AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0579100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0579100 MtrunA17_Chr4g0043691 96.767 1423 43 1 1 1423 1 1420 0.0 2850
Msa0579100 MtrunA17_Chr2g0311141 51.299 154 73 1 1 154 97 248 4.91e-40 157
Msa0579100 MtrunA17_Chr3g0081541 40.000 140 81 1 4 143 226 362 1.46e-26 117
Msa0579100 MtrunA17_Chr3g0081571 38.650 163 96 2 19 181 312 470 1.55e-26 117
Msa0579100 MtrunA17_Chr3g0131611 43.262 141 77 1 15 155 12 149 7.45e-26 113
Msa0579100 MtrunA17_Chr7g0243491 38.272 162 93 3 14 172 30 187 1.10e-24 108
Msa0579100 MtrunA17_Chr8g0388501 37.692 130 75 2 19 144 181 308 8.25e-18 86.3
Msa0579100 MtrunA17_Chr1g0179041 56.410 78 32 1 77 154 129 204 2.65e-17 87.0
Msa0579100 MtrunA17_Chr3g0120061 37.984 129 74 2 19 143 190 316 2.91e-17 85.1
Msa0579100 MtrunA17_Chr7g0225451 39.695 131 70 3 19 145 169 294 5.04e-17 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0579100 AT2G35140.5 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0579100 AT2G35140.1 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0579100 AT2G35140.4 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0579100 AT2G35140.2 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0579100 AT2G35140.3 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0579100 AT2G35140.6 45.455 198 105 3 2 197 32 228 4.74e-42 168
Msa0579100 AT3G11000.1 43.056 144 76 2 19 159 13 153 6.42e-26 114
Msa0579100 AT3G11000.2 43.056 144 76 2 19 159 132 272 6.30e-25 112
Msa0579100 AT5G61910.3 43.448 145 74 4 19 160 67 206 8.74e-25 112
Msa0579100 AT5G61910.1 43.448 145 74 4 19 160 63 202 9.43e-25 112
Msa0579100 AT5G61910.2 43.448 145 74 4 19 160 63 202 9.43e-25 112
Msa0579100 AT5G61910.5 43.448 145 74 4 19 160 63 202 1.20e-24 112
Msa0579100 AT5G61910.4 43.448 145 74 4 19 160 63 202 6.09e-24 110
Msa0579100 AT5G01660.3 39.130 138 81 1 19 153 20 157 1.37e-23 107
Msa0579100 AT2G32910.1 42.748 131 72 1 13 143 315 442 2.13e-23 107
Msa0579100 AT5G01660.2 39.130 138 81 1 19 153 20 157 3.25e-23 107
Msa0579100 AT5G01660.1 39.130 138 81 1 19 153 20 157 3.25e-23 107
Msa0579100 AT3G27090.1 37.500 128 74 2 19 142 164 289 1.11e-15 80.1
Msa0579100 AT3G27090.2 37.500 128 74 2 19 142 164 289 1.11e-15 80.1
Msa0579100 AT3G27090.3 37.500 128 74 2 19 142 164 289 1.11e-15 80.1
Msa0579100 AT5G42050.1 37.209 129 75 2 19 143 218 344 1.12e-15 80.9

Find 298 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGCACTCTTGTTGAAATT+TGG 0.130590 4_1:-83759258 None:intergenic
AAAGATGGTTCTGAATATTT+AGG 0.161920 4_1:+83760776 Msa0579100:CDS
ACAACTTTGGTTGTTGTATT+AGG 0.178483 4_1:-83759114 None:intergenic
TGATAATCACAAATCATATT+TGG 0.190474 4_1:+83758246 Msa0579100:CDS
CTACCATACAATACAGAATT+TGG 0.190782 4_1:-83758064 None:intergenic
AAGTTTAACTTTGGGCTATC+TGG 0.226498 4_1:+83756865 Msa0579100:CDS
CCTATCCCTTCTTCTGATAT+TGG 0.229481 4_1:+83758184 Msa0579100:CDS
CTGATGTTCCTCTGGCAAAT+TGG 0.235548 4_1:+83758350 Msa0579100:CDS
AAAGAACTTTGCTCTAAATT+AGG 0.241063 4_1:-83757755 None:intergenic
CCTTGAGAACAACGATTATA+TGG 0.243470 4_1:+83757529 Msa0579100:CDS
CGTAATCATAAAGATGTTAT+TGG 0.250961 4_1:+83759348 Msa0579100:CDS
TTCAGGCAGCTACCATCTTT+TGG 0.253786 4_1:+83757899 Msa0579100:CDS
AGGAGCTGACGAAGACTTTA+AGG 0.258999 4_1:-83758164 None:intergenic
TGTTCAAAATGACAGAGTTT+TGG 0.265544 4_1:+83757211 Msa0579100:CDS
GCAATTGCTGACACCCTTCC+TGG 0.267730 4_1:+83760248 Msa0579100:CDS
TCAAATCAGTAGTTTGAAAA+AGG 0.292255 4_1:+83758846 Msa0579100:CDS
TGCAGTATCCAGAGAGAGTT+TGG 0.300252 4_1:-83757453 None:intergenic
GGCGAAGTTGGAAGATCTTT+TGG 0.300392 4_1:+83757098 Msa0579100:CDS
TCTGATGATGTTAGAGTTCA+TGG 0.301959 4_1:+83757599 Msa0579100:CDS
ATTGGATCATGGATACGATA+TGG 0.302068 4_1:+83758402 Msa0579100:CDS
TCTGATCCATCATTTAATTC+AGG 0.305246 4_1:-83759720 None:intergenic
TGGGTATGTTGGTGATTATT+TGG 0.306546 4_1:+83757478 Msa0579100:CDS
TCCTCTGACCACTATTTCTT+AGG 0.314959 4_1:-83757664 None:intergenic
TAATGTAAAATCAGCATCTT+TGG 0.316051 4_1:+83760631 Msa0579100:CDS
ATGCACTCTTGTTGAAATTT+GGG 0.317527 4_1:-83759257 None:intergenic
GCCCTTCCTACATTATTTGA+TGG 0.319243 4_1:+83759522 Msa0579100:CDS
AAGATGGTTCTGAATATTTA+GGG 0.319524 4_1:+83760777 Msa0579100:CDS
AGTATTAGTATAGAATCTTT+AGG 0.320535 4_1:+83756336 Msa0579100:five_prime_UTR
TGTTTCAAGAAGGGATTGTT+TGG 0.323448 4_1:+83756464 Msa0579100:CDS
GGCGAAGCTGGAAGATCTTT+TGG 0.326727 4_1:+83757167 Msa0579100:CDS
CCTACTGAGTACGGCTCTAA+TGG 0.328108 4_1:-83757146 None:intergenic
GAGAAGGAGCCACAATCTTT+TGG 0.329390 4_1:-83760743 None:intergenic
TAATTTAGAGCAAAGTTCTT+TGG 0.331218 4_1:+83757757 Msa0579100:CDS
AGAACCATCTTTAGCTTCAA+TGG 0.336234 4_1:-83760765 None:intergenic
TTGCACAGGAAGTGCTTAAA+TGG 0.342320 4_1:-83757823 None:intergenic
TTCAGTATTGTTGCGCTGAT+TGG 0.359013 4_1:-83758638 None:intergenic
CTGTATTGTATGGTAGCAAC+AGG 0.363364 4_1:+83758071 Msa0579100:CDS
AGGTTAAGTTCACTGAGATT+TGG 0.363461 4_1:+83756776 Msa0579100:intron
GGTCAAACGTGAAGAACATT+TGG 0.367396 4_1:+83756255 Msa0579100:intron
CTTCTTCTTCTTCATACTAC+AGG 0.368933 4_1:-83759025 None:intergenic
GATCCAATGAATCATCATAT+TGG 0.372445 4_1:-83758387 None:intergenic
TTCCTTCCGCAGTTGGTTGA+TGG 0.373418 4_1:-83757962 None:intergenic
GCAGCTAACAAGTTTAACTT+TGG 0.375668 4_1:+83756856 Msa0579100:CDS
CGACCCCACTTGGTGGGATA+AGG 0.380330 4_1:-83760583 None:intergenic
GGGTTCGGTGGCAGCGCAAT+AGG 0.380991 4_1:-83755688 None:intergenic
TGATGTTCCTCTGGCAAATT+GGG 0.381340 4_1:+83758351 Msa0579100:CDS
ATGCTCCTGGCTTAAACTTC+AGG 0.382193 4_1:+83757882 Msa0579100:CDS
AATGCACAGAAGGAGGAATA+TGG 0.384066 4_1:+83758535 Msa0579100:CDS
CAGTACTCAGTTGGCGAAGT+TGG 0.385105 4_1:+83757086 Msa0579100:CDS
CTCTCTCTGGATACTGCAAA+TGG 0.388691 4_1:+83757458 Msa0579100:CDS
AGGCTTTGCCCTCAACTACT+TGG 0.390319 4_1:+83760315 Msa0579100:CDS
GTCAAACGTGAAGAACATTT+GGG 0.391681 4_1:+83756256 Msa0579100:five_prime_UTR
ACTGTTCATGCATTAATTGA+TGG 0.392786 4_1:+83760068 Msa0579100:CDS
CCGTACTCAGTAGGCGAAGC+TGG 0.393054 4_1:+83757155 Msa0579100:CDS
CCTTCCTTGCCGACCCCACT+TGG 0.400566 4_1:-83760593 None:intergenic
TAATGTAGAAGCAGCATCTC+TGG 0.405710 4_1:+83759644 Msa0579100:CDS
AAATACAGATGGCACAATAT+TGG 0.408910 4_1:+83758031 Msa0579100:CDS
AGTCCAATATGATGATTCAT+TGG 0.408949 4_1:+83758384 Msa0579100:CDS
TAGTTGAGGGCAAAGCCTTT+TGG 0.409070 4_1:-83760310 None:intergenic
AAGCTGAAGACAAAACCTTT+TGG 0.411294 4_1:-83760118 None:intergenic
CATAAAGATGTTATTGGAAG+TGG 0.412051 4_1:+83759354 Msa0579100:CDS
ATCAATTAGTGATAGGTTGA+TGG 0.412834 4_1:+83757634 Msa0579100:CDS
AGAGAAGATTATGCCCGATA+TGG 0.413671 4_1:+83756514 Msa0579100:CDS
TTTCCAAATTCTGTATTGTA+TGG 0.415903 4_1:+83758061 Msa0579100:CDS
CATCACCCGTGAACCTTCCT+TGG 0.417989 4_1:-83760357 None:intergenic
AAGCTGAGAACAAAACCTTT+TGG 0.418098 4_1:-83759956 None:intergenic
ATCTTCAGTGGAGGAGAGAA+AGG 0.419463 4_1:+83759489 Msa0579100:CDS
CTATGCTGCCAAACTCTCTC+TGG 0.420000 4_1:+83757445 Msa0579100:CDS
TTATCAAACAGTGAAGAAAA+TGG 0.422408 4_1:-83758229 None:intergenic
CAGCTAACAAGTTTAACTTT+GGG 0.424155 4_1:+83756857 Msa0579100:CDS
GAAGACAAAGACATTAATCT+TGG 0.425242 4_1:+83759285 Msa0579100:CDS
AAGCTGAGAACAAAACCTTT+TGG 0.426140 4_1:-83759572 None:intergenic
TATGAGAAGAAACTACTTCA+TGG 0.426279 4_1:+83756554 Msa0579100:CDS
TCTTCTGATATTGGAAATAG+TGG 0.427106 4_1:+83758193 Msa0579100:CDS
AAGCAGATTCTGACGCCAAC+TGG 0.428407 4_1:-83758114 None:intergenic
AAGCTGAGGACAAAACCTTT+TGG 0.428688 4_1:-83760502 None:intergenic
CAAAGAAGGTCTTCTGAGCT+TGG 0.428981 4_1:+83757329 Msa0579100:CDS
TTCATCCTTGTTGTGTTCCA+AGG 0.432140 4_1:-83758722 None:intergenic
ATCATTGACCCTCATTGTTA+CGG 0.436015 4_1:-83756363 None:intergenic
ATCTGCCTGTCTTCTACAAC+AGG 0.437441 4_1:+83757732 Msa0579100:CDS
ATAAAGATTGCACCGAAAAC+CGG 0.438890 4_1:-83756416 None:intergenic
TCCTTGCCGACCCCACTTGG+TGG 0.439527 4_1:-83760590 None:intergenic
TTAGGTTTGGTGAGCGGGAA+GGG 0.440675 4_1:-83755727 None:intergenic
CACCATACATGAACCTTCCT+TGG 0.444248 4_1:-83760165 None:intergenic
GTTTCAAGAAGGGATTGTTT+GGG 0.450309 4_1:+83756465 Msa0579100:CDS
CTTTGGGCTATCTGGAGATC+AGG 0.450553 4_1:+83756873 Msa0579100:CDS
CCCTTCCTACATTATTTGAT+GGG 0.452385 4_1:+83759523 Msa0579100:CDS
CAATGCTCGCGGAAAAGATC+CGG 0.452682 4_1:+83756397 Msa0579100:CDS
AGAGTGAGAATTTGTTGGTT+GGG 0.456658 4_1:+83759208 Msa0579100:CDS
AGATCTCTTTGAAAATGCCT+TGG 0.457007 4_1:+83758789 Msa0579100:CDS
CCATATAATCGTTGTTCTCA+AGG 0.457580 4_1:-83757529 None:intergenic
CACTTCATCAACTGAAGTAA+TGG 0.457780 4_1:-83758560 None:intergenic
CCAAGTGGGGTCGGCAAGGA+AGG 0.457919 4_1:+83760593 Msa0579100:CDS
ATTAAGTTCTGATGTTCCTC+TGG 0.459264 4_1:+83758342 Msa0579100:CDS
TTTGGTGAGCGGGAAGGGAA+AGG 0.460212 4_1:-83755722 None:intergenic
CGTTGAATTCCTTCCGCAGT+TGG 0.461142 4_1:-83757969 None:intergenic
GCAGGTCATCAATTAGTGAT+AGG 0.462592 4_1:+83757627 Msa0579100:CDS
AAGGAGAGAAGAGACGGGTT+CGG 0.462993 4_1:-83755703 None:intergenic
ATCTCTCTTCTTCCTCTGAC+TGG 0.463076 4_1:-83758770 None:intergenic
TGCCATTAAAAGATGAAAGC+AGG 0.463559 4_1:+83757387 Msa0579100:CDS
ACGCTTGAAATCAACAACTT+TGG 0.464373 4_1:-83759127 None:intergenic
ATTATATGGGCACACATCTC+AGG 0.465272 4_1:+83757543 Msa0579100:CDS
CCACTTGGTGGGATAAGGCT+TGG 0.465617 4_1:-83760578 None:intergenic
CCTAGCAAAGTGAATGCCTT+AGG 0.466361 4_1:-83756617 None:intergenic
AGTTAGAACCGGAGGTTCCT+AGG 0.468383 4_1:+83757027 Msa0579100:CDS
TGCACGTGATGTTAACAAAC+GGG 0.472052 4_1:+83758501 Msa0579100:CDS
CCTAAGGCATTCACTTTGCT+AGG 0.473973 4_1:+83756617 Msa0579100:CDS
GATGAAAGTTTGAGGAAGAA+AGG 0.475284 4_1:+83758910 Msa0579100:CDS
GATTCTCAAAATAGCAATCA+TGG 0.475985 4_1:+83758436 Msa0579100:CDS
TTCAGCTCCTTGTGTTGCAC+AGG 0.476509 4_1:-83757837 None:intergenic
TGCCTTGGATGATCTAAATA+CGG 0.478343 4_1:+83759065 Msa0579100:CDS
CTGTATGATTCAGATGCTCC+TGG 0.479009 4_1:+83757869 Msa0579100:CDS
ATGTGACAAGAAGTTTCAAC+TGG 0.480632 4_1:-83760821 None:intergenic
ACCTTTCCTGCATTAAATGA+TGG 0.482099 4_1:+83759906 Msa0579100:CDS
TTCCGCGAGCATTGTTGTTG+TGG 0.482131 4_1:-83756388 None:intergenic
TTCTCCATTGAAGCTAAAGA+TGG 0.482525 4_1:+83760761 Msa0579100:CDS
CAAGGAAGGTTCATGTATGA+TGG 0.485913 4_1:+83759620 Msa0579100:CDS
AGATTGCTCTGAAAATGCCT+TGG 0.485948 4_1:+83758876 Msa0579100:CDS
TTGGATCATGGATACGATAT+GGG 0.486675 4_1:+83758403 Msa0579100:CDS
AAAAGTAGCATCTCTGAAGA+TGG 0.486918 4_1:+83760004 Msa0579100:CDS
GGCATAATCTTCTCTACGAA+TGG 0.488960 4_1:-83756506 None:intergenic
ACAACAAGGATGAAAGCTTA+AGG 0.490749 4_1:+83758731 Msa0579100:CDS
TCATGCATTAATTGATGGAC+CGG 0.493185 4_1:+83760073 Msa0579100:CDS
TGGCAAGAAAAGATGACAGC+AGG 0.494172 4_1:+83757498 Msa0579100:CDS
CAAGGAAGGTTCATGTATGA+TGG 0.494249 4_1:+83760607 Msa0579100:CDS
TCAGTATTGTTGCGCTGATT+GGG 0.495031 4_1:-83758637 None:intergenic
CTCTTCATTCCAAGTAGTTG+AGG 0.496425 4_1:-83760324 None:intergenic
TTCATCCTCGTTGTGTTCCA+AGG 0.497384 4_1:-83758806 None:intergenic
CGACATGAACAAGTTAGAAC+CGG 0.497451 4_1:+83757016 Msa0579100:CDS
ACGGATTCCACAACTGTGAC+TGG 0.498542 4_1:+83759084 Msa0579100:CDS
TCTTCATTCCAAGTAGTTGA+GGG 0.499901 4_1:-83760323 None:intergenic
TATGATGATTCATTGGATCA+TGG 0.500586 4_1:+83758391 Msa0579100:CDS
AACGAAGAAAAGAGATTGCT+CGG 0.502419 4_1:+83758951 Msa0579100:CDS
AGTTGATGAAGTGATGGAAA+TGG 0.502770 4_1:+83758570 Msa0579100:CDS
TTTAGGTTTGGTGAGCGGGA+AGG 0.503324 4_1:-83755728 None:intergenic
GACAAAGACATTAATCTTGG+CGG 0.503998 4_1:+83759288 Msa0579100:CDS
AAGAGTGAGAATTTGTTGGT+TGG 0.504667 4_1:+83759207 Msa0579100:CDS
GCAACAATACTGAAAGTTTG+AGG 0.507451 4_1:+83758647 Msa0579100:CDS
ATGCACGTGATGTTAACAAA+CGG 0.508050 4_1:+83758500 Msa0579100:CDS
CCATTATTAATTCCAAAAGA+TGG 0.508188 4_1:-83757911 None:intergenic
GATTGCTCTGAAAATGCCTT+GGG 0.508618 4_1:+83758877 Msa0579100:CDS
TGATTGCTTTGAAAATGCCT+TGG 0.508748 4_1:+83758705 Msa0579100:CDS
AGATTGCTTTGAAAATGCCT+TGG 0.509112 4_1:+83759050 Msa0579100:CDS
CGGATATTCTTGCAATGCCA+TGG 0.509137 4_1:-83758284 None:intergenic
ATCTTTAGCTTCAATGGAGA+AGG 0.510043 4_1:-83760759 None:intergenic
AGGAAGTGCTTAAATGGAAT+GGG 0.510847 4_1:-83757817 None:intergenic
GCATAATCTTCTCTACGAAT+GGG 0.510972 4_1:-83756505 None:intergenic
ACCCTTCCTGGATTAAATGA+TGG 0.511966 4_1:+83760260 Msa0579100:CDS
CAAGGAAGGTTCACGGGTGA+TGG 0.513168 4_1:+83760358 Msa0579100:CDS
AAGGGAAAGGAGAGAAGAGA+CGG 0.513199 4_1:-83755709 None:intergenic
GCTCTAGACATACGTCTCCT+AGG 0.515932 4_1:-83757044 None:intergenic
CTCCATCAACCAACTGCGGA+AGG 0.516261 4_1:+83757960 Msa0579100:CDS
CTTGAGAACAACGATTATAT+GGG 0.516396 4_1:+83757530 Msa0579100:CDS
TGGGTTCTTCTCACCTGAGC+AGG 0.517780 4_1:-83756650 None:intergenic
GACAAAATGCCAAAAGATTG+TGG 0.520977 4_1:+83760734 Msa0579100:CDS
TGAAGAGAGTTCTTGTACCA+AGG 0.523096 4_1:+83760148 Msa0579100:CDS
TGAAGAGAGTTCTCATACCA+AGG 0.523096 4_1:+83760340 Msa0579100:CDS
AGGGATACAATATCCTGCTC+AGG 0.524284 4_1:+83756637 Msa0579100:CDS
TGAAACTTCTTGTCACATTG+AGG 0.525546 4_1:+83760826 Msa0579100:CDS
GTCAGAATCTGCTTTATATG+AGG 0.527755 4_1:+83758123 Msa0579100:CDS
CTCATACCAAGGAAGGTTCA+CGG 0.528782 4_1:+83760351 Msa0579100:CDS
AAACAGAAACAATGCACAGA+AGG 0.529404 4_1:+83758525 Msa0579100:CDS
CAGGAAGTGCTTAAATGGAA+TGG 0.530324 4_1:-83757818 None:intergenic
GAGAAGAGAATGTTTCAAGA+AGG 0.530490 4_1:+83756454 Msa0579100:CDS
TGAAGAGAGTTCTCATACCG+AGG 0.530516 4_1:+83759794 Msa0579100:CDS
TCTGGTCCATCATTTAATCC+AGG 0.532393 4_1:-83760266 None:intergenic
AGAAGAGAATGTTTCAAGAA+GGG 0.533139 4_1:+83756455 Msa0579100:CDS
ATCCATCATTTAATTCAGGA+AGG 0.533991 4_1:-83759716 None:intergenic
GGTCATGGAATGCTTGATGA+AGG 0.534269 4_1:+83757119 Msa0579100:CDS
TACTTCAGTTGATGAAGTGA+TGG 0.534655 4_1:+83758564 Msa0579100:CDS
CTATTTCCAATATCAGAAGA+AGG 0.535862 4_1:-83758190 None:intergenic
TACCGAGGGAAGTTCATGTA+TGG 0.537020 4_1:+83759809 Msa0579100:CDS
TACCAAGGAAGGTTCATGTA+TGG 0.538200 4_1:+83760163 Msa0579100:CDS
TCTGATCCATCATTTAATGC+AGG 0.538711 4_1:-83759912 None:intergenic
TCTGAATATTTAGGGAATGC+CGG 0.540667 4_1:+83760785 Msa0579100:CDS
CGGAAGGAATTCAACGAGTA+GGG 0.541736 4_1:+83757976 Msa0579100:CDS
GCCACAGAATTTATCTTCAG+TGG 0.542025 4_1:+83759477 Msa0579100:CDS
ATACGTCTCCTAGGAACCTC+CGG 0.542564 4_1:-83757035 None:intergenic
TATCATACATGAACCATCCT+TGG 0.542898 4_1:-83760549 None:intergenic
ACTCTTCATGCACTAAATGA+TGG 0.544048 4_1:+83760452 Msa0579100:CDS
TTCATCCTCATTGTGTCCCA+AGG 0.544133 4_1:-83758893 None:intergenic
GAGAGTTCTTGTACCAAGGA+AGG 0.545936 4_1:+83760152 Msa0579100:CDS
AGAACATTTGGGGTATATGA+TGG 0.546372 4_1:+83756267 Msa0579100:five_prime_UTR
CTGATATTGGAAATAGTGGC+AGG 0.546936 4_1:+83758197 Msa0579100:CDS
TCTCTCTGGATACTGCAAAT+GGG 0.547137 4_1:+83757459 Msa0579100:CDS
AGCTGCCTGAAGTTTAAGCC+AGG 0.549207 4_1:-83757887 None:intergenic
ATCGTGCAGAATATTCTCCT+TGG 0.549495 4_1:-83757268 None:intergenic
CCAGCTTCGCCTACTGAGTA+CGG 0.550685 4_1:-83757155 None:intergenic
GGACTATAATGTTCATCCCA+TGG 0.550701 4_1:+83758267 Msa0579100:CDS
TTAGAGTTCATGGTGATGGC+AGG 0.551415 4_1:+83757609 Msa0579100:CDS
CCATTAGAGCCGTACTCAGT+AGG 0.551970 4_1:+83757146 Msa0579100:CDS
TTAGGCCTGTTGTAGAAGAC+AGG 0.552979 4_1:-83757737 None:intergenic
CCTTGCCGACCCCACTTGGT+GGG 0.554212 4_1:-83760589 None:intergenic
GGTGAAGACCTAAGAAATAG+TGG 0.554305 4_1:+83757656 Msa0579100:CDS
TCAATTAGTGATAGGTTGAT+GGG 0.554469 4_1:+83757635 Msa0579100:CDS
GCGGAAGGAATTCAACGAGT+AGG 0.555263 4_1:+83757975 Msa0579100:CDS
GTCTTCATTGCAAGAAGCTG+AGG 0.555881 4_1:-83760516 None:intergenic
AGGTAGCAATATCGATCCTA+AGG 0.556717 4_1:+83756601 Msa0579100:CDS
CGAATGGGATATAAGAAGAC+GGG 0.557641 4_1:-83756490 None:intergenic
GAAGACAGGCAGATCGACAT+TGG 0.557940 4_1:-83757723 None:intergenic
ACAATGAGGATGAAAGTTTG+AGG 0.558520 4_1:+83758902 Msa0579100:CDS
GCGTATCCACCTACACTGTA+TGG 0.559286 4_1:-83757566 None:intergenic
AAGGTCTTCTGAGCTTGGAG+TGG 0.559335 4_1:+83757334 Msa0579100:CDS
CATATAATCGTTGTTCTCAA+GGG 0.559394 4_1:-83757528 None:intergenic
ACAACGAGGATGAAAGTTTG+AGG 0.560145 4_1:+83758815 Msa0579100:CDS
TCTTCAGTGGAGGAGAGAAA+GGG 0.562156 4_1:+83759490 Msa0579100:CDS
GAGAGAAGAGACGGGTTCGG+TGG 0.562698 4_1:-83755700 None:intergenic
TCTGACCCATCAAATAATGT+AGG 0.563664 4_1:-83759528 None:intergenic
TTGTTGCGCTGATTGGGTGT+TGG 0.565018 4_1:-83758631 None:intergenic
ACCCTTCCTGAATTAAATGA+TGG 0.565083 4_1:+83759714 Msa0579100:CDS
ACCCATCAAATAATGTAGGA+AGG 0.567596 4_1:-83759524 None:intergenic
GTCCATCATTTAATCCAGGA+AGG 0.568632 4_1:-83760262 None:intergenic
CTCTTCATTGCAAGAAGCCG+AGG 0.572492 4_1:-83759778 None:intergenic
CCCACCAAGTGGGGTCGGCA+AGG 0.572781 4_1:+83760589 Msa0579100:CDS
TGGTAATTATGCATCAAGAC+AGG 0.572791 4_1:-83757248 None:intergenic
ACAACGAGGATGAAAGTTTG+AGG 0.573671 4_1:+83758989 Msa0579100:CDS
GATTATACAAGTGGATATGT+TGG 0.573929 4_1:+83757356 Msa0579100:CDS
CACCATACATGAACTTCCCT+CGG 0.574114 4_1:-83759811 None:intergenic
CTAAGGCATTCACTTTGCTA+GGG 0.575167 4_1:+83756618 Msa0579100:CDS
GAGAGTTCTCATACCAAGGA+AGG 0.576498 4_1:+83760344 Msa0579100:CDS
GAATATTCTGCACGATACAA+TGG 0.576914 4_1:+83757275 Msa0579100:CDS
GACAGCTCTCATACCAAGGA+TGG 0.577808 4_1:+83760536 Msa0579100:CDS
ACATTGGAATCACGTAAACT+AGG 0.581051 4_1:-83757707 None:intergenic
CAAGGAAGGTTCATGTATGG+TGG 0.581118 4_1:+83760166 Msa0579100:CDS
TCATACCAAGGAAGGTTCAC+GGG 0.582696 4_1:+83760352 Msa0579100:CDS
CCAATATCAGAAGAAGGGAT+AGG 0.583349 4_1:-83758184 None:intergenic
ACATCAGAGCAGTACTCAGT+TGG 0.584878 4_1:+83757077 Msa0579100:CDS
AGATTGCTCGGAGAATGTCT+TGG 0.585472 4_1:+83758963 Msa0579100:CDS
TGATTTCAAGCGTCGAAGCA+AGG 0.586627 4_1:+83759137 Msa0579100:CDS
CGAGGGAAGTTCATGTATGG+TGG 0.587426 4_1:+83759812 Msa0579100:CDS
ATCCGTATTTAGATCATCCA+AGG 0.588020 4_1:-83759067 None:intergenic
CTTGGAGTGGATTATACAAG+TGG 0.588668 4_1:+83757347 Msa0579100:CDS
CACCTATGGAAGAGAGGAGG+AGG 0.588736 4_1:-83755752 None:intergenic
AAATGCCTTGGAACACAACA+AGG 0.589651 4_1:+83758717 Msa0579100:CDS
CTCAGGCCATACAGTGTAGG+TGG 0.589803 4_1:+83757560 Msa0579100:CDS
CTTATCCCACCAAGTGGGGT+CGG 0.590183 4_1:+83760584 Msa0579100:CDS
CAGAAACAATGCACAGAAGG+AGG 0.590268 4_1:+83758528 Msa0579100:CDS
CCCATCAAATAATGTAGGAA+GGG 0.590369 4_1:-83759523 None:intergenic
CATACAAAACTCTGGCCAGT+TGG 0.590866 4_1:+83758099 Msa0579100:CDS
TCCATCATTTAATGCAGGAA+AGG 0.592991 4_1:-83759907 None:intergenic
TAGGTTTACCGTAACAATGA+GGG 0.593041 4_1:+83756355 Msa0579100:exon
AGCACTTCCTGTGCAACACA+AGG 0.594010 4_1:+83757830 Msa0579100:CDS
GGATATTCTTGCAATGCCAT+GGG 0.597707 4_1:-83758283 None:intergenic
GATACTGCAAATGGGTATGT+TGG 0.597881 4_1:+83757467 Msa0579100:CDS
TATTTCCAATATCAGAAGAA+GGG 0.599016 4_1:-83758189 None:intergenic
AGGGAATGCATACAAAACTC+TGG 0.600459 4_1:+83758091 Msa0579100:CDS
TGAAGACAGCTCTCATACCA+AGG 0.600471 4_1:+83760532 Msa0579100:CDS
AACCTCCTCCTCTCTTCCAT+AGG 0.600733 4_1:+83755750 Msa0579100:five_prime_UTR
AACATCATCAGAAGGAATGT+CGG 0.601317 4_1:-83757588 None:intergenic
AGTTCTGTATGCACGAGTTG+TGG 0.602337 4_1:-83758001 None:intergenic
ATTTGATGGGTCAGAATGTG+CGG 0.603587 4_1:+83759536 Msa0579100:CDS
AAAAGCAGTATCTCTGAAGA+CGG 0.605385 4_1:+83759842 Msa0579100:CDS
TTAGGTTTACCGTAACAATG+AGG 0.607994 4_1:+83756354 Msa0579100:exon
TCCATCATTTAATTCAGGAA+GGG 0.608308 4_1:-83759715 None:intergenic
ATTGCCTCCAGTCACAGTTG+TGG 0.609147 4_1:-83759091 None:intergenic
TTACGACTTGCATTTAGCAA+TGG 0.609473 4_1:-83759330 None:intergenic
AGGGAAAGGAGAGAAGAGAC+GGG 0.609610 4_1:-83755708 None:intergenic
ACGAATGGGATATAAGAAGA+CGG 0.613207 4_1:-83756491 None:intergenic
TATTGGAAGTGGATGTACAT+TGG 0.613937 4_1:+83759365 Msa0579100:CDS
CAAGCCTTATCCCACCAAGT+GGG 0.615163 4_1:+83760579 Msa0579100:CDS
AAGTGATGGAAATGGTTCGT+CGG 0.619342 4_1:+83758578 Msa0579100:CDS
AGAAGCAGCATCTCTGGAGA+AGG 0.620850 4_1:+83759650 Msa0579100:CDS
TTCGTCGGAGTCAAAGCCAC+CGG 0.622611 4_1:+83758593 Msa0579100:CDS
ACAGAATTTATCTTCAGTGG+AGG 0.623986 4_1:+83759480 Msa0579100:CDS
ACCTAAGAAATAGTGGTCAG+AGG 0.626596 4_1:+83757663 Msa0579100:CDS
AACTCAAAGACAAATACAGA+TGG 0.626859 4_1:+83758020 Msa0579100:CDS
AAACTCAAGTCACCAGTCAG+AGG 0.627950 4_1:+83758758 Msa0579100:CDS
TTCAAGGCTACTTCTAAGGG+AGG 0.630188 4_1:+83756581 Msa0579100:CDS
GAAGAGAGTTCTCATACCGA+GGG 0.630928 4_1:+83759795 Msa0579100:CDS
GGATACGATATGGGATGTCA+TGG 0.631953 4_1:+83758412 Msa0579100:CDS
AACCACAACAACAATGCTCG+CGG 0.637953 4_1:+83756386 Msa0579100:CDS
GCTAGTGTTATATCATGACT+CGG 0.641441 4_1:-83758304 None:intergenic
ATAACACTAGCAATGAACAA+TGG 0.642971 4_1:+83758316 Msa0579100:CDS
TCCACTGAAGATAAATTCTG+TGG 0.643618 4_1:-83759478 None:intergenic
TCCATCATTTAATCCAGGAA+GGG 0.647205 4_1:-83760261 None:intergenic
AAATTATCCCAATTTGCCAG+AGG 0.648990 4_1:-83758358 None:intergenic
AAGCCTTATCCCACCAAGTG+GGG 0.649098 4_1:+83760580 Msa0579100:CDS
TGAACTCTAACATCATCAGA+AGG 0.649743 4_1:-83757596 None:intergenic
AAATGCCTTGGGACACAATG+AGG 0.654400 4_1:+83758888 Msa0579100:CDS
TACACGCACCTATGGAAGAG+AGG 0.655936 4_1:-83755758 None:intergenic
GATGTTAGAGTTCATGGTGA+TGG 0.658181 4_1:+83757605 Msa0579100:CDS
AAATGATGGATCAGAATGTG+CGG 0.658186 4_1:+83759728 Msa0579100:CDS
CATCTCAGGCCATACAGTGT+AGG 0.659620 4_1:+83757557 Msa0579100:CDS
CCAAGCCTTATCCCACCAAG+TGG 0.661248 4_1:+83760578 Msa0579100:CDS
GTCTTGATGCATAATTACCA+AGG 0.664929 4_1:+83757251 Msa0579100:CDS
CATGAACAAGTTAGAACCGG+AGG 0.666115 4_1:+83757019 Msa0579100:CDS
AAATGATGGATCAGAATGTG+CGG 0.667244 4_1:+83759920 Msa0579100:CDS
AAATGATGGATCAGAATGTG+CGG 0.667244 4_1:+83760466 Msa0579100:CDS
TCAAGCGTCGAAGCAAGGTG+AGG 0.674009 4_1:+83759142 Msa0579100:CDS
AAATGATGGACCAGAATGTG+TGG 0.675680 4_1:+83760274 Msa0579100:CDS
CTTTCTCCATCAACCAACTG+CGG 0.679533 4_1:+83757956 Msa0579100:CDS
AAATGCCTTGGAACACAACG+AGG 0.681465 4_1:+83758801 Msa0579100:CDS
AATTGATGGACCGGAATGTG+TGG 0.682298 4_1:+83760082 Msa0579100:CDS
GAATGTCTTGGAACACAACG+AGG 0.690050 4_1:+83758975 Msa0579100:CDS
GATTCCACAACTGTGACTGG+AGG 0.694621 4_1:+83759087 Msa0579100:CDS
ACGCACCTATGGAAGAGAGG+AGG 0.698688 4_1:-83755755 None:intergenic
TGTATTGTATGGTAGCAACA+GGG 0.699914 4_1:+83758072 Msa0579100:CDS
TCAAACGTGAAGAACATTTG+GGG 0.710804 4_1:+83756257 Msa0579100:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAGGATTAATAATA+AGG - chr4_1:83755844-83755863 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTGTAAC+CGG + chr4_1:83756012-83756031 Msa0579100:intron 10.0%
!!! TTGATTAATTACTGATTAAT+AGG + chr4_1:83756234-83756253 Msa0579100:intron 15.0%
!! TAATAATAAGGAAAAGAATG+CGG - chr4_1:83755832-83755851 None:intergenic 20.0%
!! AGTATTAGTATAGAATCTTT+AGG + chr4_1:83756336-83756355 Msa0579100:five_prime_UTR 20.0%
!! AAATAAAAACAAAGCCATAT+CGG - chr4_1:83756531-83756550 None:intergenic 20.0%
!! AATTATAGAATGAAGTAACT+GGG - chr4_1:83756672-83756691 None:intergenic 20.0%
!! AAATTATAGAATGAAGTAAC+TGG - chr4_1:83756673-83756692 None:intergenic 20.0%
!!! AAATGTGAAAGATTTTCAAA+AGG + chr4_1:83756926-83756945 Msa0579100:intron 20.0%
!! TGATAATCACAAATCATATT+TGG + chr4_1:83758246-83758265 Msa0579100:CDS 20.0%
!!! AACACACTACTTTTTTTATT+TGG - chr4_1:83758466-83758485 None:intergenic 20.0%
!! CATAATCGAAATCGTATTTT+AGG + chr4_1:83756088-83756107 Msa0579100:intron 25.0%
! AATAAAAACAAAGCCATATC+GGG - chr4_1:83756530-83756549 None:intergenic 25.0%
! TCAGCTAAAGTAAACAAAAA+TGG - chr4_1:83756736-83756755 None:intergenic 25.0%
!! TTTTAGTAAGCAAACAAAGA+AGG + chr4_1:83757315-83757334 Msa0579100:CDS 25.0%
!! AAAGAACTTTGCTCTAAATT+AGG - chr4_1:83757758-83757777 None:intergenic 25.0%
!! TAATTTAGAGCAAAGTTCTT+TGG + chr4_1:83757757-83757776 Msa0579100:CDS 25.0%
! CCATTATTAATTCCAAAAGA+TGG - chr4_1:83757914-83757933 None:intergenic 25.0%
!!! CCATCTTTTGGAATTAATAA+TGG + chr4_1:83757911-83757930 Msa0579100:CDS 25.0%
! TTTCCAAATTCTGTATTGTA+TGG + chr4_1:83758061-83758080 Msa0579100:CDS 25.0%
! TATTTCCAATATCAGAAGAA+GGG - chr4_1:83758192-83758211 None:intergenic 25.0%
! TTATCAAACAGTGAAGAAAA+TGG - chr4_1:83758232-83758251 None:intergenic 25.0%
!!! CACTACTTTTTTTATTTGGA+TGG - chr4_1:83758462-83758481 None:intergenic 25.0%
! TCAAATCAGTAGTTTGAAAA+AGG + chr4_1:83758846-83758865 Msa0579100:CDS 25.0%
! TAAAAAGAGTGAGAATTTGT+TGG + chr4_1:83759203-83759222 Msa0579100:CDS 25.0%
! CGTAATCATAAAGATGTTAT+TGG + chr4_1:83759348-83759367 Msa0579100:CDS 25.0%
!! TTTTAACATCATAATCACAC+TGG - chr4_1:83759395-83759414 None:intergenic 25.0%
! GGATAATAAAAATCACCAAA+AGG + chr4_1:83759557-83759576 Msa0579100:CDS 25.0%
! TAATGTAAAATCAGCATCTT+TGG + chr4_1:83760631-83760650 Msa0579100:CDS 25.0%
!!! AAAGATGGTTCTGAATATTT+AGG + chr4_1:83760776-83760795 Msa0579100:CDS 25.0%
!!! AAGATGGTTCTGAATATTTA+GGG + chr4_1:83760777-83760796 Msa0579100:CDS 25.0%
AAAGTGTAAAGCAGCATAAT+CGG - chr4_1:83755910-83755929 None:intergenic 30.0%
ACTGTAAATATTCAAAACGC+CGG - chr4_1:83756034-83756053 None:intergenic 30.0%
! AGGTCAAATTTGTTTCAACT+AGG + chr4_1:83756108-83756127 Msa0579100:intron 30.0%
AGAAGAGAATGTTTCAAGAA+GGG + chr4_1:83756455-83756474 Msa0579100:CDS 30.0%
TATGAGAAGAAACTACTTCA+TGG + chr4_1:83756554-83756573 Msa0579100:CDS 30.0%
!! TCGAAATATCTTTTCAGGAA+GGG - chr4_1:83756812-83756831 None:intergenic 30.0%
! CAGCTAACAAGTTTAACTTT+GGG + chr4_1:83756857-83756876 Msa0579100:CDS 30.0%
! ATTTTTGAACTGTTCTTTGC+AGG + chr4_1:83756971-83756990 Msa0579100:intron 30.0%
! TGTTCAAAATGACAGAGTTT+TGG + chr4_1:83757211-83757230 Msa0579100:CDS 30.0%
! GTTCAAAATGACAGAGTTTT+GGG + chr4_1:83757212-83757231 Msa0579100:CDS 30.0%
GATTATACAAGTGGATATGT+TGG + chr4_1:83757356-83757375 Msa0579100:CDS 30.0%
CATATAATCGTTGTTCTCAA+GGG - chr4_1:83757531-83757550 None:intergenic 30.0%
CTTGAGAACAACGATTATAT+GGG + chr4_1:83757530-83757549 Msa0579100:CDS 30.0%
! ATCAATTAGTGATAGGTTGA+TGG + chr4_1:83757634-83757653 Msa0579100:CDS 30.0%
!! TCAATTAGTGATAGGTTGAT+GGG + chr4_1:83757635-83757654 Msa0579100:CDS 30.0%
AACTCAAAGACAAATACAGA+TGG + chr4_1:83758020-83758039 Msa0579100:CDS 30.0%
AAATACAGATGGCACAATAT+TGG + chr4_1:83758031-83758050 Msa0579100:CDS 30.0%
CTACCATACAATACAGAATT+TGG - chr4_1:83758067-83758086 None:intergenic 30.0%
CTATTTCCAATATCAGAAGA+AGG - chr4_1:83758193-83758212 None:intergenic 30.0%
TCTTCTGATATTGGAAATAG+TGG + chr4_1:83758193-83758212 Msa0579100:CDS 30.0%
ATAACACTAGCAATGAACAA+TGG + chr4_1:83758316-83758335 Msa0579100:CDS 30.0%
AGTCCAATATGATGATTCAT+TGG + chr4_1:83758384-83758403 Msa0579100:CDS 30.0%
GATCCAATGAATCATCATAT+TGG - chr4_1:83758390-83758409 None:intergenic 30.0%
TATGATGATTCATTGGATCA+TGG + chr4_1:83758391-83758410 Msa0579100:CDS 30.0%
GATTCTCAAAATAGCAATCA+TGG + chr4_1:83758436-83758455 Msa0579100:CDS 30.0%
!! TTGGTTTTCTTTTTGTCAAC+CGG - chr4_1:83758615-83758634 None:intergenic 30.0%
ACAACTTTGGTTGTTGTATT+AGG - chr4_1:83759117-83759136 None:intergenic 30.0%
ATGCACTCTTGTTGAAATTT+GGG - chr4_1:83759260-83759279 None:intergenic 30.0%
GAAGACAAAGACATTAATCT+TGG + chr4_1:83759285-83759304 Msa0579100:CDS 30.0%
CATAAAGATGTTATTGGAAG+TGG + chr4_1:83759354-83759373 Msa0579100:CDS 30.0%
TGTCAAGAAAAAGCAAATGT+TGG + chr4_1:83759690-83759709 Msa0579100:CDS 30.0%
TCCATCATTTAATTCAGGAA+GGG - chr4_1:83759718-83759737 None:intergenic 30.0%
ATCCATCATTTAATTCAGGA+AGG - chr4_1:83759719-83759738 None:intergenic 30.0%
TCTGATCCATCATTTAATTC+AGG - chr4_1:83759723-83759742 None:intergenic 30.0%
ACTGTTCATGCATTAATTGA+TGG + chr4_1:83760068-83760087 Msa0579100:CDS 30.0%
!! TTTTTGTTATCCACACATTC+TGG - chr4_1:83760287-83760306 None:intergenic 30.0%
TCTCAAGAAAAAGCAAATGT+TGG + chr4_1:83760428-83760447 Msa0579100:CDS 30.0%
GGATAACAAAAATCACCAAA+AGG + chr4_1:83760487-83760506 Msa0579100:CDS 30.0%
! ATCTTTTGGCATTTTGTCAT+TGG - chr4_1:83760732-83760751 None:intergenic 30.0%
AATAGTGTGTGATTAAGCGA+TGG - chr4_1:83755808-83755827 None:intergenic 35.0%
GTCAAACGTGAAGAACATTT+GGG + chr4_1:83756256-83756275 Msa0579100:five_prime_UTR 35.0%
TCAAACGTGAAGAACATTTG+GGG + chr4_1:83756257-83756276 Msa0579100:five_prime_UTR 35.0%
! AGAACATTTGGGGTATATGA+TGG + chr4_1:83756267-83756286 Msa0579100:five_prime_UTR 35.0%
TTAGGTTTACCGTAACAATG+AGG + chr4_1:83756354-83756373 Msa0579100:exon 35.0%
TAGGTTTACCGTAACAATGA+GGG + chr4_1:83756355-83756374 Msa0579100:exon 35.0%
ATCATTGACCCTCATTGTTA+CGG - chr4_1:83756366-83756385 None:intergenic 35.0%
ATAAAGATTGCACCGAAAAC+CGG - chr4_1:83756419-83756438 None:intergenic 35.0%
GAGAAGAGAATGTTTCAAGA+AGG + chr4_1:83756454-83756473 Msa0579100:CDS 35.0%
TGTTTCAAGAAGGGATTGTT+TGG + chr4_1:83756464-83756483 Msa0579100:CDS 35.0%
GTTTCAAGAAGGGATTGTTT+GGG + chr4_1:83756465-83756484 Msa0579100:CDS 35.0%
ACGAATGGGATATAAGAAGA+CGG - chr4_1:83756494-83756513 None:intergenic 35.0%
GCATAATCTTCTCTACGAAT+GGG - chr4_1:83756508-83756527 None:intergenic 35.0%
! ACTACTTCATGGTGTTTTCA+AGG + chr4_1:83756565-83756584 Msa0579100:CDS 35.0%
!! TGTTTTCAAGGCTACTTCTA+AGG + chr4_1:83756577-83756596 Msa0579100:CDS 35.0%
!! GTTTTCAAGGCTACTTCTAA+GGG + chr4_1:83756578-83756597 Msa0579100:CDS 35.0%
TACCATTGATCTTCTGCTTT+AGG + chr4_1:83756756-83756775 Msa0579100:intron 35.0%
AACCTAAAGCAGAAGATCAA+TGG - chr4_1:83756761-83756780 None:intergenic 35.0%
AGGTTAAGTTCACTGAGATT+TGG + chr4_1:83756776-83756795 Msa0579100:intron 35.0%
!! CGAAATATCTTTTCAGGAAG+GGG - chr4_1:83756811-83756830 None:intergenic 35.0%
!! CTCGAAATATCTTTTCAGGA+AGG - chr4_1:83756813-83756832 None:intergenic 35.0%
! GCATCTCGAAATATCTTTTC+AGG - chr4_1:83756817-83756836 None:intergenic 35.0%
! GCAGCTAACAAGTTTAACTT+TGG + chr4_1:83756856-83756875 Msa0579100:CDS 35.0%
! AAGTTTAACTTTGGGCTATC+TGG + chr4_1:83756865-83756884 Msa0579100:CDS 35.0%
TGGTAATTATGCATCAAGAC+AGG - chr4_1:83757251-83757270 None:intergenic 35.0%
GTCTTGATGCATAATTACCA+AGG + chr4_1:83757251-83757270 Msa0579100:CDS 35.0%
GAATATTCTGCACGATACAA+TGG + chr4_1:83757275-83757294 Msa0579100:CDS 35.0%
TGCCATTAAAAGATGAAAGC+AGG + chr4_1:83757387-83757406 Msa0579100:CDS 35.0%
! AGCCTGCTTTCATCTTTTAA+TGG - chr4_1:83757392-83757411 None:intergenic 35.0%
!! TGGGTATGTTGGTGATTATT+TGG + chr4_1:83757478-83757497 Msa0579100:CDS 35.0%
CCATATAATCGTTGTTCTCA+AGG - chr4_1:83757532-83757551 None:intergenic 35.0%
CCTTGAGAACAACGATTATA+TGG + chr4_1:83757529-83757548 Msa0579100:CDS 35.0%
AACATCATCAGAAGGAATGT+CGG - chr4_1:83757591-83757610 None:intergenic 35.0%
TGAACTCTAACATCATCAGA+AGG - chr4_1:83757599-83757618 None:intergenic 35.0%
! TCTGATGATGTTAGAGTTCA+TGG + chr4_1:83757599-83757618 Msa0579100:CDS 35.0%
! TGGTCAGAGGATGATATTTT+CGG + chr4_1:83757676-83757695 Msa0579100:CDS 35.0%
ACATTGGAATCACGTAAACT+AGG - chr4_1:83757710-83757729 None:intergenic 35.0%
!! AGGAAGTGCTTAAATGGAAT+GGG - chr4_1:83757820-83757839 None:intergenic 35.0%
TGTATTGTATGGTAGCAACA+GGG + chr4_1:83758072-83758091 Msa0579100:CDS 35.0%
GTCAGAATCTGCTTTATATG+AGG + chr4_1:83758123-83758142 Msa0579100:CDS 35.0%
GCTAGTGTTATATCATGACT+CGG - chr4_1:83758307-83758326 None:intergenic 35.0%
! ATTAAGTTCTGATGTTCCTC+TGG + chr4_1:83758342-83758361 Msa0579100:CDS 35.0%
AAATTATCCCAATTTGCCAG+AGG - chr4_1:83758361-83758380 None:intergenic 35.0%
ATTGGATCATGGATACGATA+TGG + chr4_1:83758402-83758421 Msa0579100:CDS 35.0%
TTGGATCATGGATACGATAT+GGG + chr4_1:83758403-83758422 Msa0579100:CDS 35.0%
ATGCACGTGATGTTAACAAA+CGG + chr4_1:83758500-83758519 Msa0579100:CDS 35.0%
AAACAGAAACAATGCACAGA+AGG + chr4_1:83758525-83758544 Msa0579100:CDS 35.0%
CACTTCATCAACTGAAGTAA+TGG - chr4_1:83758563-83758582 None:intergenic 35.0%
!! TACTTCAGTTGATGAAGTGA+TGG + chr4_1:83758564-83758583 Msa0579100:CDS 35.0%
!! AGTTGATGAAGTGATGGAAA+TGG + chr4_1:83758570-83758589 Msa0579100:CDS 35.0%
GCAACAATACTGAAAGTTTG+AGG + chr4_1:83758647-83758666 Msa0579100:CDS 35.0%
!! TGATTGCTTTGAAAATGCCT+TGG + chr4_1:83758705-83758724 Msa0579100:CDS 35.0%
ACAACAAGGATGAAAGCTTA+AGG + chr4_1:83758731-83758750 Msa0579100:CDS 35.0%
! AGATCTCTTTGAAAATGCCT+TGG + chr4_1:83758789-83758808 Msa0579100:CDS 35.0%
ACAATGAGGATGAAAGTTTG+AGG + chr4_1:83758902-83758921 Msa0579100:CDS 35.0%
GATGAAAGTTTGAGGAAGAA+AGG + chr4_1:83758910-83758929 Msa0579100:CDS 35.0%
AACGAAGAAAAGAGATTGCT+CGG + chr4_1:83758951-83758970 Msa0579100:CDS 35.0%
CTTCTTCTTCTTCATACTAC+AGG - chr4_1:83759028-83759047 None:intergenic 35.0%
!! AGATTGCTTTGAAAATGCCT+TGG + chr4_1:83759050-83759069 Msa0579100:CDS 35.0%
TGCCTTGGATGATCTAAATA+CGG + chr4_1:83759065-83759084 Msa0579100:CDS 35.0%
ATCCGTATTTAGATCATCCA+AGG - chr4_1:83759070-83759089 None:intergenic 35.0%
ACGCTTGAAATCAACAACTT+TGG - chr4_1:83759130-83759149 None:intergenic 35.0%
! CTCACTCTTTTTACTCTCAT+TGG - chr4_1:83759196-83759215 None:intergenic 35.0%
!! AAGAGTGAGAATTTGTTGGT+TGG + chr4_1:83759207-83759226 Msa0579100:CDS 35.0%
!! AGAGTGAGAATTTGTTGGTT+GGG + chr4_1:83759208-83759227 Msa0579100:CDS 35.0%
GATGCACTCTTGTTGAAATT+TGG - chr4_1:83759261-83759280 None:intergenic 35.0%
GACAAAGACATTAATCTTGG+CGG + chr4_1:83759288-83759307 Msa0579100:CDS 35.0%
TTACGACTTGCATTTAGCAA+TGG - chr4_1:83759333-83759352 None:intergenic 35.0%
TATTGGAAGTGGATGTACAT+TGG + chr4_1:83759365-83759384 Msa0579100:CDS 35.0%
TCCACTGAAGATAAATTCTG+TGG - chr4_1:83759481-83759500 None:intergenic 35.0%
ACAGAATTTATCTTCAGTGG+AGG + chr4_1:83759480-83759499 Msa0579100:CDS 35.0%
CCCATCAAATAATGTAGGAA+GGG - chr4_1:83759526-83759545 None:intergenic 35.0%
CCCTTCCTACATTATTTGAT+GGG + chr4_1:83759523-83759542 Msa0579100:CDS 35.0%
ACCCATCAAATAATGTAGGA+AGG - chr4_1:83759527-83759546 None:intergenic 35.0%
TCTGACCCATCAAATAATGT+AGG - chr4_1:83759531-83759550 None:intergenic 35.0%
! AAGCTGAGAACAAAACCTTT+TGG - chr4_1:83759575-83759594 None:intergenic 35.0%
! TGACGAGAGTTTTCATAACA+AGG + chr4_1:83759602-83759621 Msa0579100:CDS 35.0%
! GAGAGTTTTCATAACAAGGA+AGG + chr4_1:83759606-83759625 Msa0579100:CDS 35.0%
ACCCTTCCTGAATTAAATGA+TGG + chr4_1:83759714-83759733 Msa0579100:CDS 35.0%
!! AAATGATGGATCAGAATGTG+CGG + chr4_1:83759728-83759747 Msa0579100:CDS 35.0%
! AAAAGCAGTATCTCTGAAGA+CGG + chr4_1:83759842-83759861 Msa0579100:CDS 35.0%
ACCTTTCCTGCATTAAATGA+TGG + chr4_1:83759906-83759925 Msa0579100:CDS 35.0%
TCCATCATTTAATGCAGGAA+AGG - chr4_1:83759910-83759929 None:intergenic 35.0%
TCTGATCCATCATTTAATGC+AGG - chr4_1:83759915-83759934 None:intergenic 35.0%
!! AAATGATGGATCAGAATGTG+CGG + chr4_1:83759728-83759747 Msa0579100:CDS 35.0%
GGATAGCAAAAATGACCAAA+AGG + chr4_1:83759941-83759960 Msa0579100:CDS 35.0%
! AAGCTGAGAACAAAACCTTT+TGG - chr4_1:83759575-83759594 None:intergenic 35.0%
! AAAAGTAGCATCTCTGAAGA+TGG + chr4_1:83760004-83760023 Msa0579100:CDS 35.0%
! TCATGCATTAATTGATGGAC+CGG + chr4_1:83760073-83760092 Msa0579100:CDS 35.0%
! TTTTTGTCATCCACACATTC+CGG - chr4_1:83760095-83760114 None:intergenic 35.0%
GGATGACAAAAATCACCAAA+AGG + chr4_1:83760103-83760122 Msa0579100:CDS 35.0%
! AAGCTGAAGACAAAACCTTT+TGG - chr4_1:83760121-83760140 None:intergenic 35.0%
TCCATCATTTAATCCAGGAA+GGG - chr4_1:83760264-83760283 None:intergenic 35.0%
GGATAACAAAAACCACCAAA+AGG + chr4_1:83760295-83760314 Msa0579100:CDS 35.0%
TCTTCATTCCAAGTAGTTGA+GGG - chr4_1:83760326-83760345 None:intergenic 35.0%
ACTCTTCATGCACTAAATGA+TGG + chr4_1:83760452-83760471 Msa0579100:CDS 35.0%
!! AAATGATGGATCAGAATGTG+CGG + chr4_1:83759728-83759747 Msa0579100:CDS 35.0%
TATCATACATGAACCATCCT+TGG - chr4_1:83760552-83760571 None:intergenic 35.0%
GACAAAATGCCAAAAGATTG+TGG + chr4_1:83760734-83760753 Msa0579100:CDS 35.0%
! ATCTTTAGCTTCAATGGAGA+AGG - chr4_1:83760762-83760781 None:intergenic 35.0%
TTCTCCATTGAAGCTAAAGA+TGG + chr4_1:83760761-83760780 Msa0579100:CDS 35.0%
! AGAACCATCTTTAGCTTCAA+TGG - chr4_1:83760768-83760787 None:intergenic 35.0%
TCTGAATATTTAGGGAATGC+CGG + chr4_1:83760785-83760804 Msa0579100:CDS 35.0%
!! AACTGGAGCATTTTCATTAC+CGG - chr4_1:83760807-83760826 None:intergenic 35.0%
ATGTGACAAGAAGTTTCAAC+TGG - chr4_1:83760824-83760843 None:intergenic 35.0%
TGAAACTTCTTGTCACATTG+AGG + chr4_1:83760826-83760845 Msa0579100:CDS 35.0%
GAAAAAGAAGAAGAGAGCGA+AGG - chr4_1:83755784-83755803 None:intergenic 40.0%
GTAAAGCAGCATAATCGGAA+CGG - chr4_1:83755905-83755924 None:intergenic 40.0%
GGTCAAACGTGAAGAACATT+TGG + chr4_1:83756255-83756274 Msa0579100:intron 40.0%
CGAATGGGATATAAGAAGAC+GGG - chr4_1:83756493-83756512 None:intergenic 40.0%
GGCATAATCTTCTCTACGAA+TGG - chr4_1:83756509-83756528 None:intergenic 40.0%
AGAGAAGATTATGCCCGATA+TGG + chr4_1:83756514-83756533 Msa0579100:CDS 40.0%
AGGTAGCAATATCGATCCTA+AGG + chr4_1:83756601-83756620 Msa0579100:CDS 40.0%
! CTAAGGCATTCACTTTGCTA+GGG + chr4_1:83756618-83756637 Msa0579100:CDS 40.0%
CGACATGAACAAGTTAGAAC+CGG + chr4_1:83757016-83757035 Msa0579100:CDS 40.0%
! GTTGGAAGATCTTTTGGTCA+TGG + chr4_1:83757104-83757123 Msa0579100:CDS 40.0%
ATCGTGCAGAATATTCTCCT+TGG - chr4_1:83757271-83757290 None:intergenic 40.0%
!! CTTGGAGTGGATTATACAAG+TGG + chr4_1:83757347-83757366 Msa0579100:CDS 40.0%
TCTCTCTGGATACTGCAAAT+GGG + chr4_1:83757459-83757478 Msa0579100:CDS 40.0%
GATACTGCAAATGGGTATGT+TGG + chr4_1:83757467-83757486 Msa0579100:CDS 40.0%
ATTATATGGGCACACATCTC+AGG + chr4_1:83757543-83757562 Msa0579100:CDS 40.0%
GATGTTAGAGTTCATGGTGA+TGG + chr4_1:83757605-83757624 Msa0579100:CDS 40.0%
GCAGGTCATCAATTAGTGAT+AGG + chr4_1:83757627-83757646 Msa0579100:CDS 40.0%
GGTGAAGACCTAAGAAATAG+TGG + chr4_1:83757656-83757675 Msa0579100:CDS 40.0%
ACCTAAGAAATAGTGGTCAG+AGG + chr4_1:83757663-83757682 Msa0579100:CDS 40.0%
! TCCTCTGACCACTATTTCTT+AGG - chr4_1:83757667-83757686 None:intergenic 40.0%
!! CAGGAAGTGCTTAAATGGAA+TGG - chr4_1:83757821-83757840 None:intergenic 40.0%
!! TTGCACAGGAAGTGCTTAAA+TGG - chr4_1:83757826-83757845 None:intergenic 40.0%
CTGTATTGTATGGTAGCAAC+AGG + chr4_1:83758071-83758090 Msa0579100:CDS 40.0%
AGGGAATGCATACAAAACTC+TGG + chr4_1:83758091-83758110 Msa0579100:CDS 40.0%
CCAATATCAGAAGAAGGGAT+AGG - chr4_1:83758187-83758206 None:intergenic 40.0%
CCTATCCCTTCTTCTGATAT+TGG + chr4_1:83758184-83758203 Msa0579100:CDS 40.0%
CTGATATTGGAAATAGTGGC+AGG + chr4_1:83758197-83758216 Msa0579100:CDS 40.0%
GGACTATAATGTTCATCCCA+TGG + chr4_1:83758267-83758286 Msa0579100:CDS 40.0%
GGATATTCTTGCAATGCCAT+GGG - chr4_1:83758286-83758305 None:intergenic 40.0%
TGATGTTCCTCTGGCAAATT+GGG + chr4_1:83758351-83758370 Msa0579100:CDS 40.0%
TGCACGTGATGTTAACAAAC+GGG + chr4_1:83758501-83758520 Msa0579100:CDS 40.0%
AATGCACAGAAGGAGGAATA+TGG + chr4_1:83758535-83758554 Msa0579100:CDS 40.0%
! AAGTGATGGAAATGGTTCGT+CGG + chr4_1:83758578-83758597 Msa0579100:CDS 40.0%
! GTTTTCTTTTTGTCAACCGG+TGG - chr4_1:83758612-83758631 None:intergenic 40.0%
!! TCAGTATTGTTGCGCTGATT+GGG - chr4_1:83758640-83758659 None:intergenic 40.0%
! TTCAGTATTGTTGCGCTGAT+TGG - chr4_1:83758641-83758660 None:intergenic 40.0%
AAATGCCTTGGAACACAACA+AGG + chr4_1:83758717-83758736 Msa0579100:CDS 40.0%
! TTCATCCTTGTTGTGTTCCA+AGG - chr4_1:83758725-83758744 None:intergenic 40.0%
ACAACGAGGATGAAAGTTTG+AGG + chr4_1:83758815-83758834 Msa0579100:CDS 40.0%
!! AGATTGCTCTGAAAATGCCT+TGG + chr4_1:83758876-83758895 Msa0579100:CDS 40.0%
!! GATTGCTCTGAAAATGCCTT+GGG + chr4_1:83758877-83758896 Msa0579100:CDS 40.0%
ACAACGAGGATGAAAGTTTG+AGG + chr4_1:83758815-83758834 Msa0579100:CDS 40.0%
GCCACAGAATTTATCTTCAG+TGG + chr4_1:83759477-83759496 Msa0579100:CDS 40.0%
GCCCTTCCTACATTATTTGA+TGG + chr4_1:83759522-83759541 Msa0579100:CDS 40.0%
! ATTTGATGGGTCAGAATGTG+CGG + chr4_1:83759536-83759555 Msa0579100:CDS 40.0%
CAAGGAAGGTTCATGTATGA+TGG + chr4_1:83759620-83759639 Msa0579100:CDS 40.0%
TAATGTAGAAGCAGCATCTC+TGG + chr4_1:83759644-83759663 Msa0579100:CDS 40.0%
! TCACCAGAAGTTTTTGTCCT+CGG + chr4_1:83759761-83759780 Msa0579100:CDS 40.0%
TGTCAACAAAAAGCAAACGC+TGG + chr4_1:83759882-83759901 Msa0579100:CDS 40.0%
TGAAGAGAGTTCTTGTACCA+AGG + chr4_1:83760148-83760167 Msa0579100:CDS 40.0%
TACCAAGGAAGGTTCATGTA+TGG + chr4_1:83760163-83760182 Msa0579100:CDS 40.0%
ACCCTTCCTGGATTAAATGA+TGG + chr4_1:83760260-83760279 Msa0579100:CDS 40.0%
GTCCATCATTTAATCCAGGA+AGG - chr4_1:83760265-83760284 None:intergenic 40.0%
TCTGGTCCATCATTTAATCC+AGG - chr4_1:83760269-83760288 None:intergenic 40.0%
!! AAATGATGGACCAGAATGTG+TGG + chr4_1:83760274-83760293 Msa0579100:CDS 40.0%
CTCTTCATTCCAAGTAGTTG+AGG - chr4_1:83760327-83760346 None:intergenic 40.0%
TGAAGAGAGTTCTCATACCA+AGG + chr4_1:83760340-83760359 Msa0579100:CDS 40.0%
! AAGCTGAGGACAAAACCTTT+TGG - chr4_1:83760505-83760524 None:intergenic 40.0%
CAAGGAAGGTTCATGTATGA+TGG + chr4_1:83759620-83759639 Msa0579100:CDS 40.0%
AAGGGAAAGGAGAGAAGAGA+CGG - chr4_1:83755712-83755731 None:intergenic 45.0%
!!! AGGTTTTAGGTTTGGTGAGC+GGG - chr4_1:83755735-83755754 None:intergenic 45.0%
!!! GAGGTTTTAGGTTTGGTGAG+CGG - chr4_1:83755736-83755755 None:intergenic 45.0%
!!! AGAGGAGGAGGTTTTAGGTT+TGG - chr4_1:83755743-83755762 None:intergenic 45.0%
TTGTTCCGATCATTCTCTGC+TGG + chr4_1:83755982-83756001 Msa0579100:intron 45.0%
CTACACCAGCAGAGAATGAT+CGG - chr4_1:83755990-83756009 None:intergenic 45.0%
AACCACAACAACAATGCTCG+CGG + chr4_1:83756386-83756405 Msa0579100:CDS 45.0%
! TTCAAGGCTACTTCTAAGGG+AGG + chr4_1:83756581-83756600 Msa0579100:CDS 45.0%
CCTAGCAAAGTGAATGCCTT+AGG - chr4_1:83756620-83756639 None:intergenic 45.0%
! CCTAAGGCATTCACTTTGCT+AGG + chr4_1:83756617-83756636 Msa0579100:CDS 45.0%
AGGGATACAATATCCTGCTC+AGG + chr4_1:83756637-83756656 Msa0579100:CDS 45.0%
GGTATGCGCTTGTACATGAT+TGG + chr4_1:83756894-83756913 Msa0579100:intron 45.0%
CATGAACAAGTTAGAACCGG+AGG + chr4_1:83757019-83757038 Msa0579100:CDS 45.0%
ACATCAGAGCAGTACTCAGT+TGG + chr4_1:83757077-83757096 Msa0579100:CDS 45.0%
! GGCGAAGTTGGAAGATCTTT+TGG + chr4_1:83757098-83757117 Msa0579100:CDS 45.0%
GGTCATGGAATGCTTGATGA+AGG + chr4_1:83757119-83757138 Msa0579100:CDS 45.0%
! GCTGGAAGATCTTTTGGTCA+TGG + chr4_1:83757173-83757192 Msa0579100:CDS 45.0%
CAAAGAAGGTCTTCTGAGCT+TGG + chr4_1:83757329-83757348 Msa0579100:CDS 45.0%
TGCAGTATCCAGAGAGAGTT+TGG - chr4_1:83757456-83757475 None:intergenic 45.0%
CTCTCTCTGGATACTGCAAA+TGG + chr4_1:83757458-83757477 Msa0579100:CDS 45.0%
TGGCAAGAAAAGATGACAGC+AGG + chr4_1:83757498-83757517 Msa0579100:CDS 45.0%
!! TTAGAGTTCATGGTGATGGC+AGG + chr4_1:83757609-83757628 Msa0579100:CDS 45.0%
ATCTGCCTGTCTTCTACAAC+AGG + chr4_1:83757732-83757751 Msa0579100:CDS 45.0%
TTAGGCCTGTTGTAGAAGAC+AGG - chr4_1:83757740-83757759 None:intergenic 45.0%
CTGTATGATTCAGATGCTCC+TGG + chr4_1:83757869-83757888 Msa0579100:CDS 45.0%
ATGCTCCTGGCTTAAACTTC+AGG + chr4_1:83757882-83757901 Msa0579100:CDS 45.0%
! TTCAGGCAGCTACCATCTTT+TGG + chr4_1:83757899-83757918 Msa0579100:CDS 45.0%
CTTTCTCCATCAACCAACTG+CGG + chr4_1:83757956-83757975 Msa0579100:CDS 45.0%
CGGAAGGAATTCAACGAGTA+GGG + chr4_1:83757976-83757995 Msa0579100:CDS 45.0%
AGTTCTGTATGCACGAGTTG+TGG - chr4_1:83758004-83758023 None:intergenic 45.0%
CATACAAAACTCTGGCCAGT+TGG + chr4_1:83758099-83758118 Msa0579100:CDS 45.0%
AGGAGCTGACGAAGACTTTA+AGG - chr4_1:83758167-83758186 None:intergenic 45.0%
CGGATATTCTTGCAATGCCA+TGG - chr4_1:83758287-83758306 None:intergenic 45.0%
CTGATGTTCCTCTGGCAAAT+TGG + chr4_1:83758350-83758369 Msa0579100:CDS 45.0%
GGATACGATATGGGATGTCA+TGG + chr4_1:83758412-83758431 Msa0579100:CDS 45.0%
CAGAAACAATGCACAGAAGG+AGG + chr4_1:83758528-83758547 Msa0579100:CDS 45.0%
AAACTCAAGTCACCAGTCAG+AGG + chr4_1:83758758-83758777 Msa0579100:CDS 45.0%
ATCTCTCTTCTTCCTCTGAC+TGG - chr4_1:83758773-83758792 None:intergenic 45.0%
AAATGCCTTGGAACACAACG+AGG + chr4_1:83758801-83758820 Msa0579100:CDS 45.0%
TTCATCCTCGTTGTGTTCCA+AGG - chr4_1:83758809-83758828 None:intergenic 45.0%
AAATGCCTTGGGACACAATG+AGG + chr4_1:83758888-83758907 Msa0579100:CDS 45.0%
TTCATCCTCATTGTGTCCCA+AGG - chr4_1:83758896-83758915 None:intergenic 45.0%
AGATTGCTCGGAGAATGTCT+TGG + chr4_1:83758963-83758982 Msa0579100:CDS 45.0%
GAATGTCTTGGAACACAACG+AGG + chr4_1:83758975-83758994 Msa0579100:CDS 45.0%
!! TGATTTCAAGCGTCGAAGCA+AGG + chr4_1:83759137-83759156 Msa0579100:CDS 45.0%
ATCTTCAGTGGAGGAGAGAA+AGG + chr4_1:83759489-83759508 Msa0579100:CDS 45.0%
TCTTCAGTGGAGGAGAGAAA+GGG + chr4_1:83759490-83759509 Msa0579100:CDS 45.0%
GAGGACAAAAACTTCTGGTG+AGG - chr4_1:83759762-83759781 None:intergenic 45.0%
AAGCCGAGGACAAAAACTTC+TGG - chr4_1:83759767-83759786 None:intergenic 45.0%
TGAAGAGAGTTCTCATACCG+AGG + chr4_1:83759794-83759813 Msa0579100:CDS 45.0%
GAAGAGAGTTCTCATACCGA+GGG + chr4_1:83759795-83759814 Msa0579100:CDS 45.0%
TACCGAGGGAAGTTCATGTA+TGG + chr4_1:83759809-83759828 Msa0579100:CDS 45.0%
CACCATACATGAACTTCCCT+CGG - chr4_1:83759814-83759833 None:intergenic 45.0%
! AATTGATGGACCGGAATGTG+TGG + chr4_1:83760082-83760101 Msa0579100:CDS 45.0%
GAGAGTTCTTGTACCAAGGA+AGG + chr4_1:83760152-83760171 Msa0579100:CDS 45.0%
CACCATACATGAACCTTCCT+TGG - chr4_1:83760168-83760187 None:intergenic 45.0%
CAAGGAAGGTTCATGTATGG+TGG + chr4_1:83760166-83760185 Msa0579100:CDS 45.0%
! TAGTTGAGGGCAAAGCCTTT+TGG - chr4_1:83760313-83760332 None:intergenic 45.0%
GAGAGTTCTCATACCAAGGA+AGG + chr4_1:83760344-83760363 Msa0579100:CDS 45.0%
CTCATACCAAGGAAGGTTCA+CGG + chr4_1:83760351-83760370 Msa0579100:CDS 45.0%
TCATACCAAGGAAGGTTCAC+GGG + chr4_1:83760352-83760371 Msa0579100:CDS 45.0%
GTCTTCATTGCAAGAAGCTG+AGG - chr4_1:83759973-83759992 None:intergenic 45.0%
TGAAGACAGCTCTCATACCA+AGG + chr4_1:83760532-83760551 Msa0579100:CDS 45.0%
! GAGAAGGAGCCACAATCTTT+TGG - chr4_1:83760746-83760765 None:intergenic 45.0%
!! TATGTATATAAAAAAATAAA+AGG - chr4_1:83755857-83755876 None:intergenic 5.0%
! AAGGAGAGAAGAGACGGGTT+CGG - chr4_1:83755706-83755725 None:intergenic 50.0%
AGGGAAAGGAGAGAAGAGAC+GGG - chr4_1:83755711-83755730 None:intergenic 50.0%
!! TTAGGTTTGGTGAGCGGGAA+GGG - chr4_1:83755730-83755749 None:intergenic 50.0%
!! TTTAGGTTTGGTGAGCGGGA+AGG - chr4_1:83755731-83755750 None:intergenic 50.0%
! GGAAGAGAGGAGGAGGTTTT+AGG - chr4_1:83755748-83755767 None:intergenic 50.0%
AACCTCCTCCTCTCTTCCAT+AGG + chr4_1:83755750-83755769 Msa0579100:five_prime_UTR 50.0%
TACACGCACCTATGGAAGAG+AGG - chr4_1:83755761-83755780 None:intergenic 50.0%
! TTCCGCGAGCATTGTTGTTG+TGG - chr4_1:83756391-83756410 None:intergenic 50.0%
CAATGCTCGCGGAAAAGATC+CGG + chr4_1:83756397-83756416 Msa0579100:CDS 50.0%
! CGCGGAAAAGATCCGGTTTT+CGG + chr4_1:83756404-83756423 Msa0579100:CDS 50.0%
CTTTGGGCTATCTGGAGATC+AGG + chr4_1:83756873-83756892 Msa0579100:CDS 50.0%
AGTTAGAACCGGAGGTTCCT+AGG + chr4_1:83757027-83757046 Msa0579100:CDS 50.0%
ATACGTCTCCTAGGAACCTC+CGG - chr4_1:83757038-83757057 None:intergenic 50.0%
! GCTCTAGACATACGTCTCCT+AGG - chr4_1:83757047-83757066 None:intergenic 50.0%
CAGTACTCAGTTGGCGAAGT+TGG + chr4_1:83757086-83757105 Msa0579100:CDS 50.0%
! CCTACTGAGTACGGCTCTAA+TGG - chr4_1:83757149-83757168 None:intergenic 50.0%
CCATTAGAGCCGTACTCAGT+AGG + chr4_1:83757146-83757165 Msa0579100:CDS 50.0%
! GGCGAAGCTGGAAGATCTTT+TGG + chr4_1:83757167-83757186 Msa0579100:CDS 50.0%
AAGGTCTTCTGAGCTTGGAG+TGG + chr4_1:83757334-83757353 Msa0579100:CDS 50.0%
CTATGCTGCCAAACTCTCTC+TGG + chr4_1:83757445-83757464 Msa0579100:CDS 50.0%
CATCTCAGGCCATACAGTGT+AGG + chr4_1:83757557-83757576 Msa0579100:CDS 50.0%
GCGTATCCACCTACACTGTA+TGG - chr4_1:83757569-83757588 None:intergenic 50.0%
GAAGACAGGCAGATCGACAT+TGG - chr4_1:83757726-83757745 None:intergenic 50.0%
AGCACTTCCTGTGCAACACA+AGG + chr4_1:83757830-83757849 Msa0579100:CDS 50.0%
TTCAGCTCCTTGTGTTGCAC+AGG - chr4_1:83757840-83757859 None:intergenic 50.0%
AGCTGCCTGAAGTTTAAGCC+AGG - chr4_1:83757890-83757909 None:intergenic 50.0%
TTCCTTCCGCAGTTGGTTGA+TGG - chr4_1:83757965-83757984 None:intergenic 50.0%
CGTTGAATTCCTTCCGCAGT+TGG - chr4_1:83757972-83757991 None:intergenic 50.0%
GCGGAAGGAATTCAACGAGT+AGG + chr4_1:83757975-83757994 Msa0579100:CDS 50.0%
AAGCAGATTCTGACGCCAAC+TGG - chr4_1:83758117-83758136 None:intergenic 50.0%
!! TTGTTGCGCTGATTGGGTGT+TGG - chr4_1:83758634-83758653 None:intergenic 50.0%
ACGGATTCCACAACTGTGAC+TGG + chr4_1:83759084-83759103 Msa0579100:CDS 50.0%
GATTCCACAACTGTGACTGG+AGG + chr4_1:83759087-83759106 Msa0579100:CDS 50.0%
ATTGCCTCCAGTCACAGTTG+TGG - chr4_1:83759094-83759113 None:intergenic 50.0%
! AGAAGCAGCATCTCTGGAGA+AGG + chr4_1:83759650-83759669 Msa0579100:CDS 50.0%
CTCTTCATTGCAAGAAGCCG+AGG - chr4_1:83759781-83759800 None:intergenic 50.0%
CGAGGGAAGTTCATGTATGG+TGG + chr4_1:83759812-83759831 Msa0579100:CDS 50.0%
! TTGAGGGCAAAGCCTTTTGG+TGG - chr4_1:83760310-83760329 None:intergenic 50.0%
AGGCTTTGCCCTCAACTACT+TGG + chr4_1:83760315-83760334 Msa0579100:CDS 50.0%
GACAGCTCTCATACCAAGGA+TGG + chr4_1:83760536-83760555 Msa0579100:CDS 50.0%
! CAAGCCTTATCCCACCAAGT+GGG + chr4_1:83760579-83760598 Msa0579100:CDS 50.0%
! AAGCCTTATCCCACCAAGTG+GGG + chr4_1:83760580-83760599 Msa0579100:CDS 50.0%
TTTGGTGAGCGGGAAGGGAA+AGG - chr4_1:83755725-83755744 None:intergenic 55.0%
CACCTATGGAAGAGAGGAGG+AGG - chr4_1:83755755-83755774 None:intergenic 55.0%
ACGCACCTATGGAAGAGAGG+AGG - chr4_1:83755758-83755777 None:intergenic 55.0%
! AGCGAAGGTACACGCACCTA+TGG - chr4_1:83755769-83755788 None:intergenic 55.0%
GCATAATCGGAACGGCGCAA+CGG - chr4_1:83755897-83755916 None:intergenic 55.0%
TGGGTTCTTCTCACCTGAGC+AGG - chr4_1:83756653-83756672 None:intergenic 55.0%
CCAGCTTCGCCTACTGAGTA+CGG - chr4_1:83757158-83757177 None:intergenic 55.0%
CTCAGGCCATACAGTGTAGG+TGG + chr4_1:83757560-83757579 Msa0579100:CDS 55.0%
CTCCATCAACCAACTGCGGA+AGG + chr4_1:83757960-83757979 Msa0579100:CDS 55.0%
TTCGTCGGAGTCAAAGCCAC+CGG + chr4_1:83758593-83758612 Msa0579100:CDS 55.0%
!! TCAAGCGTCGAAGCAAGGTG+AGG + chr4_1:83759142-83759161 Msa0579100:CDS 55.0%
GCAATTGCTGACACCCTTCC+TGG + chr4_1:83760248-83760267 Msa0579100:CDS 55.0%
CATCACCCGTGAACCTTCCT+TGG - chr4_1:83760360-83760379 None:intergenic 55.0%
CAAGGAAGGTTCACGGGTGA+TGG + chr4_1:83760358-83760377 Msa0579100:CDS 55.0%
! CCACTTGGTGGGATAAGGCT+TGG - chr4_1:83760581-83760600 None:intergenic 55.0%
! CCAAGCCTTATCCCACCAAG+TGG + chr4_1:83760578-83760597 Msa0579100:CDS 55.0%
CTTATCCCACCAAGTGGGGT+CGG + chr4_1:83760584-83760603 Msa0579100:CDS 55.0%
! GAGAGAAGAGACGGGTTCGG+TGG - chr4_1:83755703-83755722 None:intergenic 60.0%
CCGTACTCAGTAGGCGAAGC+TGG + chr4_1:83757155-83757174 Msa0579100:CDS 60.0%
! CGACCCCACTTGGTGGGATA+AGG - chr4_1:83760586-83760605 None:intergenic 60.0%
!! GGGTTCGGTGGCAGCGCAAT+AGG - chr4_1:83755691-83755710 None:intergenic 65.0%
CCTTGCCGACCCCACTTGGT+GGG - chr4_1:83760592-83760611 None:intergenic 65.0%
TCCTTGCCGACCCCACTTGG+TGG - chr4_1:83760593-83760612 None:intergenic 65.0%
CCTTCCTTGCCGACCCCACT+TGG - chr4_1:83760596-83760615 None:intergenic 65.0%
CCAAGTGGGGTCGGCAAGGA+AGG + chr4_1:83760593-83760612 Msa0579100:CDS 65.0%
CCCACCAAGTGGGGTCGGCA+AGG + chr4_1:83760589-83760608 Msa0579100:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 83755688 83760859 83755688 ID=Msa0579100;Name=Msa0579100
chr4_1 mRNA 83755688 83760859 83755688 ID=Msa0579100-mRNA-1;Parent=Msa0579100;Name=Msa0579100-mRNA-1;_AED=0.03;_eAED=0.03;_QI=199|1|0.75|1|0.66|0.5|4|0|1423
chr4_1 exon 83755688 83755771 83755688 ID=Msa0579100-mRNA-1:exon:30534;Parent=Msa0579100-mRNA-1
chr4_1 exon 83756256 83756658 83756256 ID=Msa0579100-mRNA-1:exon:30535;Parent=Msa0579100-mRNA-1
chr4_1 exon 83756778 83756894 83756778 ID=Msa0579100-mRNA-1:exon:30536;Parent=Msa0579100-mRNA-1
chr4_1 exon 83756993 83760859 83756993 ID=Msa0579100-mRNA-1:exon:30537;Parent=Msa0579100-mRNA-1
chr4_1 five_prime_UTR 83755688 83755771 83755688 ID=Msa0579100-mRNA-1:five_prime_utr;Parent=Msa0579100-mRNA-1
chr4_1 five_prime_UTR 83756256 83756370 83756256 ID=Msa0579100-mRNA-1:five_prime_utr;Parent=Msa0579100-mRNA-1
chr4_1 CDS 83756371 83756658 83756371 ID=Msa0579100-mRNA-1:cds;Parent=Msa0579100-mRNA-1
chr4_1 CDS 83756778 83756894 83756778 ID=Msa0579100-mRNA-1:cds;Parent=Msa0579100-mRNA-1
chr4_1 CDS 83756993 83760859 83756993 ID=Msa0579100-mRNA-1:cds;Parent=Msa0579100-mRNA-1
Gene Sequence

>Msa0579100

ATGAGGGTCAATGATAACCACAACAACAATGCTCGCGGAAAAGATCCGGTTTTCGGTGCAATCTTTATTGCAAACAGTGAATCGAGAAGAGAATGTTTCAAGAAGGGATTGTTTGGGCTCCCGTCTTCTTATATCCCATTCGTAGAGAAGATTATGCCCGATATGGCTTTGTTTTTATTTGATTATGAGAAGAAACTACTTCATGGTGTTTTCAAGGCTACTTCTAAGGGAGGTAGCAATATCGATCCTAAGGCATTCACTTTGCTAGGGATACAATATCCTGCTCAGGTTAAGTTCACTGAGATTTGGAAATGTAAGCCCCTTCCTGAAAAGATATTTCGAGATGCAATCAGAGAGAATTACTTTGCAGCTAACAAGTTTAACTTTGGGCTATCTGGAGATCAGGTCAATAAACTTCTACATTTGTTCGACATGAACAAGTTAGAACCGGAGGTTCCTAGGAGACGTATGTCTAGAGCAGATGATATGACATCAGAGCAGTACTCAGTTGGCGAAGTTGGAAGATCTTTTGGTCATGGAATGCTTGATGAAGGTGTTCCATTAGAGCCGTACTCAGTAGGCGAAGCTGGAAGATCTTTTGGTCATGGAATGCTTGATGAAAATGTTCAAAATGACAGAGTTTTGGGTGATAAAAGTTCACCTGTCTTGATGCATAATTACCAAGGAGAATATTCTGCACGATACAATGGATTCAGTGCAGATGATATTTTAGTAAGCAAACAAAGAAGGTCTTCTGAGCTTGGAGTGGATTATACAAGTGGATATGTTGGTGATTATTTGCCATTAAAAGATGAAAGCAGGCTTGCTGCACGCAACAATGCAGATTATTTAGATAACTATGCTGCCAAACTCTCTCTGGATACTGCAAATGGGTATGTTGGTGATTATTTGGCAAGAAAAGATGACAGCAGGTTTACGTCCCTTGAGAACAACGATTATATGGGCACACATCTCAGGCCATACAGTGTAGGTGGATACGCCGACATTCCTTCTGATGATGTTAGAGTTCATGGTGATGGCAGGTCATCAATTAGTGATAGGTTGATGGGTGAAGACCTAAGAAATAGTGGTCAGAGGATGATATTTTCGGATGATACTCCTAGTTTACGTGATTCCAATGTCGATCTGCCTGTCTTCTACAACAGGCCTAATTTAGAGCAAAGTTCTTTGGTTGAAAATCATTGCAGTTCAACTTCTGCTATGATTCACCCATTCCATTTAAGCACTTCCTGTGCAACACAAGGAGCTGAAAGTTCTATTCTGTATGATTCAGATGCTCCTGGCTTAAACTTCAGGCAGCTACCATCTTTTGGAATTAATAATGGTTCTGAGTCAATAACAGAAAGACTTTCTCCATCAACCAACTGCGGAAGGAATTCAACGAGTAGGGAACCACAACTCGTGCATACAGAACTCAAAGACAAATACAGATGGCACAATATTGGTGATTGTTTTCCAAATTCTGTATTGTATGGTAGCAACAGGGAATGCATACAAAACTCTGGCCAGTTGGCGTCAGAATCTGCTTTATATGAGGCTCGCAGTAACATTTTTTCCTTAAAGTCTTCGTCAGCTCCTATCCCTTCTTCTGATATTGGAAATAGTGGCAGGACACATGAGCCATTTTCTTCACTGTTTGATAATCACAAATCATATTTGGACTATAATGTTCATCCCATGGCATTGCAAGAATATCCGAGTCATGATATAACACTAGCAATGAACAATGGAACATTAAGTTCTGATGTTCCTCTGGCAAATTGGGATAATTTTCAAGTCCAATATGATGATTCATTGGATCATGGATACGATATGGGATGTCATGGTGATTCTCAAAATAGCAATCATGGCCATCCAAATAAAAAAAGTAGTGTGTTTTCTCGTATATCTTATGCACGTGATGTTAACAAACGGGAAAACAGAAACAATGCACAGAAGGAGGAATATGGTTCCATTACTTCAGTTGATGAAGTGATGGAAATGGTTCGTCGGAGTCAAAGCCACCGGTTGACAAAAAGAAAACCAACACCCAATCAGCGCAACAATACTGAAAGTTTGAGGAATAAAACTCAACTCAGTAGTCAGAGCAAGAAGAATGATTGCTTTGAAAATGCCTTGGAACACAACAAGGATGAAAGCTTAAGGAATAAAACTCAAGTCACCAGTCAGAGGAAGAAGAGAGATCTCTTTGAAAATGCCTTGGAACACAACGAGGATGAAAGTTTGAGGAGTAAAACTCAAATCAGTAGTTTGAAAAAGGAGAAAAGAGATTGCTCTGAAAATGCCTTGGGACACAATGAGGATGAAAGTTTGAGGAAGAAAGGTCGAATCATTAGTCTGAAAACGAAGAAAAGAGATTGCTCGGAGAATGTCTTGGAACACAACGAGGATGAAAGTTTGAGGTATAAAACGCAAACCTGTAGTATGAAGAAGAAGAAGAGAGATTGCTTTGAAAATGCCTTGGATGATCTAAATACGGATTCCACAACTGTGACTGGAGGCAATCCTAATACAACAACCAAAGTTGTTGATTTCAAGCGTCGAAGCAAGGTGAGGAAACATAGTGATGAGATTGAGAGAAGCTCCAATGAGAGTAAAAAGAGTGAGAATTTGTTGGTTGGGCAGCAAAAGAGAAGAAAGTTGATTCGCCCAAATTTCAACAAGAGTGCATCTTGTGAAGACAAAGACATTAATCTTGGCGGTTCTCAAAATTTACAACTACCATTGCTAAATGCAAGTCGTAATCATAAAGATGTTATTGGAAGTGGATGTACATTGGTGAACCAGTGTGATTATGATGTTAAAACAGATGCTGAAGTTCAAAACATCAATTATCAAACACAATCTGAAGTTAAGAATAGTAGTCACGCCACAGAATTTATCTTCAGTGGAGGAGAGAAAGGGAACGTTGTCGCCCTTCCTACATTATTTGATGGGTCAGAATGTGCGGATAATAAAAATCACCAAAAGGTTTTGTTCTCAGCTTCTTGCAGTGACGAGAGTTTTCATAACAAGGAAGGTTCATGTATGATGGATAATGTAGAAGCAGCATCTCTGGAGAAGGAATCGTTGCGTGCAATTTGTCAAGAAAAAGCAAATGTTGGCACCCTTCCTGAATTAAATGATGGATCAGAATGTGCGGATAACAAACCTCACCAGAAGTTTTTGTCCTCGGCTTCTTGCAATGAAGAGAGTTCTCATACCGAGGGAAGTTCATGTATGGTGGATAATGTAAAAGCAGTATCTCTGAAGACGGAATCATTGCATGCACTTTGTCAACAAAAAGCAAACGCTGGCACCTTTCCTGCATTAAATGATGGATCAGAATGTGCGGATAGCAAAAATGACCAAAAGGTTTTGTTCTCAGCTTCTTGCAATGAAGACAGTTGTCTAGAAAAAGTAGCATCTCTGAAGATGGAATCATTGCATACAATTTGTCTAGAAAAAGTGAATGTTAGCACTGTTCATGCATTAATTGATGGACCGGAATGTGTGGATGACAAAAATCACCAAAAGGTTTTGTCTTCAGCTTCTTGCAATGAAGAGAGTTCTTGTACCAAGGAAGGTTCATGTATGGTGGATAATGTAAAAGAAGCATCTCTGAAGATTGAATCATTGCATGCAGTTTGTCAAGAAAAAGCAATTGCTGACACCCTTCCTGGATTAAATGATGGACCAGAATGTGTGGATAACAAAAACCACCAAAAGGCTTTGCCCTCAACTACTTGGAATGAAGAGAGTTCTCATACCAAGGAAGGTTCACGGGTGATGGTTAATGTGAAAGAAGCATCTCTGAAGACAGAATCATTGCATGCAGTTTCTCAAGAAAAAGCAAATGTTGGCACTCTTCATGCACTAAATGATGGATCAGAATGTGCGGATAACAAAAATCACCAAAAGGTTTTGTCCTCAGCTTCTTGCAATGAAGACAGCTCTCATACCAAGGATGGTTCATGTATGATACAACAACCAAGCCTTATCCCACCAAGTGGGGTCGGCAAGGAAGGTTCATGTATGATGGATAATGTAAAATCAGCATCTTTGGAGACAGAATCATTGAATGCAATTTGTCAAGAAAATAATGCAGATAAGATCATATGTGCTGACAGATGTATTAATGCCAATGACAAAATGCCAAAAGATTGTGGCTCCTTCTCCATTGAAGCTAAAGATGGTTCTGAATATTTAGGGAATGCCGGTAATGAAAATGCTCCAGTTGAAACTTCTTGTCACATTGAGGCTTGCATGTAG
Protein sequence

>Msa0579100

MRVNDNHNNNARGKDPVFGAIFIANSESRRECFKKGLFGLPSSYIPFVEKIMPDMALFLFDYEKKLLHGVFKATSKGGSNIDPKAFTLLGIQYPAQVKFTEIWKCKPLPEKIFRDAIRENYFAANKFNFGLSGDQVNKLLHLFDMNKLEPEVPRRRMSRADDMTSEQYSVGEVGRSFGHGMLDEGVPLEPYSVGEAGRSFGHGMLDENVQNDRVLGDKSSPVLMHNYQGEYSARYNGFSADDILVSKQRRSSELGVDYTSGYVGDYLPLKDESRLAARNNADYLDNYAAKLSLDTANGYVGDYLARKDDSRFTSLENNDYMGTHLRPYSVGGYADIPSDDVRVHGDGRSSISDRLMGEDLRNSGQRMIFSDDTPSLRDSNVDLPVFYNRPNLEQSSLVENHCSSTSAMIHPFHLSTSCATQGAESSILYDSDAPGLNFRQLPSFGINNGSESITERLSPSTNCGRNSTSREPQLVHTELKDKYRWHNIGDCFPNSVLYGSNRECIQNSGQLASESALYEARSNIFSLKSSSAPIPSSDIGNSGRTHEPFSSLFDNHKSYLDYNVHPMALQEYPSHDITLAMNNGTLSSDVPLANWDNFQVQYDDSLDHGYDMGCHGDSQNSNHGHPNKKSSVFSRISYARDVNKRENRNNAQKEEYGSITSVDEVMEMVRRSQSHRLTKRKPTPNQRNNTESLRNKTQLSSQSKKNDCFENALEHNKDESLRNKTQVTSQRKKRDLFENALEHNEDESLRSKTQISSLKKEKRDCSENALGHNEDESLRKKGRIISLKTKKRDCSENVLEHNEDESLRYKTQTCSMKKKKRDCFENALDDLNTDSTTVTGGNPNTTTKVVDFKRRSKVRKHSDEIERSSNESKKSENLLVGQQKRRKLIRPNFNKSASCEDKDINLGGSQNLQLPLLNASRNHKDVIGSGCTLVNQCDYDVKTDAEVQNINYQTQSEVKNSSHATEFIFSGGEKGNVVALPTLFDGSECADNKNHQKVLFSASCSDESFHNKEGSCMMDNVEAASLEKESLRAICQEKANVGTLPELNDGSECADNKPHQKFLSSASCNEESSHTEGSSCMVDNVKAVSLKTESLHALCQQKANAGTFPALNDGSECADSKNDQKVLFSASCNEDSCLEKVASLKMESLHTICLEKVNVSTVHALIDGPECVDDKNHQKVLSSASCNEESSCTKEGSCMVDNVKEASLKIESLHAVCQEKAIADTLPGLNDGPECVDNKNHQKALPSTTWNEESSHTKEGSRVMVNVKEASLKTESLHAVSQEKANVGTLHALNDGSECADNKNHQKVLSSASCNEDSSHTKDGSCMIQQPSLIPPSGVGKEGSCMMDNVKSASLETESLNAICQENNADKIICADRCINANDKMPKDCGSFSIEAKDGSEYLGNAGNENAPVETSCHIEACM*