |
!!! | AATCCTCTGAAATTGAAATT+TGG | + | chr1_2:18275872-18275891 | None:intergenic | 25.0% |
!! | TTTTCTTAATGTTTCAATGC+AGG | - | chr1_2:18276012-18276031 | Msa0060510:intron | 25.0% |
! | TGATGATCATAATAATCACA+GGG | + | chr1_2:18276310-18276329 | None:intergenic | 25.0% |
! | ATGATGATCATAATAATCAC+AGG | + | chr1_2:18276311-18276330 | None:intergenic | 25.0% |
! | TGTGATTATTATGATCATCA+TGG | - | chr1_2:18276310-18276329 | Msa0060510:exon | 25.0% |
! | GTGATTATTATGATCATCAT+GGG | - | chr1_2:18276311-18276330 | Msa0060510:exon | 25.0% |
! | AAATTAAATAGAGCAGCAAT+AGG | - | chr1_2:18276344-18276363 | Msa0060510:five_prime_UTR | 25.0% |
!! | GTGAATTGAATTTTGAGAGT+TGG | - | chr1_2:18268072-18268091 | Msa0060510:CDS | 30.0% |
GAAAGAGAATTGTGTAATTG+AGG | - | chr1_2:18268094-18268113 | Msa0060510:intron | 30.0% | |
AATAATACGCCGAAGAAAAA+CGG | - | chr1_2:18268150-18268169 | Msa0060510:intron | 30.0% | |
! | AATTGGATTAGGAAAATTCG+AGG | - | chr1_2:18268460-18268479 | Msa0060510:intron | 30.0% |
! | TATGCATACCTTTTGTAATG+GGG | - | chr1_2:18268716-18268735 | Msa0060510:CDS | 30.0% |
!! | TTGCTTTAGAAGGTAAAGTT+AGG | - | chr1_2:18268773-18268792 | Msa0060510:intron | 30.0% |
AAGGTAAAGTTAGGAATGTT+AGG | - | chr1_2:18268782-18268801 | Msa0060510:intron | 30.0% | |
ATGTACATGCATAACAAACA+CGG | - | chr1_2:18269039-18269058 | Msa0060510:CDS | 30.0% | |
! | TCCTGCATTAGCAAATTTTA+TGG | + | chr1_2:18269151-18269170 | None:intergenic | 30.0% |
! | AATCATGGAAACTAGTTTAG+AGG | - | chr1_2:18269540-18269559 | Msa0060510:CDS | 30.0% |
! | ATCATGGAAACTAGTTTAGA+GGG | - | chr1_2:18269541-18269560 | Msa0060510:CDS | 30.0% |
! | CAAGTCCTGGTAATAATTTT+TGG | + | chr1_2:18269612-18269631 | None:intergenic | 30.0% |
CAAAAATTATTACCAGGACT+TGG | - | chr1_2:18269610-18269629 | Msa0060510:CDS | 30.0% | |
AATTGAATGTTGTACCTACT+CGG | + | chr1_2:18269701-18269720 | None:intergenic | 30.0% | |
AGTTTAGCAATGGGATATAT+TGG | - | chr1_2:18269761-18269780 | Msa0060510:CDS | 30.0% | |
! | TTTGCTAGCTAATTTTTGCA+CGG | + | chr1_2:18269857-18269876 | None:intergenic | 30.0% |
CATTCTGCAATATGATACAA+GGG | + | chr1_2:18269904-18269923 | None:intergenic | 30.0% | |
TCATTCTGCAATATGATACA+AGG | + | chr1_2:18269905-18269924 | None:intergenic | 30.0% | |
! | AAACAAGAAAAGTATGGTTC+AGG | + | chr1_2:18270092-18270111 | None:intergenic | 30.0% |
AAGACGTTATCAAAACAGAA+AGG | - | chr1_2:18270187-18270206 | Msa0060510:intron | 30.0% | |
!! | TTTTAATTACAGGACCAGTT+GGG | - | chr1_2:18270324-18270343 | Msa0060510:intron | 30.0% |
AATGATTCTTTAAGTGCAGA+AGG | + | chr1_2:18270455-18270474 | None:intergenic | 30.0% | |
GATCATACATAGTTAAATGG+AGG | + | chr1_2:18270572-18270591 | None:intergenic | 30.0% | |
TATTATGCATAATTGAGCAG+AGG | + | chr1_2:18270770-18270789 | None:intergenic | 30.0% | |
! | CATGGCAAGAAACTTTAAAA+GGG | + | chr1_2:18270876-18270895 | None:intergenic | 30.0% |
TACACAGAAAACATGAATCT+GGG | + | chr1_2:18270951-18270970 | None:intergenic | 30.0% | |
ATACACAGAAAACATGAATC+TGG | + | chr1_2:18270952-18270971 | None:intergenic | 30.0% | |
! | AGCTTGCCTTTTCTATATTT+CGG | - | chr1_2:18271272-18271291 | Msa0060510:intron | 30.0% |
ACTTCATATTAGGCAAGAAA+CGG | + | chr1_2:18271306-18271325 | None:intergenic | 30.0% | |
AGCTAAATACCTAAGTATGA+GGG | + | chr1_2:18271426-18271445 | None:intergenic | 30.0% | |
TAGCTAAATACCTAAGTATG+AGG | + | chr1_2:18271427-18271446 | None:intergenic | 30.0% | |
AAAGGAAAAAAGCCACAAAA+TGG | + | chr1_2:18271801-18271820 | None:intergenic | 30.0% | |
TCTACTTAAGGATGATCTAA+AGG | + | chr1_2:18271819-18271838 | None:intergenic | 30.0% | |
! | TAGACTTCCAATTTTCAGAA+AGG | + | chr1_2:18271870-18271889 | None:intergenic | 30.0% |
AATAGCAACTTACTACAACT+AGG | + | chr1_2:18271942-18271961 | None:intergenic | 30.0% | |
!!! | TGTAGATTTTGAAGTAAGGA+GGG | - | chr1_2:18272119-18272138 | Msa0060510:intron | 30.0% |
ACTCAAAGTTGAAAACAAAG+TGG | + | chr1_2:18272387-18272406 | None:intergenic | 30.0% | |
ACTGCTATACTGATGTTTAT+AGG | + | chr1_2:18272528-18272547 | None:intergenic | 30.0% | |
AGATTCGTAAAAACAGAGAA+AGG | + | chr1_2:18272688-18272707 | None:intergenic | 30.0% | |
! | AATAAGCTTTTAATGTTGGC+TGG | - | chr1_2:18272908-18272927 | Msa0060510:intron | 30.0% |
TGTTAAAGAAGCTAAAGAGA+TGG | - | chr1_2:18273143-18273162 | Msa0060510:intron | 30.0% | |
! | TCCATTTTCCCTTCTTTTAA+GGG | + | chr1_2:18273596-18273615 | None:intergenic | 30.0% |
! | TTCCATTTTCCCTTCTTTTA+AGG | + | chr1_2:18273597-18273616 | None:intergenic | 30.0% |
AGTGAAATTTATGTCTTCTG+TGG | - | chr1_2:18273625-18273644 | Msa0060510:intron | 30.0% | |
! | CATAAACCACAACATTTTGT+AGG | + | chr1_2:18273933-18273952 | None:intergenic | 30.0% |
! | AACCATAACTCTTCAACTTT+TGG | - | chr1_2:18273997-18274016 | Msa0060510:intron | 30.0% |
ATCCAAAAGTTGAAGAGTTA+TGG | + | chr1_2:18274002-18274021 | None:intergenic | 30.0% | |
! | AAGAAAGTGCAGACATTATA+TGG | - | chr1_2:18274137-18274156 | Msa0060510:CDS | 30.0% |
! | ATTAGTTTGGATAACTCTGA+GGG | + | chr1_2:18274227-18274246 | None:intergenic | 30.0% |
! | AATTAGTTTGGATAACTCTG+AGG | + | chr1_2:18274228-18274247 | None:intergenic | 30.0% |
TAACTTAGATGTTCAGTGTA+TGG | - | chr1_2:18274343-18274362 | Msa0060510:intron | 30.0% | |
AACTTAGATGTTCAGTGTAT+GGG | - | chr1_2:18274344-18274363 | Msa0060510:intron | 30.0% | |
TCTGAGTTATATAGTTGTTC+TGG | - | chr1_2:18274446-18274465 | Msa0060510:CDS | 30.0% | |
ATAAATCACTTGATATGTCC+TGG | - | chr1_2:18274756-18274775 | Msa0060510:CDS | 30.0% | |
!! | TCTATTTTGAATTGCAGTCT+CGG | + | chr1_2:18274804-18274823 | None:intergenic | 30.0% |
ATTTCTCTTGGAGAAGATTT+GGG | + | chr1_2:18274983-18275002 | None:intergenic | 30.0% | |
TATTTCTCTTGGAGAAGATT+TGG | + | chr1_2:18274984-18275003 | None:intergenic | 30.0% | |
GTTCAGCATATTATCATAAC+GGG | + | chr1_2:18275340-18275359 | None:intergenic | 30.0% | |
GGCTTCTACTACAAATATTA+TGG | - | chr1_2:18275542-18275561 | Msa0060510:CDS | 30.0% | |
! | TTTTAACACCTTGTGAAATG+CGG | + | chr1_2:18275896-18275915 | None:intergenic | 30.0% |
TTAAAAAGATGAGGAAAGGA+AGG | - | chr1_2:18275910-18275929 | Msa0060510:CDS | 30.0% | |
TTATTTGAGCAGAGGTAAAA+TGG | - | chr1_2:18276049-18276068 | Msa0060510:intron | 30.0% | |
GATATATCATTGTTGTGTGA+AGG | - | chr1_2:18276086-18276105 | Msa0060510:intron | 30.0% | |
!!! | GCTTTGATTTTGTTGATGAT+TGG | - | chr1_2:18276255-18276274 | Msa0060510:CDS | 30.0% |
!!! | ATTTTGTTGATGATTGGCAT+AGG | - | chr1_2:18276261-18276280 | Msa0060510:CDS | 30.0% |
TTATTATGATCATCATGGGT+CGG | - | chr1_2:18276315-18276334 | Msa0060510:exon | 30.0% | |
AGGAATTAGGGTTCAATTTG+GGG | + | chr1_2:18267789-18267808 | None:intergenic | 35.0% | |
GAGGAATTAGGGTTCAATTT+GGG | + | chr1_2:18267790-18267809 | None:intergenic | 35.0% | |
TGAGGAATTAGGGTTCAATT+TGG | + | chr1_2:18267791-18267810 | None:intergenic | 35.0% | |
!! | TTGCGTTGATTAAATTACCC+TGG | + | chr1_2:18267954-18267973 | None:intergenic | 35.0% |
ATAATACGCCGAAGAAAAAC+GGG | - | chr1_2:18268151-18268170 | Msa0060510:intron | 35.0% | |
ACTGTGAGTTTGTGTAAGTT+GGG | - | chr1_2:18268379-18268398 | Msa0060510:intron | 35.0% | |
ACCTTACACAACGAAAAGAA+CGG | + | chr1_2:18268510-18268529 | None:intergenic | 35.0% | |
! | TGGTAGCTTGATTTGAGATA+AGG | - | chr1_2:18268675-18268694 | Msa0060510:CDS | 35.0% |
! | GCTTGATTTGAGATAAGGTT+AGG | - | chr1_2:18268680-18268699 | Msa0060510:CDS | 35.0% |
ACTCAAAACCCCATTACAAA+AGG | + | chr1_2:18268727-18268746 | None:intergenic | 35.0% | |
! | ATCAGTTGATGTATGAAGCA+CGG | - | chr1_2:18268827-18268846 | Msa0060510:intron | 35.0% |
TCTCAAATTACTAGCAGTGT+TGG | + | chr1_2:18268888-18268907 | None:intergenic | 35.0% | |
TATATGTGTCAGTGTTGTGT+TGG | - | chr1_2:18268930-18268949 | Msa0060510:CDS | 35.0% | |
CATCATCAACTTATGAAGCA+CGG | + | chr1_2:18269009-18269028 | None:intergenic | 35.0% | |
CTCACTTAAAGGGTAGAATA+AGG | + | chr1_2:18269073-18269092 | None:intergenic | 35.0% | |
!! | GCCATAAAATTTGCTAATGC+AGG | - | chr1_2:18269147-18269166 | Msa0060510:CDS | 35.0% |
ATGATACTTCATCTCTTGAC+TGG | - | chr1_2:18269170-18269189 | Msa0060510:CDS | 35.0% | |
! | TGGAGTGATTGGACATTTTT+GGG | - | chr1_2:18269190-18269209 | Msa0060510:CDS | 35.0% |
TTCTGGACTACAATCTACAA+TGG | + | chr1_2:18269224-18269243 | None:intergenic | 35.0% | |
!! | TAGCATCTTCCAGCTTTAAA+GGG | + | chr1_2:18269444-18269463 | None:intergenic | 35.0% |
! | TTAGCATCTTCCAGCTTTAA+AGG | + | chr1_2:18269445-18269464 | None:intergenic | 35.0% |
ATTACCAACAGTTGTGCAAA+GGG | + | chr1_2:18269523-18269542 | None:intergenic | 35.0% | |
! | TCATGGAAACTAGTTTAGAG+GGG | - | chr1_2:18269542-18269561 | Msa0060510:CDS | 35.0% |
AAATCATTGACACAAAGCTG+AGG | + | chr1_2:18269576-18269595 | None:intergenic | 35.0% | |
AAATTATTACCAGGACTTGG+AGG | - | chr1_2:18269613-18269632 | Msa0060510:CDS | 35.0% | |
GAAACTGAGTGAAATTAGTC+AGG | + | chr1_2:18269734-18269753 | None:intergenic | 35.0% | |
TAATTTCACTCAGTTTCCCT+CGG | - | chr1_2:18269737-18269756 | Msa0060510:CDS | 35.0% | |
! | TTGCTAGCTAATTTTTGCAC+GGG | + | chr1_2:18269856-18269875 | None:intergenic | 35.0% |
TTATAATCACCATCACCATC+TGG | + | chr1_2:18270242-18270261 | None:intergenic | 35.0% | |
! | TTTGAAGCATAGTCACAATC+AGG | + | chr1_2:18270269-18270288 | None:intergenic | 35.0% |
!! | CTTTTAATTACAGGACCAGT+TGG | - | chr1_2:18270323-18270342 | Msa0060510:intron | 35.0% |
TTTAATTACAGGACCAGTTG+GGG | - | chr1_2:18270325-18270344 | Msa0060510:intron | 35.0% | |
ATAATTCTACATACCCCAAC+TGG | + | chr1_2:18270341-18270360 | None:intergenic | 35.0% | |
! | AAAAGCACAACAGAAGACAT+GGG | + | chr1_2:18270533-18270552 | None:intergenic | 35.0% |
!! | TCTGTTGTGCTTTTGAGTAT+TGG | - | chr1_2:18270539-18270558 | Msa0060510:intron | 35.0% |
!! | CTGTTGTGCTTTTGAGTATT+GGG | - | chr1_2:18270540-18270559 | Msa0060510:intron | 35.0% |
CATACATAGTTAAATGGAGG+AGG | + | chr1_2:18270569-18270588 | None:intergenic | 35.0% | |
!! | GGTTTCTAGTGATAATACAC+TGG | - | chr1_2:18270626-18270645 | Msa0060510:CDS | 35.0% |
! | AAAGCACAAGCGGAAAATTT+TGG | + | chr1_2:18270707-18270726 | None:intergenic | 35.0% |
CTTGAATCTTGGTATTCTGA+AGG | - | chr1_2:18270812-18270831 | Msa0060510:CDS | 35.0% | |
CCATGGCAAGAAACTTTAAA+AGG | + | chr1_2:18270877-18270896 | None:intergenic | 35.0% | |
!!! | CCTTTTAAAGTTTCTTGCCA+TGG | - | chr1_2:18270874-18270893 | Msa0060510:CDS | 35.0% |
AAATACGTTCTACATAGCCA+TGG | + | chr1_2:18270894-18270913 | None:intergenic | 35.0% | |
ATATATGGTCAAGCATGCAT+AGG | - | chr1_2:18271208-18271227 | Msa0060510:intron | 35.0% | |
TGTCAAAATGTGTCCCAATT+TGG | + | chr1_2:18271244-18271263 | None:intergenic | 35.0% | |
AGTATACATAGACGTGCAAA+AGG | - | chr1_2:18271323-18271342 | Msa0060510:CDS | 35.0% | |
! | GCATATCAGCAGTAATTTGT+GGG | + | chr1_2:18271380-18271399 | None:intergenic | 35.0% |
AGCATATCAGCAGTAATTTG+TGG | + | chr1_2:18271381-18271400 | None:intergenic | 35.0% | |
TGAGGGTAGAAAAGATAACT+TGG | + | chr1_2:18271409-18271428 | None:intergenic | 35.0% | |
! | TCTTTTCTACCCTCATACTT+AGG | - | chr1_2:18271414-18271433 | Msa0060510:intron | 35.0% |
!! | GTGTCACTTCTTGATTCAAT+TGG | + | chr1_2:18271495-18271514 | None:intergenic | 35.0% |
!!! | TTTTGACGCTGTTTCTGAAA+AGG | + | chr1_2:18271628-18271647 | None:intergenic | 35.0% |
!! | AGTTGATGAAGGTCTACTTA+AGG | + | chr1_2:18271831-18271850 | None:intergenic | 35.0% |
! | ACCTTGTCCTTTCTGAAAAT+TGG | - | chr1_2:18271860-18271879 | Msa0060510:intron | 35.0% |
! | TCCAATTTTCAGAAAGGACA+AGG | + | chr1_2:18271864-18271883 | None:intergenic | 35.0% |
GCCTTAATTCATTAAGAAGC+AGG | - | chr1_2:18272007-18272026 | Msa0060510:intron | 35.0% | |
GCCTGCTTCTTAATGAATTA+AGG | + | chr1_2:18272011-18272030 | None:intergenic | 35.0% | |
AGATGGTGAAAACTAGGATT+AGG | - | chr1_2:18272070-18272089 | Msa0060510:intron | 35.0% | |
AAAACTAGGATTAGGTGGTT+TGG | - | chr1_2:18272078-18272097 | Msa0060510:intron | 35.0% | |
AAACTAGGATTAGGTGGTTT+GGG | - | chr1_2:18272079-18272098 | Msa0060510:intron | 35.0% | |
!!! | GACCTGTAGATTTTGAAGTA+AGG | - | chr1_2:18272115-18272134 | Msa0060510:intron | 35.0% |
CTCCTTACTTCAAAATCTAC+AGG | + | chr1_2:18272120-18272139 | None:intergenic | 35.0% | |
!!! | CTGTAGATTTTGAAGTAAGG+AGG | - | chr1_2:18272118-18272137 | Msa0060510:intron | 35.0% |
AGATCTAGAGATTAATGAGC+TGG | - | chr1_2:18272218-18272237 | Msa0060510:intron | 35.0% | |
! | AGAATCAGTTTTTGTCTGCA+TGG | + | chr1_2:18272357-18272376 | None:intergenic | 35.0% |
!! | AAGTAAGTGATGGATCCTTA+GGG | + | chr1_2:18272480-18272499 | None:intergenic | 35.0% |
!! | AAAGTAAGTGATGGATCCTT+AGG | + | chr1_2:18272481-18272500 | None:intergenic | 35.0% |
TTATAGGAAAGGAGACAACA+GGG | + | chr1_2:18272512-18272531 | None:intergenic | 35.0% | |
TTTATAGGAAAGGAGACAAC+AGG | + | chr1_2:18272513-18272532 | None:intergenic | 35.0% | |
AAACATCAGTATAGCAGTGT+TGG | - | chr1_2:18272530-18272549 | Msa0060510:intron | 35.0% | |
TATACTTCCTATTGAGGATC+AGG | + | chr1_2:18272584-18272603 | None:intergenic | 35.0% | |
TTGTCAACAGCTCAATACAT+CGG | - | chr1_2:18272755-18272774 | Msa0060510:intron | 35.0% | |
TTGGATCACAATGTGTCAAA+AGG | - | chr1_2:18272823-18272842 | Msa0060510:intron | 35.0% | |
TGCTCTATATCTCAGTTTAG+TGG | - | chr1_2:18273059-18273078 | Msa0060510:CDS | 35.0% | |
!!! | AATTGGTCCTTTTGCTGTTT+CGG | + | chr1_2:18273358-18273377 | None:intergenic | 35.0% |
CTGTTGCTGGTCAATATAAT+TGG | + | chr1_2:18273375-18273394 | None:intergenic | 35.0% | |
TTGTTAACGGTATGTGCTTT+AGG | - | chr1_2:18273561-18273580 | Msa0060510:intron | 35.0% | |
ATCTCTAACCCCTTAAAAGA+AGG | - | chr1_2:18273584-18273603 | Msa0060510:intron | 35.0% | |
TCTCTAACCCCTTAAAAGAA+GGG | - | chr1_2:18273585-18273604 | Msa0060510:intron | 35.0% | |
! | CCATTTTCCCTTCTTTTAAG+GGG | + | chr1_2:18273595-18273614 | None:intergenic | 35.0% |
CCATTGGGGAAAAGATAAAT+GGG | + | chr1_2:18274073-18274092 | None:intergenic | 35.0% | |
TCCATTGGGGAAAAGATAAA+TGG | + | chr1_2:18274074-18274093 | None:intergenic | 35.0% | |
! | TTATCTTTTCCCCAATGGAA+TGG | - | chr1_2:18274075-18274094 | Msa0060510:intron | 35.0% |
TACTACAAAAGATGATACCC+TGG | - | chr1_2:18274195-18274214 | Msa0060510:CDS | 35.0% | |
! | TTAGTTTGGATAACTCTGAG+GGG | + | chr1_2:18274226-18274245 | None:intergenic | 35.0% |
GACTTCGTTCTCAATTAGTT+TGG | + | chr1_2:18274240-18274259 | None:intergenic | 35.0% | |
! | TTCCATTGTAGCTATTGACT+TGG | + | chr1_2:18274264-18274283 | None:intergenic | 35.0% |
ACTTAGATGTTCAGTGTATG+GGG | - | chr1_2:18274345-18274364 | Msa0060510:intron | 35.0% | |
! | ATTGACTTTCAAACTCACCA+CGG | + | chr1_2:18274415-18274434 | None:intergenic | 35.0% |
! | AAATCTTGATTCTGGAAACC+AGG | + | chr1_2:18274777-18274796 | None:intergenic | 35.0% |
TCGGAAACAAATCTTGATTC+TGG | + | chr1_2:18274785-18274804 | None:intergenic | 35.0% | |
TTACTCAGAGAAACATCTAC+CGG | + | chr1_2:18274875-18274894 | None:intergenic | 35.0% | |
!! | AAATCTGGTGCTATTTCTCT+TGG | + | chr1_2:18274995-18275014 | None:intergenic | 35.0% |
ATGCTGTCATCACAAAAATC+TGG | + | chr1_2:18275010-18275029 | None:intergenic | 35.0% | |
! | AGATTTTTGTGATGACAGCA+TGG | - | chr1_2:18275009-18275028 | Msa0060510:intron | 35.0% |
!! | AAGTTGTTAAGCTTGCTAGT+GGG | - | chr1_2:18275206-18275225 | Msa0060510:intron | 35.0% |
TGATAATATGCTGAACATGC+AGG | - | chr1_2:18275344-18275363 | Msa0060510:intron | 35.0% | |
GATAATATGCTGAACATGCA+GGG | - | chr1_2:18275345-18275364 | Msa0060510:intron | 35.0% | |
AGACATAACTTCAGAGATGT+TGG | - | chr1_2:18275521-18275540 | Msa0060510:CDS | 35.0% | |
!! | TTTTGGGAAGTTATCTAGAC+AGG | - | chr1_2:18275566-18275585 | Msa0060510:CDS | 35.0% |
! | ACTATAGCTACTCATGGTTT+TGG | + | chr1_2:18275598-18275617 | None:intergenic | 35.0% |
CTCTTTACTATAGCTACTCA+TGG | + | chr1_2:18275604-18275623 | None:intergenic | 35.0% | |
TATTGCATGCTGCTAAATTG+AGG | + | chr1_2:18275738-18275757 | None:intergenic | 35.0% | |
! | CACAAGGTGTTAAAAAGATG+AGG | - | chr1_2:18275901-18275920 | Msa0060510:CDS | 35.0% |
GGTGTTAAAAAGATGAGGAA+AGG | - | chr1_2:18275906-18275925 | Msa0060510:CDS | 35.0% | |
TCTTAATGTTTCAATGCAGG+CGG | - | chr1_2:18276015-18276034 | Msa0060510:intron | 35.0% | |
CACAACAATGATATATCGTC+AGG | + | chr1_2:18276083-18276102 | None:intergenic | 35.0% | |
TATTATGATCATCATGGGTC+GGG | - | chr1_2:18276316-18276335 | Msa0060510:exon | 35.0% | |
GGAATTAGGGTTCAATTTGG+GGG | + | chr1_2:18267788-18267807 | None:intergenic | 40.0% | |
GTTCATGGTGTGAGGAATTA+GGG | + | chr1_2:18267801-18267820 | None:intergenic | 40.0% | |
TGTTCATGGTGTGAGGAATT+AGG | + | chr1_2:18267802-18267821 | None:intergenic | 40.0% | |
!! | CTGATTCGGTGAATTGACAT+CGG | + | chr1_2:18267831-18267850 | None:intergenic | 40.0% |
!! | TCAGCTACTGGTTTCTGATT+CGG | + | chr1_2:18267845-18267864 | None:intergenic | 40.0% |
! | TGTTGTTGTTGTTCAGCTAC+TGG | + | chr1_2:18267857-18267876 | None:intergenic | 40.0% |
GTAGCTGAACAACAACAACA+AGG | - | chr1_2:18267857-18267876 | Msa0060510:three_prime_UTR | 40.0% | |
!!! | CTCTTCTTGAAGGTGTTTTC+CGG | + | chr1_2:18267893-18267912 | None:intergenic | 40.0% |
! | AGGGGATTTTCTCTTCTTGA+AGG | + | chr1_2:18267903-18267922 | None:intergenic | 40.0% |
! | CGTTGATTAAATTACCCTGG+AGG | + | chr1_2:18267951-18267970 | None:intergenic | 40.0% |
!! | TTAACCGACCCGTTTTTCTT+CGG | + | chr1_2:18268162-18268181 | None:intergenic | 40.0% |
AAGAAAAACGGGTCGGTTAA+TGG | - | chr1_2:18268162-18268181 | Msa0060510:intron | 40.0% | |
GTTAATGGAGTTAAGGGAAC+TGG | - | chr1_2:18268177-18268196 | Msa0060510:intron | 40.0% | |
!! | TGGCTCGGAAAATTGATTTG+CGG | - | chr1_2:18268211-18268230 | Msa0060510:CDS | 40.0% |
!! | TCGGAAAATTGATTTGCGGT+TGG | - | chr1_2:18268215-18268234 | Msa0060510:CDS | 40.0% |
!! | GAAAATTGATTTGCGGTTGG+AGG | - | chr1_2:18268218-18268237 | Msa0060510:CDS | 40.0% |
GAGGTTAGTGTTCGATTCAT+CGG | - | chr1_2:18268255-18268274 | Msa0060510:CDS | 40.0% | |
! | TGTTCGATTCATCGGAGTTT+TGG | - | chr1_2:18268263-18268282 | Msa0060510:CDS | 40.0% |
GACTGTGAGTTTGTGTAAGT+TGG | - | chr1_2:18268378-18268397 | Msa0060510:intron | 40.0% | |
GGAAAATTCGAGGATGTTTG+CGG | - | chr1_2:18268470-18268489 | Msa0060510:intron | 40.0% | |
GAAAATTCGAGGATGTTTGC+GGG | - | chr1_2:18268471-18268490 | Msa0060510:intron | 40.0% | |
! | TCCGTTCTTTTCGTTGTGTA+AGG | - | chr1_2:18268506-18268525 | Msa0060510:CDS | 40.0% |
! | GTTCTTTTCGTTGTGTAAGG+TGG | - | chr1_2:18268509-18268528 | Msa0060510:CDS | 40.0% |
TGATGTATGAAGCACGGATA+CGG | - | chr1_2:18268833-18268852 | Msa0060510:intron | 40.0% | |
! | CTGGAGTGATTGGACATTTT+TGG | - | chr1_2:18269189-18269208 | Msa0060510:CDS | 40.0% |
TGGACTACAATCTACAATGG+TGG | + | chr1_2:18269221-18269240 | None:intergenic | 40.0% | |
! | AGACAAGGCATTCTGAGAAA+TGG | + | chr1_2:18269332-18269351 | None:intergenic | 40.0% |
ATCATGTGTTCTGACTGTGT+AGG | + | chr1_2:18269373-18269392 | None:intergenic | 40.0% | |
AGGGCATGTTTCTTTCTCAT+TGG | + | chr1_2:18269425-18269444 | None:intergenic | 40.0% | |
!! | AGAAACATGCCCTTTAAAGC+TGG | - | chr1_2:18269432-18269451 | Msa0060510:CDS | 40.0% |
AAAGCTGGAAGATGCTAAAG+TGG | - | chr1_2:18269447-18269466 | Msa0060510:CDS | 40.0% | |
TTACCAACAGTTGTGCAAAG+GGG | + | chr1_2:18269522-18269541 | None:intergenic | 40.0% | |
GATTACCAACAGTTGTGCAA+AGG | + | chr1_2:18269524-18269543 | None:intergenic | 40.0% | |
!! | TGCACAACTGTTGGTAATCA+TGG | - | chr1_2:18269525-18269544 | Msa0060510:CDS | 40.0% |
! | CATGGAAACTAGTTTAGAGG+GGG | - | chr1_2:18269543-18269562 | Msa0060510:CDS | 40.0% |
ATGAAGGCAGTACTGTATCA+GGG | - | chr1_2:18269639-18269658 | Msa0060510:CDS | 40.0% | |
CTGAGTGAAATTAGTCAGGT+CGG | + | chr1_2:18269730-18269749 | None:intergenic | 40.0% | |
CTGCCAAAGTTGTGAAGATA+AGG | - | chr1_2:18269932-18269951 | Msa0060510:CDS | 40.0% | |
! | CAGCCTTATCTTCACAACTT+TGG | + | chr1_2:18269938-18269957 | None:intergenic | 40.0% |
CAGAAAGGATTCCTCTAACA+AGG | - | chr1_2:18270202-18270221 | Msa0060510:intron | 40.0% | |
GTCAGTTTGATCCTTGTTAG+AGG | + | chr1_2:18270216-18270235 | None:intergenic | 40.0% | |
GATCAAACTGACATACCAGA+TGG | - | chr1_2:18270224-18270243 | Msa0060510:intron | 40.0% | |
TGCTTCAAAAGATGTTAGCG+AGG | - | chr1_2:18270280-18270299 | Msa0060510:intron | 40.0% | |
TTCAAAAGATGTTAGCGAGG+AGG | - | chr1_2:18270283-18270302 | Msa0060510:intron | 40.0% | |
TCAAAAGATGTTAGCGAGGA+GGG | - | chr1_2:18270284-18270303 | Msa0060510:intron | 40.0% | |
CAGAAGGTTCAAACGTGAAA+TGG | + | chr1_2:18270439-18270458 | None:intergenic | 40.0% | |
! | CAAAAGCACAACAGAAGACA+TGG | + | chr1_2:18270534-18270553 | None:intergenic | 40.0% |
AACCTCAAACCCTTGTTCTT+GGG | + | chr1_2:18271061-18271080 | None:intergenic | 40.0% | |
AAACCTCAAACCCTTGTTCT+TGG | + | chr1_2:18271062-18271081 | None:intergenic | 40.0% | |
!! | ACAAGGGTTTGAGGTTTTAG+AGG | - | chr1_2:18271065-18271084 | Msa0060510:intron | 40.0% |
! | GTAATTTGTGGGCGAGTAAA+CGG | + | chr1_2:18271369-18271388 | None:intergenic | 40.0% |
ACCTTTACCACCTTGCATAA+GGG | - | chr1_2:18271454-18271473 | Msa0060510:intron | 40.0% | |
! | GTTGATTAGTCCCTTATGCA+AGG | + | chr1_2:18271467-18271486 | None:intergenic | 40.0% |
! | ATCTTTTGGTCAGAGTGAGA+AGG | + | chr1_2:18271571-18271590 | None:intergenic | 40.0% |
TGCAAGCTACAATCAGAGTT+AGG | - | chr1_2:18271757-18271776 | Msa0060510:intron | 40.0% | |
! | CTGAGCTTGGTGAAACTTAT+AGG | + | chr1_2:18271894-18271913 | None:intergenic | 40.0% |
!! | TTCTCAATAAGTGCTGAGCT+TGG | + | chr1_2:18271907-18271926 | None:intergenic | 40.0% |
AGGCAGAATATAAGCAACAC+AGG | + | chr1_2:18271991-18272010 | None:intergenic | 40.0% | |
TGGTGAAAACTAGGATTAGG+TGG | - | chr1_2:18272073-18272092 | Msa0060510:intron | 40.0% | |
AGTAAGGAGGGTAGATAAGA+TGG | - | chr1_2:18272131-18272150 | Msa0060510:intron | 40.0% | |
! | AAGCCTTATCCCTTTAAGTG+GGG | + | chr1_2:18272299-18272318 | None:intergenic | 40.0% |
! | CAAGCCTTATCCCTTTAAGT+GGG | + | chr1_2:18272300-18272319 | None:intergenic | 40.0% |
! | ATCAGTTTTTGTCTGCATGG+AGG | + | chr1_2:18272354-18272373 | None:intergenic | 40.0% |
! | GCACTTTCTGCACTTTTAGA+GGG | + | chr1_2:18272426-18272445 | None:intergenic | 40.0% |
! | AGCACTTTCTGCACTTTTAG+AGG | + | chr1_2:18272427-18272446 | None:intergenic | 40.0% |
!!! | AAGTGCAGAAAGTGCTTTTG+TGG | - | chr1_2:18272431-18272450 | Msa0060510:intron | 40.0% |
!!! | GAAAGTGCTTTTGTGGAGTT+AGG | - | chr1_2:18272438-18272457 | Msa0060510:intron | 40.0% |
GTATCAAGAGTCATACCCTA+AGG | - | chr1_2:18272462-18272481 | Msa0060510:intron | 40.0% | |
TTTACTGCCTGATCCTCAAT+AGG | - | chr1_2:18272574-18272593 | Msa0060510:intron | 40.0% | |
! | ACTGCTGTCAAGCAGTATTT+TGG | - | chr1_2:18272792-18272811 | Msa0060510:intron | 40.0% |
!! | CAGTATTTTGGAGATGCTCT+TGG | - | chr1_2:18272804-18272823 | Msa0060510:intron | 40.0% |
TCTTTAACATTAGGCGAAGC+TGG | + | chr1_2:18273132-18273151 | None:intergenic | 40.0% | |
ATGATAACCCTATCCGATGA+TGG | - | chr1_2:18273183-18273202 | Msa0060510:intron | 40.0% | |
! | ATCCTTTTTCCTGAAGATCG+TGG | - | chr1_2:18273306-18273325 | Msa0060510:intron | 40.0% |
ATCCACGATCTTCAGGAAAA+AGG | + | chr1_2:18273311-18273330 | None:intergenic | 40.0% | |
TGTTTCGGCAATGTGTTGTA+TGG | + | chr1_2:18273343-18273362 | None:intergenic | 40.0% | |
ATATGCAAACTCACTGTTGC+TGG | + | chr1_2:18273388-18273407 | None:intergenic | 40.0% | |
! | GTTGCTTCGTCACTTGTTAA+CGG | - | chr1_2:18273548-18273567 | Msa0060510:intron | 40.0% |
CCCCTTAAAAGAAGGGAAAA+TGG | - | chr1_2:18273592-18273611 | Msa0060510:intron | 40.0% | |
GAATATCTCTGTCACAAGAC+TGG | + | chr1_2:18273715-18273734 | None:intergenic | 40.0% | |
! | CCCATTTATCTTTTCCCCAA+TGG | - | chr1_2:18274070-18274089 | Msa0060510:intron | 40.0% |
TTTCACCAAGCCATTCCATT+GGG | + | chr1_2:18274088-18274107 | None:intergenic | 40.0% | |
AATGTCTGCACTTTCTTGTC+TGG | + | chr1_2:18274134-18274153 | None:intergenic | 40.0% | |
! | CTCACTTCCTTTTGATCTTG+AGG | - | chr1_2:18274160-18274179 | Msa0060510:CDS | 40.0% |
AATGGAAAACCACTCAAGCT+GGG | - | chr1_2:18274277-18274296 | Msa0060510:intron | 40.0% | |
AGAGCTTTGCATCAATGAGA+AGG | - | chr1_2:18274316-18274335 | Msa0060510:intron | 40.0% | |
ATTAGATCTATTCCAGACCG+TGG | - | chr1_2:18274395-18274414 | Msa0060510:intron | 40.0% | |
! | ATATAGTTGTTCTGGACCCT+CGG | - | chr1_2:18274454-18274473 | Msa0060510:CDS | 40.0% |
ATCCTTATCCATAGCATCAG+TGG | + | chr1_2:18274525-18274544 | None:intergenic | 40.0% | |
AGAATCAGTGTTGCCTTCAA+GGG | + | chr1_2:18274600-18274619 | None:intergenic | 40.0% | |
AAGAATCAGTGTTGCCTTCA+AGG | + | chr1_2:18274601-18274620 | None:intergenic | 40.0% | |
!! | TTCTGGTTTGGAAGATTCAG+AGG | - | chr1_2:18274679-18274698 | Msa0060510:CDS | 40.0% |
TGACAAACGCTGAAAGAGAA+TGG | + | chr1_2:18274908-18274927 | None:intergenic | 40.0% | |
!! | TGTTGACTCTAGTCCATCTA+TGG | - | chr1_2:18275099-18275118 | Msa0060510:intron | 40.0% |
! | ACTGTATCGATCTCCATAGA+TGG | + | chr1_2:18275115-18275134 | None:intergenic | 40.0% |
TCGATACAGTGCAAAATGTG+TGG | - | chr1_2:18275125-18275144 | Msa0060510:intron | 40.0% | |
ATACAGTGCAAAATGTGTGG+AGG | - | chr1_2:18275128-18275147 | Msa0060510:intron | 40.0% | |
!! | GAAGTTGTTAAGCTTGCTAG+TGG | - | chr1_2:18275205-18275224 | Msa0060510:intron | 40.0% |
AAACGTCTCTTCATCAGACA+GGG | + | chr1_2:18275391-18275410 | None:intergenic | 40.0% | |
TAAACGTCTCTTCATCAGAC+AGG | + | chr1_2:18275392-18275411 | None:intergenic | 40.0% | |
CTGATGAAGAGACGTTTAGT+TGG | - | chr1_2:18275394-18275413 | Msa0060510:intron | 40.0% | |
ATGTCAACTGTTGCTGTACA+TGG | - | chr1_2:18275435-18275454 | Msa0060510:intron | 40.0% | |
!!! | GAAATTGGGTTTTGAGGACA+GGG | - | chr1_2:18275497-18275516 | Msa0060510:CDS | 40.0% |
ACGACCGAAGAAACAATAAG+AGG | - | chr1_2:18275637-18275656 | Msa0060510:CDS | 40.0% | |
ATCTTGCAGGAACAATGGAT+CGG | + | chr1_2:18275794-18275813 | None:intergenic | 40.0% | |
TGATGATCTTGCAGGAACAA+TGG | + | chr1_2:18275799-18275818 | None:intergenic | 40.0% | |
TCCTGCAAGATCATCAACAA+CGG | - | chr1_2:18275803-18275822 | Msa0060510:intron | 40.0% | |
GCGCCAAATTTCAATTTCAG+AGG | - | chr1_2:18275866-18275885 | Msa0060510:intron | 40.0% | |
GCTGAACATTATTTGAGCAG+AGG | - | chr1_2:18276041-18276060 | Msa0060510:intron | 40.0% | |
! | TTGATGATTGGCATAGGAGT+AGG | - | chr1_2:18276267-18276286 | Msa0060510:CDS | 40.0% |
GGGGTGGAATTGAGAAATTG+GGG | + | chr1_2:18267769-18267788 | None:intergenic | 45.0% | |
GGGGGTGGAATTGAGAAATT+GGG | + | chr1_2:18267770-18267789 | None:intergenic | 45.0% | |
TGGGGGTGGAATTGAGAAAT+TGG | + | chr1_2:18267771-18267790 | None:intergenic | 45.0% | |
ATTAGGGTTCAATTTGGGGG+TGG | + | chr1_2:18267785-18267804 | None:intergenic | 45.0% | |
! | TCGGTGAATTGACATCGGTT+GGG | + | chr1_2:18267826-18267845 | None:intergenic | 45.0% |
TTCGGTGAATTGACATCGGT+TGG | + | chr1_2:18267827-18267846 | None:intergenic | 45.0% | |
ACAACAAGGATCATGCACTC+CGG | - | chr1_2:18267871-18267890 | Msa0060510:three_prime_UTR | 45.0% | |
!! | TCCGAGGAGTGGATTTTGAA+GGG | + | chr1_2:18267922-18267941 | None:intergenic | 45.0% |
!! | TTCCGAGGAGTGGATTTTGA+AGG | + | chr1_2:18267923-18267942 | None:intergenic | 45.0% |
TCCTCGGAAAAAAACCTCCA+GGG | - | chr1_2:18267934-18267953 | Msa0060510:three_prime_UTR | 45.0% | |
GGGTCGGTTAATGGAGTTAA+GGG | - | chr1_2:18268171-18268190 | Msa0060510:intron | 45.0% | |
CAGTTTGTCTGCTGCTAAGA+GGG | - | chr1_2:18268566-18268585 | Msa0060510:CDS | 45.0% | |
GAGAGTGGAAGAACTAACTG+TGG | - | chr1_2:18268588-18268607 | Msa0060510:CDS | 45.0% | |
! | TGTCAGTGTTGTGTTGGTGT+CGG | - | chr1_2:18268936-18268955 | Msa0060510:CDS | 45.0% |
TGGGTGAGCTCTCACTTAAA+GGG | + | chr1_2:18269083-18269102 | None:intergenic | 45.0% | |
TGAGAGCTCACCCACTTTAT+TGG | - | chr1_2:18269089-18269108 | Msa0060510:CDS | 45.0% | |
CATCTCTTGACTGGAGTGAT+TGG | - | chr1_2:18269179-18269198 | Msa0060510:CDS | 45.0% | |
CTGAGAAATGGATGTGCTTG+AGG | + | chr1_2:18269320-18269339 | None:intergenic | 45.0% | |
! | TTGGCTAGAGCTGAGTTTTC+TGG | + | chr1_2:18269406-18269425 | None:intergenic | 45.0% |
TACCAACAGTTGTGCAAAGG+GGG | + | chr1_2:18269521-18269540 | None:intergenic | 45.0% | |
TTATTACCAGGACTTGGAGG+TGG | - | chr1_2:18269616-18269635 | Msa0060510:CDS | 45.0% | |
GATGAAGGCAGTACTGTATC+AGG | - | chr1_2:18269638-18269657 | Msa0060510:CDS | 45.0% | |
! | TGGCTCAGCATCTGATTTTC+TGG | + | chr1_2:18269678-18269697 | None:intergenic | 45.0% |
TGAATGTTGTACCTACTCGG+TGG | + | chr1_2:18269698-18269717 | None:intergenic | 45.0% | |
TTCCCTCGGTAGTTTAGCAA+TGG | - | chr1_2:18269751-18269770 | Msa0060510:CDS | 45.0% | |
TCCCTCGGTAGTTTAGCAAT+GGG | - | chr1_2:18269752-18269771 | Msa0060510:CDS | 45.0% | |
TCCCATTGCTAAACTACCGA+GGG | + | chr1_2:18269756-18269775 | None:intergenic | 45.0% | |
ATCCCATTGCTAAACTACCG+AGG | + | chr1_2:18269757-18269776 | None:intergenic | 45.0% | |
CAAGGGAAAACCTCACTATC+AGG | + | chr1_2:18269887-18269906 | None:intergenic | 45.0% | |
ATAAGGCTGAGAGCAGCTTA+TGG | - | chr1_2:18269949-18269968 | Msa0060510:CDS | 45.0% | |
CAAACCAACAAAAGCCTCAG+AGG | - | chr1_2:18269983-18270002 | Msa0060510:intron | 45.0% | |
CTAGAAATGTCAGACCTCTG+AGG | + | chr1_2:18270000-18270019 | None:intergenic | 45.0% | |
CCAGTCACGCAAGAAATTCA+GGG | + | chr1_2:18270150-18270169 | None:intergenic | 45.0% | |
ACCAGTCACGCAAGAAATTC+AGG | + | chr1_2:18270151-18270170 | None:intergenic | 45.0% | |
! | TGCGTGACTGGTTACATCAT+TGG | - | chr1_2:18270159-18270178 | Msa0060510:intron | 45.0% |
ACTGACATACCAGATGGTGA+TGG | - | chr1_2:18270230-18270249 | Msa0060510:intron | 45.0% | |
CAACTGTGACATACACTCGA+TGG | - | chr1_2:18270369-18270388 | Msa0060510:CDS | 45.0% | |
GAGTCTGTCATATTGCAGAG+TGG | - | chr1_2:18271009-18271028 | Msa0060510:CDS | 45.0% | |
TATGCTTGTGCCCAAGAACA+AGG | - | chr1_2:18271048-18271067 | Msa0060510:intron | 45.0% | |
ATGCTTGTGCCCAAGAACAA+GGG | - | chr1_2:18271049-18271068 | Msa0060510:intron | 45.0% | |
CACCTTTACCACCTTGCATA+AGG | - | chr1_2:18271453-18271472 | Msa0060510:intron | 45.0% | |
TCCCTTATGCAAGGTGGTAA+AGG | + | chr1_2:18271458-18271477 | None:intergenic | 45.0% | |
! | GATTAGTCCCTTATGCAAGG+TGG | + | chr1_2:18271464-18271483 | None:intergenic | 45.0% |
! | TGGTCAGAGTGAGAAGGTTT+TGG | + | chr1_2:18271565-18271584 | None:intergenic | 45.0% |
!! | TTCCTGCACTGACCATTTTG+TGG | - | chr1_2:18271786-18271805 | Msa0060510:intron | 45.0% |
! | AGCAGGCTTTCACTGTTTTC+AGG | - | chr1_2:18272024-18272043 | Msa0060510:intron | 45.0% |
! | GCAGGCTTTCACTGTTTTCA+GGG | - | chr1_2:18272025-18272044 | Msa0060510:intron | 45.0% |
AAGGAGGGTAGATAAGATGG+AGG | - | chr1_2:18272134-18272153 | Msa0060510:intron | 45.0% | |
AGGAGGGTAGATAAGATGGA+GGG | - | chr1_2:18272135-18272154 | Msa0060510:intron | 45.0% | |
GAGGGTAGTCAAATCACTAG+AGG | - | chr1_2:18272153-18272172 | Msa0060510:intron | 45.0% | |
AGTCAAATCACTAGAGGCAG+AGG | - | chr1_2:18272159-18272178 | Msa0060510:intron | 45.0% | |
!! | TTTAAGTGGGGTGGGCTATA+TGG | + | chr1_2:18272287-18272306 | None:intergenic | 45.0% |
ATATAGCCCACCCCACTTAA+AGG | - | chr1_2:18272286-18272305 | Msa0060510:intron | 45.0% | |
TATAGCCCACCCCACTTAAA+GGG | - | chr1_2:18272287-18272306 | Msa0060510:intron | 45.0% | |
CTTATCCCTTTAAGTGGGGT+GGG | + | chr1_2:18272295-18272314 | None:intergenic | 45.0% | |
! | CCAAGCCTTATCCCTTTAAG+TGG | + | chr1_2:18272301-18272320 | None:intergenic | 45.0% |
CCACTTAAAGGGATAAGGCT+TGG | - | chr1_2:18272298-18272317 | Msa0060510:intron | 45.0% | |
! | AGTTTTTGTCTGCATGGAGG+AGG | + | chr1_2:18272351-18272370 | None:intergenic | 45.0% |
!! | GCTTTTAATGTTGGCTGGAC+TGG | - | chr1_2:18272913-18272932 | Msa0060510:intron | 45.0% |
GAAGAAGGTCTCTTTCTCAG+TGG | + | chr1_2:18272955-18272974 | None:intergenic | 45.0% | |
ATGAGCTCCATCATCGGATA+GGG | + | chr1_2:18273193-18273212 | None:intergenic | 45.0% | |
GCAATACATCCACGATCTTC+AGG | + | chr1_2:18273318-18273337 | None:intergenic | 45.0% | |
CACATTGCCGAAACAGCAAA+AGG | - | chr1_2:18273348-18273367 | Msa0060510:intron | 45.0% | |
CGAAGCAACTCATCTGGAAA+TGG | + | chr1_2:18273537-18273556 | None:intergenic | 45.0% | |
AAGTGACGAAGCAACTCATC+TGG | + | chr1_2:18273543-18273562 | None:intergenic | 45.0% | |
!! | TTCGACGTTGACTTCTTCTG+TGG | + | chr1_2:18273669-18273688 | None:intergenic | 45.0% |
CCAGAACTGAAGATGCAGAA+TGG | + | chr1_2:18273744-18273763 | None:intergenic | 45.0% | |
CCATTCTGCATCTTCAGTTC+TGG | - | chr1_2:18273741-18273760 | Msa0060510:intron | 45.0% | |
! | TTTTCCCCAATGGAATGGCT+TGG | - | chr1_2:18274080-18274099 | Msa0060510:intron | 45.0% |
TTCACCAAGCCATTCCATTG+GGG | + | chr1_2:18274087-18274106 | None:intergenic | 45.0% | |
GTTTCACCAAGCCATTCCAT+TGG | + | chr1_2:18274089-18274108 | None:intergenic | 45.0% | |
! | CTTCCTTTTGATCTTGAGGC+TGG | - | chr1_2:18274164-18274183 | Msa0060510:CDS | 45.0% |
TGACCAGCCTCAAGATCAAA+AGG | + | chr1_2:18274170-18274189 | None:intergenic | 45.0% | |
CGCCAAGTCAATAGCTACAA+TGG | - | chr1_2:18274259-18274278 | Msa0060510:intron | 45.0% | |
CAATGGAAAACCACTCAAGC+TGG | - | chr1_2:18274276-18274295 | Msa0060510:intron | 45.0% | |
AAAACCACTCAAGCTGGGAA+GGG | - | chr1_2:18274282-18274301 | Msa0060510:intron | 45.0% | |
!! | AAGCTGGGAAGGGTTAGTTA+AGG | - | chr1_2:18274292-18274311 | Msa0060510:intron | 45.0% |
GGTAACATCCTCTTGGCAAA+AGG | - | chr1_2:18274475-18274494 | Msa0060510:CDS | 45.0% | |
! | ACTTTGGTCCTTTTGCCAAG+AGG | + | chr1_2:18274486-18274505 | None:intergenic | 45.0% |
AGTGATGTCCACTGATGCTA+TGG | - | chr1_2:18274514-18274533 | Msa0060510:intron | 45.0% | |
GTCCACTGATGCTATGGATA+AGG | - | chr1_2:18274520-18274539 | Msa0060510:intron | 45.0% | |
TACAAGAGACAGTCCCTTGA+AGG | - | chr1_2:18274584-18274603 | Msa0060510:intron | 45.0% | |
! | AGCTATGCCAGTACGTCTTT+TGG | - | chr1_2:18274644-18274663 | Msa0060510:intron | 45.0% |
TAGCTCACCAAAAGACGTAC+TGG | + | chr1_2:18274654-18274673 | None:intergenic | 45.0% | |
TTTGGTGAGCTACTGCATTC+TGG | - | chr1_2:18274662-18274681 | Msa0060510:intron | 45.0% | |
! | TGAGCTACTGCATTCTGGTT+TGG | - | chr1_2:18274667-18274686 | Msa0060510:CDS | 45.0% |
! | TGGTTTGGAAGATTCAGAGG+TGG | - | chr1_2:18274682-18274701 | Msa0060510:CDS | 45.0% |
GAGTCTACAGTTGTGTCTTC+TGG | - | chr1_2:18274833-18274852 | Msa0060510:CDS | 45.0% | |
TCTACAGTTGTGTCTTCTGG+TGG | - | chr1_2:18274836-18274855 | Msa0060510:CDS | 45.0% | |
AAACATCTACCGGACAAGCA+AGG | + | chr1_2:18274865-18274884 | None:intergenic | 45.0% | |
! | ATCTGGATCTTGAGGCACTT+TGG | + | chr1_2:18274939-18274958 | None:intergenic | 45.0% |
AGTGCCTCAAGATCCAGATT+TGG | - | chr1_2:18274940-18274959 | Msa0060510:CDS | 45.0% | |
ACCACCAAATCTGGATCTTG+AGG | + | chr1_2:18274947-18274966 | None:intergenic | 45.0% | |
TCAGTAGTCACCACCAAATC+TGG | + | chr1_2:18274956-18274975 | None:intergenic | 45.0% | |
! | GCTGAACATGCAGGGTATTA+TGG | - | chr1_2:18275353-18275372 | Msa0060510:intron | 45.0% |
TCTTCATCAGACAGGGAAGT+TGG | + | chr1_2:18275384-18275403 | None:intergenic | 45.0% | |
TGCCAAGCATATAGCAGAAG+CGG | - | chr1_2:18275470-18275489 | Msa0060510:intron | 45.0% | |
! | GGGATCGAAATTGGGTTTTG+AGG | - | chr1_2:18275491-18275510 | Msa0060510:intron | 45.0% |
!!! | CGAAATTGGGTTTTGAGGAC+AGG | - | chr1_2:18275496-18275515 | Msa0060510:intron | 45.0% |
!!! | AGCTACTCATGGTTTTGGTG+TGG | + | chr1_2:18275593-18275612 | None:intergenic | 45.0% |
GAGGATTTCCGCATTTCACA+AGG | - | chr1_2:18275885-18275904 | Msa0060510:CDS | 45.0% | |
!! | ATTAAAATAAAATTGAATTA+AGG | + | chr1_2:18272977-18272996 | None:intergenic | 5.0% |
! | GTTGGGTTGTTCATGGTGTG+AGG | + | chr1_2:18267809-18267828 | None:intergenic | 50.0% |
! | GACATCGGTTGGGTTGTTCA+TGG | + | chr1_2:18267816-18267835 | None:intergenic | 50.0% |
!! | CCGAGGAGTGGATTTTGAAG+GGG | + | chr1_2:18267921-18267940 | None:intergenic | 50.0% |
CCCCTTCAAAATCCACTCCT+CGG | - | chr1_2:18267918-18267937 | Msa0060510:three_prime_UTR | 50.0% | |
!!! | GGAGGTTTTTTTCCGAGGAG+TGG | + | chr1_2:18267933-18267952 | None:intergenic | 50.0% |
CTCCTCGGAAAAAAACCTCC+AGG | - | chr1_2:18267933-18267952 | Msa0060510:three_prime_UTR | 50.0% | |
!!! | ACCCTGGAGGTTTTTTTCCG+AGG | + | chr1_2:18267938-18267957 | None:intergenic | 50.0% |
TACGCCGAAGAAAAACGGGT+CGG | - | chr1_2:18268155-18268174 | Msa0060510:intron | 50.0% | |
CGGGTCGGTTAATGGAGTTA+AGG | - | chr1_2:18268170-18268189 | Msa0060510:intron | 50.0% | |
! | TCAATTTTCCGAGCCACGTC+AGG | + | chr1_2:18268207-18268226 | None:intergenic | 50.0% |
GCAGTTTGTCTGCTGCTAAG+AGG | - | chr1_2:18268565-18268584 | Msa0060510:CDS | 50.0% | |
GTGGGTGAGCTCTCACTTAA+AGG | + | chr1_2:18269084-18269103 | None:intergenic | 50.0% | |
AACAGTTGTGCAAAGGGGGA+AGG | + | chr1_2:18269517-18269536 | None:intergenic | 50.0% | |
TTCCCCCTTTGCACAACTGT+TGG | - | chr1_2:18269516-18269535 | Msa0060510:CDS | 50.0% | |
!!! | CAGACCTCTGAGGCTTTTGT+TGG | + | chr1_2:18269990-18270009 | None:intergenic | 50.0% |
CCCTGAATTTCTTGCGTGAC+TGG | - | chr1_2:18270147-18270166 | Msa0060510:intron | 50.0% | |
TGCCCAAGAACAAGGGTTTG+AGG | - | chr1_2:18271056-18271075 | Msa0060510:intron | 50.0% | |
AGCCACAAAATGGTCAGTGC+AGG | + | chr1_2:18271791-18271810 | None:intergenic | 50.0% | |
CCTTATCCCTTTAAGTGGGG+TGG | + | chr1_2:18272296-18272315 | None:intergenic | 50.0% | |
CCACCCCACTTAAAGGGATA+AGG | - | chr1_2:18272293-18272312 | Msa0060510:intron | 50.0% | |
AAATGATGTGGCGTGCGTCT+TGG | - | chr1_2:18272609-18272628 | Msa0060510:intron | 50.0% | |
!! | AATGTTGGCTGGACTGGTTC+TGG | - | chr1_2:18272919-18272938 | Msa0060510:intron | 50.0% |
CATGAGCTCCATCATCGGAT+AGG | + | chr1_2:18273194-18273213 | None:intergenic | 50.0% | |
!! | CTATCCGATGATGGAGCTCA+TGG | - | chr1_2:18273192-18273211 | Msa0060510:intron | 50.0% |
AGGACCATGAGCTCCATCAT+CGG | + | chr1_2:18273199-18273218 | None:intergenic | 50.0% | |
!! | AACTTCTGAGACGTTCCACC+AGG | + | chr1_2:18273219-18273238 | None:intergenic | 50.0% |
CGACGGCCTACAAAATGTTG+TGG | - | chr1_2:18273924-18273943 | Msa0060510:CDS | 50.0% | |
! | AACTCTGAGGGGAAACTCCA+GGG | + | chr1_2:18274215-18274234 | None:intergenic | 50.0% |
! | TAACTCTGAGGGGAAACTCC+AGG | + | chr1_2:18274216-18274235 | None:intergenic | 50.0% |
GAAAACCACTCAAGCTGGGA+AGG | - | chr1_2:18274281-18274300 | Msa0060510:intron | 50.0% | |
CTTTCAAACTCACCACGGTC+TGG | + | chr1_2:18274410-18274429 | None:intergenic | 50.0% | |
TGCCAAGAGGATGTTACCGA+GGG | + | chr1_2:18274473-18274492 | None:intergenic | 50.0% | |
TTGCCAAGAGGATGTTACCG+AGG | + | chr1_2:18274474-18274493 | None:intergenic | 50.0% | |
TTTCAGCGTTTGTCAGCGCT+TGG | - | chr1_2:18274913-18274932 | Msa0060510:CDS | 50.0% | |
GCCTCAAGATCCAGATTTGG+TGG | - | chr1_2:18274943-18274962 | Msa0060510:CDS | 50.0% | |
AGTGACTGCACTCATCCATC+GGG | + | chr1_2:18275054-18275073 | None:intergenic | 50.0% | |
GAGTGACTGCACTCATCCAT+CGG | + | chr1_2:18275055-18275074 | None:intergenic | 50.0% | |
TCATCAGACAGGGAAGTTGG+AGG | + | chr1_2:18275381-18275400 | None:intergenic | 50.0% | |
GCCAAGCATATAGCAGAAGC+GGG | - | chr1_2:18275471-18275490 | Msa0060510:intron | 50.0% | |
TCCCGCTTCTGCTATATGCT+TGG | + | chr1_2:18275475-18275494 | None:intergenic | 50.0% | |
AGCAGAAGCGGGATCGAAAT+TGG | - | chr1_2:18275482-18275501 | Msa0060510:intron | 50.0% | |
GCAGAAGCGGGATCGAAATT+GGG | - | chr1_2:18275483-18275502 | Msa0060510:intron | 50.0% | |
!! | GCCGTTGTTGATGATCTTGC+AGG | + | chr1_2:18275807-18275826 | None:intergenic | 50.0% |
TTCACAGTATGCTGCTAGCG+TGG | - | chr1_2:18276130-18276149 | Msa0060510:intron | 50.0% | |
GGAGGCGAAATTGTCAGCTG+AGG | - | chr1_2:18268236-18268255 | Msa0060510:CDS | 55.0% | |
TCTGCTGCTAAGAGGGAGAG+TGG | - | chr1_2:18268573-18268592 | Msa0060510:CDS | 55.0% | |
TGAAGCACGGATACGGACAC+CGG | - | chr1_2:18268840-18268859 | Msa0060510:intron | 55.0% | |
GTCAGTGTCCATGTCGTGTC+CGG | + | chr1_2:18268862-18268881 | None:intergenic | 55.0% | |
CACAACCACGTGTCTGACAC+CGG | - | chr1_2:18268960-18268979 | Msa0060510:CDS | 55.0% | |
ACAACCACGTGTCTGACACC+GGG | - | chr1_2:18268961-18268980 | Msa0060510:CDS | 55.0% | |
TCCTCGAATTAGGCGTGTCC+CGG | + | chr1_2:18268982-18269001 | None:intergenic | 55.0% | |
GCACGGACACTCCTCGAATT+AGG | + | chr1_2:18268992-18269011 | None:intergenic | 55.0% | |
CTTCATCCACCTCCAAGTCC+TGG | + | chr1_2:18269625-18269644 | None:intergenic | 55.0% | |
CAGGACTTGGAGGTGGATGA+AGG | - | chr1_2:18269623-18269642 | Msa0060510:CDS | 55.0% | |
CTAGAGGCAGAGGAAGACGT+AGG | - | chr1_2:18272169-18272188 | Msa0060510:intron | 55.0% | |
CATTAGGCGAAGCTGGAGCT+TGG | + | chr1_2:18273125-18273144 | None:intergenic | 55.0% | |
!! | GATGATGGAGCTCATGGTCC+TGG | - | chr1_2:18273198-18273217 | Msa0060510:intron | 55.0% |
GTCTTCTGTGGACAACCTGC+AGG | - | chr1_2:18273637-18273656 | Msa0060510:intron | 55.0% | |
CTAACCCTTCCCAGCTTGAG+TGG | + | chr1_2:18274289-18274308 | None:intergenic | 55.0% | |
GACCCTCGGTAACATCCTCT+TGG | - | chr1_2:18274468-18274487 | Msa0060510:CDS | 55.0% | |
! | TGGTGGACACCTTGCTTGTC+CGG | - | chr1_2:18274853-18274872 | Msa0060510:CDS | 55.0% |
CGCAGCTGTGTATAACCCGA+TGG | - | chr1_2:18275036-18275055 | Msa0060510:intron | 55.0% | |
CATGCCAGCTCAGAACAGAC+AGG | - | chr1_2:18275175-18275194 | Msa0060510:intron | 55.0% | |
! | AGCACCTGTCTGTTCTGAGC+TGG | + | chr1_2:18275182-18275201 | None:intergenic | 55.0% |
TACGGACACCGGACACGACA+TGG | - | chr1_2:18268851-18268870 | Msa0060510:CDS | 60.0% | |
ACCGGGACACGCCTAATTCG+AGG | - | chr1_2:18268978-18268997 | Msa0060510:CDS | 60.0% | |
CAGATGCTGAGCCACCGAGT+AGG | - | chr1_2:18269684-18269703 | Msa0060510:CDS | 60.0% | |
GATGGAGCTCATGGTCCTGG+TGG | - | chr1_2:18273201-18273220 | Msa0060510:intron | 60.0% | |
CTTCTGTGGCGCAAACCTGC+AGG | + | chr1_2:18273655-18273674 | None:intergenic | 60.0% | |
!! | GGGAACTGGTTCGCCTGACG+TGG | - | chr1_2:18268191-18268210 | Msa0060510:intron | 65.0% |
! | CTGGTTCGCCTGACGTGGCT+CGG | - | chr1_2:18268196-18268215 | Msa0060510:intron | 65.0% |
! | GTGTCCCGGTGTCAGACACG+TGG | + | chr1_2:18268968-18268987 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 18267740 | 18276395 | 18267740 | ID=Msa0060510;Name=Msa0060510 |
chr1_2 | mRNA | 18267740 | 18276395 | 18267740 | ID=Msa0060510-mRNA-1;Parent=Msa0060510;Name=Msa0060510-mRNA-1;_AED=0.07;_eAED=0.07;_QI=75|1|1|1|1|1|16|226|1182 |
chr1_2 | exon | 18267740 | 18268101 | 18267740 | ID=Msa0060510-mRNA-1:exon:7094;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18268204 | 18268386 | 18268204 | ID=Msa0060510-mRNA-1:exon:7093;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18268477 | 18268769 | 18268477 | ID=Msa0060510-mRNA-1:exon:7092;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18268847 | 18270000 | 18268847 | ID=Msa0060510-mRNA-1:exon:7091;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18270347 | 18270476 | 18270347 | ID=Msa0060510-mRNA-1:exon:7090;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18270566 | 18270657 | 18270566 | ID=Msa0060510-mRNA-1:exon:7089;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18270742 | 18271061 | 18270742 | ID=Msa0060510-mRNA-1:exon:7088;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18271291 | 18271370 | 18271291 | ID=Msa0060510-mRNA-1:exon:7087;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18273049 | 18273108 | 18273049 | ID=Msa0060510-mRNA-1:exon:7086;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18273789 | 18274007 | 18273789 | ID=Msa0060510-mRNA-1:exon:7085;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18274131 | 18274215 | 18274131 | ID=Msa0060510-mRNA-1:exon:7084;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18274430 | 18274509 | 18274430 | ID=Msa0060510-mRNA-1:exon:7083;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18274667 | 18274966 | 18274667 | ID=Msa0060510-mRNA-1:exon:7082;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18275497 | 18275664 | 18275497 | ID=Msa0060510-mRNA-1:exon:7081;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18275878 | 18275985 | 18275878 | ID=Msa0060510-mRNA-1:exon:7080;Parent=Msa0060510-mRNA-1 |
chr1_2 | exon | 18276180 | 18276395 | 18276180 | ID=Msa0060510-mRNA-1:exon:7079;Parent=Msa0060510-mRNA-1 |
chr1_2 | five_prime_UTR | 18276321 | 18276395 | 18276321 | ID=Msa0060510-mRNA-1:five_prime_utr;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18276180 | 18276320 | 18276180 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18275878 | 18275985 | 18275878 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18275497 | 18275664 | 18275497 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18274667 | 18274966 | 18274667 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18274430 | 18274509 | 18274430 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18274131 | 18274215 | 18274131 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18273789 | 18274007 | 18273789 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18273049 | 18273108 | 18273049 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18271291 | 18271370 | 18271291 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18270742 | 18271061 | 18270742 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18270566 | 18270657 | 18270566 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18270347 | 18270476 | 18270347 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18268847 | 18270000 | 18268847 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18268477 | 18268769 | 18268477 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18268204 | 18268386 | 18268204 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | CDS | 18267966 | 18268101 | 18267966 | ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1 |
chr1_2 | three_prime_UTR | 18267740 | 18267965 | 18267740 | ID=Msa0060510-mRNA-1:three_prime_utr;Parent=Msa0060510-mRNA-1 |
Gene Sequence |
Protein sequence |