Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343720 | XP_003616242.1 | 97.165 | 388 | 9 | 1 | 1 | 386 | 1 | 388 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343720 | sp|Q8RWB7|PMT12_ARATH | 41.096 | 292 | 150 | 7 | 92 | 381 | 104 | 375 | 7.52e-72 | 232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343720 | G7KG13 | 97.165 | 388 | 9 | 1 | 1 | 386 | 1 | 388 | 0.0 | 770 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012780 | Msa0343720 | 0.809277 | 2.048431e-50 | -8.615850e-47 |
| Msa0012810 | Msa0343720 | 0.811790 | 5.870007e-51 | -8.615850e-47 |
| Msa0012820 | Msa0343720 | 0.819965 | 8.803739e-53 | -8.615850e-47 |
| Msa0024280 | Msa0343720 | 0.818386 | 2.013933e-52 | -8.615850e-47 |
| Msa0025370 | Msa0343720 | 0.809938 | 1.477051e-50 | -8.615850e-47 |
| Msa0048950 | Msa0343720 | 0.844068 | 9.501178e-59 | -8.615850e-47 |
| Msa0059880 | Msa0343720 | 0.870726 | 1.173623e-66 | -8.615850e-47 |
| Msa0061590 | Msa0343720 | 0.803934 | 2.749869e-49 | -8.615850e-47 |
| Msa0061600 | Msa0343720 | 0.818848 | 1.581908e-52 | -8.615850e-47 |
| Msa0072940 | Msa0343720 | 0.811308 | 7.470960e-51 | -8.615850e-47 |
| Msa0106110 | Msa0343720 | 0.805491 | 1.301468e-49 | -8.615850e-47 |
| Msa0106130 | Msa0343720 | 0.812787 | 3.555313e-51 | -8.615850e-47 |
| Msa0108350 | Msa0343720 | 0.802923 | 4.455457e-49 | -8.615850e-47 |
| Msa0112640 | Msa0343720 | 0.811818 | 5.788183e-51 | -8.615850e-47 |
| Msa0121910 | Msa0343720 | 0.805507 | 1.291319e-49 | -8.615850e-47 |
| Msa0129850 | Msa0343720 | 0.818281 | 2.127802e-52 | -8.615850e-47 |
| Msa0139460 | Msa0343720 | 0.824288 | 8.755641e-54 | -8.615850e-47 |
| Msa0143680 | Msa0343720 | 0.801824 | 7.503377e-49 | -8.615850e-47 |
| Msa0143710 | Msa0343720 | 0.810598 | 1.064478e-50 | -8.615850e-47 |
| Msa0143740 | Msa0343720 | 0.806351 | 8.580626e-50 | -8.615850e-47 |
| Msa0143770 | Msa0343720 | 0.803802 | 2.929810e-49 | -8.615850e-47 |
| Msa0150910 | Msa0343720 | 0.841789 | 3.840518e-58 | -8.615850e-47 |
| Msa0152740 | Msa0343720 | 0.801889 | 7.275138e-49 | -8.615850e-47 |
| Msa0155850 | Msa0343720 | 0.810909 | 9.118513e-51 | -8.615850e-47 |
| Msa0163340 | Msa0343720 | 0.830324 | 3.132108e-55 | -8.615850e-47 |
| Msa0176620 | Msa0343720 | 0.800105 | 1.684657e-48 | -8.615850e-47 |
| Msa0177550 | Msa0343720 | 0.802485 | 5.486940e-49 | -8.615850e-47 |
| Msa0190670 | Msa0343720 | 0.805231 | 1.474723e-49 | -8.615850e-47 |
| Msa0212550 | Msa0343720 | 0.827263 | 1.723193e-54 | -8.615850e-47 |
| Msa0216760 | Msa0343720 | 0.821308 | 4.326708e-53 | -8.615850e-47 |
| Msa0223880 | Msa0343720 | 0.806691 | 7.272915e-50 | -8.615850e-47 |
| Msa0252930 | Msa0343720 | 0.824706 | 6.981343e-54 | -8.615850e-47 |
| Msa0265060 | Msa0343720 | 0.803996 | 2.669441e-49 | -8.615850e-47 |
| Msa0266640 | Msa0343720 | 0.817866 | 2.640868e-52 | -8.615850e-47 |
| Msa0266650 | Msa0343720 | 0.806728 | 7.143986e-50 | -8.615850e-47 |
| Msa0274250 | Msa0343720 | 0.806946 | 6.425816e-50 | -8.615850e-47 |
| Msa0274260 | Msa0343720 | 0.800887 | 1.167447e-48 | -8.615850e-47 |
| Msa0278950 | Msa0343720 | 0.809170 | 2.159780e-50 | -8.615850e-47 |
| Msa0295980 | Msa0343720 | 0.818875 | 1.560069e-52 | -8.615850e-47 |
| Msa0298270 | Msa0343720 | 0.805835 | 1.101830e-49 | -8.615850e-47 |
| Msa0340650 | Msa0343720 | 0.803823 | 2.900906e-49 | -8.615850e-47 |
| Msa0343720 | Msa0374130 | 0.808827 | 2.557839e-50 | -8.615850e-47 |
| Msa0343720 | Msa0393900 | 0.813520 | 2.455832e-51 | -8.615850e-47 |
| Msa0343720 | Msa0414480 | 0.810905 | 9.133369e-51 | -8.615850e-47 |
| Msa0343720 | Msa0418150 | 0.842817 | 2.051279e-58 | -8.615850e-47 |
| Msa0343720 | Msa0418160 | 0.825669 | 4.132772e-54 | -8.615850e-47 |
| Msa0343720 | Msa0448310 | 0.800960 | 1.128055e-48 | -8.615850e-47 |
| Msa0343720 | Msa0464300 | 0.830500 | 2.835295e-55 | -8.615850e-47 |
| Msa0343720 | Msa0464310 | 0.802729 | 4.887188e-49 | -8.615850e-47 |
| Msa0343720 | Msa0469550 | 0.812087 | 5.058057e-51 | -8.615850e-47 |
| Msa0343720 | Msa0491770 | 0.818923 | 1.521626e-52 | -8.615850e-47 |
| Msa0343720 | Msa0515260 | 0.811651 | 6.293902e-51 | -8.615850e-47 |
| Msa0343720 | Msa0533510 | 0.818723 | 1.689009e-52 | -8.615850e-47 |
| Msa0343720 | Msa0533520 | 0.808139 | 3.587267e-50 | -8.615850e-47 |
| Msa0343720 | Msa0535570 | 0.812501 | 4.106200e-51 | -8.615850e-47 |
| Msa0343720 | Msa0538440 | 0.809489 | 1.845283e-50 | -8.615850e-47 |
| Msa0343720 | Msa0538450 | 0.815701 | 8.076485e-52 | -8.615850e-47 |
| Msa0343720 | Msa0538520 | 0.802410 | 5.683873e-49 | -8.615850e-47 |
| Msa0343720 | Msa0538530 | 0.802102 | 6.579534e-49 | -8.615850e-47 |
| Msa0343720 | Msa0543740 | 0.803753 | 2.999010e-49 | -8.615850e-47 |
| Msa0343720 | Msa0546750 | 0.809378 | 1.948877e-50 | -8.615850e-47 |
| Msa0343720 | Msa0546760 | 0.807022 | 6.190441e-50 | -8.615850e-47 |
| Msa0343720 | Msa0548820 | 0.803100 | 4.095290e-49 | -8.615850e-47 |
| Msa0343720 | Msa0549920 | 0.850170 | 2.018573e-60 | -8.615850e-47 |
| Msa0343720 | Msa0549930 | 0.834935 | 2.247054e-56 | -8.615850e-47 |
| Msa0343720 | Msa0554660 | 0.801657 | 8.120069e-49 | -8.615850e-47 |
| Msa0343720 | Msa0579530 | 0.862174 | 6.110233e-64 | -8.615850e-47 |
| Msa0343720 | Msa0589720 | 0.804068 | 2.579908e-49 | -8.615850e-47 |
| Msa0343720 | Msa0589740 | 0.810226 | 1.280613e-50 | -8.615850e-47 |
| Msa0343720 | Msa0594330 | 0.819394 | 1.188362e-52 | -8.615850e-47 |
| Msa0343720 | Msa0599600 | 0.817267 | 3.602471e-52 | -8.615850e-47 |
| Msa0343720 | Msa0603950 | 0.803891 | 2.807556e-49 | -8.615850e-47 |
| Msa0343720 | Msa0605400 | 0.814282 | 1.667920e-51 | -8.615850e-47 |
| Msa0343720 | Msa0605410 | 0.818944 | 1.504769e-52 | -8.615850e-47 |
| Msa0343720 | Msa0605470 | 0.849724 | 2.691252e-60 | -8.615850e-47 |
| Msa0343720 | Msa0639410 | 0.813315 | 2.724425e-51 | -8.615850e-47 |
| Msa0343720 | Msa0643840 | 0.840853 | 6.770180e-58 | -8.615850e-47 |
| Msa0343720 | Msa0645060 | 0.802832 | 4.651990e-49 | -8.615850e-47 |
| Msa0343720 | Msa0645150 | 0.823613 | 1.260813e-53 | -8.615850e-47 |
| Msa0343720 | Msa0646210 | 0.844609 | 6.798025e-59 | -8.615850e-47 |
| Msa0343720 | Msa0668210 | 0.803537 | 3.325030e-49 | -8.615850e-47 |
| Msa0343720 | Msa0668220 | 0.826100 | 3.265498e-54 | -8.615850e-47 |
| Msa0343720 | Msa0670260 | 0.814110 | 1.820451e-51 | -8.615850e-47 |
| Msa0343720 | Msa0670360 | 0.842277 | 2.852569e-58 | -8.615850e-47 |
| Msa0343720 | Msa0671490 | 0.838771 | 2.358695e-57 | -8.615850e-47 |
| Msa0343720 | Msa0676190 | 0.804346 | 2.257364e-49 | -8.615850e-47 |
| Msa0343720 | Msa0678620 | 0.834810 | 2.416094e-56 | -8.615850e-47 |
| Msa0343720 | Msa0682410 | 0.810173 | 1.314853e-50 | -8.615850e-47 |
| Msa0343720 | Msa0711240 | 0.814203 | 1.736721e-51 | -8.615850e-47 |
| Msa0343720 | Msa0727480 | 0.849701 | 2.730514e-60 | -8.615850e-47 |
| Msa0343720 | Msa0735130 | 0.840717 | 7.350701e-58 | -8.615850e-47 |
| Msa0343720 | Msa0735280 | 0.840314 | 9.370297e-58 | -8.615850e-47 |
| Msa0343720 | Msa0768670 | 0.843108 | 1.715588e-58 | -8.615850e-47 |
| Msa0343720 | Msa0768720 | 0.839471 | 1.553940e-57 | -8.615850e-47 |
| Msa0343720 | Msa0777070 | 0.827806 | 1.276767e-54 | -8.615850e-47 |
| Msa0343720 | Msa0777250 | 0.800190 | 1.618647e-48 | -8.615850e-47 |
| Msa0343720 | Msa0787860 | 0.819504 | 1.121548e-52 | -8.615850e-47 |
| Msa0343720 | Msa0814160 | 0.839899 | 1.202322e-57 | -8.615850e-47 |
| Msa0343720 | Msa0824860 | 0.816832 | 4.511920e-52 | -8.615850e-47 |
| Msa0343720 | Msa0854840 | 0.859101 | 5.220134e-63 | -8.615850e-47 |
| Msa0343720 | Msa0863840 | 0.818288 | 2.119173e-52 | -8.615850e-47 |
| Msa0343720 | Msa0863850 | 0.807039 | 6.141494e-50 | -8.615850e-47 |
| Msa0343720 | Msa0864160 | 0.823716 | 1.192621e-53 | -8.615850e-47 |
| Msa0343720 | Msa0868820 | 0.808312 | 3.295548e-50 | -8.615850e-47 |
| Msa0343720 | Msa0868870 | 0.801196 | 1.009074e-48 | -8.615850e-47 |
| Msa0343720 | Msa0883640 | 0.875588 | 2.738529e-68 | -8.615850e-47 |
| Msa0343720 | Msa0896920 | 0.801211 | 1.001939e-48 | -8.615850e-47 |
| Msa0343720 | Msa0902340 | 0.841529 | 4.495908e-58 | -8.615850e-47 |
| Msa0343720 | Msa0910830 | 0.885413 | 8.309112e-72 | -8.615850e-47 |
| Msa0343720 | Msa0932890 | 0.821470 | 3.970014e-53 | -8.615850e-47 |
| Msa0343720 | Msa0932930 | 0.813606 | 2.350391e-51 | -8.615850e-47 |
| Msa0343720 | Msa0933580 | 0.816786 | 4.620294e-52 | -8.615850e-47 |
| Msa0343720 | Msa0933590 | 0.849571 | 2.968141e-60 | -8.615850e-47 |
| Msa0343720 | Msa0933610 | 0.807597 | 4.676957e-50 | -8.615850e-47 |
| Msa0343720 | Msa0941120 | 0.815940 | 7.145514e-52 | -8.615850e-47 |
| Msa0343720 | Msa0960090 | 0.877355 | 6.717498e-69 | -8.615850e-47 |
| Msa0343720 | Msa0967820 | 0.825984 | 3.479299e-54 | -8.615850e-47 |
| Msa0343720 | Msa0985700 | 0.876645 | 1.183897e-68 | -8.615850e-47 |
| Msa0343720 | Msa0987640 | 0.831673 | 1.461280e-55 | -8.615850e-47 |
| Msa0343720 | Msa0993450 | 0.803538 | 3.323897e-49 | -8.615850e-47 |
| Msa0343720 | Msa1006170 | 0.836046 | 1.177167e-56 | -8.615850e-47 |
| Msa0343720 | Msa1020540 | 0.801271 | 9.740191e-49 | -8.615850e-47 |
| Msa0343720 | Msa1021620 | 0.828167 | 1.045144e-54 | -8.615850e-47 |
| Msa0343720 | Msa1024350 | 0.847195 | 1.348732e-59 | -8.615850e-47 |
| Msa0343720 | Msa1026050 | 0.843576 | 1.287082e-58 | -8.615850e-47 |
| Msa0343720 | Msa1046210 | 0.800870 | 1.176786e-48 | -8.615850e-47 |
| Msa0343720 | Msa1048350 | 0.813029 | 3.148221e-51 | -8.615850e-47 |
| Msa0343720 | Msa1060320 | 0.809443 | 1.887895e-50 | -8.615850e-47 |
| Msa0343720 | Msa1061670 | 0.841798 | 3.818879e-58 | -8.615850e-47 |
| Msa0343720 | Msa1064940 | 0.820474 | 6.729369e-53 | -8.615850e-47 |
| Msa0343720 | Msa1076830 | 0.809356 | 1.970750e-50 | -8.615850e-47 |
| Msa0343720 | Msa1081610 | 0.804238 | 2.377386e-49 | -8.615850e-47 |
| Msa0343720 | Msa1087370 | 0.802643 | 5.088842e-49 | -8.615850e-47 |
| Msa0343720 | Msa1087380 | 0.815788 | 7.726636e-52 | -8.615850e-47 |
| Msa0343720 | Msa1098100 | 0.802065 | 6.696428e-49 | -8.615850e-47 |
| Msa0343720 | Msa1104960 | 0.822420 | 2.391721e-53 | -8.615850e-47 |
| Msa0343720 | Msa1106960 | 0.835917 | 1.269196e-56 | -8.615850e-47 |
| Msa0343720 | Msa1109880 | 0.850451 | 1.683995e-60 | -8.615850e-47 |
| Msa0343720 | Msa1109890 | 0.873717 | 1.183936e-67 | -8.615850e-47 |
| Msa0343720 | Msa1133860 | 0.804086 | 2.557514e-49 | -8.615850e-47 |
| Msa0343720 | Msa1147030 | 0.820654 | 6.119536e-53 | -8.615850e-47 |
| Msa0343720 | Msa1149020 | 0.830055 | 3.642635e-55 | -8.615850e-47 |
| Msa0343720 | Msa1214960 | 0.807197 | 5.685213e-50 | -8.615850e-47 |
| Msa0343720 | Msa1216600 | 0.812077 | 5.081761e-51 | -8.615850e-47 |
| Msa0343720 | Msa1219780 | 0.806249 | 9.017069e-50 | -8.615850e-47 |
| Msa0343720 | Msa1266710 | 0.800304 | 1.534767e-48 | -8.615850e-47 |
| Msa0343720 | Msa1286420 | 0.843685 | 1.203950e-58 | -8.615850e-47 |
| Msa0343720 | Msa1296870 | 0.815538 | 8.783226e-52 | -8.615850e-47 |
| Msa0343720 | Msa1300610 | 0.837803 | 4.189236e-57 | -8.615850e-47 |
| Msa0343720 | Msa1321450 | 0.828841 | 7.184900e-55 | -8.615850e-47 |
| Msa0343720 | Msa1323030 | 0.848761 | 4.987831e-60 | -8.615850e-47 |
| Msa0343720 | Msa1323120 | 0.826243 | 3.018092e-54 | -8.615850e-47 |
| Msa0343720 | Msa1323160 | 0.835238 | 1.884701e-56 | -8.615850e-47 |
| Msa0343720 | Msa1329740 | 0.825619 | 4.245695e-54 | -8.615850e-47 |
| Msa0343720 | Msa1355330 | 0.826808 | 2.213540e-54 | -8.615850e-47 |
| Msa0343720 | Msa1355340 | 0.813583 | 2.377890e-51 | -8.615850e-47 |
| Msa0343720 | Msa1357490 | 0.818980 | 1.476378e-52 | -8.615850e-47 |
| Msa0343720 | Msa1373560 | 0.821707 | 3.498654e-53 | -8.615850e-47 |
| Msa0343720 | Msa1376070 | 0.815272 | 1.006706e-51 | -8.615850e-47 |
| Msa0343720 | Msa1377520 | 0.832185 | 1.092173e-55 | -8.615850e-47 |
| Msa0343720 | Msa1378400 | 0.810061 | 1.389928e-50 | -8.615850e-47 |
| Msa0343720 | Msa1393440 | 0.804261 | 2.352083e-49 | -8.615850e-47 |
| Msa0343720 | Msa1395150 | 0.813664 | 2.282457e-51 | -8.615850e-47 |
| Msa0343720 | Msa1407210 | 0.804894 | 1.735272e-49 | -8.615850e-47 |
| Msa0343720 | Msa1407670 | 0.808773 | 2.626855e-50 | -8.615850e-47 |
| Msa0343720 | Msa1411550 | 0.800478 | 1.414583e-48 | -8.615850e-47 |
| Msa0343720 | Msa1420020 | 0.803046 | 4.202269e-49 | -8.615850e-47 |
| Msa0343720 | Msa1421130 | 0.813448 | 2.547023e-51 | -8.615850e-47 |
| Msa0343720 | Msa1445900 | 0.803446 | 3.473390e-49 | -8.615850e-47 |
| Msa0343720 | Msa1449770 | 0.811294 | 7.521691e-51 | -8.615850e-47 |
| Msa0343720 | Msa1456600 | 0.821496 | 3.914089e-53 | -8.615850e-47 |
| Msa0343720 | Msa1459610 | 0.840702 | 7.416894e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343720 | MtrunA17_Chr5g0434311 | 97.165 | 388 | 9 | 1 | 1 | 386 | 1 | 388 | 0.0 | 770 |
| Msa0343720 | MtrunA17_Chr2g0291531 | 50.964 | 363 | 176 | 2 | 20 | 382 | 98 | 458 | 1.11e-137 | 400 |
| Msa0343720 | MtrunA17_Chr2g0291511 | 48.919 | 370 | 182 | 2 | 13 | 382 | 101 | 463 | 3.29e-133 | 389 |
| Msa0343720 | MtrunA17_Chr1g0156281 | 42.508 | 327 | 174 | 7 | 62 | 383 | 108 | 425 | 7.68e-89 | 275 |
| Msa0343720 | MtrunA17_Chr8g0348141 | 40.120 | 334 | 183 | 5 | 61 | 381 | 156 | 485 | 1.21e-86 | 271 |
| Msa0343720 | MtrunA17_Chr0c01g0489331 | 41.003 | 339 | 191 | 5 | 43 | 381 | 127 | 456 | 4.31e-85 | 266 |
| Msa0343720 | MtrunA17_Chr3g0142401 | 40.798 | 326 | 181 | 8 | 62 | 383 | 103 | 420 | 1.27e-84 | 263 |
| Msa0343720 | MtrunA17_Chr4g0051831 | 43.478 | 299 | 147 | 7 | 92 | 382 | 91 | 375 | 3.54e-71 | 227 |
| Msa0343720 | MtrunA17_Chr8g0367771 | 42.672 | 232 | 115 | 6 | 155 | 383 | 34 | 250 | 6.19e-61 | 197 |
| Msa0343720 | MtrunA17_Chr3g0113761 | 39.496 | 238 | 123 | 7 | 62 | 297 | 75 | 293 | 4.60e-50 | 171 |
| Msa0343720 | MtrunA17_Chr3g0113501 | 45.455 | 132 | 67 | 4 | 192 | 320 | 43 | 172 | 3.81e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343720 | AT3G05390.1 | 42.598 | 331 | 181 | 5 | 51 | 381 | 138 | 459 | 1.22e-91 | 283 |
| Msa0343720 | AT4G01240.1 | 41.477 | 352 | 186 | 8 | 43 | 381 | 310 | 654 | 8.81e-89 | 281 |
| Msa0343720 | AT5G40830.1 | 42.683 | 328 | 169 | 9 | 61 | 383 | 100 | 413 | 6.22e-84 | 262 |
| Msa0343720 | AT5G40830.2 | 42.683 | 328 | 169 | 9 | 61 | 383 | 100 | 413 | 6.22e-84 | 262 |
| Msa0343720 | AT3G27230.1 | 42.236 | 322 | 173 | 6 | 62 | 383 | 101 | 409 | 2.18e-81 | 255 |
| Msa0343720 | AT1G29790.2 | 41.096 | 292 | 150 | 7 | 92 | 381 | 104 | 375 | 7.65e-73 | 232 |
| Msa0343720 | AT1G29790.1 | 41.096 | 292 | 150 | 7 | 92 | 381 | 104 | 375 | 7.65e-73 | 232 |
| Msa0343720 | AT5G40830.3 | 37.615 | 327 | 149 | 5 | 60 | 383 | 99 | 373 | 3.20e-72 | 230 |
Find 123 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAATTGGAGAATGTTTA+TGG | 0.187015 | 3_1:-2162761 | Msa0343720:CDS |
| GGGATGGGCGATGGGAAATT+AGG | 0.270266 | 3_1:+2163337 | Msa0343710:intron |
| TTTGTTGTTTGATGTTTATA+GGG | 0.274446 | 3_1:-2162834 | Msa0343720:CDS |
| TTATGAGGTTTGTGAATAAA+AGG | 0.274720 | 3_1:+2163707 | Msa0343710:intron |
| AAGAAAGTTAAGTGGGTTAC+TGG | 0.275293 | 3_1:-2162713 | Msa0343720:CDS |
| TTAGACCTGGTGGGTTGTTT+TGG | 0.290537 | 3_1:-2162808 | Msa0343720:CDS |
| TGATAAGGGACCTCAATTTC+AGG | 0.291988 | 3_1:-2162681 | Msa0343720:CDS |
| AATGTACCTTTCTGCTTTGT+TGG | 0.311264 | 3_1:-2162657 | Msa0343720:CDS |
| AAATCTAGACCGTTTGATCT+AGG | 0.311564 | 3_1:+2163145 | Msa0343710:intron |
| GAAGCTATGAAGCTATTAAA+AGG | 0.313502 | 3_1:+2162980 | Msa0343710:intron |
| GTGGTGGTGGTTGTAAAATT+TGG | 0.315722 | 3_1:+2163643 | Msa0343710:intron |
| TCTCAAAGACTCCTACTAAA+AGG | 0.337748 | 3_1:-2163403 | Msa0343720:CDS |
| TCCCCTTCCCTTCCAGTCTC+TGG | 0.349654 | 3_1:-2163318 | Msa0343720:CDS |
| TGAAGAGTAAATTGGCGGTT+AGG | 0.360306 | 3_1:+2163737 | Msa0343710:intron |
| CGGCAACGGCGGCGAGGGAG+AGG | 0.371397 | 3_1:+2163373 | Msa0343710:intron |
| TGCGAAATACTCATGTATAA+AGG | 0.374905 | 3_1:+2162944 | Msa0343710:intron |
| GAGGTGGAGGCAAAGAATTC+CGG | 0.397834 | 3_1:+2163577 | Msa0343710:intron |
| GAGGGAAATGAAGAGTAAAT+TGG | 0.398464 | 3_1:+2163729 | Msa0343710:intron |
| GAAGGGAAGGGGATGGGCGA+TGG | 0.401095 | 3_1:+2163328 | Msa0343710:intron |
| GTCTTCAACGGCGGTGGCTG+TGG | 0.403735 | 3_1:+2163624 | Msa0343710:intron |
| CGGTGTCGGAGTTGAAGTTT+CGG | 0.405953 | 3_1:+2163527 | Msa0343710:intron |
| GAAGAGTAAATTGGCGGTTA+GGG | 0.415281 | 3_1:+2163738 | Msa0343710:intron |
| TAAACCGATTCGAACCGAAC+CGG | 0.422920 | 3_1:+2163090 | Msa0343710:intron |
| GTGCATGCGCTGCCGGCGGG+AGG | 0.428866 | 3_1:+2163499 | Msa0343710:intron |
| CCCTCGCCGCCGTTGCCGTC+CGG | 0.429922 | 3_1:-2163368 | Msa0343720:CDS |
| AACGGCGGTGGCTGTGGTGG+TGG | 0.430884 | 3_1:+2163630 | Msa0343710:intron |
| TGCATGCGCTGCCGGCGGGA+GGG | 0.436930 | 3_1:+2163500 | Msa0343710:intron |
| ATTCACCATGAATCCTTGAA+TGG | 0.436986 | 3_1:+2162629 | Msa0343710:intron |
| AACCCTACACTTTCAATCAT+AGG | 0.442677 | 3_1:+2162737 | Msa0343710:intron |
| AGCCTCTCTGTGTGCGGGAA+CGG | 0.450861 | 3_1:+2163227 | Msa0343710:intron |
| AGGGTGCATGCGCTGCCGGC+GGG | 0.455390 | 3_1:+2163496 | Msa0343710:intron |
| GATCCCCAACACAAAAGAAA+TGG | 0.457855 | 3_1:+2162780 | Msa0343710:intron |
| ACAACGTCGTTAAACTTAAA+CGG | 0.460143 | 3_1:-2163004 | Msa0343720:CDS |
| AGAAGCCATTCAAGGATTCA+TGG | 0.463717 | 3_1:-2162634 | Msa0343720:CDS |
| AAAGAGGGTGCATGCGCTGC+CGG | 0.465186 | 3_1:+2163492 | Msa0343710:intron |
| GGCGGGAGGGTGGACGGTGT+CGG | 0.467004 | 3_1:+2163513 | Msa0343710:intron |
| AATCTAGACCGTTTGATCTA+GGG | 0.468716 | 3_1:+2163146 | Msa0343710:intron |
| AGCGCTGTCTTCAACGGCGG+TGG | 0.470998 | 3_1:+2163618 | Msa0343710:intron |
| GACCTATGATTGAAAGTGTA+GGG | 0.472579 | 3_1:-2162739 | Msa0343720:CDS |
| CCGGACGGCAACGGCGGCGA+GGG | 0.472795 | 3_1:+2163368 | Msa0343710:intron |
| AGACTGGAAGGGAAGGGGAT+GGG | 0.474447 | 3_1:+2163322 | Msa0343710:intron |
| GTTCGAATCGGTTTAGACAT+AGG | 0.474512 | 3_1:-2163082 | Msa0343720:CDS |
| TACTGGGAAGAAGCTTGATA+AGG | 0.475551 | 3_1:-2162696 | Msa0343720:CDS |
| AGGTACATTTCCTGAAATTG+AGG | 0.476525 | 3_1:+2162671 | Msa0343710:intron |
| GCCGGACGGCAACGGCGGCG+AGG | 0.478129 | 3_1:+2163367 | Msa0343710:intron |
| CCACACGACGGAGGAATTTG+AGG | 0.481995 | 3_1:+2163288 | Msa0343710:intron |
| TTTGTTGGAGAAGCCATTCA+AGG | 0.482535 | 3_1:-2162642 | Msa0343720:CDS |
| TAGGGTTTAAGAAAGTTAAG+TGG | 0.485340 | 3_1:-2162721 | Msa0343720:CDS |
| AAACCCGGTTCGGTTCGAAT+CGG | 0.488469 | 3_1:-2163094 | Msa0343720:CDS |
| TTGATCTAGGGTTTGTCCAA+CGG | 0.488488 | 3_1:+2163158 | Msa0343710:intron |
| TGAGAGAGAATCTCGTCGTC+TGG | 0.489539 | 3_1:+2163421 | Msa0343710:intron |
| ACTGGGAAGAAGCTTGATAA+GGG | 0.494358 | 3_1:-2162695 | Msa0343720:CDS |
| AAACCGATTCGAACCGAACC+GGG | 0.494960 | 3_1:+2163091 | Msa0343710:intron |
| TTGGTGTACAAGTGGAGGAA+TGG | 0.497681 | 3_1:+2163662 | Msa0343710:intron |
| GTGGTGCTGCCGGACGGCAA+CGG | 0.499920 | 3_1:+2163359 | Msa0343710:intron |
| TGCGGATATCGTCGGGAAAG+AGG | 0.501843 | 3_1:+2163476 | Msa0343710:intron |
| AGAAACACGTAAACCCGGTT+CGG | 0.502080 | 3_1:-2163104 | Msa0343720:CDS |
| GCTGCCGGCGGGAGGGTGGA+CGG | 0.510419 | 3_1:+2163507 | Msa0343710:intron |
| GAGACTGGAAGGGAAGGGGA+TGG | 0.511438 | 3_1:+2163321 | Msa0343710:intron |
| ATGAAGCTGCGGATATCGTC+GGG | 0.512073 | 3_1:+2163469 | Msa0343710:intron |
| ATCGAAGCCTCTCTGTGTGC+GGG | 0.515555 | 3_1:+2163222 | Msa0343710:intron |
| TTCAACGGCGGTGGCTGTGG+TGG | 0.515739 | 3_1:+2163627 | Msa0343710:intron |
| AAGGGAAGGGGATGGGCGAT+GGG | 0.517670 | 3_1:+2163329 | Msa0343710:intron |
| TATAGGGTTCTTAGACCTGG+TGG | 0.518659 | 3_1:-2162818 | Msa0343720:CDS |
| GTTTATAGGGTTCTTAGACC+TGG | 0.523866 | 3_1:-2162821 | Msa0343720:CDS |
| ATAGGGTTCTTAGACCTGGT+GGG | 0.524499 | 3_1:-2162817 | Msa0343720:CDS |
| GACCAGAGACTGGAAGGGAA+GGG | 0.527483 | 3_1:+2163316 | Msa0343710:intron |
| AGGAAAGAAAGAGTGTTATG+AGG | 0.530138 | 3_1:+2163692 | Msa0343710:intron |
| AGAAAGTTAAGTGGGTTACT+GGG | 0.530570 | 3_1:-2162712 | Msa0343720:CDS |
| GAGGGTGCATGCGCTGCCGG+CGG | 0.531697 | 3_1:+2163495 | Msa0343710:intron |
| ACAAGTGGAGGAATGGTAAG+TGG | 0.533615 | 3_1:+2163669 | Msa0343710:intron |
| AGGGTTTAAGAAAGTTAAGT+GGG | 0.534205 | 3_1:-2162720 | Msa0343720:CDS |
| GCCAGCGCTGTCTTCAACGG+CGG | 0.535578 | 3_1:+2163615 | Msa0343710:intron |
| GGGAAATTAGGTGGTGCTGC+CGG | 0.535730 | 3_1:+2163349 | Msa0343710:intron |
| ACCAGAGACTGGAAGGGAAG+GGG | 0.537057 | 3_1:+2163317 | Msa0343710:intron |
| GGTGTAGACCAGAGACTGGA+AGG | 0.545576 | 3_1:+2163310 | Msa0343710:intron |
| TGGTGGAGTAGCAACTTTCG+CGG | 0.547029 | 3_1:-2163059 | Msa0343720:CDS |
| TGTAAAATTTGGTGTACAAG+TGG | 0.547597 | 3_1:+2163654 | Msa0343710:intron |
| TGGACAAACCCTAGATCAAA+CGG | 0.551753 | 3_1:-2163154 | Msa0343720:CDS |
| GAGGTTTGTGAATAAAAGGA+GGG | 0.554209 | 3_1:+2163711 | Msa0343710:intron |
| CATGAAGCTGCGGATATCGT+CGG | 0.555173 | 3_1:+2163468 | Msa0343710:intron |
| GCGGATATCGTCGGGAAAGA+GGG | 0.558600 | 3_1:+2163477 | Msa0343710:intron |
| GTCGCCAGCGCTGTCTTCAA+CGG | 0.559058 | 3_1:+2163612 | Msa0343710:intron |
| TGAGGTTTGTGAATAAAAGG+AGG | 0.564210 | 3_1:+2163710 | Msa0343710:intron |
| ATCGGTTTAGACATAGGTGG+TGG | 0.566020 | 3_1:-2163076 | Msa0343720:CDS |
| CATCGAAGCCTCTCTGTGTG+CGG | 0.567625 | 3_1:+2163221 | Msa0343710:intron |
| AAAATTTGGTGTACAAGTGG+AGG | 0.570105 | 3_1:+2163657 | Msa0343710:intron |
| GGACCTATGATTGAAAGTGT+AGG | 0.571785 | 3_1:-2162740 | Msa0343720:CDS |
| ATGCGCTGCCGGCGGGAGGG+TGG | 0.573167 | 3_1:+2163503 | Msa0343710:intron |
| TTGTCCAACGGTGCTTCTCG+CGG | 0.575905 | 3_1:+2163170 | Msa0343710:intron |
| ACGGCCGCGAGAAGCACCGT+TGG | 0.579438 | 3_1:-2163174 | Msa0343720:CDS |
| TGAGGGTGTAGACCAGAGAC+TGG | 0.583150 | 3_1:+2163306 | Msa0343710:intron |
| AAGTTTCGGTTGAAACCTAG+TGG | 0.586759 | 3_1:+2163541 | Msa0343710:intron |
| AATTAGGTGGTGCTGCCGGA+CGG | 0.588099 | 3_1:+2163353 | Msa0343710:intron |
| AGACCAGAGACTGGAAGGGA+AGG | 0.594271 | 3_1:+2163315 | Msa0343710:intron |
| ACCGCCGTTGAAGACAGCGC+TGG | 0.594417 | 3_1:-2163616 | Msa0343720:CDS |
| ATGGGCGATGGGAAATTAGG+TGG | 0.595658 | 3_1:+2163340 | Msa0343710:intron |
| ACATGATCCGTTCACGTCGT+AGG | 0.599038 | 3_1:+2163444 | Msa0343710:intron |
| ATAGCTTCATAGCTTCAAGA+GGG | 0.600391 | 3_1:-2162973 | Msa0343720:CDS |
| CCTCAAATTCCTCCGTCGTG+TGG | 0.601922 | 3_1:-2163288 | Msa0343720:CDS |
| AATAGCTTCATAGCTTCAAG+AGG | 0.604135 | 3_1:-2162974 | Msa0343720:CDS |
| GACACCGTCCACCCTCCCGC+CGG | 0.604663 | 3_1:-2163511 | Msa0343720:CDS |
| GTGGAGGCAAAGAATTCCGG+TGG | 0.608664 | 3_1:+2163580 | Msa0343710:intron |
| TTCATGTCCTACGACGTGAA+CGG | 0.613712 | 3_1:-2163451 | Msa0343720:CDS |
| TATACATGAGTATTTCGCAA+CGG | 0.616135 | 3_1:-2162940 | Msa0343720:CDS |
| GTGCTGCCGGACGGCAACGG+CGG | 0.616600 | 3_1:+2163362 | Msa0343710:intron |
| GCTTCTCCAACAAAGCAGAA+AGG | 0.617751 | 3_1:+2162651 | Msa0343710:intron |
| GTGTAGACCAGAGACTGGAA+GGG | 0.619328 | 3_1:+2163311 | Msa0343710:intron |
| GGAAATGAAGAGTAAATTGG+CGG | 0.625883 | 3_1:+2163732 | Msa0343710:intron |
| CACACGACGGAGGAATTTGA+GGG | 0.627361 | 3_1:+2163289 | Msa0343710:intron |
| TCCAACCAAAACAACCCACC+AGG | 0.633677 | 3_1:+2162803 | Msa0343710:intron |
| AGTTTCGGTTGAAACCTAGT+GGG | 0.640219 | 3_1:+2163542 | Msa0343710:intron |
| AGTGGAGGAATGGTAAGTGG+AGG | 0.642457 | 3_1:+2163672 | Msa0343710:intron |
| CGAATCGGTTTAGACATAGG+TGG | 0.657680 | 3_1:-2163079 | Msa0343720:CDS |
| TGGCGACAGTAACCTCCCAC+CGG | 0.659388 | 3_1:-2163596 | Msa0343720:CDS |
| TAGCTTCATAGCTTCAAGAG+GGG | 0.664954 | 3_1:-2162972 | Msa0343720:CDS |
| ACGGTCAATGAGACACGTGT+AGG | 0.665828 | 3_1:+2163246 | Msa0343710:intron |
| GACCGTTCCCGCACACAGAG+AGG | 0.674609 | 3_1:-2163229 | Msa0343720:CDS |
| AGGCAAAGAATTCCGGTGGG+AGG | 0.675859 | 3_1:+2163584 | Msa0343710:intron |
| CGTCGTAGGACATGAAGCTG+CGG | 0.691105 | 3_1:+2163458 | Msa0343710:intron |
| TGGAGGCAAAGAATTCCGGT+GGG | 0.719672 | 3_1:+2163581 | Msa0343710:intron |
| GTAAGCAGTCCACACGACGG+AGG | 0.721896 | 3_1:+2163279 | Msa0343710:intron |
| TGTGTAAGCAGTCCACACGA+CGG | 0.759753 | 3_1:+2163276 | Msa0343710:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTGTTTGATGTTTAT+AGG | - | chr3_1:2163565-2163584 | Msa0343720:CDS | 20.0% |
| !!! | TTTGTTGTTTGATGTTTATA+GGG | - | chr3_1:2163566-2163585 | Msa0343720:CDS | 20.0% |
| !!! | TTTTGTTGTTTGATGTTTAT+AGG | - | chr3_1:2163565-2163584 | Msa0343720:CDS | 20.0% |
| !!! | TTTGTTGTTTGATGTTTATA+GGG | - | chr3_1:2163566-2163585 | Msa0343720:CDS | 20.0% |
| ! | TTATGAGGTTTGTGAATAAA+AGG | + | chr3_1:2162696-2162715 | Msa0343710:intron | 25.0% |
| !! | TCCAAAGTGTTATCAAAAAA+CGG | + | chr3_1:2163489-2163508 | Msa0343710:intron | 25.0% |
| ! | AAAAAAAGAAGCAATGTTTC+GGG | + | chr3_1:2163549-2163568 | Msa0343710:intron | 25.0% |
| ! | CAAAAAAAGAAGCAATGTTT+CGG | + | chr3_1:2163550-2163569 | Msa0343710:intron | 25.0% |
| ! | TTATGAGGTTTGTGAATAAA+AGG | + | chr3_1:2162696-2162715 | Msa0343710:intron | 25.0% |
| !! | TCCAAAGTGTTATCAAAAAA+CGG | + | chr3_1:2163489-2163508 | Msa0343710:intron | 25.0% |
| ! | AAAAAAAGAAGCAATGTTTC+GGG | + | chr3_1:2163549-2163568 | Msa0343710:intron | 25.0% |
| ! | CAAAAAAAGAAGCAATGTTT+CGG | + | chr3_1:2163550-2163569 | Msa0343710:intron | 25.0% |
| !! | TGTAAAATTTGGTGTACAAG+TGG | + | chr3_1:2162749-2162768 | Msa0343710:intron | 30.0% |
| !!! | AAAGACTGTTTTGATCTCAA+CGG | - | chr3_1:2163207-2163226 | Msa0343720:CDS | 30.0% |
| ACAACGTCGTTAAACTTAAA+CGG | - | chr3_1:2163396-2163415 | Msa0343720:CDS | 30.0% | |
| GAAGCTATGAAGCTATTAAA+AGG | + | chr3_1:2163423-2163442 | Msa0343710:intron | 30.0% | |
| TGCGAAATACTCATGTATAA+AGG | + | chr3_1:2163459-2163478 | Msa0343710:intron | 30.0% | |
| TATACATGAGTATTTCGCAA+CGG | - | chr3_1:2163460-2163479 | Msa0343720:CDS | 30.0% | |
| !!! | TCCGTTTTTTGATAACACTT+TGG | - | chr3_1:2163485-2163504 | Msa0343720:CDS | 30.0% |
| !! | CAATGCATGTTTTGAGTAAT+TGG | - | chr3_1:2163520-2163539 | Msa0343720:CDS | 30.0% |
| GATCAATTGGAGAATGTTTA+TGG | - | chr3_1:2163639-2163658 | Msa0343720:CDS | 30.0% | |
| TAGGGTTTAAGAAAGTTAAG+TGG | - | chr3_1:2163679-2163698 | Msa0343720:CDS | 30.0% | |
| AGGGTTTAAGAAAGTTAAGT+GGG | - | chr3_1:2163680-2163699 | Msa0343720:CDS | 30.0% | |
| !! | TGTAAAATTTGGTGTACAAG+TGG | + | chr3_1:2162749-2162768 | Msa0343710:intron | 30.0% |
| !!! | AAAGACTGTTTTGATCTCAA+CGG | - | chr3_1:2163207-2163226 | Msa0343720:CDS | 30.0% |
| ACAACGTCGTTAAACTTAAA+CGG | - | chr3_1:2163396-2163415 | Msa0343720:CDS | 30.0% | |
| GAAGCTATGAAGCTATTAAA+AGG | + | chr3_1:2163423-2163442 | Msa0343710:intron | 30.0% | |
| TGCGAAATACTCATGTATAA+AGG | + | chr3_1:2163459-2163478 | Msa0343710:intron | 30.0% | |
| TATACATGAGTATTTCGCAA+CGG | - | chr3_1:2163460-2163479 | Msa0343720:CDS | 30.0% | |
| !!! | TCCGTTTTTTGATAACACTT+TGG | - | chr3_1:2163485-2163504 | Msa0343720:CDS | 30.0% |
| !! | CAATGCATGTTTTGAGTAAT+TGG | - | chr3_1:2163520-2163539 | Msa0343720:CDS | 30.0% |
| GATCAATTGGAGAATGTTTA+TGG | - | chr3_1:2163639-2163658 | Msa0343720:CDS | 30.0% | |
| TAGGGTTTAAGAAAGTTAAG+TGG | - | chr3_1:2163679-2163698 | Msa0343720:CDS | 30.0% | |
| AGGGTTTAAGAAAGTTAAGT+GGG | - | chr3_1:2163680-2163699 | Msa0343720:CDS | 30.0% | |
| GGAAATGAAGAGTAAATTGG+CGG | + | chr3_1:2162671-2162690 | Msa0343710:intron | 35.0% | |
| GAGGGAAATGAAGAGTAAAT+TGG | + | chr3_1:2162674-2162693 | Msa0343710:intron | 35.0% | |
| GAGGTTTGTGAATAAAAGGA+GGG | + | chr3_1:2162692-2162711 | Msa0343710:intron | 35.0% | |
| TGAGGTTTGTGAATAAAAGG+AGG | + | chr3_1:2162693-2162712 | Msa0343710:intron | 35.0% | |
| !! | AGGAAAGAAAGAGTGTTATG+AGG | + | chr3_1:2162711-2162730 | Msa0343710:intron | 35.0% |
| !! | AAAATTTGGTGTACAAGTGG+AGG | + | chr3_1:2162746-2162765 | Msa0343710:intron | 35.0% |
| TCTCAAAGACTCCTACTAAA+AGG | - | chr3_1:2162997-2163016 | Msa0343720:CDS | 35.0% | |
| AATCTAGACCGTTTGATCTA+GGG | + | chr3_1:2163257-2163276 | Msa0343710:intron | 35.0% | |
| AAATCTAGACCGTTTGATCT+AGG | + | chr3_1:2163258-2163277 | Msa0343710:intron | 35.0% | |
| !!! | GTTTTAGAAACACGTAAACC+CGG | - | chr3_1:2163291-2163310 | Msa0343720:CDS | 35.0% |
| AATAGCTTCATAGCTTCAAG+AGG | - | chr3_1:2163426-2163445 | Msa0343720:CDS | 35.0% | |
| ATAGCTTCATAGCTTCAAGA+GGG | - | chr3_1:2163427-2163446 | Msa0343720:CDS | 35.0% | |
| ! | TTGGACCATTTCTTTTGTGT+TGG | - | chr3_1:2163615-2163634 | Msa0343720:CDS | 35.0% |
| ! | TGGACCATTTCTTTTGTGTT+GGG | - | chr3_1:2163616-2163635 | Msa0343720:CDS | 35.0% |
| ! | GACCTATGATTGAAAGTGTA+GGG | - | chr3_1:2163661-2163680 | Msa0343720:CDS | 35.0% |
| AACCCTACACTTTCAATCAT+AGG | + | chr3_1:2163666-2163685 | Msa0343710:intron | 35.0% | |
| !! | AAGAAAGTTAAGTGGGTTAC+TGG | - | chr3_1:2163687-2163706 | Msa0343720:CDS | 35.0% |
| !! | AGAAAGTTAAGTGGGTTACT+GGG | - | chr3_1:2163688-2163707 | Msa0343720:CDS | 35.0% |
| AGGTACATTTCCTGAAATTG+AGG | + | chr3_1:2163732-2163751 | Msa0343710:intron | 35.0% | |
| AATGTACCTTTCTGCTTTGT+TGG | - | chr3_1:2163743-2163762 | Msa0343720:CDS | 35.0% | |
| GGAAATGAAGAGTAAATTGG+CGG | + | chr3_1:2162671-2162690 | Msa0343710:intron | 35.0% | |
| GAGGGAAATGAAGAGTAAAT+TGG | + | chr3_1:2162674-2162693 | Msa0343710:intron | 35.0% | |
| GAGGTTTGTGAATAAAAGGA+GGG | + | chr3_1:2162692-2162711 | Msa0343710:intron | 35.0% | |
| TGAGGTTTGTGAATAAAAGG+AGG | + | chr3_1:2162693-2162712 | Msa0343710:intron | 35.0% | |
| !! | AGGAAAGAAAGAGTGTTATG+AGG | + | chr3_1:2162711-2162730 | Msa0343710:intron | 35.0% |
| !! | AAAATTTGGTGTACAAGTGG+AGG | + | chr3_1:2162746-2162765 | Msa0343710:intron | 35.0% |
| TCTCAAAGACTCCTACTAAA+AGG | - | chr3_1:2162997-2163016 | Msa0343720:CDS | 35.0% | |
| AATCTAGACCGTTTGATCTA+GGG | + | chr3_1:2163257-2163276 | Msa0343710:intron | 35.0% | |
| AAATCTAGACCGTTTGATCT+AGG | + | chr3_1:2163258-2163277 | Msa0343710:intron | 35.0% | |
| !!! | GTTTTAGAAACACGTAAACC+CGG | - | chr3_1:2163291-2163310 | Msa0343720:CDS | 35.0% |
| AATAGCTTCATAGCTTCAAG+AGG | - | chr3_1:2163426-2163445 | Msa0343720:CDS | 35.0% | |
| ATAGCTTCATAGCTTCAAGA+GGG | - | chr3_1:2163427-2163446 | Msa0343720:CDS | 35.0% | |
| ! | TTGGACCATTTCTTTTGTGT+TGG | - | chr3_1:2163615-2163634 | Msa0343720:CDS | 35.0% |
| ! | TGGACCATTTCTTTTGTGTT+GGG | - | chr3_1:2163616-2163635 | Msa0343720:CDS | 35.0% |
| ! | GACCTATGATTGAAAGTGTA+GGG | - | chr3_1:2163661-2163680 | Msa0343720:CDS | 35.0% |
| AACCCTACACTTTCAATCAT+AGG | + | chr3_1:2163666-2163685 | Msa0343710:intron | 35.0% | |
| !! | AAGAAAGTTAAGTGGGTTAC+TGG | - | chr3_1:2163687-2163706 | Msa0343720:CDS | 35.0% |
| !! | AGAAAGTTAAGTGGGTTACT+GGG | - | chr3_1:2163688-2163707 | Msa0343720:CDS | 35.0% |
| AGGTACATTTCCTGAAATTG+AGG | + | chr3_1:2163732-2163751 | Msa0343710:intron | 35.0% | |
| AATGTACCTTTCTGCTTTGT+TGG | - | chr3_1:2163743-2163762 | Msa0343720:CDS | 35.0% | |
| !! | CGGTTAGGGTTTTTGGATTA+GGG | + | chr3_1:2162651-2162670 | Msa0343710:intron | 40.0% |
| ! | AAATTGGCGGTTAGGGTTTT+TGG | + | chr3_1:2162658-2162677 | Msa0343710:intron | 40.0% |
| GAAGAGTAAATTGGCGGTTA+GGG | + | chr3_1:2162665-2162684 | Msa0343710:intron | 40.0% | |
| TGAAGAGTAAATTGGCGGTT+AGG | + | chr3_1:2162666-2162685 | Msa0343710:intron | 40.0% | |
| !! | GTGGTGGTGGTTGTAAAATT+TGG | + | chr3_1:2162760-2162779 | Msa0343710:intron | 40.0% |
| ! | AAACCTAGTGGGAGTTTTTG+TGG | + | chr3_1:2162850-2162869 | Msa0343710:intron | 40.0% |
| AGTTTCGGTTGAAACCTAGT+GGG | + | chr3_1:2162861-2162880 | Msa0343710:intron | 40.0% | |
| AAGTTTCGGTTGAAACCTAG+TGG | + | chr3_1:2162862-2162881 | Msa0343710:intron | 40.0% | |
| ! | TTGATCTAGGGTTTGTCCAA+CGG | + | chr3_1:2163245-2163264 | Msa0343710:intron | 40.0% |
| TGGACAAACCCTAGATCAAA+CGG | - | chr3_1:2163246-2163265 | Msa0343720:CDS | 40.0% | |
| ! | GTTCGAATCGGTTTAGACAT+AGG | - | chr3_1:2163318-2163337 | Msa0343720:CDS | 40.0% |
| TAGCTTCATAGCTTCAAGAG+GGG | - | chr3_1:2163428-2163447 | Msa0343720:CDS | 40.0% | |
| GTTTATAGGGTTCTTAGACC+TGG | - | chr3_1:2163579-2163598 | Msa0343720:CDS | 40.0% | |
| ! | GGACCATTTCTTTTGTGTTG+GGG | - | chr3_1:2163617-2163636 | Msa0343720:CDS | 40.0% |
| GATCCCCAACACAAAAGAAA+TGG | + | chr3_1:2163623-2163642 | Msa0343710:intron | 40.0% | |
| ! | CTTTTGTGTTGGGGATCAAT+TGG | - | chr3_1:2163626-2163645 | Msa0343720:CDS | 40.0% |
| ! | GGACCTATGATTGAAAGTGT+AGG | - | chr3_1:2163660-2163679 | Msa0343720:CDS | 40.0% |
| TACTGGGAAGAAGCTTGATA+AGG | - | chr3_1:2163704-2163723 | Msa0343720:CDS | 40.0% | |
| ACTGGGAAGAAGCTTGATAA+GGG | - | chr3_1:2163705-2163724 | Msa0343720:CDS | 40.0% | |
| TGATAAGGGACCTCAATTTC+AGG | - | chr3_1:2163719-2163738 | Msa0343720:CDS | 40.0% | |
| TTTGTTGGAGAAGCCATTCA+AGG | - | chr3_1:2163758-2163777 | Msa0343720:CDS | 40.0% | |
| AGAAGCCATTCAAGGATTCA+TGG | - | chr3_1:2163766-2163785 | Msa0343720:CDS | 40.0% | |
| !! | CGGTTAGGGTTTTTGGATTA+GGG | + | chr3_1:2162651-2162670 | Msa0343710:intron | 40.0% |
| ! | AAATTGGCGGTTAGGGTTTT+TGG | + | chr3_1:2162658-2162677 | Msa0343710:intron | 40.0% |
| GAAGAGTAAATTGGCGGTTA+GGG | + | chr3_1:2162665-2162684 | Msa0343710:intron | 40.0% | |
| TGAAGAGTAAATTGGCGGTT+AGG | + | chr3_1:2162666-2162685 | Msa0343710:intron | 40.0% | |
| !! | GTGGTGGTGGTTGTAAAATT+TGG | + | chr3_1:2162760-2162779 | Msa0343710:intron | 40.0% |
| ! | AAACCTAGTGGGAGTTTTTG+TGG | + | chr3_1:2162850-2162869 | Msa0343710:intron | 40.0% |
| AGTTTCGGTTGAAACCTAGT+GGG | + | chr3_1:2162861-2162880 | Msa0343710:intron | 40.0% | |
| AAGTTTCGGTTGAAACCTAG+TGG | + | chr3_1:2162862-2162881 | Msa0343710:intron | 40.0% | |
| ! | TTGATCTAGGGTTTGTCCAA+CGG | + | chr3_1:2163245-2163264 | Msa0343710:intron | 40.0% |
| TGGACAAACCCTAGATCAAA+CGG | - | chr3_1:2163246-2163265 | Msa0343720:CDS | 40.0% | |
| ! | GTTCGAATCGGTTTAGACAT+AGG | - | chr3_1:2163318-2163337 | Msa0343720:CDS | 40.0% |
| TAGCTTCATAGCTTCAAGAG+GGG | - | chr3_1:2163428-2163447 | Msa0343720:CDS | 40.0% | |
| GTTTATAGGGTTCTTAGACC+TGG | - | chr3_1:2163579-2163598 | Msa0343720:CDS | 40.0% | |
| ! | GGACCATTTCTTTTGTGTTG+GGG | - | chr3_1:2163617-2163636 | Msa0343720:CDS | 40.0% |
| GATCCCCAACACAAAAGAAA+TGG | + | chr3_1:2163623-2163642 | Msa0343710:intron | 40.0% | |
| ! | CTTTTGTGTTGGGGATCAAT+TGG | - | chr3_1:2163626-2163645 | Msa0343720:CDS | 40.0% |
| ! | GGACCTATGATTGAAAGTGT+AGG | - | chr3_1:2163660-2163679 | Msa0343720:CDS | 40.0% |
| TACTGGGAAGAAGCTTGATA+AGG | - | chr3_1:2163704-2163723 | Msa0343720:CDS | 40.0% | |
| ACTGGGAAGAAGCTTGATAA+GGG | - | chr3_1:2163705-2163724 | Msa0343720:CDS | 40.0% | |
| TGATAAGGGACCTCAATTTC+AGG | - | chr3_1:2163719-2163738 | Msa0343720:CDS | 40.0% | |
| TTTGTTGGAGAAGCCATTCA+AGG | - | chr3_1:2163758-2163777 | Msa0343720:CDS | 40.0% | |
| AGAAGCCATTCAAGGATTCA+TGG | - | chr3_1:2163766-2163785 | Msa0343720:CDS | 40.0% | |
| !! | GCGGTTAGGGTTTTTGGATT+AGG | + | chr3_1:2162652-2162671 | Msa0343710:intron | 45.0% |
| ACAAGTGGAGGAATGGTAAG+TGG | + | chr3_1:2162734-2162753 | Msa0343710:intron | 45.0% | |
| TTGGTGTACAAGTGGAGGAA+TGG | + | chr3_1:2162741-2162760 | Msa0343710:intron | 45.0% | |
| ! | TAGTGGGAGTTTTTGTGGTG+AGG | + | chr3_1:2162845-2162864 | Msa0343710:intron | 45.0% |
| TCACCACAAAAACTCCCACT+AGG | - | chr3_1:2162844-2162863 | Msa0343720:CDS | 45.0% | |
| TTCATGTCCTACGACGTGAA+CGG | - | chr3_1:2162949-2162968 | Msa0343720:CDS | 45.0% | |
| AGAAACACGTAAACCCGGTT+CGG | - | chr3_1:2163296-2163315 | Msa0343720:CDS | 45.0% | |
| !! | TAAACCGATTCGAACCGAAC+CGG | + | chr3_1:2163313-2163332 | Msa0343710:intron | 45.0% |
| ! | CGAATCGGTTTAGACATAGG+TGG | - | chr3_1:2163321-2163340 | Msa0343720:CDS | 45.0% |
| ! | ATCGGTTTAGACATAGGTGG+TGG | - | chr3_1:2163324-2163343 | Msa0343720:CDS | 45.0% |
| TATAGGGTTCTTAGACCTGG+TGG | - | chr3_1:2163582-2163601 | Msa0343720:CDS | 45.0% | |
| ATAGGGTTCTTAGACCTGGT+GGG | - | chr3_1:2163583-2163602 | Msa0343720:CDS | 45.0% | |
| !!! | TTAGACCTGGTGGGTTGTTT+TGG | - | chr3_1:2163592-2163611 | Msa0343720:CDS | 45.0% |
| GCTTCTCCAACAAAGCAGAA+AGG | + | chr3_1:2163752-2163771 | Msa0343710:intron | 45.0% | |
| !! | GCGGTTAGGGTTTTTGGATT+AGG | + | chr3_1:2162652-2162671 | Msa0343710:intron | 45.0% |
| ACAAGTGGAGGAATGGTAAG+TGG | + | chr3_1:2162734-2162753 | Msa0343710:intron | 45.0% | |
| TTGGTGTACAAGTGGAGGAA+TGG | + | chr3_1:2162741-2162760 | Msa0343710:intron | 45.0% | |
| ! | TAGTGGGAGTTTTTGTGGTG+AGG | + | chr3_1:2162845-2162864 | Msa0343710:intron | 45.0% |
| TCACCACAAAAACTCCCACT+AGG | - | chr3_1:2162844-2162863 | Msa0343720:CDS | 45.0% | |
| TTCATGTCCTACGACGTGAA+CGG | - | chr3_1:2162949-2162968 | Msa0343720:CDS | 45.0% | |
| AGAAACACGTAAACCCGGTT+CGG | - | chr3_1:2163296-2163315 | Msa0343720:CDS | 45.0% | |
| !! | TAAACCGATTCGAACCGAAC+CGG | + | chr3_1:2163313-2163332 | Msa0343710:intron | 45.0% |
| ! | CGAATCGGTTTAGACATAGG+TGG | - | chr3_1:2163321-2163340 | Msa0343720:CDS | 45.0% |
| ! | ATCGGTTTAGACATAGGTGG+TGG | - | chr3_1:2163324-2163343 | Msa0343720:CDS | 45.0% |
| TATAGGGTTCTTAGACCTGG+TGG | - | chr3_1:2163582-2163601 | Msa0343720:CDS | 45.0% | |
| ATAGGGTTCTTAGACCTGGT+GGG | - | chr3_1:2163583-2163602 | Msa0343720:CDS | 45.0% | |
| !!! | TTAGACCTGGTGGGTTGTTT+TGG | - | chr3_1:2163592-2163611 | Msa0343720:CDS | 45.0% |
| GCTTCTCCAACAAAGCAGAA+AGG | + | chr3_1:2163752-2163771 | Msa0343710:intron | 45.0% | |
| AGTGGAGGAATGGTAAGTGG+AGG | + | chr3_1:2162731-2162750 | Msa0343710:intron | 50.0% | |
| TGGAGGCAAAGAATTCCGGT+GGG | + | chr3_1:2162822-2162841 | Msa0343710:intron | 50.0% | |
| GAGGTGGAGGCAAAGAATTC+CGG | + | chr3_1:2162826-2162845 | Msa0343710:intron | 50.0% | |
| ! | GAGTTTTTGTGGTGAGGTGG+AGG | + | chr3_1:2162839-2162858 | Msa0343710:intron | 50.0% |
| ! | TGGGAGTTTTTGTGGTGAGG+TGG | + | chr3_1:2162842-2162861 | Msa0343710:intron | 50.0% |
| ! | CGGTGTCGGAGTTGAAGTTT+CGG | + | chr3_1:2162876-2162895 | Msa0343710:intron | 50.0% |
| ATGAAGCTGCGGATATCGTC+GGG | + | chr3_1:2162934-2162953 | Msa0343710:intron | 50.0% | |
| CATGAAGCTGCGGATATCGT+CGG | + | chr3_1:2162935-2162954 | Msa0343710:intron | 50.0% | |
| ACATGATCCGTTCACGTCGT+AGG | + | chr3_1:2162959-2162978 | Msa0343710:intron | 50.0% | |
| TGAGAGAGAATCTCGTCGTC+TGG | + | chr3_1:2162982-2163001 | Msa0343710:intron | 50.0% | |
| ! | GAGGCTCACAGCCTTTTAGT+AGG | + | chr3_1:2163011-2163030 | Msa0343710:intron | 50.0% |
| ATGGGCGATGGGAAATTAGG+TGG | + | chr3_1:2163063-2163082 | Msa0343710:intron | 50.0% | |
| GTGTAGACCAGAGACTGGAA+GGG | + | chr3_1:2163092-2163111 | Msa0343710:intron | 50.0% | |
| CACACGACGGAGGAATTTGA+GGG | + | chr3_1:2163114-2163133 | Msa0343710:intron | 50.0% | |
| TGTGTAAGCAGTCCACACGA+CGG | + | chr3_1:2163127-2163146 | Msa0343710:intron | 50.0% | |
| ACGGTCAATGAGACACGTGT+AGG | + | chr3_1:2163157-2163176 | Msa0343710:intron | 50.0% | |
| !! | AAACCCGGTTCGGTTCGAAT+CGG | - | chr3_1:2163306-2163325 | Msa0343720:CDS | 50.0% |
| !! | AAACCGATTCGAACCGAACC+GGG | + | chr3_1:2163312-2163331 | Msa0343710:intron | 50.0% |
| TGGTGGAGTAGCAACTTTCG+CGG | - | chr3_1:2163341-2163360 | Msa0343720:CDS | 50.0% | |
| !!! | ACCTGGTGGGTTGTTTTGGT+TGG | - | chr3_1:2163596-2163615 | Msa0343720:CDS | 50.0% |
| TCCAACCAAAACAACCCACC+AGG | + | chr3_1:2163600-2163619 | Msa0343710:intron | 50.0% | |
| AGTGGAGGAATGGTAAGTGG+AGG | + | chr3_1:2162731-2162750 | Msa0343710:intron | 50.0% | |
| TGGAGGCAAAGAATTCCGGT+GGG | + | chr3_1:2162822-2162841 | Msa0343710:intron | 50.0% | |
| GAGGTGGAGGCAAAGAATTC+CGG | + | chr3_1:2162826-2162845 | Msa0343710:intron | 50.0% | |
| ! | GAGTTTTTGTGGTGAGGTGG+AGG | + | chr3_1:2162839-2162858 | Msa0343710:intron | 50.0% |
| ! | TGGGAGTTTTTGTGGTGAGG+TGG | + | chr3_1:2162842-2162861 | Msa0343710:intron | 50.0% |
| ! | CGGTGTCGGAGTTGAAGTTT+CGG | + | chr3_1:2162876-2162895 | Msa0343710:intron | 50.0% |
| ATGAAGCTGCGGATATCGTC+GGG | + | chr3_1:2162934-2162953 | Msa0343710:intron | 50.0% | |
| CATGAAGCTGCGGATATCGT+CGG | + | chr3_1:2162935-2162954 | Msa0343710:intron | 50.0% | |
| ACATGATCCGTTCACGTCGT+AGG | + | chr3_1:2162959-2162978 | Msa0343710:intron | 50.0% | |
| TGAGAGAGAATCTCGTCGTC+TGG | + | chr3_1:2162982-2163001 | Msa0343710:intron | 50.0% | |
| ! | GAGGCTCACAGCCTTTTAGT+AGG | + | chr3_1:2163011-2163030 | Msa0343710:intron | 50.0% |
| ATGGGCGATGGGAAATTAGG+TGG | + | chr3_1:2163063-2163082 | Msa0343710:intron | 50.0% | |
| GTGTAGACCAGAGACTGGAA+GGG | + | chr3_1:2163092-2163111 | Msa0343710:intron | 50.0% | |
| CACACGACGGAGGAATTTGA+GGG | + | chr3_1:2163114-2163133 | Msa0343710:intron | 50.0% | |
| TGTGTAAGCAGTCCACACGA+CGG | + | chr3_1:2163127-2163146 | Msa0343710:intron | 50.0% | |
| ACGGTCAATGAGACACGTGT+AGG | + | chr3_1:2163157-2163176 | Msa0343710:intron | 50.0% | |
| !! | AAACCCGGTTCGGTTCGAAT+CGG | - | chr3_1:2163306-2163325 | Msa0343720:CDS | 50.0% |
| !! | AAACCGATTCGAACCGAACC+GGG | + | chr3_1:2163312-2163331 | Msa0343710:intron | 50.0% |
| TGGTGGAGTAGCAACTTTCG+CGG | - | chr3_1:2163341-2163360 | Msa0343720:CDS | 50.0% | |
| !!! | ACCTGGTGGGTTGTTTTGGT+TGG | - | chr3_1:2163596-2163615 | Msa0343720:CDS | 50.0% |
| TCCAACCAAAACAACCCACC+AGG | + | chr3_1:2163600-2163619 | Msa0343710:intron | 50.0% | |
| AGGCAAAGAATTCCGGTGGG+AGG | + | chr3_1:2162819-2162838 | Msa0343710:intron | 55.0% | |
| GTGGAGGCAAAGAATTCCGG+TGG | + | chr3_1:2162823-2162842 | Msa0343710:intron | 55.0% | |
| GCGGATATCGTCGGGAAAGA+GGG | + | chr3_1:2162926-2162945 | Msa0343710:intron | 55.0% | |
| TGCGGATATCGTCGGGAAAG+AGG | + | chr3_1:2162927-2162946 | Msa0343710:intron | 55.0% | |
| CGTCGTAGGACATGAAGCTG+CGG | + | chr3_1:2162945-2162964 | Msa0343710:intron | 55.0% | |
| !! | AATTAGGTGGTGCTGCCGGA+CGG | + | chr3_1:2163050-2163069 | Msa0343710:intron | 55.0% |
| !! | GGGAAATTAGGTGGTGCTGC+CGG | + | chr3_1:2163054-2163073 | Msa0343710:intron | 55.0% |
| GGGATGGGCGATGGGAAATT+AGG | + | chr3_1:2163066-2163085 | Msa0343710:intron | 55.0% | |
| AGACTGGAAGGGAAGGGGAT+GGG | + | chr3_1:2163081-2163100 | Msa0343710:intron | 55.0% | |
| ACCAGAGACTGGAAGGGAAG+GGG | + | chr3_1:2163086-2163105 | Msa0343710:intron | 55.0% | |
| GACCAGAGACTGGAAGGGAA+GGG | + | chr3_1:2163087-2163106 | Msa0343710:intron | 55.0% | |
| AGACCAGAGACTGGAAGGGA+AGG | + | chr3_1:2163088-2163107 | Msa0343710:intron | 55.0% | |
| GGTGTAGACCAGAGACTGGA+AGG | + | chr3_1:2163093-2163112 | Msa0343710:intron | 55.0% | |
| ! | TGAGGGTGTAGACCAGAGAC+TGG | + | chr3_1:2163097-2163116 | Msa0343710:intron | 55.0% |
| CCACACGACGGAGGAATTTG+AGG | + | chr3_1:2163115-2163134 | Msa0343710:intron | 55.0% | |
| CCTCAAATTCCTCCGTCGTG+TGG | - | chr3_1:2163112-2163131 | Msa0343720:CDS | 55.0% | |
| ATCGAAGCCTCTCTGTGTGC+GGG | + | chr3_1:2163181-2163200 | Msa0343710:intron | 55.0% | |
| CATCGAAGCCTCTCTGTGTG+CGG | + | chr3_1:2163182-2163201 | Msa0343710:intron | 55.0% | |
| TTGTCCAACGGTGCTTCTCG+CGG | + | chr3_1:2163233-2163252 | Msa0343710:intron | 55.0% | |
| AGGCAAAGAATTCCGGTGGG+AGG | + | chr3_1:2162819-2162838 | Msa0343710:intron | 55.0% | |
| GTGGAGGCAAAGAATTCCGG+TGG | + | chr3_1:2162823-2162842 | Msa0343710:intron | 55.0% | |
| GCGGATATCGTCGGGAAAGA+GGG | + | chr3_1:2162926-2162945 | Msa0343710:intron | 55.0% | |
| TGCGGATATCGTCGGGAAAG+AGG | + | chr3_1:2162927-2162946 | Msa0343710:intron | 55.0% | |
| CGTCGTAGGACATGAAGCTG+CGG | + | chr3_1:2162945-2162964 | Msa0343710:intron | 55.0% | |
| !! | AATTAGGTGGTGCTGCCGGA+CGG | + | chr3_1:2163050-2163069 | Msa0343710:intron | 55.0% |
| !! | GGGAAATTAGGTGGTGCTGC+CGG | + | chr3_1:2163054-2163073 | Msa0343710:intron | 55.0% |
| GGGATGGGCGATGGGAAATT+AGG | + | chr3_1:2163066-2163085 | Msa0343710:intron | 55.0% | |
| AGACTGGAAGGGAAGGGGAT+GGG | + | chr3_1:2163081-2163100 | Msa0343710:intron | 55.0% | |
| ACCAGAGACTGGAAGGGAAG+GGG | + | chr3_1:2163086-2163105 | Msa0343710:intron | 55.0% | |
| GACCAGAGACTGGAAGGGAA+GGG | + | chr3_1:2163087-2163106 | Msa0343710:intron | 55.0% | |
| AGACCAGAGACTGGAAGGGA+AGG | + | chr3_1:2163088-2163107 | Msa0343710:intron | 55.0% | |
| GGTGTAGACCAGAGACTGGA+AGG | + | chr3_1:2163093-2163112 | Msa0343710:intron | 55.0% | |
| ! | TGAGGGTGTAGACCAGAGAC+TGG | + | chr3_1:2163097-2163116 | Msa0343710:intron | 55.0% |
| CCACACGACGGAGGAATTTG+AGG | + | chr3_1:2163115-2163134 | Msa0343710:intron | 55.0% | |
| CCTCAAATTCCTCCGTCGTG+TGG | - | chr3_1:2163112-2163131 | Msa0343720:CDS | 55.0% | |
| ATCGAAGCCTCTCTGTGTGC+GGG | + | chr3_1:2163181-2163200 | Msa0343710:intron | 55.0% | |
| CATCGAAGCCTCTCTGTGTG+CGG | + | chr3_1:2163182-2163201 | Msa0343710:intron | 55.0% | |
| TTGTCCAACGGTGCTTCTCG+CGG | + | chr3_1:2163233-2163252 | Msa0343710:intron | 55.0% | |
| GTCGCCAGCGCTGTCTTCAA+CGG | + | chr3_1:2162791-2162810 | Msa0343710:intron | 60.0% | |
| TGGCGACAGTAACCTCCCAC+CGG | - | chr3_1:2162804-2162823 | Msa0343720:CDS | 60.0% | |
| ! | AAAGAGGGTGCATGCGCTGC+CGG | + | chr3_1:2162911-2162930 | Msa0343710:intron | 60.0% |
| AAGGGAAGGGGATGGGCGAT+GGG | + | chr3_1:2163074-2163093 | Msa0343710:intron | 60.0% | |
| GAGACTGGAAGGGAAGGGGA+TGG | + | chr3_1:2163082-2163101 | Msa0343710:intron | 60.0% | |
| TCCCCTTCCCTTCCAGTCTC+TGG | - | chr3_1:2163082-2163101 | Msa0343720:CDS | 60.0% | |
| GTAAGCAGTCCACACGACGG+AGG | + | chr3_1:2163124-2163143 | Msa0343710:intron | 60.0% | |
| AGCCTCTCTGTGTGCGGGAA+CGG | + | chr3_1:2163176-2163195 | Msa0343710:intron | 60.0% | |
| GTCGCCAGCGCTGTCTTCAA+CGG | + | chr3_1:2162791-2162810 | Msa0343710:intron | 60.0% | |
| TGGCGACAGTAACCTCCCAC+CGG | - | chr3_1:2162804-2162823 | Msa0343720:CDS | 60.0% | |
| ! | AAAGAGGGTGCATGCGCTGC+CGG | + | chr3_1:2162911-2162930 | Msa0343710:intron | 60.0% |
| AAGGGAAGGGGATGGGCGAT+GGG | + | chr3_1:2163074-2163093 | Msa0343710:intron | 60.0% | |
| GAGACTGGAAGGGAAGGGGA+TGG | + | chr3_1:2163082-2163101 | Msa0343710:intron | 60.0% | |
| TCCCCTTCCCTTCCAGTCTC+TGG | - | chr3_1:2163082-2163101 | Msa0343720:CDS | 60.0% | |
| GTAAGCAGTCCACACGACGG+AGG | + | chr3_1:2163124-2163143 | Msa0343710:intron | 60.0% | |
| AGCCTCTCTGTGTGCGGGAA+CGG | + | chr3_1:2163176-2163195 | Msa0343710:intron | 60.0% | |
| TTCAACGGCGGTGGCTGTGG+TGG | + | chr3_1:2162776-2162795 | Msa0343710:intron | 65.0% | |
| GTCTTCAACGGCGGTGGCTG+TGG | + | chr3_1:2162779-2162798 | Msa0343710:intron | 65.0% | |
| AGCGCTGTCTTCAACGGCGG+TGG | + | chr3_1:2162785-2162804 | Msa0343710:intron | 65.0% | |
| ACCGCCGTTGAAGACAGCGC+TGG | - | chr3_1:2162784-2162803 | Msa0343720:CDS | 65.0% | |
| GCCAGCGCTGTCTTCAACGG+CGG | + | chr3_1:2162788-2162807 | Msa0343710:intron | 65.0% | |
| GAAGGGAAGGGGATGGGCGA+TGG | + | chr3_1:2163075-2163094 | Msa0343710:intron | 65.0% | |
| GACCGTTCCCGCACACAGAG+AGG | - | chr3_1:2163171-2163190 | Msa0343720:CDS | 65.0% | |
| TTCAACGGCGGTGGCTGTGG+TGG | + | chr3_1:2162776-2162795 | Msa0343710:intron | 65.0% | |
| GTCTTCAACGGCGGTGGCTG+TGG | + | chr3_1:2162779-2162798 | Msa0343710:intron | 65.0% | |
| AGCGCTGTCTTCAACGGCGG+TGG | + | chr3_1:2162785-2162804 | Msa0343710:intron | 65.0% | |
| ACCGCCGTTGAAGACAGCGC+TGG | - | chr3_1:2162784-2162803 | Msa0343720:CDS | 65.0% | |
| GCCAGCGCTGTCTTCAACGG+CGG | + | chr3_1:2162788-2162807 | Msa0343710:intron | 65.0% | |
| GAAGGGAAGGGGATGGGCGA+TGG | + | chr3_1:2163075-2163094 | Msa0343710:intron | 65.0% | |
| GACCGTTCCCGCACACAGAG+AGG | - | chr3_1:2163171-2163190 | Msa0343720:CDS | 65.0% | |
| AACGGCGGTGGCTGTGGTGG+TGG | + | chr3_1:2162773-2162792 | Msa0343710:intron | 70.0% | |
| !! | GTGGTGCTGCCGGACGGCAA+CGG | + | chr3_1:2163044-2163063 | Msa0343710:intron | 70.0% |
| !! | ACGGCCGCGAGAAGCACCGT+TGG | - | chr3_1:2163226-2163245 | Msa0343720:CDS | 70.0% |
| AACGGCGGTGGCTGTGGTGG+TGG | + | chr3_1:2162773-2162792 | Msa0343710:intron | 70.0% | |
| !! | GTGGTGCTGCCGGACGGCAA+CGG | + | chr3_1:2163044-2163063 | Msa0343710:intron | 70.0% |
| !! | ACGGCCGCGAGAAGCACCGT+TGG | - | chr3_1:2163226-2163245 | Msa0343720:CDS | 70.0% |
| GGCGGGAGGGTGGACGGTGT+CGG | + | chr3_1:2162890-2162909 | Msa0343710:intron | 75.0% | |
| GACACCGTCCACCCTCCCGC+CGG | - | chr3_1:2162889-2162908 | Msa0343720:CDS | 75.0% | |
| TGCATGCGCTGCCGGCGGGA+GGG | + | chr3_1:2162903-2162922 | Msa0343710:intron | 75.0% | |
| AGGGTGCATGCGCTGCCGGC+GGG | + | chr3_1:2162907-2162926 | Msa0343710:intron | 75.0% | |
| ! | GAGGGTGCATGCGCTGCCGG+CGG | + | chr3_1:2162908-2162927 | Msa0343710:intron | 75.0% |
| GTGCTGCCGGACGGCAACGG+CGG | + | chr3_1:2163041-2163060 | Msa0343710:intron | 75.0% | |
| GGCGGGAGGGTGGACGGTGT+CGG | + | chr3_1:2162890-2162909 | Msa0343710:intron | 75.0% | |
| GACACCGTCCACCCTCCCGC+CGG | - | chr3_1:2162889-2162908 | Msa0343720:CDS | 75.0% | |
| TGCATGCGCTGCCGGCGGGA+GGG | + | chr3_1:2162903-2162922 | Msa0343710:intron | 75.0% | |
| AGGGTGCATGCGCTGCCGGC+GGG | + | chr3_1:2162907-2162926 | Msa0343710:intron | 75.0% | |
| ! | GAGGGTGCATGCGCTGCCGG+CGG | + | chr3_1:2162908-2162927 | Msa0343710:intron | 75.0% |
| GTGCTGCCGGACGGCAACGG+CGG | + | chr3_1:2163041-2163060 | Msa0343710:intron | 75.0% | |
| ! | GCTGCCGGCGGGAGGGTGGA+CGG | + | chr3_1:2162896-2162915 | Msa0343710:intron | 80.0% |
| ! | ATGCGCTGCCGGCGGGAGGG+TGG | + | chr3_1:2162900-2162919 | Msa0343710:intron | 80.0% |
| ! | GTGCATGCGCTGCCGGCGGG+AGG | + | chr3_1:2162904-2162923 | Msa0343710:intron | 80.0% |
| ! | CGGCAACGGCGGCGAGGGAG+AGG | + | chr3_1:2163030-2163049 | Msa0343710:intron | 80.0% |
| ! | CCGGACGGCAACGGCGGCGA+GGG | + | chr3_1:2163035-2163054 | Msa0343710:intron | 80.0% |
| ! | CCCTCGCCGCCGTTGCCGTC+CGG | - | chr3_1:2163032-2163051 | Msa0343720:CDS | 80.0% |
| ! | GCTGCCGGCGGGAGGGTGGA+CGG | + | chr3_1:2162896-2162915 | Msa0343710:intron | 80.0% |
| ! | ATGCGCTGCCGGCGGGAGGG+TGG | + | chr3_1:2162900-2162919 | Msa0343710:intron | 80.0% |
| ! | GTGCATGCGCTGCCGGCGGG+AGG | + | chr3_1:2162904-2162923 | Msa0343710:intron | 80.0% |
| ! | CGGCAACGGCGGCGAGGGAG+AGG | + | chr3_1:2163030-2163049 | Msa0343710:intron | 80.0% |
| ! | CCGGACGGCAACGGCGGCGA+GGG | + | chr3_1:2163035-2163054 | Msa0343710:intron | 80.0% |
| ! | CCCTCGCCGCCGTTGCCGTC+CGG | - | chr3_1:2163032-2163051 | Msa0343720:CDS | 80.0% |
| ! | GCCGGACGGCAACGGCGGCG+AGG | + | chr3_1:2163036-2163055 | Msa0343710:intron | 85.0% |
| ! | GCCGGACGGCAACGGCGGCG+AGG | + | chr3_1:2163036-2163055 | Msa0343710:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 2162631 | 2163791 | 2162631 | ID=Msa0343720;Name=Msa0343720 |
| chr3_1 | mRNA | 2162631 | 2163791 | 2162631 | ID=Msa0343720-mRNA-1;Parent=Msa0343720;Name=Msa0343720-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|386 |
| chr3_1 | exon | 2162631 | 2163791 | 2162631 | ID=Msa0343720-mRNA-1:exon:660;Parent=Msa0343720-mRNA-1 |
| chr3_1 | CDS | 2162631 | 2163791 | 2162631 | ID=Msa0343720-mRNA-1:cds;Parent=Msa0343720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
