AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0060510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060510 MtrunA17_Chr1g0160121 93.486 1182 73 1 1 1182 1 1178 0.0 2295
Msa0060510 MtrunA17_Chr3g0114611 54.281 1168 471 16 25 1172 70 1194 0.0 1106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060510 AT1G77620.1 32.924 1221 669 38 4 1168 23 1149 4.28e-139 451

Find 244 sgRNAs with CRISPR-Local

Find 585 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAAGTTATCAAAATTTA+AGG 0.124385 1_2:+18274832 None:intergenic
TCTACAGAATGTCTATTATT+TGG 0.163033 1_2:+18269568 None:intergenic
TTAGCATCTTCCAGCTTTAA+AGG 0.193872 1_2:+18274671 None:intergenic
CTTAGATTTCATTTGATAAT+AGG 0.199465 1_2:-18267930 Msa0060510:three_prime_UTR
AGCAGAAGCGGGATCGAAAT+TGG 0.212669 1_2:-18268631 Msa0060510:CDS
GGCTTCTACTACAAATATTA+TGG 0.214892 1_2:-18268571 Msa0060510:CDS
ACTGCTGTCAAGCAGTATTT+TGG 0.216334 1_2:-18271321 Msa0060510:CDS
TGTTCATGGTGTGAGGAATT+AGG 0.220415 1_2:+18276314 None:intergenic
ACTACAAATATTATGGCTTT+TGG 0.229067 1_2:-18268564 Msa0060510:CDS
GCTGAACATGCAGGGTATTA+TGG 0.230458 1_2:-18268760 Msa0060510:intron
TAAGGTGGAAAAGAAATTTA+AGG 0.235150 1_2:-18275589 Msa0060510:CDS
AATCCTCTGAAATTGAAATT+TGG 0.243694 1_2:+18268244 None:intergenic
TTTGGTGAGCTACTGCATTC+TGG 0.246063 1_2:-18269451 Msa0060510:CDS
ACCAGTCACGCAAGAAATTC+AGG 0.253423 1_2:+18273965 None:intergenic
TTTGATATATATTGGGATTT+GGG 0.255321 1_2:+18276372 None:intergenic
TGTAGTCTACAAAAGTTATT+TGG 0.257206 1_2:+18270618 None:intergenic
GAGGAATTAGGGTTCAATTT+GGG 0.264700 1_2:+18276326 None:intergenic
TTAGATTTCATTTGATAATA+GGG 0.268450 1_2:-18267929 Msa0060510:three_prime_UTR
TGAGGAATTAGGGTTCAATT+TGG 0.277034 1_2:+18276325 None:intergenic
CCATTCTGCATCTTCAGTTC+TGG 0.277127 1_2:-18270372 Msa0060510:CDS
TATTTCTCTTGGAGAAGATT+TGG 0.284568 1_2:+18269132 None:intergenic
TCGGAAACAAATCTTGATTC+TGG 0.296800 1_2:+18269331 None:intergenic
TCTGAGTTATATAGTTGTTC+TGG 0.300439 1_2:-18269667 Msa0060510:CDS
ACTATAGCTACTCATGGTTT+TGG 0.301974 1_2:+18268518 None:intergenic
AAACCTCAAACCCTTGTTCT+TGG 0.302769 1_2:+18273054 None:intergenic
GATGAAGGCAGTACTGTATC+AGG 0.309635 1_2:-18274475 Msa0060510:CDS
GTTCATGGTGTGAGGAATTA+GGG 0.314446 1_2:+18276315 None:intergenic
AAGAAAGTGCAGACATTATA+TGG 0.315116 1_2:-18269976 Msa0060510:CDS
TTATTTGAGCAGAGGTAAAA+TGG 0.324209 1_2:-18268064 Msa0060510:CDS
ATCCACGATCTTCAGGAAAA+AGG 0.325167 1_2:+18270805 None:intergenic
TATACCTCTTATTGTTTCTT+CGG 0.328972 1_2:+18268472 None:intergenic
GACTTCGTTCTCAATTAGTT+TGG 0.333349 1_2:+18269876 None:intergenic
AGCTATGCCAGTACGTCTTT+TGG 0.333721 1_2:-18269469 Msa0060510:CDS
TGTTGACTCTAGTCCATCTA+TGG 0.335603 1_2:-18269014 Msa0060510:CDS
TAATTAAAAGAACATTCTTC+AGG 0.338128 1_2:+18273803 None:intergenic
GAGTCTACAGTTGTGTCTTC+TGG 0.342872 1_2:-18269280 Msa0060510:CDS
TCAGTAGTCACCACCAAATC+TGG 0.343163 1_2:+18269160 None:intergenic
GGAAAAGAAATTTAAGGATT+CGG 0.344345 1_2:-18275583 Msa0060510:CDS
ATTTCTCTTGGAGAAGATTT+GGG 0.344875 1_2:+18269133 None:intergenic
GAAAAGAAATTTAAGGATTC+GGG 0.348265 1_2:-18275582 Msa0060510:CDS
CCCTGAATTTCTTGCGTGAC+TGG 0.351843 1_2:-18273966 Msa0060510:CDS
TCATGTATTTGAAGATATTA+CGG 0.359838 1_2:-18275496 Msa0060510:intron
TGTTGTTGTTGTTCAGCTAC+TGG 0.375512 1_2:+18276259 None:intergenic
CTGTTGCTGGTCAATATAAT+TGG 0.375579 1_2:+18270741 None:intergenic
GTCAGTTTGATCCTTGTTAG+AGG 0.378622 1_2:+18273900 None:intergenic
CATCTCTTGACTGGAGTGAT+TGG 0.380843 1_2:-18274934 Msa0060510:CDS
TTTGATTCAATAGAAAGTTA+AGG 0.382479 1_2:+18269491 None:intergenic
AACCTCAAACCCTTGTTCTT+GGG 0.386304 1_2:+18273055 None:intergenic
TAACTTAGATGTTCAGTGTA+TGG 0.388265 1_2:-18269770 Msa0060510:CDS
GCAATACATCCACGATCTTC+AGG 0.389679 1_2:+18270798 None:intergenic
ATATCTTCAAATACATGAAT+AGG 0.393586 1_2:+18275501 None:intergenic
TGAGCTACTGCATTCTGGTT+TGG 0.393661 1_2:-18269446 Msa0060510:CDS
TAGCATCTTCCAGCTTTAAA+GGG 0.397601 1_2:+18274672 None:intergenic
TGCGTGACTGGTTACATCAT+TGG 0.404069 1_2:-18273954 Msa0060510:CDS
TCTTTAGCTTCTTTAACATT+AGG 0.404506 1_2:+18270975 None:intergenic
GCCGTTGTTGATGATCTTGC+AGG 0.405319 1_2:+18268309 None:intergenic
GTTGCTTCGTCACTTGTTAA+CGG 0.406105 1_2:-18270565 Msa0060510:intron
TTGATTCAATAGAAAGTTAA+GGG 0.406538 1_2:+18269492 None:intergenic
TCAGCTACTGGTTTCTGATT+CGG 0.407682 1_2:+18276271 None:intergenic
ATAAGGCTGAGAGCAGCTTA+TGG 0.408031 1_2:-18274164 Msa0060510:CDS
TGGTGGACACCTTGCTTGTC+CGG 0.410037 1_2:-18269260 Msa0060510:CDS
TTCGGTGAATTGACATCGGT+TGG 0.410937 1_2:+18276289 None:intergenic
AGACAAGGCATTCTGAGAAA+TGG 0.412315 1_2:+18274784 None:intergenic
CTTTCAAACTCACCACGGTC+TGG 0.412982 1_2:+18269706 None:intergenic
AGGGCATGTTTCTTTCTCAT+TGG 0.415987 1_2:+18274691 None:intergenic
TGCTCTATATCTCAGTTTAG+TGG 0.416926 1_2:-18271054 Msa0060510:intron
AAATCTGGTGCTATTTCTCT+TGG 0.417438 1_2:+18269121 None:intergenic
TCTTTAACATTAGGCGAAGC+TGG 0.426037 1_2:+18270984 None:intergenic
TACAAGAGACAGTCCCTTGA+AGG 0.430502 1_2:-18269529 Msa0060510:CDS
CTGCCAAAGTTGTGAAGATA+AGG 0.431284 1_2:-18274181 Msa0060510:CDS
AAGAATCAGTGTTGCCTTCA+AGG 0.431318 1_2:+18269515 None:intergenic
ATCTGGATCTTGAGGCACTT+TGG 0.434126 1_2:+18269177 None:intergenic
AGAAAGTTATCAAAATTTAA+GGG 0.434763 1_2:+18274833 None:intergenic
ATATGCAAACTCACTGTTGC+TGG 0.434866 1_2:+18270728 None:intergenic
TTTGAAGCATAGTCACAATC+AGG 0.436058 1_2:+18273847 None:intergenic
AAATTAAATAGAGCAGCAAT+AGG 0.447176 1_2:-18267769 Msa0060510:three_prime_UTR
GTTAATGGAGTTAAGGGAAC+TGG 0.451103 1_2:-18275936 Msa0060510:CDS
CAGCCTTATCTTCACAACTT+TGG 0.452105 1_2:+18274178 None:intergenic
CGAAGCAACTCATCTGGAAA+TGG 0.454693 1_2:+18270579 None:intergenic
CGGGTCGGTTAATGGAGTTA+AGG 0.454889 1_2:-18275943 Msa0060510:CDS
TTTCAGCGTTTGTCAGCGCT+TGG 0.454940 1_2:-18269200 Msa0060510:CDS
GCAGAAGCGGGATCGAAATT+GGG 0.455545 1_2:-18268630 Msa0060510:CDS
CTCTTTACTATAGCTACTCA+TGG 0.455923 1_2:+18268512 None:intergenic
CAATGGAAAACCACTCAAGC+TGG 0.456812 1_2:-18269837 Msa0060510:CDS
TATTATGATCATCATGGGTC+GGG 0.459271 1_2:-18267797 Msa0060510:three_prime_UTR
GAAAATTCGAGGATGTTTGC+GGG 0.467912 1_2:-18275642 Msa0060510:CDS
GACATCGGTTGGGTTGTTCA+TGG 0.468678 1_2:+18276300 None:intergenic
AACTTAGATGTTCAGTGTAT+GGG 0.468798 1_2:-18269769 Msa0060510:CDS
GAAAATTGATTTGCGGTTGG+AGG 0.469124 1_2:-18275895 Msa0060510:CDS
TCCCGCTTCTGCTATATGCT+TGG 0.471742 1_2:+18268641 None:intergenic
GGGTCGGTTAATGGAGTTAA+GGG 0.472590 1_2:-18275942 Msa0060510:CDS
TTGGATCACAATGTGTCAAA+AGG 0.473045 1_2:-18271290 Msa0060510:intron
AGTGCCTCAAGATCCAGATT+TGG 0.473131 1_2:-18269173 Msa0060510:CDS
TGACCAGCCTCAAGATCAAA+AGG 0.474195 1_2:+18269946 None:intergenic
AAAATATGTTAAAGAATGAA+TGG 0.474521 1_2:+18267906 None:intergenic
AAGTGACGAAGCAACTCATC+TGG 0.476047 1_2:+18270573 None:intergenic
AGGAATTAGGGTTCAATTTG+GGG 0.476347 1_2:+18276327 None:intergenic
CATTAGGCGAAGCTGGAGCT+TGG 0.479606 1_2:+18270991 None:intergenic
GGAAAATTCGAGGATGTTTG+CGG 0.482351 1_2:-18275643 Msa0060510:CDS
TCTTCATCAGACAGGGAAGT+TGG 0.482991 1_2:+18268732 None:intergenic
ATGTCAACTGTTGCTGTACA+TGG 0.483504 1_2:-18268678 Msa0060510:CDS
ATAATTCTACATACCCCAAC+TGG 0.483632 1_2:+18273775 None:intergenic
TGTGATTATTATGATCATCA+TGG 0.487575 1_2:-18267803 Msa0060510:three_prime_UTR
CTGGTTCGCCTGACGTGGCT+CGG 0.491132 1_2:-18275917 Msa0060510:CDS
ACATCACTACAAATTTACTT+TGG 0.491579 1_2:+18269614 None:intergenic
CAGTTTGTCTGCTGCTAAGA+GGG 0.493510 1_2:-18275547 Msa0060510:CDS
AGAAACATGCCCTTTAAAGC+TGG 0.495333 1_2:-18274681 Msa0060510:CDS
AAATGTAAGTGTATTATCAA+TGG 0.497253 1_2:+18270869 None:intergenic
TGTTTCGGCAATGTGTTGTA+TGG 0.497684 1_2:+18270773 None:intergenic
ATAAATCACTTGATATGTCC+TGG 0.499529 1_2:-18269357 Msa0060510:CDS
GGTAACATCCTCTTGGCAAA+AGG 0.500082 1_2:-18269638 Msa0060510:CDS
CACAACAATGATATATCGTC+AGG 0.500190 1_2:+18268033 None:intergenic
TGCCCAAGAACAAGGGTTTG+AGG 0.503673 1_2:-18273057 Msa0060510:CDS
TTCCATTGTAGCTATTGACT+TGG 0.505558 1_2:+18269852 None:intergenic
AGACATAACTTCAGAGATGT+TGG 0.505661 1_2:-18268592 Msa0060510:CDS
TTGATGATTGGCATAGGAGT+AGG 0.506674 1_2:-18267846 Msa0060510:three_prime_UTR
TAACTCTGAGGGGAAACTCC+AGG 0.512348 1_2:+18269900 None:intergenic
GCAGTTTGTCTGCTGCTAAG+AGG 0.512515 1_2:-18275548 Msa0060510:CDS
AATTAAAAGAACATTCTTCA+GGG 0.512671 1_2:+18273804 None:intergenic
ATAAACTTCTCAAGTAAAAG+AGG 0.515107 1_2:+18270424 None:intergenic
TGACAAACGCTGAAAGAGAA+TGG 0.515735 1_2:+18269208 None:intergenic
TAAACGTCTCTTCATCAGAC+AGG 0.516468 1_2:+18268724 None:intergenic
CACATTGCCGAAACAGCAAA+AGG 0.518228 1_2:-18270765 Msa0060510:CDS
GAAAACCACTCAAGCTGGGA+AGG 0.518997 1_2:-18269832 Msa0060510:CDS
GAATATCTCTGTCACAAGAC+TGG 0.519467 1_2:+18270401 None:intergenic
TTATAATCACCATCACCATC+TGG 0.519633 1_2:+18273874 None:intergenic
ATGATACTTCATCTCTTGAC+TGG 0.519939 1_2:-18274943 Msa0060510:CDS
GTCCACTGATGCTATGGATA+AGG 0.520330 1_2:-18269593 Msa0060510:CDS
GAGTGACTGCACTCATCCAT+CGG 0.521670 1_2:+18269061 None:intergenic
TCAAAAGATGTTAGCGAGGA+GGG 0.523175 1_2:-18273829 Msa0060510:CDS
GACCCTCGGTAACATCCTCT+TGG 0.525045 1_2:-18269645 Msa0060510:CDS
ATGATAACCCTATCCGATGA+TGG 0.525665 1_2:-18270930 Msa0060510:CDS
TCATCAGACAGGGAAGTTGG+AGG 0.526181 1_2:+18268735 None:intergenic
TCGGTGAATTGACATCGGTT+GGG 0.526361 1_2:+18276290 None:intergenic
ATGATGATCATAATAATCAC+AGG 0.526388 1_2:+18267805 None:intergenic
ACTGTATCGATCTCCATAGA+TGG 0.531998 1_2:+18269001 None:intergenic
CCCCTTCAAAATCCACTCCT+CGG 0.532038 1_2:-18276195 Msa0060510:CDS
CATGAGCTCCATCATCGGAT+AGG 0.532379 1_2:+18270922 None:intergenic
AACTTCTGAGACGTTCCACC+AGG 0.532892 1_2:+18270897 None:intergenic
CTGATGAAGAGACGTTTAGT+TGG 0.532923 1_2:-18268719 Msa0060510:CDS
CGCCAAGTCAATAGCTACAA+TGG 0.533424 1_2:-18269854 Msa0060510:CDS
AAAGCTGGAAGATGCTAAAG+TGG 0.534895 1_2:-18274666 Msa0060510:intron
CAGAAAGGATTCCTCTAACA+AGG 0.536790 1_2:-18273911 Msa0060510:CDS
CAGGACTTGGAGGTGGATGA+AGG 0.537608 1_2:-18274490 Msa0060510:CDS
AATTGGATTAGGAAAATTCG+AGG 0.537859 1_2:-18275653 Msa0060510:intron
ATGAGCTCCATCATCGGATA+GGG 0.538228 1_2:+18270923 None:intergenic
GATATATATTGGGATTTGGG+AGG 0.538617 1_2:+18276375 None:intergenic
ATATATATTGGGATTTGGGA+GGG 0.539549 1_2:+18276376 None:intergenic
TTATTACCAGGACTTGGAGG+TGG 0.541586 1_2:-18274497 Msa0060510:intron
TTCTGGTTTGGAAGATTCAG+AGG 0.541655 1_2:-18269434 Msa0060510:CDS
TGGCTCGGAAAATTGATTTG+CGG 0.545116 1_2:-18275902 Msa0060510:CDS
AGCACCTGTCTGTTCTGAGC+TGG 0.547082 1_2:+18268934 None:intergenic
AAATTATTACCAGGACTTGG+AGG 0.547686 1_2:-18274500 Msa0060510:intron
ATGATAATTATTTAGGTATG+CGG 0.547846 1_2:-18274000 Msa0060510:intron
TAGCTCACCAAAAGACGTAC+TGG 0.549623 1_2:+18269462 None:intergenic
ATATAGTTGTTCTGGACCCT+CGG 0.550650 1_2:-18269659 Msa0060510:CDS
GAAGTTGTTAAGCTTGCTAG+TGG 0.551315 1_2:-18268908 Msa0060510:CDS
CTGAGAAATGGATGTGCTTG+AGG 0.551351 1_2:+18274796 None:intergenic
TATGCTTGTGCCCAAGAACA+AGG 0.551433 1_2:-18273065 Msa0060510:CDS
GATGATGGAGCTCATGGTCC+TGG 0.552540 1_2:-18270915 Msa0060510:CDS
CTGATTCGGTGAATTGACAT+CGG 0.554757 1_2:+18276285 None:intergenic
GCGCCAAATTTCAATTTCAG+AGG 0.555629 1_2:-18268247 Msa0060510:CDS
AAGCTGGGAAGGGTTAGTTA+AGG 0.555894 1_2:-18269821 Msa0060510:CDS
GTGATTATTATGATCATCAT+GGG 0.557282 1_2:-18267802 Msa0060510:three_prime_UTR
TTATTATGATCATCATGGGT+CGG 0.557395 1_2:-18267798 Msa0060510:three_prime_UTR
ATTAGTTTGGATAACTCTGA+GGG 0.559852 1_2:+18269889 None:intergenic
TCGGAAAATTGATTTGCGGT+TGG 0.559901 1_2:-18275898 Msa0060510:CDS
GGGAACTGGTTCGCCTGACG+TGG 0.564149 1_2:-18275922 Msa0060510:CDS
GCCAAGCATATAGCAGAAGC+GGG 0.564477 1_2:-18268642 Msa0060510:CDS
CCAGTCACGCAAGAAATTCA+GGG 0.564944 1_2:+18273966 None:intergenic
AGAATCAGTGTTGCCTTCAA+GGG 0.565025 1_2:+18269516 None:intergenic
AGTGATGTCCACTGATGCTA+TGG 0.566893 1_2:-18269599 Msa0060510:CDS
ATCCTTATCCATAGCATCAG+TGG 0.568152 1_2:+18269591 None:intergenic
AGTGACTGCACTCATCCATC+GGG 0.568345 1_2:+18269062 None:intergenic
GCCTCAAGATCCAGATTTGG+TGG 0.568603 1_2:-18269170 Msa0060510:CDS
CTATCCGATGATGGAGCTCA+TGG 0.576560 1_2:-18270921 Msa0060510:CDS
TGCCAAGCATATAGCAGAAG+CGG 0.578503 1_2:-18268643 Msa0060510:CDS
AATGGAAAACCACTCAAGCT+GGG 0.579058 1_2:-18269836 Msa0060510:CDS
AATTGAATGTTGTACCTACT+CGG 0.580618 1_2:+18274415 None:intergenic
CCAGAACTGAAGATGCAGAA+TGG 0.580669 1_2:+18270372 None:intergenic
TTCGACGTTGACTTCTTCTG+TGG 0.581012 1_2:+18270447 None:intergenic
CTAACCCTTCCCAGCTTGAG+TGG 0.581738 1_2:+18269827 None:intergenic
TTTAATTACAGGACCAGTTG+GGG 0.582149 1_2:-18273788 Msa0060510:intron
ACGACCGAAGAAACAATAAG+AGG 0.582980 1_2:-18268476 Msa0060510:intron
GGGGTGGAATTGAGAAATTG+GGG 0.585059 1_2:+18276347 None:intergenic
TGTTAAAGAAGCTAAAGAGA+TGG 0.585445 1_2:-18270970 Msa0060510:CDS
AACTCTGAGGGGAAACTCCA+GGG 0.593785 1_2:+18269901 None:intergenic
GAGGATTTCCGCATTTCACA+AGG 0.594146 1_2:-18268228 Msa0060510:CDS
ACTTAGATGTTCAGTGTATG+GGG 0.597797 1_2:-18269768 Msa0060510:CDS
AAATCTTGATTCTGGAAACC+AGG 0.600916 1_2:+18269339 None:intergenic
TGCCAAGAGGATGTTACCGA+GGG 0.601703 1_2:+18269643 None:intergenic
CGCAGCTGTGTATAACCCGA+TGG 0.602819 1_2:-18269077 Msa0060510:CDS
AGAGCTTTGCATCAATGAGA+AGG 0.605568 1_2:-18269797 Msa0060510:CDS
AAGACGTTATCAAAACAGAA+AGG 0.607322 1_2:-18273926 Msa0060510:CDS
ACCACCAAATCTGGATCTTG+AGG 0.607687 1_2:+18269169 None:intergenic
GCTGAACATTATTTGAGCAG+AGG 0.607924 1_2:-18268072 Msa0060510:CDS
TCTACAGTTGTGTCTTCTGG+TGG 0.608964 1_2:-18269277 Msa0060510:CDS
TGATGATCTTGCAGGAACAA+TGG 0.609492 1_2:+18268317 None:intergenic
TTCACAGTATGCTGCTAGCG+TGG 0.609688 1_2:-18267983 Msa0060510:CDS
TTACTCAGAGAAACATCTAC+CGG 0.609977 1_2:+18269241 None:intergenic
AGGACCATGAGCTCCATCAT+CGG 0.610961 1_2:+18270917 None:intergenic
AATTAGTTTGGATAACTCTG+AGG 0.615241 1_2:+18269888 None:intergenic
TCGATACAGTGCAAAATGTG+TGG 0.616276 1_2:-18268988 Msa0060510:CDS
ATCTTGCAGGAACAATGGAT+CGG 0.620287 1_2:+18268322 None:intergenic
AAAACCACTCAAGCTGGGAA+GGG 0.622887 1_2:-18269831 Msa0060510:CDS
TCTGCTGCTAAGAGGGAGAG+TGG 0.625391 1_2:-18275540 Msa0060510:CDS
TTCTGGACTACAATCTACAA+TGG 0.627792 1_2:+18274892 None:intergenic
CGTTGATTAAATTACCCTGG+AGG 0.629714 1_2:+18276165 None:intergenic
TACTACAAAAGATGATACCC+TGG 0.629872 1_2:-18269918 Msa0060510:CDS
CATGCCAGCTCAGAACAGAC+AGG 0.630314 1_2:-18268938 Msa0060510:CDS
TGGTTTGGAAGATTCAGAGG+TGG 0.632543 1_2:-18269431 Msa0060510:CDS
CAAACCAACAAAAGCCTCAG+AGG 0.633080 1_2:-18274130 Msa0060510:intron
ACCTTACACAACGAAAAGAA+CGG 0.635504 1_2:+18275606 None:intergenic
TTCAAAAGATGTTAGCGAGG+AGG 0.638177 1_2:-18273830 Msa0060510:CDS
GGAGGCGAAATTGTCAGCTG+AGG 0.639126 1_2:-18275877 Msa0060510:intron
ACAACAAGGATCATGCACTC+CGG 0.639565 1_2:-18276242 Msa0060510:CDS
GTTGGGTTGTTCATGGTGTG+AGG 0.641673 1_2:+18276307 None:intergenic
AAACATCTACCGGACAAGCA+AGG 0.647550 1_2:+18269251 None:intergenic
ATGCTTGTGCCCAAGAACAA+GGG 0.649836 1_2:-18273064 Msa0060510:CDS
CAGATGCTGAGCCACCGAGT+AGG 0.651091 1_2:-18274429 Msa0060510:intron
GATATATCATTGTTGTGTGA+AGG 0.651596 1_2:-18268027 Msa0060510:CDS
TTGCCAAGAGGATGTTACCG+AGG 0.651979 1_2:+18269642 None:intergenic
ATGAAGGCAGTACTGTATCA+GGG 0.653597 1_2:-18274474 Msa0060510:CDS
AAGTTGTTAAGCTTGCTAGT+GGG 0.656691 1_2:-18268907 Msa0060510:CDS
TGGACTACAATCTACAATGG+TGG 0.656866 1_2:+18274895 None:intergenic
GATGGAGCTCATGGTCCTGG+TGG 0.657711 1_2:-18270912 Msa0060510:CDS
TGCTTCAAAAGATGTTAGCG+AGG 0.658230 1_2:-18273833 Msa0060510:CDS
TTGTCAACAGCTCAATACAT+CGG 0.659863 1_2:-18271358 Msa0060510:intron
GATCAAACTGACATACCAGA+TGG 0.670055 1_2:-18273889 Msa0060510:CDS
ATACAGTGCAAAATGTGTGG+AGG 0.671272 1_2:-18268985 Msa0060510:CDS
TGATGATCATAATAATCACA+GGG 0.671717 1_2:+18267806 None:intergenic
CTAGAAATGTCAGACCTCTG+AGG 0.672592 1_2:+18274116 None:intergenic
AAACGTCTCTTCATCAGACA+GGG 0.675440 1_2:+18268725 None:intergenic
ATTGACTTTCAAACTCACCA+CGG 0.678678 1_2:+18269701 None:intergenic
GGAATTAGGGTTCAATTTGG+GGG 0.681335 1_2:+18276328 None:intergenic
TCCTGCAAGATCATCAACAA+CGG 0.691180 1_2:-18268310 Msa0060510:CDS
TTTATCATCTGAATAAGACA+AGG 0.711090 1_2:+18274769 None:intergenic
GAGAGTGGAAGAACTAACTG+TGG 0.712518 1_2:-18275525 Msa0060510:CDS
TTAGTTTGGATAACTCTGAG+GGG 0.713297 1_2:+18269890 None:intergenic
ATTAGATCTATTCCAGACCG+TGG 0.713490 1_2:-18269718 Msa0060510:CDS
ATCATGTGTTCTGACTGTGT+AGG 0.728555 1_2:+18274743 None:intergenic
ACTGACATACCAGATGGTGA+TGG 0.730638 1_2:-18273883 Msa0060510:CDS
GTAGCTGAACAACAACAACA+AGG 0.737627 1_2:-18276256 Msa0060510:CDS
TGAATGTTGTACCTACTCGG+TGG 0.740553 1_2:+18274418 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTTTTATGATAATTATTT+AGG - chr1_2:18270106-18270125 Msa0060510:intron 10.0%
!! AAAATTTCAGTAATTTAATT+GGG - chr1_2:18270605-18270624 Msa0060510:CDS 10.0%
!!! TTTTAGATTTTATACAAAAA+CGG + chr1_2:18270840-18270859 None:intergenic 10.0%
!!! CTTTATTTATAAATATGTTT+TGG - chr1_2:18271091-18271110 Msa0060510:intron 10.0%
!!! TTTTAAAAAATTGACTATTT+GGG + chr1_2:18271184-18271203 None:intergenic 10.0%
!!! ATTTTTTAAAAGCATATATA+TGG - chr1_2:18271193-18271212 Msa0060510:intron 10.0%
!!! ATATTATTATCATTTTAAGA+TGG - chr1_2:18272053-18272072 Msa0060510:intron 10.0%
!!! TTTTTTTAAATTAGGTAAAA+AGG - chr1_2:18273464-18273483 Msa0060510:intron 10.0%
!!! GTTAAAAAAATAGACTTTTT+CGG - chr1_2:18268285-18268304 Msa0060510:CDS 15.0%
!!! TTAAAAAAATAGACTTTTTC+GGG - chr1_2:18268286-18268305 Msa0060510:CDS 15.0%
!!! TTTTGCGAAAATATTTATAA+GGG - chr1_2:18268317-18268336 Msa0060510:CDS 15.0%
!! AGAAAGTTATCAAAATTTAA+GGG + chr1_2:18269283-18269302 None:intergenic 15.0%
!! AAGAAAGTTATCAAAATTTA+AGG + chr1_2:18269284-18269303 None:intergenic 15.0%
!! GAAAATTTCAGTAATTTAAT+TGG - chr1_2:18270604-18270623 Msa0060510:CDS 15.0%
!!! CTTTTAAAAAATTGACTATT+TGG + chr1_2:18271185-18271204 None:intergenic 15.0%
!!! ATTTAAACAATGAAATCTTT+TGG + chr1_2:18271585-18271604 None:intergenic 15.0%
!! GATTTCATTGTTTAAATATT+TGG - chr1_2:18271588-18271607 Msa0060510:intron 15.0%
!! AAAATAACAATTTGAAGATA+GGG + chr1_2:18273897-18273916 None:intergenic 15.0%
!! AAAAATAACAATTTGAAGAT+AGG + chr1_2:18273898-18273917 None:intergenic 15.0%
!!! TTGTTATTTTTTTTTAACGA+CGG - chr1_2:18273907-18273926 Msa0060510:CDS 15.0%
!!! TTAGATTTCATTTGATAATA+GGG - chr1_2:18276184-18276203 Msa0060510:CDS 15.0%
!! AAAATATGTTAAAGAATGAA+TGG + chr1_2:18276210-18276229 None:intergenic 15.0%
!! TTTGATATATATTGGGATTT+GGG + chr1_2:18267744-18267763 None:intergenic 20.0%
!!! TTTTGATATATATTGGGATT+TGG + chr1_2:18267745-18267764 None:intergenic 20.0%
!!! TAAAAAAATAGACTTTTTCG+GGG - chr1_2:18268287-18268306 Msa0060510:CDS 20.0%
!!! GTTTTGCGAAAATATTTATA+AGG - chr1_2:18268316-18268335 Msa0060510:CDS 20.0%
!! ATATCTTCAAATACATGAAT+AGG + chr1_2:18268615-18268634 None:intergenic 20.0%
!! TCATGTATTTGAAGATATTA+CGG - chr1_2:18268617-18268636 Msa0060510:CDS 20.0%
!!! GAATTTAAAACCAATAAAGT+GGG + chr1_2:18269102-18269121 None:intergenic 20.0%
!!! AGAATTTAAAACCAATAAAG+TGG + chr1_2:18269103-18269122 None:intergenic 20.0%
!!! AAGTTCAAAATTTTCTGTTA+TGG - chr1_2:18269243-18269262 Msa0060510:CDS 20.0%
!!! AATTTTGATAACTTTCTTAG+TGG - chr1_2:18269286-18269305 Msa0060510:CDS 20.0%
!! ATTGGTCATTTAAAAGAAAA+TGG - chr1_2:18269779-18269798 Msa0060510:CDS 20.0%
!!! TTTTATTAGAAAAACAAGCA+AGG + chr1_2:18269814-18269833 None:intergenic 20.0%
!! ATCATAAAACAAGAAAAGTA+TGG + chr1_2:18270098-18270117 None:intergenic 20.0%
!! ATGATAATTATTTAGGTATG+CGG - chr1_2:18270113-18270132 Msa0060510:intron 20.0%
!! AATTAAAAGAACATTCTTCA+GGG + chr1_2:18270312-18270331 None:intergenic 20.0%
!! TAATTAAAAGAACATTCTTC+AGG + chr1_2:18270313-18270332 None:intergenic 20.0%
!!! AAGAATGTTCTTTTAATTAC+AGG - chr1_2:18270314-18270333 Msa0060510:intron 20.0%
!!! TGTTAACAATACTTTAAGTT+TGG + chr1_2:18271694-18271713 None:intergenic 20.0%
!!! ACTTAAAGTATTGTTAACAT+TGG - chr1_2:18271695-18271714 Msa0060510:intron 20.0%
!! AAGTATATTGAAAAATGATG+TGG - chr1_2:18272597-18272616 Msa0060510:intron 20.0%
!! TGTAATTTCAGTTATCAATT+TGG - chr1_2:18272707-18272726 Msa0060510:intron 20.0%
!! TAAAATTGAATTAAGGAAGA+AGG + chr1_2:18272970-18272989 None:intergenic 20.0%
!! AAATGTAAGTGTATTATCAA+TGG + chr1_2:18273247-18273266 None:intergenic 20.0%
!!! TCAAACTTTAATTTTAGTTG+AGG - chr1_2:18273275-18273294 Msa0060510:intron 20.0%
!!! CGTGTTCATTTTTTTAAATT+AGG - chr1_2:18273456-18273475 Msa0060510:intron 20.0%
!!! CTTTGCTATATTTTTTATTC+TGG + chr1_2:18273769-18273788 None:intergenic 20.0%
!! CAGAATAAAAAATATAGCAA+AGG - chr1_2:18273767-18273786 Msa0060510:intron 20.0%
!! ACAATATCTTCATCTTAAAA+GGG + chr1_2:18273805-18273824 None:intergenic 20.0%
!! AACAATATCTTCATCTTAAA+AGG + chr1_2:18273806-18273825 None:intergenic 20.0%
!! TTGATTCAATAGAAAGTTAA+GGG + chr1_2:18274624-18274643 None:intergenic 20.0%
!! TTTGATTCAATAGAAAGTTA+AGG + chr1_2:18274625-18274644 None:intergenic 20.0%
!! TTGAAGAAAAAACTTTATCA+AGG + chr1_2:18275299-18275318 None:intergenic 20.0%
!!! AAGAGGTATATAAATAAACA+TGG - chr1_2:18275654-18275673 Msa0060510:intron 20.0%
!! GTTAACAAGAAAATTCTTAA+TGG - chr1_2:18275989-18276008 Msa0060510:intron 20.0%
!!! CTTAGATTTCATTTGATAAT+AGG - chr1_2:18276183-18276202 Msa0060510:CDS 20.0%
!! TGGGGTTTTTGATATATATT+GGG + chr1_2:18267751-18267770 None:intergenic 25.0%
!! TTGGGGTTTTTGATATATAT+TGG + chr1_2:18267752-18267771 None:intergenic 25.0%
!!! TGTTAATTTTAGCTGTAATG+TGG - chr1_2:18268009-18268028 Msa0060510:CDS 25.0%
! AAAGAGAATTGTGTAATTGA+GGG - chr1_2:18268095-18268114 Msa0060510:intron 25.0%
!! GAGTTTCTTTTATCTCTAAT+TGG - chr1_2:18268443-18268462 Msa0060510:intron 25.0%
!! CTTTTATCTCTAATTGGATT+AGG - chr1_2:18268449-18268468 Msa0060510:intron 25.0%
! TAAGGTGGAAAAGAAATTTA+AGG - chr1_2:18268524-18268543 Msa0060510:CDS 25.0%
! GGAAAAGAAATTTAAGGATT+CGG - chr1_2:18268530-18268549 Msa0060510:CDS 25.0%
! GAAAAGAAATTTAAGGATTC+GGG - chr1_2:18268531-18268550 Msa0060510:CDS 25.0%
! GTTCTTTCTATGATTTAATG+TGG - chr1_2:18268655-18268674 Msa0060510:CDS 25.0%
!! TATATGCATACCTTTTGTAA+TGG - chr1_2:18268714-18268733 Msa0060510:CDS 25.0%
!! ATATGCATACCTTTTGTAAT+GGG - chr1_2:18268715-18268734 Msa0060510:CDS 25.0%
!! AGTAAACAATTTGCTTTAGA+AGG - chr1_2:18268763-18268782 Msa0060510:intron 25.0%
!! ACAGAAAATTTTGAACTTTC+TGG + chr1_2:18269241-18269260 None:intergenic 25.0%
!! TTCAAAATTTTCTGTTATGG+AGG - chr1_2:18269246-18269265 Msa0060510:CDS 25.0%
!! TCAAAATTTTCTGTTATGGA+GGG - chr1_2:18269247-18269266 Msa0060510:CDS 25.0%
! TTTATCATCTGAATAAGACA+AGG + chr1_2:18269347-18269366 None:intergenic 25.0%
! TGTTTCCAAAAATTATTACC+AGG - chr1_2:18269604-18269623 Msa0060510:CDS 25.0%
!! AAATTTATTTCCTGATAGTG+AGG - chr1_2:18269874-18269893 Msa0060510:CDS 25.0%
! GATGATCATACATAGTTAAA+TGG + chr1_2:18270575-18270594 None:intergenic 25.0%
!!! GACAATTATCTTTGTTTTCT+TGG - chr1_2:18270648-18270667 Msa0060510:intron 25.0%
!!! AAAATTTTAGAAAGCACAAG+CGG + chr1_2:18270717-18270736 None:intergenic 25.0%
!!! TGTGCTTTCTAAAATTTTCT+TGG - chr1_2:18270719-18270738 Msa0060510:intron 25.0%
!! TTCAAGACTTACAATTTTCA+TGG + chr1_2:18270798-18270817 None:intergenic 25.0%
! AAATTGTAAGTCTTGAATCT+TGG - chr1_2:18270801-18270820 Msa0060510:CDS 25.0%
!! AACTTTAAAAGGGCAAAAAT+GGG + chr1_2:18270866-18270885 None:intergenic 25.0%
!! AAACTTTAAAAGGGCAAAAA+TGG + chr1_2:18270867-18270886 None:intergenic 25.0%
! ACTTGTTCATAACTTCATAT+TGG - chr1_2:18270974-18270993 Msa0060510:CDS 25.0%
!! ATTGACTATTTGGGATTAAT+AGG + chr1_2:18271175-18271194 None:intergenic 25.0%
! TAGGAATTAATTAGCCAAAT+TGG - chr1_2:18271227-18271246 Msa0060510:intron 25.0%
! AGGAATTAATTAGCCAAATT+GGG - chr1_2:18271228-18271247 Msa0060510:intron 25.0%
! TAAACTCCGAAATATAGAAA+AGG + chr1_2:18271281-18271300 None:intergenic 25.0%
! GTCTATGTATACTTCATATT+AGG + chr1_2:18271316-18271335 None:intergenic 25.0%
!!! ATGAGAAGTTATTTCTAGTT+AGG + chr1_2:18271542-18271561 None:intergenic 25.0%
! AAATAGGATTCTCTTCTAAA+AGG + chr1_2:18271657-18271676 None:intergenic 25.0%
! GGATTGTTAAGATTTCAAAT+AGG + chr1_2:18271673-18271692 None:intergenic 25.0%
!!! GTTAATTTTGAAGTTGATGA+AGG + chr1_2:18271842-18271861 None:intergenic 25.0%
!!! ATTTTAAGATGGTGAAAACT+AGG - chr1_2:18272064-18272083 Msa0060510:intron 25.0%
! TAATGAGCTGGATAAAAATA+TGG - chr1_2:18272230-18272249 Msa0060510:intron 25.0%
! GTTATTAAGAAAGTAAGTGA+TGG + chr1_2:18272490-18272509 None:intergenic 25.0%
! TATACTGATGTTTATAGGAA+AGG + chr1_2:18272523-18272542 None:intergenic 25.0%
!!! GTTGGAAATCATTACTTTTT+TGG - chr1_2:18272548-18272567 Msa0060510:intron 25.0%
! TTTCAATATACTTCCTATTG+AGG + chr1_2:18272590-18272609 None:intergenic 25.0%
!!! TTTTTAGAAAGAATGCTCAT+AGG + chr1_2:18272639-18272658 None:intergenic 25.0%
! AATTTGGCCATAACTATTAA+AGG - chr1_2:18272723-18272742 Msa0060510:intron 25.0%
! GAGATAACCTTTAATAGTTA+TGG + chr1_2:18272733-18272752 None:intergenic 25.0%
!! CTTAAGATTTAAGACATCTA+TGG + chr1_2:18272887-18272906 None:intergenic 25.0%
!! AAGCAATAAGCTTTTAATGT+TGG - chr1_2:18272904-18272923 Msa0060510:intron 25.0%
!! TCTTTAGCTTCTTTAACATT+AGG + chr1_2:18273141-18273160 None:intergenic 25.0%
!!! TTTAATTTTAGTTGAGGATG+TGG - chr1_2:18273281-18273300 Msa0060510:intron 25.0%
! TTTAAATTAGGTAAAAAGGC+TGG - chr1_2:18273468-18273487 Msa0060510:intron 25.0%
! TGTAGTCTACAAAAGTTATT+TGG + chr1_2:18273498-18273517 None:intergenic 25.0%
! ATAAACTTCTCAAGTAAAAG+AGG + chr1_2:18273692-18273711 None:intergenic 25.0%
! CAGAAGATTTATCGAATATA+TGG + chr1_2:18273839-18273858 None:intergenic 25.0%
! ATGCATTTATATGACATACA+AGG - chr1_2:18273973-18273992 Msa0060510:CDS 25.0%
! ACATCACTACAAATTTACTT+TGG + chr1_2:18274502-18274521 None:intergenic 25.0%
! TCTACAGAATGTCTATTATT+TGG + chr1_2:18274548-18274567 None:intergenic 25.0%
!!! AACTTACACATTGTTTTTGT+TGG + chr1_2:18275276-18275295 None:intergenic 25.0%
! TGTTCAGCATATTATCATAA+CGG + chr1_2:18275341-18275360 None:intergenic 25.0%
!! ACTACAAATATTATGGCTTT+TGG - chr1_2:18275549-18275568 Msa0060510:CDS 25.0%
!! CTACAAATATTATGGCTTTT+GGG - chr1_2:18275550-18275569 Msa0060510:CDS 25.0%
!! CTATAGTAAAGAGATTTTAG+AGG - chr1_2:18275611-18275630 Msa0060510:CDS 25.0%
!! TATACCTCTTATTGTTTCTT+CGG + chr1_2:18275644-18275663 None:intergenic 25.0%
!!! AATCCTCTGAAATTGAAATT+TGG + chr1_2:18275872-18275891 None:intergenic 25.0%
!! TTTTCTTAATGTTTCAATGC+AGG - chr1_2:18276012-18276031 Msa0060510:intron 25.0%
! TGATGATCATAATAATCACA+GGG + chr1_2:18276310-18276329 None:intergenic 25.0%
! ATGATGATCATAATAATCAC+AGG + chr1_2:18276311-18276330 None:intergenic 25.0%
! TGTGATTATTATGATCATCA+TGG - chr1_2:18276310-18276329 Msa0060510:exon 25.0%
! GTGATTATTATGATCATCAT+GGG - chr1_2:18276311-18276330 Msa0060510:exon 25.0%
! AAATTAAATAGAGCAGCAAT+AGG - chr1_2:18276344-18276363 Msa0060510:five_prime_UTR 25.0%
!! GTGAATTGAATTTTGAGAGT+TGG - chr1_2:18268072-18268091 Msa0060510:CDS 30.0%
GAAAGAGAATTGTGTAATTG+AGG - chr1_2:18268094-18268113 Msa0060510:intron 30.0%
AATAATACGCCGAAGAAAAA+CGG - chr1_2:18268150-18268169 Msa0060510:intron 30.0%
! AATTGGATTAGGAAAATTCG+AGG - chr1_2:18268460-18268479 Msa0060510:intron 30.0%
! TATGCATACCTTTTGTAATG+GGG - chr1_2:18268716-18268735 Msa0060510:CDS 30.0%
!! TTGCTTTAGAAGGTAAAGTT+AGG - chr1_2:18268773-18268792 Msa0060510:intron 30.0%
AAGGTAAAGTTAGGAATGTT+AGG - chr1_2:18268782-18268801 Msa0060510:intron 30.0%
ATGTACATGCATAACAAACA+CGG - chr1_2:18269039-18269058 Msa0060510:CDS 30.0%
! TCCTGCATTAGCAAATTTTA+TGG + chr1_2:18269151-18269170 None:intergenic 30.0%
! AATCATGGAAACTAGTTTAG+AGG - chr1_2:18269540-18269559 Msa0060510:CDS 30.0%
! ATCATGGAAACTAGTTTAGA+GGG - chr1_2:18269541-18269560 Msa0060510:CDS 30.0%
! CAAGTCCTGGTAATAATTTT+TGG + chr1_2:18269612-18269631 None:intergenic 30.0%
CAAAAATTATTACCAGGACT+TGG - chr1_2:18269610-18269629 Msa0060510:CDS 30.0%
AATTGAATGTTGTACCTACT+CGG + chr1_2:18269701-18269720 None:intergenic 30.0%
AGTTTAGCAATGGGATATAT+TGG - chr1_2:18269761-18269780 Msa0060510:CDS 30.0%
! TTTGCTAGCTAATTTTTGCA+CGG + chr1_2:18269857-18269876 None:intergenic 30.0%
CATTCTGCAATATGATACAA+GGG + chr1_2:18269904-18269923 None:intergenic 30.0%
TCATTCTGCAATATGATACA+AGG + chr1_2:18269905-18269924 None:intergenic 30.0%
! AAACAAGAAAAGTATGGTTC+AGG + chr1_2:18270092-18270111 None:intergenic 30.0%
AAGACGTTATCAAAACAGAA+AGG - chr1_2:18270187-18270206 Msa0060510:intron 30.0%
!! TTTTAATTACAGGACCAGTT+GGG - chr1_2:18270324-18270343 Msa0060510:intron 30.0%
AATGATTCTTTAAGTGCAGA+AGG + chr1_2:18270455-18270474 None:intergenic 30.0%
GATCATACATAGTTAAATGG+AGG + chr1_2:18270572-18270591 None:intergenic 30.0%
TATTATGCATAATTGAGCAG+AGG + chr1_2:18270770-18270789 None:intergenic 30.0%
! CATGGCAAGAAACTTTAAAA+GGG + chr1_2:18270876-18270895 None:intergenic 30.0%
TACACAGAAAACATGAATCT+GGG + chr1_2:18270951-18270970 None:intergenic 30.0%
ATACACAGAAAACATGAATC+TGG + chr1_2:18270952-18270971 None:intergenic 30.0%
! AGCTTGCCTTTTCTATATTT+CGG - chr1_2:18271272-18271291 Msa0060510:intron 30.0%
ACTTCATATTAGGCAAGAAA+CGG + chr1_2:18271306-18271325 None:intergenic 30.0%
AGCTAAATACCTAAGTATGA+GGG + chr1_2:18271426-18271445 None:intergenic 30.0%
TAGCTAAATACCTAAGTATG+AGG + chr1_2:18271427-18271446 None:intergenic 30.0%
AAAGGAAAAAAGCCACAAAA+TGG + chr1_2:18271801-18271820 None:intergenic 30.0%
TCTACTTAAGGATGATCTAA+AGG + chr1_2:18271819-18271838 None:intergenic 30.0%
! TAGACTTCCAATTTTCAGAA+AGG + chr1_2:18271870-18271889 None:intergenic 30.0%
AATAGCAACTTACTACAACT+AGG + chr1_2:18271942-18271961 None:intergenic 30.0%
!!! TGTAGATTTTGAAGTAAGGA+GGG - chr1_2:18272119-18272138 Msa0060510:intron 30.0%
ACTCAAAGTTGAAAACAAAG+TGG + chr1_2:18272387-18272406 None:intergenic 30.0%
ACTGCTATACTGATGTTTAT+AGG + chr1_2:18272528-18272547 None:intergenic 30.0%
AGATTCGTAAAAACAGAGAA+AGG + chr1_2:18272688-18272707 None:intergenic 30.0%
! AATAAGCTTTTAATGTTGGC+TGG - chr1_2:18272908-18272927 Msa0060510:intron 30.0%
TGTTAAAGAAGCTAAAGAGA+TGG - chr1_2:18273143-18273162 Msa0060510:intron 30.0%
! TCCATTTTCCCTTCTTTTAA+GGG + chr1_2:18273596-18273615 None:intergenic 30.0%
! TTCCATTTTCCCTTCTTTTA+AGG + chr1_2:18273597-18273616 None:intergenic 30.0%
AGTGAAATTTATGTCTTCTG+TGG - chr1_2:18273625-18273644 Msa0060510:intron 30.0%
! CATAAACCACAACATTTTGT+AGG + chr1_2:18273933-18273952 None:intergenic 30.0%
! AACCATAACTCTTCAACTTT+TGG - chr1_2:18273997-18274016 Msa0060510:intron 30.0%
ATCCAAAAGTTGAAGAGTTA+TGG + chr1_2:18274002-18274021 None:intergenic 30.0%
! AAGAAAGTGCAGACATTATA+TGG - chr1_2:18274137-18274156 Msa0060510:CDS 30.0%
! ATTAGTTTGGATAACTCTGA+GGG + chr1_2:18274227-18274246 None:intergenic 30.0%
! AATTAGTTTGGATAACTCTG+AGG + chr1_2:18274228-18274247 None:intergenic 30.0%
TAACTTAGATGTTCAGTGTA+TGG - chr1_2:18274343-18274362 Msa0060510:intron 30.0%
AACTTAGATGTTCAGTGTAT+GGG - chr1_2:18274344-18274363 Msa0060510:intron 30.0%
TCTGAGTTATATAGTTGTTC+TGG - chr1_2:18274446-18274465 Msa0060510:CDS 30.0%
ATAAATCACTTGATATGTCC+TGG - chr1_2:18274756-18274775 Msa0060510:CDS 30.0%
!! TCTATTTTGAATTGCAGTCT+CGG + chr1_2:18274804-18274823 None:intergenic 30.0%
ATTTCTCTTGGAGAAGATTT+GGG + chr1_2:18274983-18275002 None:intergenic 30.0%
TATTTCTCTTGGAGAAGATT+TGG + chr1_2:18274984-18275003 None:intergenic 30.0%
GTTCAGCATATTATCATAAC+GGG + chr1_2:18275340-18275359 None:intergenic 30.0%
GGCTTCTACTACAAATATTA+TGG - chr1_2:18275542-18275561 Msa0060510:CDS 30.0%
! TTTTAACACCTTGTGAAATG+CGG + chr1_2:18275896-18275915 None:intergenic 30.0%
TTAAAAAGATGAGGAAAGGA+AGG - chr1_2:18275910-18275929 Msa0060510:CDS 30.0%
TTATTTGAGCAGAGGTAAAA+TGG - chr1_2:18276049-18276068 Msa0060510:intron 30.0%
GATATATCATTGTTGTGTGA+AGG - chr1_2:18276086-18276105 Msa0060510:intron 30.0%
!!! GCTTTGATTTTGTTGATGAT+TGG - chr1_2:18276255-18276274 Msa0060510:CDS 30.0%
!!! ATTTTGTTGATGATTGGCAT+AGG - chr1_2:18276261-18276280 Msa0060510:CDS 30.0%
TTATTATGATCATCATGGGT+CGG - chr1_2:18276315-18276334 Msa0060510:exon 30.0%
AGGAATTAGGGTTCAATTTG+GGG + chr1_2:18267789-18267808 None:intergenic 35.0%
GAGGAATTAGGGTTCAATTT+GGG + chr1_2:18267790-18267809 None:intergenic 35.0%
TGAGGAATTAGGGTTCAATT+TGG + chr1_2:18267791-18267810 None:intergenic 35.0%
!! TTGCGTTGATTAAATTACCC+TGG + chr1_2:18267954-18267973 None:intergenic 35.0%
ATAATACGCCGAAGAAAAAC+GGG - chr1_2:18268151-18268170 Msa0060510:intron 35.0%
ACTGTGAGTTTGTGTAAGTT+GGG - chr1_2:18268379-18268398 Msa0060510:intron 35.0%
ACCTTACACAACGAAAAGAA+CGG + chr1_2:18268510-18268529 None:intergenic 35.0%
! TGGTAGCTTGATTTGAGATA+AGG - chr1_2:18268675-18268694 Msa0060510:CDS 35.0%
! GCTTGATTTGAGATAAGGTT+AGG - chr1_2:18268680-18268699 Msa0060510:CDS 35.0%
ACTCAAAACCCCATTACAAA+AGG + chr1_2:18268727-18268746 None:intergenic 35.0%
! ATCAGTTGATGTATGAAGCA+CGG - chr1_2:18268827-18268846 Msa0060510:intron 35.0%
TCTCAAATTACTAGCAGTGT+TGG + chr1_2:18268888-18268907 None:intergenic 35.0%
TATATGTGTCAGTGTTGTGT+TGG - chr1_2:18268930-18268949 Msa0060510:CDS 35.0%
CATCATCAACTTATGAAGCA+CGG + chr1_2:18269009-18269028 None:intergenic 35.0%
CTCACTTAAAGGGTAGAATA+AGG + chr1_2:18269073-18269092 None:intergenic 35.0%
!! GCCATAAAATTTGCTAATGC+AGG - chr1_2:18269147-18269166 Msa0060510:CDS 35.0%
ATGATACTTCATCTCTTGAC+TGG - chr1_2:18269170-18269189 Msa0060510:CDS 35.0%
! TGGAGTGATTGGACATTTTT+GGG - chr1_2:18269190-18269209 Msa0060510:CDS 35.0%
TTCTGGACTACAATCTACAA+TGG + chr1_2:18269224-18269243 None:intergenic 35.0%
!! TAGCATCTTCCAGCTTTAAA+GGG + chr1_2:18269444-18269463 None:intergenic 35.0%
! TTAGCATCTTCCAGCTTTAA+AGG + chr1_2:18269445-18269464 None:intergenic 35.0%
ATTACCAACAGTTGTGCAAA+GGG + chr1_2:18269523-18269542 None:intergenic 35.0%
! TCATGGAAACTAGTTTAGAG+GGG - chr1_2:18269542-18269561 Msa0060510:CDS 35.0%
AAATCATTGACACAAAGCTG+AGG + chr1_2:18269576-18269595 None:intergenic 35.0%
AAATTATTACCAGGACTTGG+AGG - chr1_2:18269613-18269632 Msa0060510:CDS 35.0%
GAAACTGAGTGAAATTAGTC+AGG + chr1_2:18269734-18269753 None:intergenic 35.0%
TAATTTCACTCAGTTTCCCT+CGG - chr1_2:18269737-18269756 Msa0060510:CDS 35.0%
! TTGCTAGCTAATTTTTGCAC+GGG + chr1_2:18269856-18269875 None:intergenic 35.0%
TTATAATCACCATCACCATC+TGG + chr1_2:18270242-18270261 None:intergenic 35.0%
! TTTGAAGCATAGTCACAATC+AGG + chr1_2:18270269-18270288 None:intergenic 35.0%
!! CTTTTAATTACAGGACCAGT+TGG - chr1_2:18270323-18270342 Msa0060510:intron 35.0%
TTTAATTACAGGACCAGTTG+GGG - chr1_2:18270325-18270344 Msa0060510:intron 35.0%
ATAATTCTACATACCCCAAC+TGG + chr1_2:18270341-18270360 None:intergenic 35.0%
! AAAAGCACAACAGAAGACAT+GGG + chr1_2:18270533-18270552 None:intergenic 35.0%
!! TCTGTTGTGCTTTTGAGTAT+TGG - chr1_2:18270539-18270558 Msa0060510:intron 35.0%
!! CTGTTGTGCTTTTGAGTATT+GGG - chr1_2:18270540-18270559 Msa0060510:intron 35.0%
CATACATAGTTAAATGGAGG+AGG + chr1_2:18270569-18270588 None:intergenic 35.0%
!! GGTTTCTAGTGATAATACAC+TGG - chr1_2:18270626-18270645 Msa0060510:CDS 35.0%
! AAAGCACAAGCGGAAAATTT+TGG + chr1_2:18270707-18270726 None:intergenic 35.0%
CTTGAATCTTGGTATTCTGA+AGG - chr1_2:18270812-18270831 Msa0060510:CDS 35.0%
CCATGGCAAGAAACTTTAAA+AGG + chr1_2:18270877-18270896 None:intergenic 35.0%
!!! CCTTTTAAAGTTTCTTGCCA+TGG - chr1_2:18270874-18270893 Msa0060510:CDS 35.0%
AAATACGTTCTACATAGCCA+TGG + chr1_2:18270894-18270913 None:intergenic 35.0%
ATATATGGTCAAGCATGCAT+AGG - chr1_2:18271208-18271227 Msa0060510:intron 35.0%
TGTCAAAATGTGTCCCAATT+TGG + chr1_2:18271244-18271263 None:intergenic 35.0%
AGTATACATAGACGTGCAAA+AGG - chr1_2:18271323-18271342 Msa0060510:CDS 35.0%
! GCATATCAGCAGTAATTTGT+GGG + chr1_2:18271380-18271399 None:intergenic 35.0%
AGCATATCAGCAGTAATTTG+TGG + chr1_2:18271381-18271400 None:intergenic 35.0%
TGAGGGTAGAAAAGATAACT+TGG + chr1_2:18271409-18271428 None:intergenic 35.0%
! TCTTTTCTACCCTCATACTT+AGG - chr1_2:18271414-18271433 Msa0060510:intron 35.0%
!! GTGTCACTTCTTGATTCAAT+TGG + chr1_2:18271495-18271514 None:intergenic 35.0%
!!! TTTTGACGCTGTTTCTGAAA+AGG + chr1_2:18271628-18271647 None:intergenic 35.0%
!! AGTTGATGAAGGTCTACTTA+AGG + chr1_2:18271831-18271850 None:intergenic 35.0%
! ACCTTGTCCTTTCTGAAAAT+TGG - chr1_2:18271860-18271879 Msa0060510:intron 35.0%
! TCCAATTTTCAGAAAGGACA+AGG + chr1_2:18271864-18271883 None:intergenic 35.0%
GCCTTAATTCATTAAGAAGC+AGG - chr1_2:18272007-18272026 Msa0060510:intron 35.0%
GCCTGCTTCTTAATGAATTA+AGG + chr1_2:18272011-18272030 None:intergenic 35.0%
AGATGGTGAAAACTAGGATT+AGG - chr1_2:18272070-18272089 Msa0060510:intron 35.0%
AAAACTAGGATTAGGTGGTT+TGG - chr1_2:18272078-18272097 Msa0060510:intron 35.0%
AAACTAGGATTAGGTGGTTT+GGG - chr1_2:18272079-18272098 Msa0060510:intron 35.0%
!!! GACCTGTAGATTTTGAAGTA+AGG - chr1_2:18272115-18272134 Msa0060510:intron 35.0%
CTCCTTACTTCAAAATCTAC+AGG + chr1_2:18272120-18272139 None:intergenic 35.0%
!!! CTGTAGATTTTGAAGTAAGG+AGG - chr1_2:18272118-18272137 Msa0060510:intron 35.0%
AGATCTAGAGATTAATGAGC+TGG - chr1_2:18272218-18272237 Msa0060510:intron 35.0%
! AGAATCAGTTTTTGTCTGCA+TGG + chr1_2:18272357-18272376 None:intergenic 35.0%
!! AAGTAAGTGATGGATCCTTA+GGG + chr1_2:18272480-18272499 None:intergenic 35.0%
!! AAAGTAAGTGATGGATCCTT+AGG + chr1_2:18272481-18272500 None:intergenic 35.0%
TTATAGGAAAGGAGACAACA+GGG + chr1_2:18272512-18272531 None:intergenic 35.0%
TTTATAGGAAAGGAGACAAC+AGG + chr1_2:18272513-18272532 None:intergenic 35.0%
AAACATCAGTATAGCAGTGT+TGG - chr1_2:18272530-18272549 Msa0060510:intron 35.0%
TATACTTCCTATTGAGGATC+AGG + chr1_2:18272584-18272603 None:intergenic 35.0%
TTGTCAACAGCTCAATACAT+CGG - chr1_2:18272755-18272774 Msa0060510:intron 35.0%
TTGGATCACAATGTGTCAAA+AGG - chr1_2:18272823-18272842 Msa0060510:intron 35.0%
TGCTCTATATCTCAGTTTAG+TGG - chr1_2:18273059-18273078 Msa0060510:CDS 35.0%
!!! AATTGGTCCTTTTGCTGTTT+CGG + chr1_2:18273358-18273377 None:intergenic 35.0%
CTGTTGCTGGTCAATATAAT+TGG + chr1_2:18273375-18273394 None:intergenic 35.0%
TTGTTAACGGTATGTGCTTT+AGG - chr1_2:18273561-18273580 Msa0060510:intron 35.0%
ATCTCTAACCCCTTAAAAGA+AGG - chr1_2:18273584-18273603 Msa0060510:intron 35.0%
TCTCTAACCCCTTAAAAGAA+GGG - chr1_2:18273585-18273604 Msa0060510:intron 35.0%
! CCATTTTCCCTTCTTTTAAG+GGG + chr1_2:18273595-18273614 None:intergenic 35.0%
CCATTGGGGAAAAGATAAAT+GGG + chr1_2:18274073-18274092 None:intergenic 35.0%
TCCATTGGGGAAAAGATAAA+TGG + chr1_2:18274074-18274093 None:intergenic 35.0%
! TTATCTTTTCCCCAATGGAA+TGG - chr1_2:18274075-18274094 Msa0060510:intron 35.0%
TACTACAAAAGATGATACCC+TGG - chr1_2:18274195-18274214 Msa0060510:CDS 35.0%
! TTAGTTTGGATAACTCTGAG+GGG + chr1_2:18274226-18274245 None:intergenic 35.0%
GACTTCGTTCTCAATTAGTT+TGG + chr1_2:18274240-18274259 None:intergenic 35.0%
! TTCCATTGTAGCTATTGACT+TGG + chr1_2:18274264-18274283 None:intergenic 35.0%
ACTTAGATGTTCAGTGTATG+GGG - chr1_2:18274345-18274364 Msa0060510:intron 35.0%
! ATTGACTTTCAAACTCACCA+CGG + chr1_2:18274415-18274434 None:intergenic 35.0%
! AAATCTTGATTCTGGAAACC+AGG + chr1_2:18274777-18274796 None:intergenic 35.0%
TCGGAAACAAATCTTGATTC+TGG + chr1_2:18274785-18274804 None:intergenic 35.0%
TTACTCAGAGAAACATCTAC+CGG + chr1_2:18274875-18274894 None:intergenic 35.0%
!! AAATCTGGTGCTATTTCTCT+TGG + chr1_2:18274995-18275014 None:intergenic 35.0%
ATGCTGTCATCACAAAAATC+TGG + chr1_2:18275010-18275029 None:intergenic 35.0%
! AGATTTTTGTGATGACAGCA+TGG - chr1_2:18275009-18275028 Msa0060510:intron 35.0%
!! AAGTTGTTAAGCTTGCTAGT+GGG - chr1_2:18275206-18275225 Msa0060510:intron 35.0%
TGATAATATGCTGAACATGC+AGG - chr1_2:18275344-18275363 Msa0060510:intron 35.0%
GATAATATGCTGAACATGCA+GGG - chr1_2:18275345-18275364 Msa0060510:intron 35.0%
AGACATAACTTCAGAGATGT+TGG - chr1_2:18275521-18275540 Msa0060510:CDS 35.0%
!! TTTTGGGAAGTTATCTAGAC+AGG - chr1_2:18275566-18275585 Msa0060510:CDS 35.0%
! ACTATAGCTACTCATGGTTT+TGG + chr1_2:18275598-18275617 None:intergenic 35.0%
CTCTTTACTATAGCTACTCA+TGG + chr1_2:18275604-18275623 None:intergenic 35.0%
TATTGCATGCTGCTAAATTG+AGG + chr1_2:18275738-18275757 None:intergenic 35.0%
! CACAAGGTGTTAAAAAGATG+AGG - chr1_2:18275901-18275920 Msa0060510:CDS 35.0%
GGTGTTAAAAAGATGAGGAA+AGG - chr1_2:18275906-18275925 Msa0060510:CDS 35.0%
TCTTAATGTTTCAATGCAGG+CGG - chr1_2:18276015-18276034 Msa0060510:intron 35.0%
CACAACAATGATATATCGTC+AGG + chr1_2:18276083-18276102 None:intergenic 35.0%
TATTATGATCATCATGGGTC+GGG - chr1_2:18276316-18276335 Msa0060510:exon 35.0%
GGAATTAGGGTTCAATTTGG+GGG + chr1_2:18267788-18267807 None:intergenic 40.0%
GTTCATGGTGTGAGGAATTA+GGG + chr1_2:18267801-18267820 None:intergenic 40.0%
TGTTCATGGTGTGAGGAATT+AGG + chr1_2:18267802-18267821 None:intergenic 40.0%
!! CTGATTCGGTGAATTGACAT+CGG + chr1_2:18267831-18267850 None:intergenic 40.0%
!! TCAGCTACTGGTTTCTGATT+CGG + chr1_2:18267845-18267864 None:intergenic 40.0%
! TGTTGTTGTTGTTCAGCTAC+TGG + chr1_2:18267857-18267876 None:intergenic 40.0%
GTAGCTGAACAACAACAACA+AGG - chr1_2:18267857-18267876 Msa0060510:three_prime_UTR 40.0%
!!! CTCTTCTTGAAGGTGTTTTC+CGG + chr1_2:18267893-18267912 None:intergenic 40.0%
! AGGGGATTTTCTCTTCTTGA+AGG + chr1_2:18267903-18267922 None:intergenic 40.0%
! CGTTGATTAAATTACCCTGG+AGG + chr1_2:18267951-18267970 None:intergenic 40.0%
!! TTAACCGACCCGTTTTTCTT+CGG + chr1_2:18268162-18268181 None:intergenic 40.0%
AAGAAAAACGGGTCGGTTAA+TGG - chr1_2:18268162-18268181 Msa0060510:intron 40.0%
GTTAATGGAGTTAAGGGAAC+TGG - chr1_2:18268177-18268196 Msa0060510:intron 40.0%
!! TGGCTCGGAAAATTGATTTG+CGG - chr1_2:18268211-18268230 Msa0060510:CDS 40.0%
!! TCGGAAAATTGATTTGCGGT+TGG - chr1_2:18268215-18268234 Msa0060510:CDS 40.0%
!! GAAAATTGATTTGCGGTTGG+AGG - chr1_2:18268218-18268237 Msa0060510:CDS 40.0%
GAGGTTAGTGTTCGATTCAT+CGG - chr1_2:18268255-18268274 Msa0060510:CDS 40.0%
! TGTTCGATTCATCGGAGTTT+TGG - chr1_2:18268263-18268282 Msa0060510:CDS 40.0%
GACTGTGAGTTTGTGTAAGT+TGG - chr1_2:18268378-18268397 Msa0060510:intron 40.0%
GGAAAATTCGAGGATGTTTG+CGG - chr1_2:18268470-18268489 Msa0060510:intron 40.0%
GAAAATTCGAGGATGTTTGC+GGG - chr1_2:18268471-18268490 Msa0060510:intron 40.0%
! TCCGTTCTTTTCGTTGTGTA+AGG - chr1_2:18268506-18268525 Msa0060510:CDS 40.0%
! GTTCTTTTCGTTGTGTAAGG+TGG - chr1_2:18268509-18268528 Msa0060510:CDS 40.0%
TGATGTATGAAGCACGGATA+CGG - chr1_2:18268833-18268852 Msa0060510:intron 40.0%
! CTGGAGTGATTGGACATTTT+TGG - chr1_2:18269189-18269208 Msa0060510:CDS 40.0%
TGGACTACAATCTACAATGG+TGG + chr1_2:18269221-18269240 None:intergenic 40.0%
! AGACAAGGCATTCTGAGAAA+TGG + chr1_2:18269332-18269351 None:intergenic 40.0%
ATCATGTGTTCTGACTGTGT+AGG + chr1_2:18269373-18269392 None:intergenic 40.0%
AGGGCATGTTTCTTTCTCAT+TGG + chr1_2:18269425-18269444 None:intergenic 40.0%
!! AGAAACATGCCCTTTAAAGC+TGG - chr1_2:18269432-18269451 Msa0060510:CDS 40.0%
AAAGCTGGAAGATGCTAAAG+TGG - chr1_2:18269447-18269466 Msa0060510:CDS 40.0%
TTACCAACAGTTGTGCAAAG+GGG + chr1_2:18269522-18269541 None:intergenic 40.0%
GATTACCAACAGTTGTGCAA+AGG + chr1_2:18269524-18269543 None:intergenic 40.0%
!! TGCACAACTGTTGGTAATCA+TGG - chr1_2:18269525-18269544 Msa0060510:CDS 40.0%
! CATGGAAACTAGTTTAGAGG+GGG - chr1_2:18269543-18269562 Msa0060510:CDS 40.0%
ATGAAGGCAGTACTGTATCA+GGG - chr1_2:18269639-18269658 Msa0060510:CDS 40.0%
CTGAGTGAAATTAGTCAGGT+CGG + chr1_2:18269730-18269749 None:intergenic 40.0%
CTGCCAAAGTTGTGAAGATA+AGG - chr1_2:18269932-18269951 Msa0060510:CDS 40.0%
! CAGCCTTATCTTCACAACTT+TGG + chr1_2:18269938-18269957 None:intergenic 40.0%
CAGAAAGGATTCCTCTAACA+AGG - chr1_2:18270202-18270221 Msa0060510:intron 40.0%
GTCAGTTTGATCCTTGTTAG+AGG + chr1_2:18270216-18270235 None:intergenic 40.0%
GATCAAACTGACATACCAGA+TGG - chr1_2:18270224-18270243 Msa0060510:intron 40.0%
TGCTTCAAAAGATGTTAGCG+AGG - chr1_2:18270280-18270299 Msa0060510:intron 40.0%
TTCAAAAGATGTTAGCGAGG+AGG - chr1_2:18270283-18270302 Msa0060510:intron 40.0%
TCAAAAGATGTTAGCGAGGA+GGG - chr1_2:18270284-18270303 Msa0060510:intron 40.0%
CAGAAGGTTCAAACGTGAAA+TGG + chr1_2:18270439-18270458 None:intergenic 40.0%
! CAAAAGCACAACAGAAGACA+TGG + chr1_2:18270534-18270553 None:intergenic 40.0%
AACCTCAAACCCTTGTTCTT+GGG + chr1_2:18271061-18271080 None:intergenic 40.0%
AAACCTCAAACCCTTGTTCT+TGG + chr1_2:18271062-18271081 None:intergenic 40.0%
!! ACAAGGGTTTGAGGTTTTAG+AGG - chr1_2:18271065-18271084 Msa0060510:intron 40.0%
! GTAATTTGTGGGCGAGTAAA+CGG + chr1_2:18271369-18271388 None:intergenic 40.0%
ACCTTTACCACCTTGCATAA+GGG - chr1_2:18271454-18271473 Msa0060510:intron 40.0%
! GTTGATTAGTCCCTTATGCA+AGG + chr1_2:18271467-18271486 None:intergenic 40.0%
! ATCTTTTGGTCAGAGTGAGA+AGG + chr1_2:18271571-18271590 None:intergenic 40.0%
TGCAAGCTACAATCAGAGTT+AGG - chr1_2:18271757-18271776 Msa0060510:intron 40.0%
! CTGAGCTTGGTGAAACTTAT+AGG + chr1_2:18271894-18271913 None:intergenic 40.0%
!! TTCTCAATAAGTGCTGAGCT+TGG + chr1_2:18271907-18271926 None:intergenic 40.0%
AGGCAGAATATAAGCAACAC+AGG + chr1_2:18271991-18272010 None:intergenic 40.0%
TGGTGAAAACTAGGATTAGG+TGG - chr1_2:18272073-18272092 Msa0060510:intron 40.0%
AGTAAGGAGGGTAGATAAGA+TGG - chr1_2:18272131-18272150 Msa0060510:intron 40.0%
! AAGCCTTATCCCTTTAAGTG+GGG + chr1_2:18272299-18272318 None:intergenic 40.0%
! CAAGCCTTATCCCTTTAAGT+GGG + chr1_2:18272300-18272319 None:intergenic 40.0%
! ATCAGTTTTTGTCTGCATGG+AGG + chr1_2:18272354-18272373 None:intergenic 40.0%
! GCACTTTCTGCACTTTTAGA+GGG + chr1_2:18272426-18272445 None:intergenic 40.0%
! AGCACTTTCTGCACTTTTAG+AGG + chr1_2:18272427-18272446 None:intergenic 40.0%
!!! AAGTGCAGAAAGTGCTTTTG+TGG - chr1_2:18272431-18272450 Msa0060510:intron 40.0%
!!! GAAAGTGCTTTTGTGGAGTT+AGG - chr1_2:18272438-18272457 Msa0060510:intron 40.0%
GTATCAAGAGTCATACCCTA+AGG - chr1_2:18272462-18272481 Msa0060510:intron 40.0%
TTTACTGCCTGATCCTCAAT+AGG - chr1_2:18272574-18272593 Msa0060510:intron 40.0%
! ACTGCTGTCAAGCAGTATTT+TGG - chr1_2:18272792-18272811 Msa0060510:intron 40.0%
!! CAGTATTTTGGAGATGCTCT+TGG - chr1_2:18272804-18272823 Msa0060510:intron 40.0%
TCTTTAACATTAGGCGAAGC+TGG + chr1_2:18273132-18273151 None:intergenic 40.0%
ATGATAACCCTATCCGATGA+TGG - chr1_2:18273183-18273202 Msa0060510:intron 40.0%
! ATCCTTTTTCCTGAAGATCG+TGG - chr1_2:18273306-18273325 Msa0060510:intron 40.0%
ATCCACGATCTTCAGGAAAA+AGG + chr1_2:18273311-18273330 None:intergenic 40.0%
TGTTTCGGCAATGTGTTGTA+TGG + chr1_2:18273343-18273362 None:intergenic 40.0%
ATATGCAAACTCACTGTTGC+TGG + chr1_2:18273388-18273407 None:intergenic 40.0%
! GTTGCTTCGTCACTTGTTAA+CGG - chr1_2:18273548-18273567 Msa0060510:intron 40.0%
CCCCTTAAAAGAAGGGAAAA+TGG - chr1_2:18273592-18273611 Msa0060510:intron 40.0%
GAATATCTCTGTCACAAGAC+TGG + chr1_2:18273715-18273734 None:intergenic 40.0%
! CCCATTTATCTTTTCCCCAA+TGG - chr1_2:18274070-18274089 Msa0060510:intron 40.0%
TTTCACCAAGCCATTCCATT+GGG + chr1_2:18274088-18274107 None:intergenic 40.0%
AATGTCTGCACTTTCTTGTC+TGG + chr1_2:18274134-18274153 None:intergenic 40.0%
! CTCACTTCCTTTTGATCTTG+AGG - chr1_2:18274160-18274179 Msa0060510:CDS 40.0%
AATGGAAAACCACTCAAGCT+GGG - chr1_2:18274277-18274296 Msa0060510:intron 40.0%
AGAGCTTTGCATCAATGAGA+AGG - chr1_2:18274316-18274335 Msa0060510:intron 40.0%
ATTAGATCTATTCCAGACCG+TGG - chr1_2:18274395-18274414 Msa0060510:intron 40.0%
! ATATAGTTGTTCTGGACCCT+CGG - chr1_2:18274454-18274473 Msa0060510:CDS 40.0%
ATCCTTATCCATAGCATCAG+TGG + chr1_2:18274525-18274544 None:intergenic 40.0%
AGAATCAGTGTTGCCTTCAA+GGG + chr1_2:18274600-18274619 None:intergenic 40.0%
AAGAATCAGTGTTGCCTTCA+AGG + chr1_2:18274601-18274620 None:intergenic 40.0%
!! TTCTGGTTTGGAAGATTCAG+AGG - chr1_2:18274679-18274698 Msa0060510:CDS 40.0%
TGACAAACGCTGAAAGAGAA+TGG + chr1_2:18274908-18274927 None:intergenic 40.0%
!! TGTTGACTCTAGTCCATCTA+TGG - chr1_2:18275099-18275118 Msa0060510:intron 40.0%
! ACTGTATCGATCTCCATAGA+TGG + chr1_2:18275115-18275134 None:intergenic 40.0%
TCGATACAGTGCAAAATGTG+TGG - chr1_2:18275125-18275144 Msa0060510:intron 40.0%
ATACAGTGCAAAATGTGTGG+AGG - chr1_2:18275128-18275147 Msa0060510:intron 40.0%
!! GAAGTTGTTAAGCTTGCTAG+TGG - chr1_2:18275205-18275224 Msa0060510:intron 40.0%
AAACGTCTCTTCATCAGACA+GGG + chr1_2:18275391-18275410 None:intergenic 40.0%
TAAACGTCTCTTCATCAGAC+AGG + chr1_2:18275392-18275411 None:intergenic 40.0%
CTGATGAAGAGACGTTTAGT+TGG - chr1_2:18275394-18275413 Msa0060510:intron 40.0%
ATGTCAACTGTTGCTGTACA+TGG - chr1_2:18275435-18275454 Msa0060510:intron 40.0%
!!! GAAATTGGGTTTTGAGGACA+GGG - chr1_2:18275497-18275516 Msa0060510:CDS 40.0%
ACGACCGAAGAAACAATAAG+AGG - chr1_2:18275637-18275656 Msa0060510:CDS 40.0%
ATCTTGCAGGAACAATGGAT+CGG + chr1_2:18275794-18275813 None:intergenic 40.0%
TGATGATCTTGCAGGAACAA+TGG + chr1_2:18275799-18275818 None:intergenic 40.0%
TCCTGCAAGATCATCAACAA+CGG - chr1_2:18275803-18275822 Msa0060510:intron 40.0%
GCGCCAAATTTCAATTTCAG+AGG - chr1_2:18275866-18275885 Msa0060510:intron 40.0%
GCTGAACATTATTTGAGCAG+AGG - chr1_2:18276041-18276060 Msa0060510:intron 40.0%
! TTGATGATTGGCATAGGAGT+AGG - chr1_2:18276267-18276286 Msa0060510:CDS 40.0%
GGGGTGGAATTGAGAAATTG+GGG + chr1_2:18267769-18267788 None:intergenic 45.0%
GGGGGTGGAATTGAGAAATT+GGG + chr1_2:18267770-18267789 None:intergenic 45.0%
TGGGGGTGGAATTGAGAAAT+TGG + chr1_2:18267771-18267790 None:intergenic 45.0%
ATTAGGGTTCAATTTGGGGG+TGG + chr1_2:18267785-18267804 None:intergenic 45.0%
! TCGGTGAATTGACATCGGTT+GGG + chr1_2:18267826-18267845 None:intergenic 45.0%
TTCGGTGAATTGACATCGGT+TGG + chr1_2:18267827-18267846 None:intergenic 45.0%
ACAACAAGGATCATGCACTC+CGG - chr1_2:18267871-18267890 Msa0060510:three_prime_UTR 45.0%
!! TCCGAGGAGTGGATTTTGAA+GGG + chr1_2:18267922-18267941 None:intergenic 45.0%
!! TTCCGAGGAGTGGATTTTGA+AGG + chr1_2:18267923-18267942 None:intergenic 45.0%
TCCTCGGAAAAAAACCTCCA+GGG - chr1_2:18267934-18267953 Msa0060510:three_prime_UTR 45.0%
GGGTCGGTTAATGGAGTTAA+GGG - chr1_2:18268171-18268190 Msa0060510:intron 45.0%
CAGTTTGTCTGCTGCTAAGA+GGG - chr1_2:18268566-18268585 Msa0060510:CDS 45.0%
GAGAGTGGAAGAACTAACTG+TGG - chr1_2:18268588-18268607 Msa0060510:CDS 45.0%
! TGTCAGTGTTGTGTTGGTGT+CGG - chr1_2:18268936-18268955 Msa0060510:CDS 45.0%
TGGGTGAGCTCTCACTTAAA+GGG + chr1_2:18269083-18269102 None:intergenic 45.0%
TGAGAGCTCACCCACTTTAT+TGG - chr1_2:18269089-18269108 Msa0060510:CDS 45.0%
CATCTCTTGACTGGAGTGAT+TGG - chr1_2:18269179-18269198 Msa0060510:CDS 45.0%
CTGAGAAATGGATGTGCTTG+AGG + chr1_2:18269320-18269339 None:intergenic 45.0%
! TTGGCTAGAGCTGAGTTTTC+TGG + chr1_2:18269406-18269425 None:intergenic 45.0%
TACCAACAGTTGTGCAAAGG+GGG + chr1_2:18269521-18269540 None:intergenic 45.0%
TTATTACCAGGACTTGGAGG+TGG - chr1_2:18269616-18269635 Msa0060510:CDS 45.0%
GATGAAGGCAGTACTGTATC+AGG - chr1_2:18269638-18269657 Msa0060510:CDS 45.0%
! TGGCTCAGCATCTGATTTTC+TGG + chr1_2:18269678-18269697 None:intergenic 45.0%
TGAATGTTGTACCTACTCGG+TGG + chr1_2:18269698-18269717 None:intergenic 45.0%
TTCCCTCGGTAGTTTAGCAA+TGG - chr1_2:18269751-18269770 Msa0060510:CDS 45.0%
TCCCTCGGTAGTTTAGCAAT+GGG - chr1_2:18269752-18269771 Msa0060510:CDS 45.0%
TCCCATTGCTAAACTACCGA+GGG + chr1_2:18269756-18269775 None:intergenic 45.0%
ATCCCATTGCTAAACTACCG+AGG + chr1_2:18269757-18269776 None:intergenic 45.0%
CAAGGGAAAACCTCACTATC+AGG + chr1_2:18269887-18269906 None:intergenic 45.0%
ATAAGGCTGAGAGCAGCTTA+TGG - chr1_2:18269949-18269968 Msa0060510:CDS 45.0%
CAAACCAACAAAAGCCTCAG+AGG - chr1_2:18269983-18270002 Msa0060510:intron 45.0%
CTAGAAATGTCAGACCTCTG+AGG + chr1_2:18270000-18270019 None:intergenic 45.0%
CCAGTCACGCAAGAAATTCA+GGG + chr1_2:18270150-18270169 None:intergenic 45.0%
ACCAGTCACGCAAGAAATTC+AGG + chr1_2:18270151-18270170 None:intergenic 45.0%
! TGCGTGACTGGTTACATCAT+TGG - chr1_2:18270159-18270178 Msa0060510:intron 45.0%
ACTGACATACCAGATGGTGA+TGG - chr1_2:18270230-18270249 Msa0060510:intron 45.0%
CAACTGTGACATACACTCGA+TGG - chr1_2:18270369-18270388 Msa0060510:CDS 45.0%
GAGTCTGTCATATTGCAGAG+TGG - chr1_2:18271009-18271028 Msa0060510:CDS 45.0%
TATGCTTGTGCCCAAGAACA+AGG - chr1_2:18271048-18271067 Msa0060510:intron 45.0%
ATGCTTGTGCCCAAGAACAA+GGG - chr1_2:18271049-18271068 Msa0060510:intron 45.0%
CACCTTTACCACCTTGCATA+AGG - chr1_2:18271453-18271472 Msa0060510:intron 45.0%
TCCCTTATGCAAGGTGGTAA+AGG + chr1_2:18271458-18271477 None:intergenic 45.0%
! GATTAGTCCCTTATGCAAGG+TGG + chr1_2:18271464-18271483 None:intergenic 45.0%
! TGGTCAGAGTGAGAAGGTTT+TGG + chr1_2:18271565-18271584 None:intergenic 45.0%
!! TTCCTGCACTGACCATTTTG+TGG - chr1_2:18271786-18271805 Msa0060510:intron 45.0%
! AGCAGGCTTTCACTGTTTTC+AGG - chr1_2:18272024-18272043 Msa0060510:intron 45.0%
! GCAGGCTTTCACTGTTTTCA+GGG - chr1_2:18272025-18272044 Msa0060510:intron 45.0%
AAGGAGGGTAGATAAGATGG+AGG - chr1_2:18272134-18272153 Msa0060510:intron 45.0%
AGGAGGGTAGATAAGATGGA+GGG - chr1_2:18272135-18272154 Msa0060510:intron 45.0%
GAGGGTAGTCAAATCACTAG+AGG - chr1_2:18272153-18272172 Msa0060510:intron 45.0%
AGTCAAATCACTAGAGGCAG+AGG - chr1_2:18272159-18272178 Msa0060510:intron 45.0%
!! TTTAAGTGGGGTGGGCTATA+TGG + chr1_2:18272287-18272306 None:intergenic 45.0%
ATATAGCCCACCCCACTTAA+AGG - chr1_2:18272286-18272305 Msa0060510:intron 45.0%
TATAGCCCACCCCACTTAAA+GGG - chr1_2:18272287-18272306 Msa0060510:intron 45.0%
CTTATCCCTTTAAGTGGGGT+GGG + chr1_2:18272295-18272314 None:intergenic 45.0%
! CCAAGCCTTATCCCTTTAAG+TGG + chr1_2:18272301-18272320 None:intergenic 45.0%
CCACTTAAAGGGATAAGGCT+TGG - chr1_2:18272298-18272317 Msa0060510:intron 45.0%
! AGTTTTTGTCTGCATGGAGG+AGG + chr1_2:18272351-18272370 None:intergenic 45.0%
!! GCTTTTAATGTTGGCTGGAC+TGG - chr1_2:18272913-18272932 Msa0060510:intron 45.0%
GAAGAAGGTCTCTTTCTCAG+TGG + chr1_2:18272955-18272974 None:intergenic 45.0%
ATGAGCTCCATCATCGGATA+GGG + chr1_2:18273193-18273212 None:intergenic 45.0%
GCAATACATCCACGATCTTC+AGG + chr1_2:18273318-18273337 None:intergenic 45.0%
CACATTGCCGAAACAGCAAA+AGG - chr1_2:18273348-18273367 Msa0060510:intron 45.0%
CGAAGCAACTCATCTGGAAA+TGG + chr1_2:18273537-18273556 None:intergenic 45.0%
AAGTGACGAAGCAACTCATC+TGG + chr1_2:18273543-18273562 None:intergenic 45.0%
!! TTCGACGTTGACTTCTTCTG+TGG + chr1_2:18273669-18273688 None:intergenic 45.0%
CCAGAACTGAAGATGCAGAA+TGG + chr1_2:18273744-18273763 None:intergenic 45.0%
CCATTCTGCATCTTCAGTTC+TGG - chr1_2:18273741-18273760 Msa0060510:intron 45.0%
! TTTTCCCCAATGGAATGGCT+TGG - chr1_2:18274080-18274099 Msa0060510:intron 45.0%
TTCACCAAGCCATTCCATTG+GGG + chr1_2:18274087-18274106 None:intergenic 45.0%
GTTTCACCAAGCCATTCCAT+TGG + chr1_2:18274089-18274108 None:intergenic 45.0%
! CTTCCTTTTGATCTTGAGGC+TGG - chr1_2:18274164-18274183 Msa0060510:CDS 45.0%
TGACCAGCCTCAAGATCAAA+AGG + chr1_2:18274170-18274189 None:intergenic 45.0%
CGCCAAGTCAATAGCTACAA+TGG - chr1_2:18274259-18274278 Msa0060510:intron 45.0%
CAATGGAAAACCACTCAAGC+TGG - chr1_2:18274276-18274295 Msa0060510:intron 45.0%
AAAACCACTCAAGCTGGGAA+GGG - chr1_2:18274282-18274301 Msa0060510:intron 45.0%
!! AAGCTGGGAAGGGTTAGTTA+AGG - chr1_2:18274292-18274311 Msa0060510:intron 45.0%
GGTAACATCCTCTTGGCAAA+AGG - chr1_2:18274475-18274494 Msa0060510:CDS 45.0%
! ACTTTGGTCCTTTTGCCAAG+AGG + chr1_2:18274486-18274505 None:intergenic 45.0%
AGTGATGTCCACTGATGCTA+TGG - chr1_2:18274514-18274533 Msa0060510:intron 45.0%
GTCCACTGATGCTATGGATA+AGG - chr1_2:18274520-18274539 Msa0060510:intron 45.0%
TACAAGAGACAGTCCCTTGA+AGG - chr1_2:18274584-18274603 Msa0060510:intron 45.0%
! AGCTATGCCAGTACGTCTTT+TGG - chr1_2:18274644-18274663 Msa0060510:intron 45.0%
TAGCTCACCAAAAGACGTAC+TGG + chr1_2:18274654-18274673 None:intergenic 45.0%
TTTGGTGAGCTACTGCATTC+TGG - chr1_2:18274662-18274681 Msa0060510:intron 45.0%
! TGAGCTACTGCATTCTGGTT+TGG - chr1_2:18274667-18274686 Msa0060510:CDS 45.0%
! TGGTTTGGAAGATTCAGAGG+TGG - chr1_2:18274682-18274701 Msa0060510:CDS 45.0%
GAGTCTACAGTTGTGTCTTC+TGG - chr1_2:18274833-18274852 Msa0060510:CDS 45.0%
TCTACAGTTGTGTCTTCTGG+TGG - chr1_2:18274836-18274855 Msa0060510:CDS 45.0%
AAACATCTACCGGACAAGCA+AGG + chr1_2:18274865-18274884 None:intergenic 45.0%
! ATCTGGATCTTGAGGCACTT+TGG + chr1_2:18274939-18274958 None:intergenic 45.0%
AGTGCCTCAAGATCCAGATT+TGG - chr1_2:18274940-18274959 Msa0060510:CDS 45.0%
ACCACCAAATCTGGATCTTG+AGG + chr1_2:18274947-18274966 None:intergenic 45.0%
TCAGTAGTCACCACCAAATC+TGG + chr1_2:18274956-18274975 None:intergenic 45.0%
! GCTGAACATGCAGGGTATTA+TGG - chr1_2:18275353-18275372 Msa0060510:intron 45.0%
TCTTCATCAGACAGGGAAGT+TGG + chr1_2:18275384-18275403 None:intergenic 45.0%
TGCCAAGCATATAGCAGAAG+CGG - chr1_2:18275470-18275489 Msa0060510:intron 45.0%
! GGGATCGAAATTGGGTTTTG+AGG - chr1_2:18275491-18275510 Msa0060510:intron 45.0%
!!! CGAAATTGGGTTTTGAGGAC+AGG - chr1_2:18275496-18275515 Msa0060510:intron 45.0%
!!! AGCTACTCATGGTTTTGGTG+TGG + chr1_2:18275593-18275612 None:intergenic 45.0%
GAGGATTTCCGCATTTCACA+AGG - chr1_2:18275885-18275904 Msa0060510:CDS 45.0%
!! ATTAAAATAAAATTGAATTA+AGG + chr1_2:18272977-18272996 None:intergenic 5.0%
! GTTGGGTTGTTCATGGTGTG+AGG + chr1_2:18267809-18267828 None:intergenic 50.0%
! GACATCGGTTGGGTTGTTCA+TGG + chr1_2:18267816-18267835 None:intergenic 50.0%
!! CCGAGGAGTGGATTTTGAAG+GGG + chr1_2:18267921-18267940 None:intergenic 50.0%
CCCCTTCAAAATCCACTCCT+CGG - chr1_2:18267918-18267937 Msa0060510:three_prime_UTR 50.0%
!!! GGAGGTTTTTTTCCGAGGAG+TGG + chr1_2:18267933-18267952 None:intergenic 50.0%
CTCCTCGGAAAAAAACCTCC+AGG - chr1_2:18267933-18267952 Msa0060510:three_prime_UTR 50.0%
!!! ACCCTGGAGGTTTTTTTCCG+AGG + chr1_2:18267938-18267957 None:intergenic 50.0%
TACGCCGAAGAAAAACGGGT+CGG - chr1_2:18268155-18268174 Msa0060510:intron 50.0%
CGGGTCGGTTAATGGAGTTA+AGG - chr1_2:18268170-18268189 Msa0060510:intron 50.0%
! TCAATTTTCCGAGCCACGTC+AGG + chr1_2:18268207-18268226 None:intergenic 50.0%
GCAGTTTGTCTGCTGCTAAG+AGG - chr1_2:18268565-18268584 Msa0060510:CDS 50.0%
GTGGGTGAGCTCTCACTTAA+AGG + chr1_2:18269084-18269103 None:intergenic 50.0%
AACAGTTGTGCAAAGGGGGA+AGG + chr1_2:18269517-18269536 None:intergenic 50.0%
TTCCCCCTTTGCACAACTGT+TGG - chr1_2:18269516-18269535 Msa0060510:CDS 50.0%
!!! CAGACCTCTGAGGCTTTTGT+TGG + chr1_2:18269990-18270009 None:intergenic 50.0%
CCCTGAATTTCTTGCGTGAC+TGG - chr1_2:18270147-18270166 Msa0060510:intron 50.0%
TGCCCAAGAACAAGGGTTTG+AGG - chr1_2:18271056-18271075 Msa0060510:intron 50.0%
AGCCACAAAATGGTCAGTGC+AGG + chr1_2:18271791-18271810 None:intergenic 50.0%
CCTTATCCCTTTAAGTGGGG+TGG + chr1_2:18272296-18272315 None:intergenic 50.0%
CCACCCCACTTAAAGGGATA+AGG - chr1_2:18272293-18272312 Msa0060510:intron 50.0%
AAATGATGTGGCGTGCGTCT+TGG - chr1_2:18272609-18272628 Msa0060510:intron 50.0%
!! AATGTTGGCTGGACTGGTTC+TGG - chr1_2:18272919-18272938 Msa0060510:intron 50.0%
CATGAGCTCCATCATCGGAT+AGG + chr1_2:18273194-18273213 None:intergenic 50.0%
!! CTATCCGATGATGGAGCTCA+TGG - chr1_2:18273192-18273211 Msa0060510:intron 50.0%
AGGACCATGAGCTCCATCAT+CGG + chr1_2:18273199-18273218 None:intergenic 50.0%
!! AACTTCTGAGACGTTCCACC+AGG + chr1_2:18273219-18273238 None:intergenic 50.0%
CGACGGCCTACAAAATGTTG+TGG - chr1_2:18273924-18273943 Msa0060510:CDS 50.0%
! AACTCTGAGGGGAAACTCCA+GGG + chr1_2:18274215-18274234 None:intergenic 50.0%
! TAACTCTGAGGGGAAACTCC+AGG + chr1_2:18274216-18274235 None:intergenic 50.0%
GAAAACCACTCAAGCTGGGA+AGG - chr1_2:18274281-18274300 Msa0060510:intron 50.0%
CTTTCAAACTCACCACGGTC+TGG + chr1_2:18274410-18274429 None:intergenic 50.0%
TGCCAAGAGGATGTTACCGA+GGG + chr1_2:18274473-18274492 None:intergenic 50.0%
TTGCCAAGAGGATGTTACCG+AGG + chr1_2:18274474-18274493 None:intergenic 50.0%
TTTCAGCGTTTGTCAGCGCT+TGG - chr1_2:18274913-18274932 Msa0060510:CDS 50.0%
GCCTCAAGATCCAGATTTGG+TGG - chr1_2:18274943-18274962 Msa0060510:CDS 50.0%
AGTGACTGCACTCATCCATC+GGG + chr1_2:18275054-18275073 None:intergenic 50.0%
GAGTGACTGCACTCATCCAT+CGG + chr1_2:18275055-18275074 None:intergenic 50.0%
TCATCAGACAGGGAAGTTGG+AGG + chr1_2:18275381-18275400 None:intergenic 50.0%
GCCAAGCATATAGCAGAAGC+GGG - chr1_2:18275471-18275490 Msa0060510:intron 50.0%
TCCCGCTTCTGCTATATGCT+TGG + chr1_2:18275475-18275494 None:intergenic 50.0%
AGCAGAAGCGGGATCGAAAT+TGG - chr1_2:18275482-18275501 Msa0060510:intron 50.0%
GCAGAAGCGGGATCGAAATT+GGG - chr1_2:18275483-18275502 Msa0060510:intron 50.0%
!! GCCGTTGTTGATGATCTTGC+AGG + chr1_2:18275807-18275826 None:intergenic 50.0%
TTCACAGTATGCTGCTAGCG+TGG - chr1_2:18276130-18276149 Msa0060510:intron 50.0%
GGAGGCGAAATTGTCAGCTG+AGG - chr1_2:18268236-18268255 Msa0060510:CDS 55.0%
TCTGCTGCTAAGAGGGAGAG+TGG - chr1_2:18268573-18268592 Msa0060510:CDS 55.0%
TGAAGCACGGATACGGACAC+CGG - chr1_2:18268840-18268859 Msa0060510:intron 55.0%
GTCAGTGTCCATGTCGTGTC+CGG + chr1_2:18268862-18268881 None:intergenic 55.0%
CACAACCACGTGTCTGACAC+CGG - chr1_2:18268960-18268979 Msa0060510:CDS 55.0%
ACAACCACGTGTCTGACACC+GGG - chr1_2:18268961-18268980 Msa0060510:CDS 55.0%
TCCTCGAATTAGGCGTGTCC+CGG + chr1_2:18268982-18269001 None:intergenic 55.0%
GCACGGACACTCCTCGAATT+AGG + chr1_2:18268992-18269011 None:intergenic 55.0%
CTTCATCCACCTCCAAGTCC+TGG + chr1_2:18269625-18269644 None:intergenic 55.0%
CAGGACTTGGAGGTGGATGA+AGG - chr1_2:18269623-18269642 Msa0060510:CDS 55.0%
CTAGAGGCAGAGGAAGACGT+AGG - chr1_2:18272169-18272188 Msa0060510:intron 55.0%
CATTAGGCGAAGCTGGAGCT+TGG + chr1_2:18273125-18273144 None:intergenic 55.0%
!! GATGATGGAGCTCATGGTCC+TGG - chr1_2:18273198-18273217 Msa0060510:intron 55.0%
GTCTTCTGTGGACAACCTGC+AGG - chr1_2:18273637-18273656 Msa0060510:intron 55.0%
CTAACCCTTCCCAGCTTGAG+TGG + chr1_2:18274289-18274308 None:intergenic 55.0%
GACCCTCGGTAACATCCTCT+TGG - chr1_2:18274468-18274487 Msa0060510:CDS 55.0%
! TGGTGGACACCTTGCTTGTC+CGG - chr1_2:18274853-18274872 Msa0060510:CDS 55.0%
CGCAGCTGTGTATAACCCGA+TGG - chr1_2:18275036-18275055 Msa0060510:intron 55.0%
CATGCCAGCTCAGAACAGAC+AGG - chr1_2:18275175-18275194 Msa0060510:intron 55.0%
! AGCACCTGTCTGTTCTGAGC+TGG + chr1_2:18275182-18275201 None:intergenic 55.0%
TACGGACACCGGACACGACA+TGG - chr1_2:18268851-18268870 Msa0060510:CDS 60.0%
ACCGGGACACGCCTAATTCG+AGG - chr1_2:18268978-18268997 Msa0060510:CDS 60.0%
CAGATGCTGAGCCACCGAGT+AGG - chr1_2:18269684-18269703 Msa0060510:CDS 60.0%
GATGGAGCTCATGGTCCTGG+TGG - chr1_2:18273201-18273220 Msa0060510:intron 60.0%
CTTCTGTGGCGCAAACCTGC+AGG + chr1_2:18273655-18273674 None:intergenic 60.0%
!! GGGAACTGGTTCGCCTGACG+TGG - chr1_2:18268191-18268210 Msa0060510:intron 65.0%
! CTGGTTCGCCTGACGTGGCT+CGG - chr1_2:18268196-18268215 Msa0060510:intron 65.0%
! GTGTCCCGGTGTCAGACACG+TGG + chr1_2:18268968-18268987 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 18267740 18276395 18267740 ID=Msa0060510;Name=Msa0060510
chr1_2 mRNA 18267740 18276395 18267740 ID=Msa0060510-mRNA-1;Parent=Msa0060510;Name=Msa0060510-mRNA-1;_AED=0.07;_eAED=0.07;_QI=75|1|1|1|1|1|16|226|1182
chr1_2 exon 18267740 18268101 18267740 ID=Msa0060510-mRNA-1:exon:7094;Parent=Msa0060510-mRNA-1
chr1_2 exon 18268204 18268386 18268204 ID=Msa0060510-mRNA-1:exon:7093;Parent=Msa0060510-mRNA-1
chr1_2 exon 18268477 18268769 18268477 ID=Msa0060510-mRNA-1:exon:7092;Parent=Msa0060510-mRNA-1
chr1_2 exon 18268847 18270000 18268847 ID=Msa0060510-mRNA-1:exon:7091;Parent=Msa0060510-mRNA-1
chr1_2 exon 18270347 18270476 18270347 ID=Msa0060510-mRNA-1:exon:7090;Parent=Msa0060510-mRNA-1
chr1_2 exon 18270566 18270657 18270566 ID=Msa0060510-mRNA-1:exon:7089;Parent=Msa0060510-mRNA-1
chr1_2 exon 18270742 18271061 18270742 ID=Msa0060510-mRNA-1:exon:7088;Parent=Msa0060510-mRNA-1
chr1_2 exon 18271291 18271370 18271291 ID=Msa0060510-mRNA-1:exon:7087;Parent=Msa0060510-mRNA-1
chr1_2 exon 18273049 18273108 18273049 ID=Msa0060510-mRNA-1:exon:7086;Parent=Msa0060510-mRNA-1
chr1_2 exon 18273789 18274007 18273789 ID=Msa0060510-mRNA-1:exon:7085;Parent=Msa0060510-mRNA-1
chr1_2 exon 18274131 18274215 18274131 ID=Msa0060510-mRNA-1:exon:7084;Parent=Msa0060510-mRNA-1
chr1_2 exon 18274430 18274509 18274430 ID=Msa0060510-mRNA-1:exon:7083;Parent=Msa0060510-mRNA-1
chr1_2 exon 18274667 18274966 18274667 ID=Msa0060510-mRNA-1:exon:7082;Parent=Msa0060510-mRNA-1
chr1_2 exon 18275497 18275664 18275497 ID=Msa0060510-mRNA-1:exon:7081;Parent=Msa0060510-mRNA-1
chr1_2 exon 18275878 18275985 18275878 ID=Msa0060510-mRNA-1:exon:7080;Parent=Msa0060510-mRNA-1
chr1_2 exon 18276180 18276395 18276180 ID=Msa0060510-mRNA-1:exon:7079;Parent=Msa0060510-mRNA-1
chr1_2 five_prime_UTR 18276321 18276395 18276321 ID=Msa0060510-mRNA-1:five_prime_utr;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18276180 18276320 18276180 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18275878 18275985 18275878 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18275497 18275664 18275497 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18274667 18274966 18274667 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18274430 18274509 18274430 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18274131 18274215 18274131 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18273789 18274007 18273789 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18273049 18273108 18273049 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18271291 18271370 18271291 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18270742 18271061 18270742 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18270566 18270657 18270566 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18270347 18270476 18270347 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18268847 18270000 18268847 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18268477 18268769 18268477 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18268204 18268386 18268204 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 CDS 18267966 18268101 18267966 ID=Msa0060510-mRNA-1:cds;Parent=Msa0060510-mRNA-1
chr1_2 three_prime_UTR 18267740 18267965 18267740 ID=Msa0060510-mRNA-1:three_prime_utr;Parent=Msa0060510-mRNA-1
Gene Sequence

>Msa0060510

ATGAACAACCCAACCGATGTCAATTCACCGAATCAGAAACCAGTAGCTGAACAACAACAACAAGGATCATGCACTCCGGAAAACACCTTCAAGAAGAGAAAATCCCCTTCAAAATCCACTCCTCGGAAAAAAACCTCCAGGAATAATACGCCGAAGAAAAACGGGTCGGTTAATGGAGTTAAGGGAACTGGTTCGCCTGACGTGGCTCGGAAAATTGATTTGCGGTTGGAGGCGAAATTGTCAGCTGAGGAAAATTCGAGGATGTTTGCGGGACGACAAATGCATCCGTTCTTTTCGTTGTGTAAGGTGGAAAAGAAATTTAAGGATTCGGGTGATTCTGAAAGCAGTTTGTCTGCTGCTAAGAGGGAGAGTGGAAGAACTAACTGTGGTCCTATTCATGTATTTGAAGATATTACGGATGATACTTCATCTCTTGACTGGAGTGATTGGACATTTTTGGGAAATGCCACCATTGTAGATTGTAGTCCAGAAAGTTCAAAATTTTCTGTTATGGAGGGTTCTGTTGAACCCTTAAATTTTGATAACTTTCTTAGTGGTGTAAAATCCTCAAGCACATCCATTTCTCAGAATGCCTTGTCTTATTCAGATGATAAACTACCTACACAGTCAGAACACATGATGCAAATGTTACCAGAAAACTCAGCTCTAGCCAATGAGAAAGAAACATGCCCTTTAAAGCTGGAAGATGCTAAAGTGGACTTGGAGGTGGATGAAGGCAGTACTGTATCAGGGCAAGCATGCAATACCAGAAAATCAGATGCTGAGCCACCGAGTAGAATGAGTTCTTTCTGCCAAAGTTGTGAAGATAAGGCTGAGAGCAGCTTATGGATACACAAGTACAAACCAACAAAAGCCTCAGAGGTATGCGGTAATGATGCATCCCTGAATTTCTTGCGTGACTGGTTACATCATTGGCATGAAAGACGTTATCAAAACAGAAAGGATTCCTCTAACAAGGATCAAACTGACATACCAGATGGTGATGGTGATTATAACTGTCCTGATTGTGACTATGCTTCAAAAGATGTTAGCGAGGAGGGTTCCCTGAAGAATGTTCTTTTAATTACAGGACCAGTTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAAGAACAAGGGTTTGAGGTTTTAGAGCTCAATACATCGGATTGTCGAAATGCGACTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACAATGTGTCAAAAGTTTAGTGGAACACACTGTGAGTTCACAGAAGAAAACTGTGAAATTGCTCCAAGCTCCAGCTTCGCCTAATGTTAAAGAAGCTAAAGAGATGGATCATGATGTGATTGAAATGATAACCCTATCCGATGATGGAGCTCATGGTCCTGGTGGAACGTCTCAGAAGTTGCACGCCATTGATAATACACTTACATTTGATGCTGTTCAAACTTTAATTTTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACACATTGCCGAAACAGCAAAAGGACCAATTATATTGACCAGCAACAGTAAAAAGGCTGGTCTGCCAAATAACTTTTGTAGACTACATGTTTCTTTCTCATTGCCATTTCCAGATGAGTTGCTTCGTCACTTGTTAACGGTTTGCGCCACAGAAGAAGTCAACGTCGAACCTCTTTTACTTGAGAAGTTTATCCAGTCTTGTGACAGAGATATTCGTAAAACCATTCTGCATCTTCAGTTCTGGTTCCAGAATAAAAAATATAGCAAAGACAAGAAAGTGCAGACATTATATGGCTCACTTCCTTTTGATCTTGAGGCTGGTCATAAGATACTACAAAAGATGATACCCTGGAGTTTCCCCTCAGAGTTATCCAAACTAATTGAGAACGAAGTCGCCAAGTCAATAGCTACAATGGAAAACCACTCAAGCTGGGAAGGGTTAGTTAAGGAAGAGCTTTGCATCAATGAGAAGGAAAATAACTTAGATGTTCAGTGTATGGGGACTGATTATTTAGAGTTCATGAAGACGATTAGATCTATTCCAGACCGTGGTGAGTTTGAAAGTCAATATAGTGCTATCTCTGAGTTATATAGTTGTTCTGGACCCTCGGTAACATCCTCTTGGCAAAAGGACCAAAGTAAATTTGTAGTGATGTCCACTGATGCTATGGATAAGGATCCAAATAATAGACATTCTGTAGACGTTCATGACGAATTTTACAAGAGACAGTCCCTTGAAGGCAACACTGATTCTTCCCTTAACTTTCTATTGAATCAAAGCTATGCCAGTACGTCTTTTGGTGAGCTACTGCATTCTGGTTTGGAAGATTCAGAGGTGGAACAGTATAAATATTTAGAAACAAATAATGATGCATGCTTAAACAACACACATAAATCACTTGATATGTCCTGGTTTCCAGAATCAAGATTTGTTTCCGAGACTGCAATTCAAAATAGAACAGAAACAGAGTCTACAGTTGTGTCTTCTGGTGGACACCTTGCTTGTCCGGTAGATGTTTCTCTGAGTAATGAGCTGAGACCATTCTCTTTCAGCGTTTGTCAGCGCTTGGCCAAAGTGCCTCAAGATCCAGATTTGGTGGTGACTACTGAAATTCCCAAATCTTCTCCAAGAGAAATAGCACCAGATTTTTGTGATGACAGCATGGAAATCGCAGCTGTGTATAACCCGATGGATGAGTGCAGTCACTCTGATTTTAAGTTAGAGTCAAAATTTGTTGACTCTAGTCCATCTATGGAGATCGATACAGTGCAAAATGTGTGGAGGAAACTTCGAACAGATTTGAAACAGCATGCCAGCTCAGAACAGACAGGTGCTATCGAAGTTGTTAAGCTTGCTAGTGGGCTAAGCAATTTAATTTCAGAAGCTGACTTGTTGTTTCGTAATCACCAACAAAAACAATGTGGTATTATGGAACCTCCAACTTCCCTGTCTGATGAAGAGACGTTTAGTTGGTATGATGAGCAAATGATGATGTCAACTGTTGCTGTACATGGTTTTTGCTTTTATGCCAAGCATATAGCAGAAGCGGGATCGAAATTGGGTTTTGAGGACAGGGTAGACATAACTTCAGAGATGTTGGCTTCTACTACAAATATTATGGCTTTTGGGAAGTTATCTAGACAGGACCACACCAAAACCATGAGTAGCTATAGTAAAGAGATTTTAGAGGTGAACGACCGAAGAAACAATAAGAGCATGCAATACAACGAAAGCAGAACATCTCTGTTCAACGTGATCCGATCCATTGTTCCTGCAAGATCATCAACAACGGCAATTAAAGATATTGCATTCAGTGAACTTCTTTCGTCACTGCGCCAAATTTCAATTTCAGAGGATTTCCGCATTTCACAAGGTGTTAAAAAGATGAGGAAAGGAAGGCGGAATGCTGAACATTATTTGAGCAGAGGTAAAATGGTGTTGTCTCCTGACGATATATCATTGTTGTGTGAAGGTGATTTGTACAGAAAGATATCTTCACAGTATGCTGCTAGCGTGGAAATCGACTGTACATGA

Protein sequence

>Msa0060510

MNNPTDVNSPNQKPVAEQQQQGSCTPENTFKKRKSPSKSTPRKKTSRNNTPKKNGSVNGVKGTGSPDVARKIDLRLEAKLSAEENSRMFAGRQMHPFFSLCKVEKKFKDSGDSESSLSAAKRESGRTNCGPIHVFEDITDDTSSLDWSDWTFLGNATIVDCSPESSKFSVMEGSVEPLNFDNFLSGVKSSSTSISQNALSYSDDKLPTQSEHMMQMLPENSALANEKETCPLKLEDAKVDLEVDEGSTVSGQACNTRKSDAEPPSRMSSFCQSCEDKAESSLWIHKYKPTKASEVCGNDASLNFLRDWLHHWHERRYQNRKDSSNKDQTDIPDGDGDYNCPDCDYASKDVSEEGSLKNVLLITGPVGSGKSAAVYACAQEQGFEVLELNTSDCRNATAVKQYFGDALGSQCVKSLVEHTVSSQKKTVKLLQAPASPNVKEAKEMDHDVIEMITLSDDGAHGPGGTSQKLHAIDNTLTFDAVQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNSKKAGLPNNFCRLHVSFSLPFPDELLRHLLTVCATEEVNVEPLLLEKFIQSCDRDIRKTILHLQFWFQNKKYSKDKKVQTLYGSLPFDLEAGHKILQKMIPWSFPSELSKLIENEVAKSIATMENHSSWEGLVKEELCINEKENNLDVQCMGTDYLEFMKTIRSIPDRGEFESQYSAISELYSCSGPSVTSSWQKDQSKFVVMSTDAMDKDPNNRHSVDVHDEFYKRQSLEGNTDSSLNFLLNQSYASTSFGELLHSGLEDSEVEQYKYLETNNDACLNNTHKSLDMSWFPESRFVSETAIQNRTETESTVVSSGGHLACPVDVSLSNELRPFSFSVCQRLAKVPQDPDLVVTTEIPKSSPREIAPDFCDDSMEIAAVYNPMDECSHSDFKLESKFVDSSPSMEIDTVQNVWRKLRTDLKQHASSEQTGAIEVVKLASGLSNLISEADLLFRNHQQKQCGIMEPPTSLSDEETFSWYDEQMMMSTVAVHGFCFYAKHIAEAGSKLGFEDRVDITSEMLASTTNIMAFGKLSRQDHTKTMSSYSKEILEVNDRRNNKSMQYNESRTSLFNVIRSIVPARSSTTAIKDIAFSELLSSLRQISISEDFRISQGVKKMRKGRRNAEHYLSRGKMVLSPDDISLLCEGDLYRKISSQYAASVEIDCT*