AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0044720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044720 MtrunA17_Chr1g0211891 95.484 310 9 1 14 323 11 315 0.0 570
Msa0044720 MtrunA17_Chr6g0481701 45.361 291 121 5 1 253 1 291 3.64e-65 209
Msa0044720 MtrunA17_Chr3g0112071 37.255 255 116 9 16 244 7 243 3.28e-42 150
Msa0044720 MtrunA17_Chr3g0121201 46.012 163 66 4 143 301 189 333 4.57e-40 144
Msa0044720 MtrunA17_Chr4g0031931 32.281 285 148 9 16 281 12 270 6.22e-37 135
Msa0044720 MtrunA17_Chr2g0328531 32.143 280 160 10 16 281 14 277 6.75e-37 135
Msa0044720 MtrunA17_Chr5g0435561 30.282 284 154 9 17 272 5 272 4.44e-32 123
Msa0044720 MtrunA17_Chr1g0212081 43.671 158 76 5 94 250 172 317 1.38e-31 120
Msa0044720 MtrunA17_Chr3g0114781 30.483 269 129 11 14 243 18 267 1.78e-31 120
Msa0044720 MtrunA17_Chr5g0441191 49.505 101 48 2 142 242 148 245 2.32e-31 120
Msa0044720 MtrunA17_Chr7g0245341 46.154 117 63 0 141 257 289 405 7.23e-31 121
Msa0044720 MtrunA17_Chr1g0171791 43.165 139 70 3 142 280 107 236 2.05e-30 115
Msa0044720 MtrunA17_Chr4g0061811 47.059 119 60 1 133 251 299 414 1.61e-28 114
Msa0044720 MtrunA17_Chr3g0093621 45.098 102 52 2 141 242 138 235 9.58e-27 106
Msa0044720 MtrunA17_Chr6g0461611 39.370 127 69 2 143 267 186 306 1.97e-26 106
Msa0044720 MtrunA17_Chr6g0456041 43.902 123 69 0 127 249 204 326 4.56e-24 100
Msa0044720 MtrunA17_Chr1g0150571 39.623 106 62 1 147 250 181 286 3.46e-22 94.7
Msa0044720 MtrunA17_Chr2g0278071 56.923 65 27 1 177 241 239 302 6.61e-21 92.0
Msa0044720 MtrunA17_Chr5g0417501 38.384 99 55 2 149 247 73 165 1.58e-19 85.9
Msa0044720 MtrunA17_Chr3g0124731 46.575 73 36 1 171 243 166 235 3.19e-18 82.4
Msa0044720 MtrunA17_Chr3g0086801 28.571 119 75 3 129 241 35 149 6.38e-14 68.6
Msa0044720 MtrunA17_Chr2g0308971 43.478 69 39 0 197 265 109 177 6.93e-13 67.0
Msa0044720 MtrunA17_Chr1g0181921 40.000 75 40 1 172 246 189 258 1.23e-12 67.0
Msa0044720 MtrunA17_Chr6g0486651 33.708 89 58 1 158 245 80 168 3.78e-11 63.5
Msa0044720 MtrunA17_Chr3g0089261 38.356 73 36 2 171 243 279 342 4.78e-11 63.2
Msa0044720 MtrunA17_Chr7g0244851 32.110 109 68 2 154 261 64 167 4.90e-11 60.8
Msa0044720 MtrunA17_Chr2g0315711 26.994 163 95 5 93 243 180 330 6.78e-11 62.4
Msa0044720 MtrunA17_Chr2g0316591 42.308 52 30 0 193 244 249 300 7.31e-11 62.4
Msa0044720 MtrunA17_Chr8g0352131 36.620 71 42 1 174 241 170 240 8.31e-11 61.2
Msa0044720 MtrunA17_Chr3g0139031 35.484 62 32 1 197 250 152 213 9.11e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044720 AT3G19950.1 53.333 300 99 9 1 270 1 289 1.39e-94 284
Msa0044720 AT3G19950.2 53.333 300 99 9 1 270 59 347 1.81e-94 285
Msa0044720 AT3G19950.3 53.333 300 99 9 1 270 59 347 1.81e-94 285
Msa0044720 AT1G55530.1 60.656 122 39 3 139 257 170 285 2.04e-44 155
Msa0044720 AT1G55530.2 60.656 122 39 3 139 257 170 285 2.04e-44 155
Msa0044720 AT3G13430.4 37.024 289 132 10 16 259 9 292 2.84e-44 154
Msa0044720 AT3G13430.3 37.024 289 132 10 16 259 9 292 2.84e-44 154
Msa0044720 AT3G13430.1 37.024 289 132 10 16 259 9 292 2.84e-44 154
Msa0044720 AT3G13430.2 37.024 289 132 10 16 259 9 292 2.84e-44 154
Msa0044720 AT1G55530.3 61.017 118 38 2 142 257 141 252 8.44e-44 153
Msa0044720 AT5G56340.1 45.810 179 73 5 128 301 204 363 2.82e-40 145
Msa0044720 AT4G26400.2 51.327 113 49 1 141 253 191 297 5.07e-36 133
Msa0044720 AT4G26400.1 51.327 113 49 1 141 253 191 297 5.07e-36 133
Msa0044720 AT3G46620.1 30.314 287 160 8 16 281 31 298 2.07e-35 132
Msa0044720 AT2G40830.1 34.167 240 133 7 17 243 9 236 2.41e-35 131
Msa0044720 AT2G40830.3 34.167 240 133 7 17 243 9 236 2.41e-35 131
Msa0044720 AT2G40830.4 34.167 240 133 7 17 243 9 236 2.41e-35 131
Msa0044720 AT2G40830.2 34.167 240 133 7 17 243 9 236 2.41e-35 131
Msa0044720 AT3G56580.3 35.146 239 126 7 17 242 9 231 1.34e-33 126
Msa0044720 AT3G56580.1 35.146 239 126 7 17 242 9 231 1.34e-33 126
Msa0044720 AT3G56580.2 35.146 239 126 7 17 242 9 231 1.34e-33 126
Msa0044720 AT5G59550.1 41.290 155 83 4 125 272 122 275 3.67e-33 127
Msa0044720 AT5G59550.2 41.290 155 83 4 125 272 227 380 1.26e-32 127
Msa0044720 AT2G39720.1 31.727 249 146 8 16 245 6 249 7.75e-32 123
Msa0044720 AT2G39720.2 31.727 249 146 8 16 245 6 249 7.75e-32 123
Msa0044720 AT5G01980.1 47.368 114 59 1 141 254 295 407 2.79e-31 123
Msa0044720 AT1G60360.1 30.556 288 148 11 3 253 8 280 4.13e-31 119
Msa0044720 AT5G15820.1 48.039 102 53 0 152 253 246 347 2.10e-28 112
Msa0044720 AT5G08139.1 45.714 105 47 2 152 251 264 363 1.63e-25 105
Msa0044720 AT3G02340.1 40.517 116 68 1 153 267 291 406 3.85e-25 104
Msa0044720 AT3G02340.2 40.517 116 68 1 153 267 291 406 3.85e-25 104
Msa0044720 AT5G20910.1 48.810 84 41 1 169 250 200 283 1.94e-23 98.6
Msa0044720 AT3G10815.1 45.745 94 49 2 151 244 77 168 8.09e-22 91.7
Msa0044720 AT5G64920.1 43.802 121 62 3 138 253 194 313 7.73e-21 91.7
Msa0044720 AT1G26800.1 37.383 107 60 2 150 256 73 172 1.01e-19 86.3
Msa0044720 AT5G60820.1 39.806 103 56 3 145 244 320 419 5.35e-18 84.7
Msa0044720 AT1G68180.1 44.595 74 40 1 168 241 110 182 1.12e-17 81.3
Msa0044720 AT3G60080.1 43.243 74 35 1 177 243 142 215 1.72e-16 79.0
Msa0044720 AT1G14200.1 39.506 81 48 1 162 242 75 154 4.77e-16 75.5
Msa0044720 AT2G44330.1 30.233 129 78 3 121 243 20 142 7.78e-15 72.0
Msa0044720 AT1G18770.1 39.474 76 45 1 167 242 30 104 7.46e-14 67.4
Msa0044720 AT2G29840.1 37.895 95 57 2 152 245 199 292 1.31e-13 70.5
Msa0044720 AT5G02750.1 49.020 51 26 0 196 246 213 263 1.45e-13 70.5
Msa0044720 AT2G03000.1 40.845 71 36 2 171 241 461 525 1.78e-12 68.6
Msa0044720 AT1G18760.1 34.940 83 52 1 163 245 143 223 2.40e-12 65.9
Msa0044720 AT5G52140.1 30.097 103 61 3 141 241 185 278 2.64e-11 63.5

Find 122 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATCTGAACCAGGGTTT+CGG 0.222566 1_1:+76352750 Msa0044720:CDS
AGAAAACCTTGGAAGCAAAT+TGG 0.253434 1_1:-76352467 None:intergenic
CGGAAAATCACGTTAGGGTT+AGG 0.253624 1_1:-76352518 None:intergenic
TGAATCTGAACCAGGGTTTC+GGG 0.260029 1_1:+76352751 Msa0044720:CDS
TTAATTCTGCTTCCGTTTCC+AGG 0.291944 1_1:+76352621 Msa0044720:CDS
TGGAAATAGGCAAGAAGATT+TGG 0.294855 1_1:+76353303 Msa0044720:CDS
GACTCTGGTGAAAGGGGATT+TGG 0.316145 1_1:+76353283 Msa0044720:CDS
GAGTTACGAGTCATGTCTTC+TGG 0.323312 1_1:+76352347 None:intergenic
GTGAAAGGGGATTTGGAAAT+AGG 0.323534 1_1:+76353290 Msa0044720:CDS
ATATCTCTGCGGTATCCTTT+TGG 0.328546 1_1:+76353241 Msa0044720:CDS
TGGAAACGGAAGCAGAATTA+AGG 0.337608 1_1:-76352619 None:intergenic
GGCAATTCATGTCGACAAAC+AGG 0.344933 1_1:-76353061 None:intergenic
ATCGGAATCGGGTCGGGTCC+TGG 0.349609 1_1:-76352639 None:intergenic
GGCGATTACTTCCTCGGTGC+TGG 0.350083 1_1:+76352788 Msa0044720:CDS
GGTGGTGGTAGCAGTGGTGG+TGG 0.356931 1_1:+76353184 Msa0044720:CDS
TTTCGGGTTCCCTCTAACCT+TGG 0.381086 1_1:+76352767 Msa0044720:CDS
GGTGGTAGCAGTGGTGGTGG+AGG 0.383648 1_1:+76353187 Msa0044720:CDS
GGCGATGGCGGTGGTGGCGG+TGG 0.385441 1_1:+76352371 Msa0044720:CDS
TTCTGCCCAATTTGCTTCCA+AGG 0.391229 1_1:+76352461 Msa0044720:CDS
TGCTCAGGACTCTGGTGAAA+GGG 0.401420 1_1:+76353276 Msa0044720:CDS
ATGATGATTGCTTGCTTCCA+TGG 0.401701 1_1:+76353017 Msa0044720:CDS
GAAAACCTTGGAAGCAAATT+GGG 0.402814 1_1:-76352466 None:intergenic
GGAAAATCACGTTAGGGTTA+GGG 0.416687 1_1:-76352517 None:intergenic
GGTGGTGGTGGTAGCAGTGG+TGG 0.420491 1_1:+76353181 Msa0044720:CDS
AGGGATGGTAACGGTGGCGA+TGG 0.423838 1_1:+76353115 Msa0044720:CDS
GATGGCGGTGGTGGCGGTGG+AGG 0.427865 1_1:+76352374 Msa0044720:CDS
GGCGGTGTGCCGTAACGATT+CGG 0.428230 1_1:-76352848 None:intergenic
TGGTTCAGATGACTCTGCTC+AGG 0.429490 1_1:+76353261 Msa0044720:CDS
GTTAGGGTTAGGGTTAGGTT+CGG 0.433893 1_1:-76352507 None:intergenic
GGTAGCAGTGGTGGTGGAGG+AGG 0.436996 1_1:+76353190 Msa0044720:CDS
TCTGGCGGCGATGGCGGTGG+TGG 0.437691 1_1:+76352365 Msa0044720:CDS
TTAGGGTTAGGGTTAGGTTC+GGG 0.443732 1_1:-76352506 None:intergenic
GAAGGGATGGAATGGAAATT+CGG 0.445340 1_1:-76352579 None:intergenic
CATCCTTCTGAATCTGAACC+AGG 0.445750 1_1:+76352743 Msa0044720:CDS
AACAGTACCGTTGGTGGTGG+TGG 0.448041 1_1:+76353160 Msa0044720:CDS
GGCGGCGATGGCGGTGGTGG+CGG 0.448894 1_1:+76352368 Msa0044720:CDS
AACCTTGGCGATTACTTCCT+CGG 0.449887 1_1:+76352782 Msa0044720:CDS
GAAGTAATCGCCAAGGTTAG+AGG 0.450993 1_1:-76352777 None:intergenic
ATGATGCTGATTATGAGAAC+CGG 0.453554 1_1:+76353089 Msa0044720:CDS
AAGCAGAATTAAGGAGTAAT+GGG 0.453884 1_1:-76352610 None:intergenic
GTAACGGTGGCGATGGGTTG+AGG 0.457788 1_1:+76353122 Msa0044720:CDS
GAATCAATGTGCTGTTTGTC+AGG 0.459494 1_1:+76352940 Msa0044720:CDS
ATCGGGTCGGGTCCTGGAAA+CGG 0.461334 1_1:-76352633 None:intergenic
ATCACGTTAGGGTTAGGGTT+AGG 0.462218 1_1:-76352512 None:intergenic
TTGAAGCGGAAAATCACGTT+AGG 0.465974 1_1:-76352524 None:intergenic
GGGGTCGAAACTATCGGAAT+CGG 0.469880 1_1:-76352651 None:intergenic
TGTCAGGATGAGTTTGAGAA+AGG 0.474239 1_1:+76352956 Msa0044720:CDS
GATGGGTTGAGGTCTGTTGT+TGG 0.484013 1_1:+76353133 Msa0044720:CDS
TGGAAATTCGGAATCTGAAT+CGG 0.491233 1_1:-76352567 None:intergenic
GAGAATGATCCGAATCGTTA+CGG 0.491542 1_1:+76352839 Msa0044720:CDS
GAGTAATGGGAGAAGAGCGA+AGG 0.493838 1_1:-76352597 None:intergenic
GATGACTCTGCTCAGGACTC+TGG 0.494585 1_1:+76353268 Msa0044720:CDS
GTCATGTCTTCTGGCGGCGA+TGG 0.494693 1_1:+76352356 None:intergenic
TTCAGAATCATCGTCGGTGC+AGG 0.495095 1_1:-76352435 None:intergenic
TGGAAGCAAATTGGGCAGAA+AGG 0.499109 1_1:-76352458 None:intergenic
CTGCTCAGGACTCTGGTGAA+AGG 0.499574 1_1:+76353275 Msa0044720:CDS
GAAGCAGAATTAAGGAGTAA+TGG 0.500388 1_1:-76352611 None:intergenic
ATGGGAGAAGAGCGAAGGGA+TGG 0.502378 1_1:-76352592 None:intergenic
TCTTCTGGCGGCGATGGCGG+TGG 0.504625 1_1:+76352362 Msa0044720:CDS
CACACCGCCGGCGTCGAAAG+AGG 0.509979 1_1:+76352862 Msa0044720:CDS
GAAACTATCGGAATCGGGTC+GGG 0.511848 1_1:-76352645 None:intergenic
AGTAATGGGAGAAGAGCGAA+GGG 0.512255 1_1:-76352596 None:intergenic
TCATGATAAACATGCTTACA+AGG 0.513615 1_1:-76352998 None:intergenic
GCAGAGTCATCTGAACCAAA+AGG 0.515275 1_1:-76353256 None:intergenic
CACATTCTTCGAGAAAACCT+TGG 0.516574 1_1:-76352478 None:intergenic
AGTACCGTTGGTGGTGGTGG+TGG 0.516728 1_1:+76353163 Msa0044720:CDS
TGATGATGCGTTGTTGAACT+CGG 0.517659 1_1:+76352913 Msa0044720:CDS
GAATTGAATGTTTGCACCGT+CGG 0.523561 1_1:-76352711 None:intergenic
AGCGAAGGGGTCGAAACTAT+CGG 0.525966 1_1:-76352657 None:intergenic
TCTTCTGCCACGTGTGCAGT+CGG 0.526650 1_1:+76352405 Msa0044720:CDS
TGTTTGCACCGTCGGCGTGA+AGG 0.527557 1_1:-76352703 None:intergenic
AGAAGAGCGAAGGGATGGAA+TGG 0.530439 1_1:-76352587 None:intergenic
CGGAGGAATGATCGTGATGA+TGG 0.542624 1_1:-76352547 None:intergenic
GGGATGGTAACGGTGGCGAT+GGG 0.544115 1_1:+76353116 Msa0044720:CDS
GGGTCGAAACTATCGGAATC+GGG 0.544986 1_1:-76352650 None:intergenic
ATTCTGAAAGTTCTGTGGAC+AGG 0.545677 1_1:-76353220 None:intergenic
ATGTCTTCTGGCGGCGATGG+CGG 0.545998 1_1:+76352359 Msa0044720:CDS
CTGATTATGAGAACCGGGGT+AGG 0.547933 1_1:+76353095 Msa0044720:CDS
TATGAGAACCGGGGTAGGGA+TGG 0.558385 1_1:+76353100 Msa0044720:CDS
CGAAACTATCGGAATCGGGT+CGG 0.558631 1_1:-76352646 None:intergenic
GGTAACAGTACCGTTGGTGG+TGG 0.569307 1_1:+76353157 Msa0044720:CDS
ACAGCCTCTTTCGACGCCGG+CGG 0.572237 1_1:-76352866 None:intergenic
TGATTCTGAAGGAAAGCGAA+GGG 0.572754 1_1:-76352671 None:intergenic
GAATCGTTACGGCACACCGC+CGG 0.579890 1_1:+76352850 Msa0044720:CDS
GAGTTATGCAATTCAAGCCA+TGG 0.582250 1_1:-76353034 None:intergenic
AAGTAATCGCCAAGGTTAGA+GGG 0.588263 1_1:-76352776 None:intergenic
GCTCAGGACTCTGGTGAAAG+GGG 0.588802 1_1:+76353277 Msa0044720:CDS
GCAATTGATTCAGCAGCTTG+CGG 0.589049 1_1:+76352817 Msa0044720:CDS
GTTCAACAACGCATCATCAA+CGG 0.590877 1_1:-76352909 None:intergenic
TGATTATGAGAACCGGGGTA+GGG 0.593107 1_1:+76353096 Msa0044720:CDS
TTAACAGCCTCTTTCGACGC+CGG 0.593234 1_1:-76352869 None:intergenic
TGAAGCGGAAAATCACGTTA+GGG 0.593973 1_1:-76352523 None:intergenic
TTCCTTCAGAATCATCTCAA+CGG 0.596074 1_1:+76352680 Msa0044720:CDS
CTCAACGGCCTTCACGCCGA+CGG 0.597725 1_1:+76352695 Msa0044720:CDS
TCATAATCAGCATCATCAGT+AGG 0.603013 1_1:-76353082 None:intergenic
ATGATTCTGAAGGAAAGCGA+AGG 0.604871 1_1:-76352672 None:intergenic
ATCCTTCTGAATCTGAACCA+GGG 0.609564 1_1:+76352744 Msa0044720:CDS
CACCGTTACCATCCCTACCC+CGG 0.609569 1_1:-76353108 None:intergenic
TGATGCTGATTATGAGAACC+GGG 0.618591 1_1:+76353090 Msa0044720:CDS
GAGATATTCTGAAAGTTCTG+TGG 0.618924 1_1:-76353225 None:intergenic
GGCCGTTGAGATGATTCTGA+AGG 0.619045 1_1:-76352682 None:intergenic
GTTGGTGGTAACAGTACCGT+TGG 0.622508 1_1:+76353151 Msa0044720:CDS
TTAGAGGGAACCCGAAACCC+TGG 0.623256 1_1:-76352761 None:intergenic
TAACTCTCCGACTGCACACG+TGG 0.624454 1_1:-76352412 None:intergenic
GCAATTCATGTCGACAAACA+GGG 0.630959 1_1:-76353060 None:intergenic
GGGTTGAGGTCTGTTGTTGG+TGG 0.640822 1_1:+76353136 Msa0044720:CDS
GGTGGTAACAGTACCGTTGG+TGG 0.642968 1_1:+76353154 Msa0044720:CDS
GGCTGTTAAGAATCTTCCGA+CGG 0.643871 1_1:+76352883 Msa0044720:CDS
CACCGAGGAAGTAATCGCCA+AGG 0.647106 1_1:-76352784 None:intergenic
CGGGGTAGGGATGGTAACGG+TGG 0.648198 1_1:+76353109 Msa0044720:CDS
AACCCTGGTTCAGATTCAGA+AGG 0.650452 1_1:-76352746 None:intergenic
AAATTCGGAATCTGAATCGG+AGG 0.656689 1_1:-76352564 None:intergenic
TGAGTTTGAGAAAGGTACAC+AGG 0.657062 1_1:+76352964 Msa0044720:CDS
GATCGTGATGATGGTTGAAG+CGG 0.660952 1_1:-76352538 None:intergenic
GCATCATCAACGGTCACCGT+CGG 0.671989 1_1:-76352899 None:intergenic
GAAAGGTTCAGAATCATCGT+CGG 0.672533 1_1:-76352441 None:intergenic
TTACGAGTCATGTCTTCTGG+CGG 0.684570 1_1:+76352350 None:intergenic
AACCGGGGTAGGGATGGTAA+CGG 0.688725 1_1:+76353106 Msa0044720:CDS
GATTCTGAAGGAAAGCGAAG+GGG 0.714986 1_1:-76352670 None:intergenic
GAACTTTCAGAATATCTCTG+CGG 0.750243 1_1:+76353230 Msa0044720:CDS
ATTGCTCGAAGCCAGCACCG+AGG 0.759055 1_1:-76352799 None:intergenic
GATGCTGATTATGAGAACCG+GGG 0.800968 1_1:+76353091 Msa0044720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AAGCAGAATTAAGGAGTAAT+GGG - chr1_1:76352613-76352632 None:intergenic 30.0%
TCATGATAAACATGCTTACA+AGG - chr1_1:76353001-76353020 None:intergenic 30.0%
AAGCAGAATTAAGGAGTAAT+GGG - chr1_1:76352613-76352632 None:intergenic 30.0%
TCATGATAAACATGCTTACA+AGG - chr1_1:76353001-76353020 None:intergenic 30.0%
GAAAACCTTGGAAGCAAATT+GGG - chr1_1:76352469-76352488 None:intergenic 35.0%
AGAAAACCTTGGAAGCAAAT+TGG - chr1_1:76352470-76352489 None:intergenic 35.0%
TGGAAATTCGGAATCTGAAT+CGG - chr1_1:76352570-76352589 None:intergenic 35.0%
GAAGCAGAATTAAGGAGTAA+TGG - chr1_1:76352614-76352633 None:intergenic 35.0%
TTCCTTCAGAATCATCTCAA+CGG + chr1_1:76352680-76352699 Msa0044720:CDS 35.0%
TCATAATCAGCATCATCAGT+AGG - chr1_1:76353085-76353104 None:intergenic 35.0%
! ATGATGCTGATTATGAGAAC+CGG + chr1_1:76353089-76353108 Msa0044720:CDS 35.0%
! GAGATATTCTGAAAGTTCTG+TGG - chr1_1:76353228-76353247 None:intergenic 35.0%
GAACTTTCAGAATATCTCTG+CGG + chr1_1:76353230-76353249 Msa0044720:CDS 35.0%
TGGAAATAGGCAAGAAGATT+TGG + chr1_1:76353303-76353322 Msa0044720:CDS 35.0%
GAAAACCTTGGAAGCAAATT+GGG - chr1_1:76352469-76352488 None:intergenic 35.0%
AGAAAACCTTGGAAGCAAAT+TGG - chr1_1:76352470-76352489 None:intergenic 35.0%
TGGAAATTCGGAATCTGAAT+CGG - chr1_1:76352570-76352589 None:intergenic 35.0%
GAAGCAGAATTAAGGAGTAA+TGG - chr1_1:76352614-76352633 None:intergenic 35.0%
TTCCTTCAGAATCATCTCAA+CGG + chr1_1:76352680-76352699 Msa0044720:CDS 35.0%
TCATAATCAGCATCATCAGT+AGG - chr1_1:76353085-76353104 None:intergenic 35.0%
! ATGATGCTGATTATGAGAAC+CGG + chr1_1:76353089-76353108 Msa0044720:CDS 35.0%
! GAGATATTCTGAAAGTTCTG+TGG - chr1_1:76353228-76353247 None:intergenic 35.0%
GAACTTTCAGAATATCTCTG+CGG + chr1_1:76353230-76353249 Msa0044720:CDS 35.0%
TGGAAATAGGCAAGAAGATT+TGG + chr1_1:76353303-76353322 Msa0044720:CDS 35.0%
GAAAGGTTCAGAATCATCGT+CGG - chr1_1:76352444-76352463 None:intergenic 40.0%
CACATTCTTCGAGAAAACCT+TGG - chr1_1:76352481-76352500 None:intergenic 40.0%
GGAAAATCACGTTAGGGTTA+GGG - chr1_1:76352520-76352539 None:intergenic 40.0%
TGAAGCGGAAAATCACGTTA+GGG - chr1_1:76352526-76352545 None:intergenic 40.0%
TTGAAGCGGAAAATCACGTT+AGG - chr1_1:76352527-76352546 None:intergenic 40.0%
AAATTCGGAATCTGAATCGG+AGG - chr1_1:76352567-76352586 None:intergenic 40.0%
GAAGGGATGGAATGGAAATT+CGG - chr1_1:76352582-76352601 None:intergenic 40.0%
TGGAAACGGAAGCAGAATTA+AGG - chr1_1:76352622-76352641 None:intergenic 40.0%
TTAATTCTGCTTCCGTTTCC+AGG + chr1_1:76352621-76352640 Msa0044720:CDS 40.0%
! TGATTCTGAAGGAAAGCGAA+GGG - chr1_1:76352674-76352693 None:intergenic 40.0%
! ATGATTCTGAAGGAAAGCGA+AGG - chr1_1:76352675-76352694 None:intergenic 40.0%
GAATTGAATGTTTGCACCGT+CGG - chr1_1:76352714-76352733 None:intergenic 40.0%
ATCCTTCTGAATCTGAACCA+GGG + chr1_1:76352744-76352763 Msa0044720:CDS 40.0%
AAGTAATCGCCAAGGTTAGA+GGG - chr1_1:76352779-76352798 None:intergenic 40.0%
GAGAATGATCCGAATCGTTA+CGG + chr1_1:76352839-76352858 Msa0044720:CDS 40.0%
GTTCAACAACGCATCATCAA+CGG - chr1_1:76352912-76352931 None:intergenic 40.0%
! TGATGATGCGTTGTTGAACT+CGG + chr1_1:76352913-76352932 Msa0044720:CDS 40.0%
!! GAATCAATGTGCTGTTTGTC+AGG + chr1_1:76352940-76352959 Msa0044720:CDS 40.0%
TGTCAGGATGAGTTTGAGAA+AGG + chr1_1:76352956-76352975 Msa0044720:CDS 40.0%
! TGAGTTTGAGAAAGGTACAC+AGG + chr1_1:76352964-76352983 Msa0044720:CDS 40.0%
ATGATGATTGCTTGCTTCCA+TGG + chr1_1:76353017-76353036 Msa0044720:CDS 40.0%
GAGTTATGCAATTCAAGCCA+TGG - chr1_1:76353037-76353056 None:intergenic 40.0%
GCAATTCATGTCGACAAACA+GGG - chr1_1:76353063-76353082 None:intergenic 40.0%
! TGATGCTGATTATGAGAACC+GGG + chr1_1:76353090-76353109 Msa0044720:CDS 40.0%
! ATTCTGAAAGTTCTGTGGAC+AGG - chr1_1:76353223-76353242 None:intergenic 40.0%
! ATATCTCTGCGGTATCCTTT+TGG + chr1_1:76353241-76353260 Msa0044720:CDS 40.0%
GTGAAAGGGGATTTGGAAAT+AGG + chr1_1:76353290-76353309 Msa0044720:CDS 40.0%
GAAAGGTTCAGAATCATCGT+CGG - chr1_1:76352444-76352463 None:intergenic 40.0%
CACATTCTTCGAGAAAACCT+TGG - chr1_1:76352481-76352500 None:intergenic 40.0%
GGAAAATCACGTTAGGGTTA+GGG - chr1_1:76352520-76352539 None:intergenic 40.0%
TGAAGCGGAAAATCACGTTA+GGG - chr1_1:76352526-76352545 None:intergenic 40.0%
TTGAAGCGGAAAATCACGTT+AGG - chr1_1:76352527-76352546 None:intergenic 40.0%
AAATTCGGAATCTGAATCGG+AGG - chr1_1:76352567-76352586 None:intergenic 40.0%
GAAGGGATGGAATGGAAATT+CGG - chr1_1:76352582-76352601 None:intergenic 40.0%
TGGAAACGGAAGCAGAATTA+AGG - chr1_1:76352622-76352641 None:intergenic 40.0%
TTAATTCTGCTTCCGTTTCC+AGG + chr1_1:76352621-76352640 Msa0044720:CDS 40.0%
! TGATTCTGAAGGAAAGCGAA+GGG - chr1_1:76352674-76352693 None:intergenic 40.0%
! ATGATTCTGAAGGAAAGCGA+AGG - chr1_1:76352675-76352694 None:intergenic 40.0%
GAATTGAATGTTTGCACCGT+CGG - chr1_1:76352714-76352733 None:intergenic 40.0%
ATCCTTCTGAATCTGAACCA+GGG + chr1_1:76352744-76352763 Msa0044720:CDS 40.0%
AAGTAATCGCCAAGGTTAGA+GGG - chr1_1:76352779-76352798 None:intergenic 40.0%
GAGAATGATCCGAATCGTTA+CGG + chr1_1:76352839-76352858 Msa0044720:CDS 40.0%
GTTCAACAACGCATCATCAA+CGG - chr1_1:76352912-76352931 None:intergenic 40.0%
! TGATGATGCGTTGTTGAACT+CGG + chr1_1:76352913-76352932 Msa0044720:CDS 40.0%
!! GAATCAATGTGCTGTTTGTC+AGG + chr1_1:76352940-76352959 Msa0044720:CDS 40.0%
TGTCAGGATGAGTTTGAGAA+AGG + chr1_1:76352956-76352975 Msa0044720:CDS 40.0%
! TGAGTTTGAGAAAGGTACAC+AGG + chr1_1:76352964-76352983 Msa0044720:CDS 40.0%
ATGATGATTGCTTGCTTCCA+TGG + chr1_1:76353017-76353036 Msa0044720:CDS 40.0%
GAGTTATGCAATTCAAGCCA+TGG - chr1_1:76353037-76353056 None:intergenic 40.0%
GCAATTCATGTCGACAAACA+GGG - chr1_1:76353063-76353082 None:intergenic 40.0%
! TGATGCTGATTATGAGAACC+GGG + chr1_1:76353090-76353109 Msa0044720:CDS 40.0%
! ATTCTGAAAGTTCTGTGGAC+AGG - chr1_1:76353223-76353242 None:intergenic 40.0%
! ATATCTCTGCGGTATCCTTT+TGG + chr1_1:76353241-76353260 Msa0044720:CDS 40.0%
GTGAAAGGGGATTTGGAAAT+AGG + chr1_1:76353290-76353309 Msa0044720:CDS 40.0%
TGGAAGCAAATTGGGCAGAA+AGG - chr1_1:76352461-76352480 None:intergenic 45.0%
! TTCTGCCCAATTTGCTTCCA+AGG + chr1_1:76352461-76352480 Msa0044720:CDS 45.0%
TTAGGGTTAGGGTTAGGTTC+GGG - chr1_1:76352509-76352528 None:intergenic 45.0%
GTTAGGGTTAGGGTTAGGTT+CGG - chr1_1:76352510-76352529 None:intergenic 45.0%
ATCACGTTAGGGTTAGGGTT+AGG - chr1_1:76352515-76352534 None:intergenic 45.0%
CGGAAAATCACGTTAGGGTT+AGG - chr1_1:76352521-76352540 None:intergenic 45.0%
!! GATCGTGATGATGGTTGAAG+CGG - chr1_1:76352541-76352560 None:intergenic 45.0%
! AGTAATGGGAGAAGAGCGAA+GGG - chr1_1:76352599-76352618 None:intergenic 45.0%
! GATTCTGAAGGAAAGCGAAG+GGG - chr1_1:76352673-76352692 None:intergenic 45.0%
CATCCTTCTGAATCTGAACC+AGG + chr1_1:76352743-76352762 Msa0044720:CDS 45.0%
AACCCTGGTTCAGATTCAGA+AGG - chr1_1:76352749-76352768 None:intergenic 45.0%
CTGAATCTGAACCAGGGTTT+CGG + chr1_1:76352750-76352769 Msa0044720:CDS 45.0%
TGAATCTGAACCAGGGTTTC+GGG + chr1_1:76352751-76352770 Msa0044720:CDS 45.0%
GAAGTAATCGCCAAGGTTAG+AGG - chr1_1:76352780-76352799 None:intergenic 45.0%
AACCTTGGCGATTACTTCCT+CGG + chr1_1:76352782-76352801 Msa0044720:CDS 45.0%
! GCAATTGATTCAGCAGCTTG+CGG + chr1_1:76352817-76352836 Msa0044720:CDS 45.0%
GGCTGTTAAGAATCTTCCGA+CGG + chr1_1:76352883-76352902 Msa0044720:CDS 45.0%
GGCAATTCATGTCGACAAAC+AGG - chr1_1:76353064-76353083 None:intergenic 45.0%
! GATGCTGATTATGAGAACCG+GGG + chr1_1:76353091-76353110 Msa0044720:CDS 45.0%
TGATTATGAGAACCGGGGTA+GGG + chr1_1:76353096-76353115 Msa0044720:CDS 45.0%
GCAGAGTCATCTGAACCAAA+AGG - chr1_1:76353259-76353278 None:intergenic 45.0%
TGGAAGCAAATTGGGCAGAA+AGG - chr1_1:76352461-76352480 None:intergenic 45.0%
! TTCTGCCCAATTTGCTTCCA+AGG + chr1_1:76352461-76352480 Msa0044720:CDS 45.0%
TTAGGGTTAGGGTTAGGTTC+GGG - chr1_1:76352509-76352528 None:intergenic 45.0%
GTTAGGGTTAGGGTTAGGTT+CGG - chr1_1:76352510-76352529 None:intergenic 45.0%
ATCACGTTAGGGTTAGGGTT+AGG - chr1_1:76352515-76352534 None:intergenic 45.0%
CGGAAAATCACGTTAGGGTT+AGG - chr1_1:76352521-76352540 None:intergenic 45.0%
!! GATCGTGATGATGGTTGAAG+CGG - chr1_1:76352541-76352560 None:intergenic 45.0%
! AGTAATGGGAGAAGAGCGAA+GGG - chr1_1:76352599-76352618 None:intergenic 45.0%
! GATTCTGAAGGAAAGCGAAG+GGG - chr1_1:76352673-76352692 None:intergenic 45.0%
CATCCTTCTGAATCTGAACC+AGG + chr1_1:76352743-76352762 Msa0044720:CDS 45.0%
AACCCTGGTTCAGATTCAGA+AGG - chr1_1:76352749-76352768 None:intergenic 45.0%
CTGAATCTGAACCAGGGTTT+CGG + chr1_1:76352750-76352769 Msa0044720:CDS 45.0%
TGAATCTGAACCAGGGTTTC+GGG + chr1_1:76352751-76352770 Msa0044720:CDS 45.0%
GAAGTAATCGCCAAGGTTAG+AGG - chr1_1:76352780-76352799 None:intergenic 45.0%
AACCTTGGCGATTACTTCCT+CGG + chr1_1:76352782-76352801 Msa0044720:CDS 45.0%
! GCAATTGATTCAGCAGCTTG+CGG + chr1_1:76352817-76352836 Msa0044720:CDS 45.0%
GGCTGTTAAGAATCTTCCGA+CGG + chr1_1:76352883-76352902 Msa0044720:CDS 45.0%
GGCAATTCATGTCGACAAAC+AGG - chr1_1:76353064-76353083 None:intergenic 45.0%
! GATGCTGATTATGAGAACCG+GGG + chr1_1:76353091-76353110 Msa0044720:CDS 45.0%
TGATTATGAGAACCGGGGTA+GGG + chr1_1:76353096-76353115 Msa0044720:CDS 45.0%
GCAGAGTCATCTGAACCAAA+AGG - chr1_1:76353259-76353278 None:intergenic 45.0%
TTCAGAATCATCGTCGGTGC+AGG - chr1_1:76352438-76352457 None:intergenic 50.0%
CGGAGGAATGATCGTGATGA+TGG - chr1_1:76352550-76352569 None:intergenic 50.0%
AGAAGAGCGAAGGGATGGAA+TGG - chr1_1:76352590-76352609 None:intergenic 50.0%
! GAGTAATGGGAGAAGAGCGA+AGG - chr1_1:76352600-76352619 None:intergenic 50.0%
GAAACTATCGGAATCGGGTC+GGG - chr1_1:76352648-76352667 None:intergenic 50.0%
CGAAACTATCGGAATCGGGT+CGG - chr1_1:76352649-76352668 None:intergenic 50.0%
GGGTCGAAACTATCGGAATC+GGG - chr1_1:76352653-76352672 None:intergenic 50.0%
GGGGTCGAAACTATCGGAAT+CGG - chr1_1:76352654-76352673 None:intergenic 50.0%
AGCGAAGGGGTCGAAACTAT+CGG - chr1_1:76352660-76352679 None:intergenic 50.0%
GGCCGTTGAGATGATTCTGA+AGG - chr1_1:76352685-76352704 None:intergenic 50.0%
!! TTTCGGGTTCCCTCTAACCT+TGG + chr1_1:76352767-76352786 Msa0044720:CDS 50.0%
TTAACAGCCTCTTTCGACGC+CGG - chr1_1:76352872-76352891 None:intergenic 50.0%
CTGATTATGAGAACCGGGGT+AGG + chr1_1:76353095-76353114 Msa0044720:CDS 50.0%
!! GATGGGTTGAGGTCTGTTGT+TGG + chr1_1:76353133-76353152 Msa0044720:CDS 50.0%
!! GTTGGTGGTAACAGTACCGT+TGG + chr1_1:76353151-76353170 Msa0044720:CDS 50.0%
TGGTTCAGATGACTCTGCTC+AGG + chr1_1:76353261-76353280 Msa0044720:CDS 50.0%
TGCTCAGGACTCTGGTGAAA+GGG + chr1_1:76353276-76353295 Msa0044720:CDS 50.0%
GACTCTGGTGAAAGGGGATT+TGG + chr1_1:76353283-76353302 Msa0044720:CDS 50.0%
TTCAGAATCATCGTCGGTGC+AGG - chr1_1:76352438-76352457 None:intergenic 50.0%
CGGAGGAATGATCGTGATGA+TGG - chr1_1:76352550-76352569 None:intergenic 50.0%
AGAAGAGCGAAGGGATGGAA+TGG - chr1_1:76352590-76352609 None:intergenic 50.0%
! GAGTAATGGGAGAAGAGCGA+AGG - chr1_1:76352600-76352619 None:intergenic 50.0%
GAAACTATCGGAATCGGGTC+GGG - chr1_1:76352648-76352667 None:intergenic 50.0%
CGAAACTATCGGAATCGGGT+CGG - chr1_1:76352649-76352668 None:intergenic 50.0%
GGGTCGAAACTATCGGAATC+GGG - chr1_1:76352653-76352672 None:intergenic 50.0%
GGGGTCGAAACTATCGGAAT+CGG - chr1_1:76352654-76352673 None:intergenic 50.0%
AGCGAAGGGGTCGAAACTAT+CGG - chr1_1:76352660-76352679 None:intergenic 50.0%
GGCCGTTGAGATGATTCTGA+AGG - chr1_1:76352685-76352704 None:intergenic 50.0%
!! TTTCGGGTTCCCTCTAACCT+TGG + chr1_1:76352767-76352786 Msa0044720:CDS 50.0%
TTAACAGCCTCTTTCGACGC+CGG - chr1_1:76352872-76352891 None:intergenic 50.0%
CTGATTATGAGAACCGGGGT+AGG + chr1_1:76353095-76353114 Msa0044720:CDS 50.0%
!! GATGGGTTGAGGTCTGTTGT+TGG + chr1_1:76353133-76353152 Msa0044720:CDS 50.0%
!! GTTGGTGGTAACAGTACCGT+TGG + chr1_1:76353151-76353170 Msa0044720:CDS 50.0%
TGGTTCAGATGACTCTGCTC+AGG + chr1_1:76353261-76353280 Msa0044720:CDS 50.0%
TGCTCAGGACTCTGGTGAAA+GGG + chr1_1:76353276-76353295 Msa0044720:CDS 50.0%
GACTCTGGTGAAAGGGGATT+TGG + chr1_1:76353283-76353302 Msa0044720:CDS 50.0%
TCTTCTGCCACGTGTGCAGT+CGG + chr1_1:76352405-76352424 Msa0044720:CDS 55.0%
TAACTCTCCGACTGCACACG+TGG - chr1_1:76352415-76352434 None:intergenic 55.0%
ATGGGAGAAGAGCGAAGGGA+TGG - chr1_1:76352595-76352614 None:intergenic 55.0%
TTAGAGGGAACCCGAAACCC+TGG - chr1_1:76352764-76352783 None:intergenic 55.0%
CACCGAGGAAGTAATCGCCA+AGG - chr1_1:76352787-76352806 None:intergenic 55.0%
GCATCATCAACGGTCACCGT+CGG - chr1_1:76352902-76352921 None:intergenic 55.0%
TATGAGAACCGGGGTAGGGA+TGG + chr1_1:76353100-76353119 Msa0044720:CDS 55.0%
AACCGGGGTAGGGATGGTAA+CGG + chr1_1:76353106-76353125 Msa0044720:CDS 55.0%
GGGTTGAGGTCTGTTGTTGG+TGG + chr1_1:76353136-76353155 Msa0044720:CDS 55.0%
GGTGGTAACAGTACCGTTGG+TGG + chr1_1:76353154-76353173 Msa0044720:CDS 55.0%
! GGTAACAGTACCGTTGGTGG+TGG + chr1_1:76353157-76353176 Msa0044720:CDS 55.0%
!! AACAGTACCGTTGGTGGTGG+TGG + chr1_1:76353160-76353179 Msa0044720:CDS 55.0%
GATGACTCTGCTCAGGACTC+TGG + chr1_1:76353268-76353287 Msa0044720:CDS 55.0%
CTGCTCAGGACTCTGGTGAA+AGG + chr1_1:76353275-76353294 Msa0044720:CDS 55.0%
GCTCAGGACTCTGGTGAAAG+GGG + chr1_1:76353277-76353296 Msa0044720:CDS 55.0%
TCTTCTGCCACGTGTGCAGT+CGG + chr1_1:76352405-76352424 Msa0044720:CDS 55.0%
TAACTCTCCGACTGCACACG+TGG - chr1_1:76352415-76352434 None:intergenic 55.0%
ATGGGAGAAGAGCGAAGGGA+TGG - chr1_1:76352595-76352614 None:intergenic 55.0%
TTAGAGGGAACCCGAAACCC+TGG - chr1_1:76352764-76352783 None:intergenic 55.0%
CACCGAGGAAGTAATCGCCA+AGG - chr1_1:76352787-76352806 None:intergenic 55.0%
GCATCATCAACGGTCACCGT+CGG - chr1_1:76352902-76352921 None:intergenic 55.0%
TATGAGAACCGGGGTAGGGA+TGG + chr1_1:76353100-76353119 Msa0044720:CDS 55.0%
AACCGGGGTAGGGATGGTAA+CGG + chr1_1:76353106-76353125 Msa0044720:CDS 55.0%
GGGTTGAGGTCTGTTGTTGG+TGG + chr1_1:76353136-76353155 Msa0044720:CDS 55.0%
GGTGGTAACAGTACCGTTGG+TGG + chr1_1:76353154-76353173 Msa0044720:CDS 55.0%
! GGTAACAGTACCGTTGGTGG+TGG + chr1_1:76353157-76353176 Msa0044720:CDS 55.0%
!! AACAGTACCGTTGGTGGTGG+TGG + chr1_1:76353160-76353179 Msa0044720:CDS 55.0%
GATGACTCTGCTCAGGACTC+TGG + chr1_1:76353268-76353287 Msa0044720:CDS 55.0%
CTGCTCAGGACTCTGGTGAA+AGG + chr1_1:76353275-76353294 Msa0044720:CDS 55.0%
GCTCAGGACTCTGGTGAAAG+GGG + chr1_1:76353277-76353296 Msa0044720:CDS 55.0%
ATGTCTTCTGGCGGCGATGG+CGG + chr1_1:76352359-76352378 Msa0044720:CDS 60.0%
ATCGGGTCGGGTCCTGGAAA+CGG - chr1_1:76352636-76352655 None:intergenic 60.0%
TGTTTGCACCGTCGGCGTGA+AGG - chr1_1:76352706-76352725 None:intergenic 60.0%
! GGCGATTACTTCCTCGGTGC+TGG + chr1_1:76352788-76352807 Msa0044720:CDS 60.0%
ATTGCTCGAAGCCAGCACCG+AGG - chr1_1:76352802-76352821 None:intergenic 60.0%
GGCGGTGTGCCGTAACGATT+CGG - chr1_1:76352851-76352870 None:intergenic 60.0%
GAATCGTTACGGCACACCGC+CGG + chr1_1:76352850-76352869 Msa0044720:CDS 60.0%
CACCGTTACCATCCCTACCC+CGG - chr1_1:76353111-76353130 None:intergenic 60.0%
!! AGGGATGGTAACGGTGGCGA+TGG + chr1_1:76353115-76353134 Msa0044720:CDS 60.0%
!! GGGATGGTAACGGTGGCGAT+GGG + chr1_1:76353116-76353135 Msa0044720:CDS 60.0%
!! GTAACGGTGGCGATGGGTTG+AGG + chr1_1:76353122-76353141 Msa0044720:CDS 60.0%
!! AGTACCGTTGGTGGTGGTGG+TGG + chr1_1:76353163-76353182 Msa0044720:CDS 60.0%
ACCACCACCACCACCACCAA+CGG - chr1_1:76353170-76353189 None:intergenic 60.0%
ATGTCTTCTGGCGGCGATGG+CGG + chr1_1:76352359-76352378 Msa0044720:CDS 60.0%
ATCGGGTCGGGTCCTGGAAA+CGG - chr1_1:76352636-76352655 None:intergenic 60.0%
TGTTTGCACCGTCGGCGTGA+AGG - chr1_1:76352706-76352725 None:intergenic 60.0%
! GGCGATTACTTCCTCGGTGC+TGG + chr1_1:76352788-76352807 Msa0044720:CDS 60.0%
ATTGCTCGAAGCCAGCACCG+AGG - chr1_1:76352802-76352821 None:intergenic 60.0%
GGCGGTGTGCCGTAACGATT+CGG - chr1_1:76352851-76352870 None:intergenic 60.0%
GAATCGTTACGGCACACCGC+CGG + chr1_1:76352850-76352869 Msa0044720:CDS 60.0%
CACCGTTACCATCCCTACCC+CGG - chr1_1:76353111-76353130 None:intergenic 60.0%
!! AGGGATGGTAACGGTGGCGA+TGG + chr1_1:76353115-76353134 Msa0044720:CDS 60.0%
!! GGGATGGTAACGGTGGCGAT+GGG + chr1_1:76353116-76353135 Msa0044720:CDS 60.0%
!! GTAACGGTGGCGATGGGTTG+AGG + chr1_1:76353122-76353141 Msa0044720:CDS 60.0%
!! AGTACCGTTGGTGGTGGTGG+TGG + chr1_1:76353163-76353182 Msa0044720:CDS 60.0%
ACCACCACCACCACCACCAA+CGG - chr1_1:76353170-76353189 None:intergenic 60.0%
ATCGGAATCGGGTCGGGTCC+TGG - chr1_1:76352642-76352661 None:intergenic 65.0%
CTCAACGGCCTTCACGCCGA+CGG + chr1_1:76352695-76352714 Msa0044720:CDS 65.0%
ACAGCCTCTTTCGACGCCGG+CGG - chr1_1:76352869-76352888 None:intergenic 65.0%
!! CGGGGTAGGGATGGTAACGG+TGG + chr1_1:76353109-76353128 Msa0044720:CDS 65.0%
!! ACCGTTGGTGGTGGTGGTGG+TGG + chr1_1:76353166-76353185 Msa0044720:CDS 65.0%
!! GTTGGTGGTGGTGGTGGTGG+TGG + chr1_1:76353169-76353188 Msa0044720:CDS 65.0%
!! GGTGGTGGTGGTGGTAGCAG+TGG + chr1_1:76353178-76353197 Msa0044720:CDS 65.0%
!! GGTGGTGGTGGTAGCAGTGG+TGG + chr1_1:76353181-76353200 Msa0044720:CDS 65.0%
! GGTGGTGGTAGCAGTGGTGG+TGG + chr1_1:76353184-76353203 Msa0044720:CDS 65.0%
!! GGTGGTAGCAGTGGTGGTGG+AGG + chr1_1:76353187-76353206 Msa0044720:CDS 65.0%
!! GGTAGCAGTGGTGGTGGAGG+AGG + chr1_1:76353190-76353209 Msa0044720:CDS 65.0%
ATCGGAATCGGGTCGGGTCC+TGG - chr1_1:76352642-76352661 None:intergenic 65.0%
CTCAACGGCCTTCACGCCGA+CGG + chr1_1:76352695-76352714 Msa0044720:CDS 65.0%
ACAGCCTCTTTCGACGCCGG+CGG - chr1_1:76352869-76352888 None:intergenic 65.0%
!! CGGGGTAGGGATGGTAACGG+TGG + chr1_1:76353109-76353128 Msa0044720:CDS 65.0%
!! ACCGTTGGTGGTGGTGGTGG+TGG + chr1_1:76353166-76353185 Msa0044720:CDS 65.0%
!! GTTGGTGGTGGTGGTGGTGG+TGG + chr1_1:76353169-76353188 Msa0044720:CDS 65.0%
!! GGTGGTGGTGGTGGTAGCAG+TGG + chr1_1:76353178-76353197 Msa0044720:CDS 65.0%
!! GGTGGTGGTGGTAGCAGTGG+TGG + chr1_1:76353181-76353200 Msa0044720:CDS 65.0%
! GGTGGTGGTAGCAGTGGTGG+TGG + chr1_1:76353184-76353203 Msa0044720:CDS 65.0%
!! GGTGGTAGCAGTGGTGGTGG+AGG + chr1_1:76353187-76353206 Msa0044720:CDS 65.0%
!! GGTAGCAGTGGTGGTGGAGG+AGG + chr1_1:76353190-76353209 Msa0044720:CDS 65.0%
! TCTTCTGGCGGCGATGGCGG+TGG + chr1_1:76352362-76352381 Msa0044720:CDS 70.0%
! CACACCGCCGGCGTCGAAAG+AGG + chr1_1:76352862-76352881 Msa0044720:CDS 70.0%
! TCTTCTGGCGGCGATGGCGG+TGG + chr1_1:76352362-76352381 Msa0044720:CDS 70.0%
! CACACCGCCGGCGTCGAAAG+AGG + chr1_1:76352862-76352881 Msa0044720:CDS 70.0%
! TCTGGCGGCGATGGCGGTGG+TGG + chr1_1:76352365-76352384 Msa0044720:CDS 75.0%
!! GATGGCGGTGGTGGCGGTGG+AGG + chr1_1:76352374-76352393 Msa0044720:CDS 75.0%
! TCTGGCGGCGATGGCGGTGG+TGG + chr1_1:76352365-76352384 Msa0044720:CDS 75.0%
!! GATGGCGGTGGTGGCGGTGG+AGG + chr1_1:76352374-76352393 Msa0044720:CDS 75.0%
!! GGCGGCGATGGCGGTGGTGG+CGG + chr1_1:76352368-76352387 Msa0044720:CDS 80.0%
!!! GGCGATGGCGGTGGTGGCGG+TGG + chr1_1:76352371-76352390 Msa0044720:CDS 80.0%
!! GGCGGCGATGGCGGTGGTGG+CGG + chr1_1:76352368-76352387 Msa0044720:CDS 80.0%
!!! GGCGATGGCGGTGGTGGCGG+TGG + chr1_1:76352371-76352390 Msa0044720:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 76352359 76353330 76352359 ID=Msa0044720;Name=Msa0044720
chr1_1 mRNA 76352359 76353330 76352359 ID=Msa0044720-mRNA-1;Parent=Msa0044720;Name=Msa0044720-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|323
chr1_1 exon 76352359 76353330 76352359 ID=Msa0044720-mRNA-1:exon:25916;Parent=Msa0044720-mRNA-1
chr1_1 CDS 76352359 76353330 76352359 ID=Msa0044720-mRNA-1:cds;Parent=Msa0044720-mRNA-1
Gene Sequence

>Msa0044720

ATGTCTTCTGGCGGCGATGGCGGTGGTGGCGGTGGAGGTAAGCTTTTCTTCTGCCACGTGTGCAGTCGGAGAGTTACCTGCACCGACGATGATTCTGAACCTTTCTGCCCAATTTGCTTCCAAGGTTTTCTCGAAGAATGTGAACAACCCGAACCTAACCCTAACCCTAACGTGATTTTCCGCTTCAACCATCATCACGATCATTCCTCCGATTCAGATTCCGAATTTCCATTCCATCCCTTCGCTCTTCTCCCATTACTCCTTAATTCTGCTTCCGTTTCCAGGACCCGACCCGATTCCGATAGTTTCGACCCCTTCGCTTTCCTTCAGAATCATCTCAACGGCCTTCACGCCGACGGTGCAAACATTCAATTCGAGATCAATCATCCTTCTGAATCTGAACCAGGGTTTCGGGTTCCCTCTAACCTTGGCGATTACTTCCTCGGTGCTGGCTTCGAGCAATTGATTCAGCAGCTTGCGGAGAATGATCCGAATCGTTACGGCACACCGCCGGCGTCGAAAGAGGCTGTTAAGAATCTTCCGACGGTGACCGTTGATGATGCGTTGTTGAACTCGGAGTTGAATCAATGTGCTGTTTGTCAGGATGAGTTTGAGAAAGGTACACAGGTGAAGCAAATGCCTTGTAAGCATGTTTATCATGATGATTGCTTGCTTCCATGGCTTGAATTGCATAACTCTTGCCCTGTTTGTCGACATGAATTGCCTACTGATGATGCTGATTATGAGAACCGGGGTAGGGATGGTAACGGTGGCGATGGGTTGAGGTCTGTTGTTGGTGGTAACAGTACCGTTGGTGGTGGTGGTGGTGGTGGTAGCAGTGGTGGTGGAGGAGGAAATAGACCTGTCCACAGAACTTTCAGAATATCTCTGCGGTATCCTTTTGGTTCAGATGACTCTGCTCAGGACTCTGGTGAAAGGGGATTTGGAAATAGGCAAGAAGATTTGGATTGA
Protein sequence

>Msa0044720

MSSGGDGGGGGGGKLFFCHVCSRRVTCTDDDSEPFCPICFQGFLEECEQPEPNPNPNVIFRFNHHHDHSSDSDSEFPFHPFALLPLLLNSASVSRTRPDSDSFDPFAFLQNHLNGLHADGANIQFEINHPSESEPGFRVPSNLGDYFLGAGFEQLIQQLAENDPNRYGTPPASKEAVKNLPTVTVDDALLNSELNQCAVCQDEFEKGTQVKQMPCKHVYHDDCLLPWLELHNSCPVCRHELPTDDADYENRGRDGNGGDGLRSVVGGNSTVGGGGGGGSSGGGGGNRPVHRTFRISLRYPFGSDDSAQDSGERGFGNRQEDLD*