AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0138990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138990 MtrunA17_Chr1g0194181 100.000 57 0 0 36 92 6 62 3.19e-35 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138990 AT1G02475.1 71.591 88 25 0 3 90 131 218 1.80e-40 133
Msa0138990 AT4G01883.1 61.111 90 35 0 3 92 133 222 1.99e-33 115
Msa0138990 AT1G02470.1 56.818 88 38 0 3 90 132 219 2.76e-33 114
Msa0138990 AT1G02470.2 59.375 64 26 0 3 66 132 195 7.86e-23 87.4
Msa0138990 AT4G01883.2 61.538 65 25 0 3 67 133 197 6.15e-22 85.1
Msa0138990 AT4G01883.3 58.824 51 21 0 3 53 133 183 1.73e-15 68.2

Find 106 sgRNAs with CRISPR-Local

Find 907 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAATCACATAAATTATTT+TGG 0.155684 1_3:-72206861 None:intergenic
TTATTTCATATTCCTCTAAT+AGG 0.198318 1_3:+72212642 Msa0138990:five_prime_UTR
AATGTTGTATATTTCTTAAT+TGG 0.238076 1_3:+72212746 Msa0138990:five_prime_UTR
TTAAGTTGCTTATCCAAATA+TGG 0.248820 1_3:+72212617 Msa0138990:five_prime_UTR
CACCTTAACATTGGAAATAA+AGG 0.254920 1_3:-72212941 None:intergenic
ATATGAAATAAGGCCATATT+TGG 0.258178 1_3:-72212630 None:intergenic
GTGCCACAAGGTTGGGATTC+CGG 0.262628 1_3:-72217959 None:intergenic
GATTGAATTTCATAAAGATT+TGG 0.263236 1_3:+72217803 Msa0138990:three_prime_UTR
TGCCACAAGGTTGGGATTCC+GGG 0.269934 1_3:-72217958 None:intergenic
TTAATTCCTCACGGCTCTTA+TGG 0.271438 1_3:+72217878 Msa0138990:three_prime_UTR
CGAAAAGAAGCAAAAGTATC+AGG 0.296065 1_3:-72213506 None:intergenic
GAAATAAAGGGCATCCATTC+CGG 0.309685 1_3:-72212928 None:intergenic
TATTTCATATTCCTCTAATA+GGG 0.313517 1_3:+72212643 Msa0138990:five_prime_UTR
GGTATGGGCACATGACTTAT+AGG 0.324663 1_3:-72218131 None:intergenic
GCCCTTTATTTCCAATGTTA+AGG 0.325527 1_3:+72212939 Msa0138990:five_prime_UTR
AGGCATGAAGAAGGACCTTT+TGG 0.331509 1_3:-72216387 None:intergenic
ATTGAATTTCATAAAGATTT+GGG 0.337700 1_3:+72217804 Msa0138990:three_prime_UTR
TATTAGAGGAATATGAAATA+AGG 0.360118 1_3:-72212640 None:intergenic
GTCAGAATATTGAGTTCTCT+TGG 0.369456 1_3:+72213451 Msa0138990:five_prime_UTR
TATGAAATTCAATCAGTGTT+TGG 0.377594 1_3:-72217794 None:intergenic
GAAGCTTCTAGAAGTAAAAT+TGG 0.382494 1_3:-72207039 None:intergenic
GAAAATCCATTGGCGATCTC+TGG 0.391451 1_3:+72213597 Msa0138990:CDS
TTCAGCAGTGCCACAAGGTT+GGG 0.392936 1_3:-72217966 None:intergenic
TTAAGTAAACCTTCAAGAAA+TGG 0.393153 1_3:-72217669 None:intergenic
AAAATGGAGCCCTGAAAATC+AGG 0.393353 1_3:-72217742 None:intergenic
TTCCCCTGTCATGGAGTGGC+AGG 0.393458 1_3:+72207157 Msa0138990:five_prime_UTR
CTCTGGATGGTCTTCCCAAC+AGG 0.395898 1_3:+72213614 Msa0138990:CDS
TGCGACAGGTCAGGTTTGTC+TGG 0.396361 1_3:-72213402 None:intergenic
CTAAAACGAATGGAACAAAA+TGG 0.404476 1_3:-72212691 None:intergenic
AAAATAATATTTCCGAATGC+AGG 0.404879 1_3:+72212839 Msa0138990:five_prime_UTR
AGGTTTACTTAAACGTGGTT+TGG 0.410150 1_3:+72217680 Msa0138990:CDS
AAATAAAGGGCATCCATTCC+GGG 0.416206 1_3:-72212927 None:intergenic
AAATTACAATACAGCTGGTA+TGG 0.422046 1_3:-72218147 None:intergenic
TCCTTGAAGTATAAGGCATT+TGG 0.430828 1_3:+72213429 Msa0138990:five_prime_UTR
TTATCATGCCAGTGTTGGTT+AGG 0.432396 1_3:+72217832 Msa0138990:three_prime_UTR
ACCAAATGCCTTATACTTCA+AGG 0.433774 1_3:-72213430 None:intergenic
TTCCGAATGCAGGGTTAAGA+TGG 0.435808 1_3:+72212849 Msa0138990:five_prime_UTR
TGCCTTTGTCAAACCATCTC+AGG 0.440630 1_3:+72218097 Msa0138990:three_prime_UTR
CTCCATCTTAACCCTGCATT+CGG 0.449371 1_3:-72212851 None:intergenic
GAAATACTCCAACGTCTTGA+AGG 0.449380 1_3:-72218018 None:intergenic
AAGGACCATTGCGACAGGTC+AGG 0.449994 1_3:-72213411 None:intergenic
GCAATGGTCCTTGAAGTATA+AGG 0.452028 1_3:+72213422 Msa0138990:five_prime_UTR
TTGGAAGAGAGTGAAGTTGA+GGG 0.452562 1_3:-72207062 None:intergenic
CAATCCTGCCACTCCATGAC+AGG 0.454346 1_3:-72207161 None:intergenic
ACCTTAACATTGGAAATAAA+GGG 0.454817 1_3:-72212940 None:intergenic
GCCCTTGTCAGTTACCTGTT+GGG 0.457466 1_3:-72213628 None:intergenic
GCACTGCAACCATTTCTTGA+AGG 0.468212 1_3:+72217660 Msa0138990:CDS
TCATGCCAGTGTTGGTTAGG+TGG 0.476834 1_3:+72217835 Msa0138990:three_prime_UTR
CAATCATATGCTACAGAGAT+CGG 0.479919 1_3:-72212883 None:intergenic
CACGGCTCTTATGGAAATCA+TGG 0.485343 1_3:+72217887 Msa0138990:three_prime_UTR
TTTCAGCAGTGCCACAAGGT+TGG 0.499342 1_3:-72217967 None:intergenic
TGAGATGGTTTGACAAAGGC+AGG 0.502974 1_3:-72218095 None:intergenic
ATTGGAAGAGAGTGAAGTTG+AGG 0.504072 1_3:-72207063 None:intergenic
CTAGCATTGCGATTCAAAGA+TGG 0.510418 1_3:-72207002 None:intergenic
ATGTGATTCACAATTTCATA+CGG 0.520319 1_3:+72206873 Msa0138990:five_prime_UTR
TTCTGATCGTGAAGCCATCC+CGG 0.524092 1_3:+72212909 Msa0138990:five_prime_UTR
TACGGTTATCATGCCAGTGT+TGG 0.537477 1_3:+72217827 Msa0138990:three_prime_UTR
AAATAATATTTCCGAATGCA+GGG 0.537816 1_3:+72212840 Msa0138990:five_prime_UTR
AATCATATGCTACAGAGATC+GGG 0.541146 1_3:-72212882 None:intergenic
GAAAGTAGGAAGCTGTGGTT+GGG 0.541318 1_3:-72212809 None:intergenic
AGAGTACTTACCGATGCCAC+TGG 0.543027 1_3:-72216896 None:intergenic
TGAAAGTAGGAAGCTGTGGT+TGG 0.543922 1_3:-72212810 None:intergenic
CGTCGCGGTCGGAGAGCAGA+AGG 0.545470 1_3:+72206900 Msa0138990:five_prime_UTR
GGAGCTTCTTAGTCCTGAGA+TGG 0.548161 1_3:-72218110 None:intergenic
TTGGCTTGCTCGTAATATGC+AGG 0.548555 1_3:+72213470 Msa0138990:five_prime_UTR
TCGTCTAATTCTAAAACGAA+TGG 0.551000 1_3:-72212701 None:intergenic
TCATATTCCTCTAATAGGGA+TGG 0.554439 1_3:+72212647 Msa0138990:five_prime_UTR
ACAGCTGACAGTCTCATATG+AGG 0.555155 1_3:+72216856 Msa0138990:intron
CGAATGCAGGGTTAAGATGG+AGG 0.555585 1_3:+72212852 Msa0138990:five_prime_UTR
GCTGTGCGATTCTATCCAAA+AGG 0.563786 1_3:+72216372 Msa0138990:CDS
ATCCATTGGCGATCTCTGGA+TGG 0.567929 1_3:+72213601 Msa0138990:CDS
CTCCAAATCAGAAAATCCAT+TGG 0.568507 1_3:+72213587 Msa0138990:CDS
ATTTGGAGTGGGCTGCAAGA+AGG 0.569657 1_3:-72213572 None:intergenic
ATTTCATAAAGATTTGGGTA+CGG 0.572664 1_3:+72217809 Msa0138990:three_prime_UTR
TGTACAAATTACAATACAGC+TGG 0.574526 1_3:-72218152 None:intergenic
AATTACAATACAGCTGGTAT+GGG 0.574781 1_3:-72218146 None:intergenic
ATCGTGAAGCCATCCCGGAA+TGG 0.574790 1_3:+72212914 Msa0138990:five_prime_UTR
ACTTCTACAAGGCATGAAGA+AGG 0.576876 1_3:-72216396 None:intergenic
TGGAAGAGAGTGAAGTTGAG+GGG 0.576892 1_3:-72207061 None:intergenic
GAGTCTGAAGAAGAAGCGAT+TGG 0.577061 1_3:-72207081 None:intergenic
TGTCTTTCTATACAATAATG+AGG 0.578333 1_3:+72218178 Msa0138990:three_prime_UTR
TCATTGAAAGTAGGAAGCTG+TGG 0.581390 1_3:-72212814 None:intergenic
AAATACTCCAACGTCTTGAA+GGG 0.584303 1_3:-72218017 None:intergenic
ACTTCAAGGACCATTGCGAC+AGG 0.589808 1_3:-72213416 None:intergenic
GACCATCCAGAGATCGCCAA+TGG 0.590298 1_3:-72213603 None:intergenic
GAGCAAGCACACCTTAACAT+TGG 0.591611 1_3:-72212950 None:intergenic
TAAAATGCCTTACTTCTACA+AGG 0.595038 1_3:-72216407 None:intergenic
AGCAGAAGATATGTTAAACC+CGG 0.595234 1_3:+72217940 Msa0138990:three_prime_UTR
ACAAACCTGACCTGTCGCAA+TGG 0.598815 1_3:+72213406 Msa0138990:five_prime_UTR
TAAATCCACCTAACCAACAC+TGG 0.598962 1_3:-72217840 None:intergenic
GCCACTGGAGCTAAAAGTTG+AGG 0.601215 1_3:-72216881 None:intergenic
CTTGAAGGTTTACTTAAACG+TGG 0.606486 1_3:+72217675 Msa0138990:CDS
GCTTCTAGAAGTAAAATTGG+CGG 0.606768 1_3:-72207036 None:intergenic
GCTTAGAAGAAGAAGTGTGA+GGG 0.616908 1_3:-72207103 None:intergenic
AAGAAGCAAAAGTATCAGGT+AGG 0.620203 1_3:-72213502 None:intergenic
AATCCTGCCACTCCATGACA+GGG 0.620352 1_3:-72207160 None:intergenic
CGCTTAGAAGAAGAAGTGTG+AGG 0.627236 1_3:-72207104 None:intergenic
GTCCTGAGATGGTTTGACAA+AGG 0.631492 1_3:-72218099 None:intergenic
CATACGGACATCGTCGCGGT+CGG 0.639263 1_3:+72206889 Msa0138990:five_prime_UTR
AACCCGGAATCCCAACCTTG+TGG 0.642268 1_3:+72217956 Msa0138990:three_prime_UTR
TAAGCTACCCTTCAAGACGT+TGG 0.644508 1_3:+72218010 Msa0138990:three_prime_UTR
AAAGGGCATCCATTCCGGGA+TGG 0.645388 1_3:-72212923 None:intergenic
CTTGAATCGATGGAAAGTTG+AGG 0.645424 1_3:-72207129 None:intergenic
ATTTCATACGGACATCGTCG+CGG 0.684145 1_3:+72206885 Msa0138990:five_prime_UTR
ATCCTGCCACTCCATGACAG+GGG 0.702823 1_3:-72207159 None:intergenic
TGATTTCCATAAGAGCCGTG+AGG 0.764444 1_3:-72217884 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAGTTTTTATGTAATTT+TGG - chr1_3:72215776-72215795 None:intergenic 10.0%
!!! AAATTTAGACACTATATTTT+GGG - chr1_3:72209296-72209315 None:intergenic 15.0%
!! AATGTTGTATATTTCTTAAT+TGG + chr1_3:72212746-72212765 Msa0138990:five_prime_UTR 15.0%
!!! TTATTTTTTTCATTGAAAGT+AGG - chr1_3:72212826-72212845 None:intergenic 15.0%
!! TTGATTAACTATATTAACTT+TGG + chr1_3:72213982-72214001 Msa0138990:intron 15.0%
!! AAATGAAACAAAATAAAGAA+GGG - chr1_3:72214049-72214068 None:intergenic 15.0%
!! ATTGCAAATGTAAATAAAAA+TGG + chr1_3:72214817-72214836 Msa0138990:intron 15.0%
!! ATAAATAACTAATATGAAAG+AGG + chr1_3:72215343-72215362 Msa0138990:intron 15.0%
!! TAAATAACTAATATGAAAGA+GGG + chr1_3:72215344-72215363 Msa0138990:intron 15.0%
!! AATGTTCTAATTAATAATCA+AGG + chr1_3:72215897-72215916 Msa0138990:intron 15.0%
!! TCATCAATGTAAAATAAAAT+AGG - chr1_3:72216453-72216472 None:intergenic 15.0%
!!! AAAACATCACATTTTTATAA+AGG - chr1_3:72216924-72216943 None:intergenic 15.0%
!!! ATATATTGATAGTATTGATA+AGG + chr1_3:72217284-72217303 Msa0138990:intron 15.0%
!!! TATATTGATAGTATTGATAA+GGG + chr1_3:72217285-72217304 Msa0138990:intron 15.0%
!!! TGTATGTTCATTTTAAAAAA+TGG - chr1_3:72217761-72217780 None:intergenic 15.0%
!! ATTGAATTTCATAAAGATTT+GGG + chr1_3:72217804-72217823 Msa0138990:three_prime_UTR 15.0%
!!! GTGAATCACATAAATTATTT+TGG - chr1_3:72206864-72206883 None:intergenic 20.0%
!!! GCTTTTCTATTTTATATGTA+TGG + chr1_3:72207212-72207231 Msa0138990:intron 20.0%
!! CTCAAATTATTATAAACCAA+TGG - chr1_3:72207515-72207534 None:intergenic 20.0%
!!! CATTGGTTTATAATAATTTG+AGG + chr1_3:72207513-72207532 Msa0138990:intron 20.0%
!!! AGGACAAGATTAATTTTATT+GGG - chr1_3:72207648-72207667 None:intergenic 20.0%
!! AAACAATTGTTCAAATTAAG+TGG - chr1_3:72208465-72208484 None:intergenic 20.0%
!!! TAATGGTTTTTCTGTTATTA+TGG - chr1_3:72208652-72208671 None:intergenic 20.0%
!!! CAAATTTAGACACTATATTT+TGG - chr1_3:72209297-72209316 None:intergenic 20.0%
!! CAAAATATAGTGTCTAAATT+TGG + chr1_3:72209295-72209314 Msa0138990:intron 20.0%
!! TTCTTAGAAAAATAAGCAAT+TGG + chr1_3:72209386-72209405 Msa0138990:intron 20.0%
!! TTATTGGTAAAAAAGAAAGA+TGG - chr1_3:72210214-72210233 None:intergenic 20.0%
!!! TTCTTTTTTACCAATAAAAC+AGG + chr1_3:72210217-72210236 Msa0138990:intron 20.0%
!!! TATTATTTTGTCAAATTGCA+GGG + chr1_3:72210501-72210520 Msa0138990:intron 20.0%
!! ATCATTAAAATTCTATGTCA+AGG - chr1_3:72210632-72210651 None:intergenic 20.0%
!!! GACATAGAATTTTAATGATA+AGG + chr1_3:72210633-72210652 Msa0138990:intron 20.0%
!! ACTAATAATAACTGATGTAA+TGG + chr1_3:72212182-72212201 Msa0138990:intron 20.0%
!! TATTAGAGGAATATGAAATA+AGG - chr1_3:72212643-72212662 None:intergenic 20.0%
!! TTATTTCATATTCCTCTAAT+AGG + chr1_3:72212642-72212661 Msa0138990:five_prime_UTR 20.0%
!! TATTTCATATTCCTCTAATA+GGG + chr1_3:72212643-72212662 Msa0138990:five_prime_UTR 20.0%
!! AATATCATAATCACTATTGT+TGG + chr1_3:72213002-72213021 Msa0138990:intron 20.0%
!! AATTGAAAATCTTTACCTTA+TGG + chr1_3:72213037-72213056 Msa0138990:intron 20.0%
!! TTAATGAAGAAATATGTACA+GGG - chr1_3:72213766-72213785 None:intergenic 20.0%
!! ATTAATGAAGAAATATGTAC+AGG - chr1_3:72213767-72213786 None:intergenic 20.0%
!! AATGAAACAAAATAAAGAAG+GGG - chr1_3:72214048-72214067 None:intergenic 20.0%
!! GAAATGAAACAAAATAAAGA+AGG - chr1_3:72214050-72214069 None:intergenic 20.0%
!! TAAATGAGTAATGAAAAAGA+AGG + chr1_3:72214151-72214170 Msa0138990:intron 20.0%
!! TATTAAGGATGTTTGTAAAA+TGG + chr1_3:72214768-72214787 Msa0138990:intron 20.0%
!! ATTAAGGATGTTTGTAAAAT+GGG + chr1_3:72214769-72214788 Msa0138990:intron 20.0%
!! AATGTAAATAAAAATGGTTC+AGG + chr1_3:72214823-72214842 Msa0138990:intron 20.0%
!! ACAAATTAACAAAATAGCTT+AGG + chr1_3:72214954-72214973 Msa0138990:intron 20.0%
!!! TTAAAACCTTTGATGATTAT+AGG - chr1_3:72215039-72215058 None:intergenic 20.0%
!! ATTTATACTGTTCAATCTAA+CGG - chr1_3:72215112-72215131 None:intergenic 20.0%
!!! TACTCTAAAATCAGTTATAT+TGG + chr1_3:72215168-72215187 Msa0138990:intron 20.0%
!!! ACTCTAAAATCAGTTATATT+GGG + chr1_3:72215169-72215188 Msa0138990:intron 20.0%
!! TTATACTGAATAAACTAGAA+TGG + chr1_3:72215220-72215239 Msa0138990:intron 20.0%
!!! TATGTTTTTGCTTTGATATT+AGG + chr1_3:72215949-72215968 Msa0138990:intron 20.0%
!! TTGATATTAGGTAAAACTTA+TGG + chr1_3:72215961-72215980 Msa0138990:intron 20.0%
!!! AGATTATGTTTTATGACAAA+CGG - chr1_3:72216161-72216180 None:intergenic 20.0%
!! TTAACTTCTAACATGAAATT+AGG + chr1_3:72216723-72216742 Msa0138990:intron 20.0%
!!! ATACCCAATTTTTCATTATT+TGG + chr1_3:72216977-72216996 Msa0138990:intron 20.0%
!!! TACCCAATTTTTCATTATTT+GGG + chr1_3:72216978-72216997 Msa0138990:intron 20.0%
!! CTTTCCTAATTTATTTGTTT+GGG + chr1_3:72217032-72217051 Msa0138990:intron 20.0%
!!! ATATTGATAGTATTGATAAG+GGG + chr1_3:72217286-72217305 Msa0138990:intron 20.0%
!!! TGTAGATAGTCTTATATTTA+AGG + chr1_3:72217347-72217366 Msa0138990:intron 20.0%
!! TTGTAAACGATCTTATATTT+AGG + chr1_3:72217382-72217401 Msa0138990:intron 20.0%
!! TGTAAACGATCTTATATTTA+GGG + chr1_3:72217383-72217402 Msa0138990:intron 20.0%
!!! TTCCAAAAAATATCAAGTTT+TGG + chr1_3:72217477-72217496 Msa0138990:intron 20.0%
!!! AACCAAAACTTGATATTTTT+TGG - chr1_3:72217482-72217501 None:intergenic 20.0%
!! GATTGAATTTCATAAAGATT+TGG + chr1_3:72217803-72217822 Msa0138990:three_prime_UTR 20.0%
!! AGGAATTAACACTTAAAAAT+GGG - chr1_3:72217867-72217886 None:intergenic 20.0%
! ATGTGATTCACAATTTCATA+CGG + chr1_3:72206873-72206892 Msa0138990:five_prime_UTR 25.0%
! TAGAAAAGCGAAAGAAAAAA+AGG - chr1_3:72207201-72207220 None:intergenic 25.0%
! TATTATAAACCAATGGAAAG+AGG - chr1_3:72207508-72207527 None:intergenic 25.0%
!! ACAAGATTAATTTTATTGGG+GGG - chr1_3:72207645-72207664 None:intergenic 25.0%
!! GACAAGATTAATTTTATTGG+GGG - chr1_3:72207646-72207665 None:intergenic 25.0%
!! GGACAAGATTAATTTTATTG+GGG - chr1_3:72207647-72207666 None:intergenic 25.0%
!! GAGGACAAGATTAATTTTAT+TGG - chr1_3:72207649-72207668 None:intergenic 25.0%
! TTGTCCTCAAGATTAAAATT+AGG + chr1_3:72207661-72207680 Msa0138990:intron 25.0%
! TGTCCTCAAGATTAAAATTA+GGG + chr1_3:72207662-72207681 Msa0138990:intron 25.0%
!!! TTACCCTAATTTTAATCTTG+AGG - chr1_3:72207668-72207687 None:intergenic 25.0%
! ATTAAAATTAGGGTAAGTCT+TGG + chr1_3:72207672-72207691 Msa0138990:intron 25.0%
!! GTCAATTTGAAATTGTGTAA+GGG - chr1_3:72207883-72207902 None:intergenic 25.0%
!! TGTCAATTTGAAATTGTGTA+AGG - chr1_3:72207884-72207903 None:intergenic 25.0%
! AAATTGACAATGTGAAATAC+CGG + chr1_3:72207895-72207914 Msa0138990:intron 25.0%
! GTGTCATATTTCAACAAAAT+AGG + chr1_3:72208225-72208244 Msa0138990:intron 25.0%
! TCATATTTCAACAAAATAGG+AGG + chr1_3:72208228-72208247 Msa0138990:intron 25.0%
! TTTGAACAATTGTTTCCAAA+AGG + chr1_3:72208470-72208489 Msa0138990:intron 25.0%
! AATGACTATACTTAGAAAGT+CGG + chr1_3:72208616-72208635 Msa0138990:intron 25.0%
! AATAACAGAAAAACCATTAG+AGG + chr1_3:72208653-72208672 Msa0138990:intron 25.0%
! ATAACAGAAAAACCATTAGA+GGG + chr1_3:72208654-72208673 Msa0138990:intron 25.0%
! TGAAACAAGATATCTTATAC+TGG - chr1_3:72208971-72208990 None:intergenic 25.0%
!! ATAAGATATCTTGTTTCACA+TGG + chr1_3:72208973-72208992 Msa0138990:intron 25.0%
! GCAATAATAGTAGATAAAAG+AGG + chr1_3:72209071-72209090 Msa0138990:intron 25.0%
! TTCTTAAGTAAAGCAGTTAA+GGG + chr1_3:72209575-72209594 Msa0138990:intron 25.0%
!!! AAACAATTGAGAGGTTTTTT+GGG - chr1_3:72209653-72209672 None:intergenic 25.0%
! TTAAATCTCAAACAATTGAG+AGG - chr1_3:72209662-72209681 None:intergenic 25.0%
!! TCTCAATTGTTTGAGATTTA+AGG + chr1_3:72209661-72209680 Msa0138990:intron 25.0%
!! CTCAATTGTTTGAGATTTAA+GGG + chr1_3:72209662-72209681 Msa0138990:intron 25.0%
! ATCCAATTTGGAAAAATAGT+GGG + chr1_3:72210084-72210103 Msa0138990:intron 25.0%
!! TTTTTCTTCACCTGTTTTAT+TGG - chr1_3:72210230-72210249 None:intergenic 25.0%
! AATAAAACAGGTGAAGAAAA+AGG + chr1_3:72210229-72210248 Msa0138990:intron 25.0%
!!! GTATTATTTTGTCAAATTGC+AGG + chr1_3:72210500-72210519 Msa0138990:intron 25.0%
! GATACCTTTATTACACTTTA+TGG - chr1_3:72210610-72210629 None:intergenic 25.0%
!! TCATTTTCTTCTTCTTCAAA+TGG - chr1_3:72211094-72211113 None:intergenic 25.0%
!!! GTGGTTGATTTGTATTTTTA+GGG + chr1_3:72211265-72211284 Msa0138990:intron 25.0%
!!! TTGATTTGTATTTTTAGGGT+TGG + chr1_3:72211269-72211288 Msa0138990:intron 25.0%
!!! TTTTGAGTTTTATGATACAC+CGG - chr1_3:72211736-72211755 None:intergenic 25.0%
!! ACTGTTTTCATAATCTATCT+TGG - chr1_3:72212494-72212513 None:intergenic 25.0%
!! TTAAGTTGCTTATCCAAATA+TGG + chr1_3:72212617-72212636 Msa0138990:five_prime_UTR 25.0%
! ATATGAAATAAGGCCATATT+TGG - chr1_3:72212633-72212652 None:intergenic 25.0%
! AAAATAATATTTCCGAATGC+AGG + chr1_3:72212839-72212858 Msa0138990:five_prime_UTR 25.0%
! AAATAATATTTCCGAATGCA+GGG + chr1_3:72212840-72212859 Msa0138990:five_prime_UTR 25.0%
! ACCTTAACATTGGAAATAAA+GGG - chr1_3:72212943-72212962 None:intergenic 25.0%
!!! ATTAGCCTTGTAATTAATCA+GGG - chr1_3:72212985-72213004 None:intergenic 25.0%
!!! TATTAGCCTTGTAATTAATC+AGG - chr1_3:72212986-72213005 None:intergenic 25.0%
!!! TTTGATTTTATGCAAAACGT+TGG + chr1_3:72213360-72213379 Msa0138990:intron 25.0%
! AATCAAATGTTTCCTAATGT+TGG - chr1_3:72213713-72213732 None:intergenic 25.0%
!!! TTTTAATTTAGCAGATCACT+TGG - chr1_3:72213887-72213906 None:intergenic 25.0%
!!! TACACTTGATAATGCTTAAT+TGG + chr1_3:72214088-72214107 Msa0138990:intron 25.0%
! CATTACTCATTTATGAGAAA+TGG - chr1_3:72214144-72214163 None:intergenic 25.0%
!!! TGTTTGATAATGTATGTTCT+AGG + chr1_3:72214310-72214329 Msa0138990:intron 25.0%
!! CCAACATTTTATCCATTTAT+AGG - chr1_3:72214451-72214470 None:intergenic 25.0%
! CCTATAAATGGATAAAATGT+TGG + chr1_3:72214448-72214467 Msa0138990:intron 25.0%
!! TAAAATGTTGGCTATATAAG+TGG + chr1_3:72214460-72214479 Msa0138990:intron 25.0%
!! AAAATGTTGGCTATATAAGT+GGG + chr1_3:72214461-72214480 Msa0138990:intron 25.0%
! TTATTCTTAGGCATAATGTT+GGG - chr1_3:72214596-72214615 None:intergenic 25.0%
! TTTATTCTTAGGCATAATGT+TGG - chr1_3:72214597-72214616 None:intergenic 25.0%
! AGCTCAAAATGTTTATTCTT+AGG - chr1_3:72214608-72214627 None:intergenic 25.0%
! TTAAGGATGTTTGTAAAATG+GGG + chr1_3:72214770-72214789 Msa0138990:intron 25.0%
! AAAAATGGTTCAGGTAAAAT+TGG + chr1_3:72214832-72214851 Msa0138990:intron 25.0%
! GGAATTATAATCAGAAAAGA+GGG - chr1_3:72214999-72215018 None:intergenic 25.0%
! GGTTGTGATAATTGAATTAA+CGG - chr1_3:72215064-72215083 None:intergenic 25.0%
! TCATAAAGATTAAGAGTTAC+AGG + chr1_3:72215246-72215265 Msa0138990:intron 25.0%
!!! ATGTAATTTTGGTTGAGTTT+AGG - chr1_3:72215765-72215784 None:intergenic 25.0%
! TAATAATCAAGGTTGCATTA+TGG + chr1_3:72215908-72215927 Msa0138990:intron 25.0%
! TTACTTTGATGCCATATTTA+GGG + chr1_3:72216508-72216527 Msa0138990:intron 25.0%
! CATATTTAGGGGAAAAAATT+GGG + chr1_3:72216520-72216539 Msa0138990:intron 25.0%
! TAGAATGAGAAACTTACAAT+TGG - chr1_3:72216555-72216574 None:intergenic 25.0%
!!! GTGATGTTTTTTACAACTTT+AGG + chr1_3:72216934-72216953 Msa0138990:intron 25.0%
! AAAAATTGGGTATTCTTTCA+CGG - chr1_3:72216970-72216989 None:intergenic 25.0%
!! ACCCAATTTTTCATTATTTG+GGG + chr1_3:72216979-72216998 Msa0138990:intron 25.0%
! TCCCCAAATAATGAAAAATT+GGG - chr1_3:72216983-72217002 None:intergenic 25.0%
!! AATTTTTCATTATTTGGGGA+CGG + chr1_3:72216983-72217002 Msa0138990:intron 25.0%
! GCTTTCCTAATTTATTTGTT+TGG + chr1_3:72217031-72217050 Msa0138990:intron 25.0%
! AGAACCCAAACAAATAAATT+AGG - chr1_3:72217039-72217058 None:intergenic 25.0%
!!! AGACTAGTTTACAAAAATCA+CGG + chr1_3:72217156-72217175 Msa0138990:intron 25.0%
! TTTGTACACAAATGACAATT+TGG - chr1_3:72217233-72217252 None:intergenic 25.0%
! TTACTAACTACTCAATTTGA+AGG + chr1_3:72217510-72217529 Msa0138990:intron 25.0%
! TTAAGTAAACCTTCAAGAAA+TGG - chr1_3:72217672-72217691 None:intergenic 25.0%
! TATGAAATTCAATCAGTGTT+TGG - chr1_3:72217797-72217816 None:intergenic 25.0%
! ATTTCATAAAGATTTGGGTA+CGG + chr1_3:72217809-72217828 Msa0138990:three_prime_UTR 25.0%
! GAGGAATTAACACTTAAAAA+TGG - chr1_3:72217868-72217887 None:intergenic 25.0%
!!! TTTTAAGTGTTAATTCCTCA+CGG + chr1_3:72217869-72217888 Msa0138990:three_prime_UTR 25.0%
! TGTCTTTCTATACAATAATG+AGG + chr1_3:72218178-72218197 Msa0138990:three_prime_UTR 25.0%
! GAAGCTTCTAGAAGTAAAAT+TGG - chr1_3:72207042-72207061 None:intergenic 30.0%
CTCTTTGTAATATATGCACA+AGG + chr1_3:72207388-72207407 Msa0138990:intron 30.0%
GAATATCTATGCTAATTGCA+AGG - chr1_3:72207482-72207501 None:intergenic 30.0%
GTTATGAATAAGGACAAAGA+AGG - chr1_3:72207612-72207631 None:intergenic 30.0%
! AAGATTAATTTTATTGGGGG+GGG - chr1_3:72207643-72207662 None:intergenic 30.0%
! CAAGATTAATTTTATTGGGG+GGG - chr1_3:72207644-72207663 None:intergenic 30.0%
AATTGACAATGTGAAATACC+GGG + chr1_3:72207896-72207915 Msa0138990:intron 30.0%
AAGTTTGCAGAATTCAAAGT+GGG - chr1_3:72208081-72208100 None:intergenic 30.0%
! AAGTATTTACTAGTGCCTTT+TGG - chr1_3:72208488-72208507 None:intergenic 30.0%
!! AAAAACTTTGGTGTCAGATA+GGG - chr1_3:72208514-72208533 None:intergenic 30.0%
!! TGAAGCATTTTTACACAATG+TGG - chr1_3:72208556-72208575 None:intergenic 30.0%
! TGGTTTTTCTGTTATTATGG+TGG - chr1_3:72208649-72208668 None:intergenic 30.0%
GAATTTCACTCTTCTATGTT+GGG - chr1_3:72208894-72208913 None:intergenic 30.0%
AGAATTTCACTCTTCTATGT+TGG - chr1_3:72208895-72208914 None:intergenic 30.0%
TAAAATAGAGTGAATGATGC+TGG + chr1_3:72208917-72208936 Msa0138990:intron 30.0%
AAAATAGAGTGAATGATGCT+GGG + chr1_3:72208918-72208937 Msa0138990:intron 30.0%
ATGAAGCCATAAAGAAAGAT+CGG + chr1_3:72209108-72209127 Msa0138990:intron 30.0%
TTTATCCCGATCTTTCTTTA+TGG - chr1_3:72209117-72209136 None:intergenic 30.0%
TTTCACCATTGAATATAAGC+CGG - chr1_3:72209165-72209184 None:intergenic 30.0%
! AAATGGCTACACAAGTTTTT+GGG - chr1_3:72209194-72209213 None:intergenic 30.0%
! AAAATGGCTACACAAGTTTT+TGG - chr1_3:72209195-72209214 None:intergenic 30.0%
TGATCAAACTATTCAAACTC+CGG - chr1_3:72209225-72209244 None:intergenic 30.0%
AACAGATCAACAAAGTTTGA+AGG - chr1_3:72209255-72209274 None:intergenic 30.0%
!! ATGAATGGCTTTGTAAAATC+AGG + chr1_3:72209467-72209486 Msa0138990:intron 30.0%
! TTAAGAAGGATGCTTTTGAA+TGG - chr1_3:72209562-72209581 None:intergenic 30.0%
CTTAACTGCTTTACTTAAGA+AGG - chr1_3:72209576-72209595 None:intergenic 30.0%
CTTCTTAAGTAAAGCAGTTA+AGG + chr1_3:72209574-72209593 Msa0138990:intron 30.0%
TCTTAAGTAAAGCAGTTAAG+GGG + chr1_3:72209576-72209595 Msa0138990:intron 30.0%
!!! CAAACAATTGAGAGGTTTTT+TGG - chr1_3:72209654-72209673 None:intergenic 30.0%
! TGTTTGAGATTTAAGGGTAT+AGG + chr1_3:72209668-72209687 Msa0138990:intron 30.0%
! ACCTTTTGGCAAATAATGAA+TGG + chr1_3:72209795-72209814 Msa0138990:intron 30.0%
TTCTAATTTACAGTCCTTCT+TGG - chr1_3:72209868-72209887 None:intergenic 30.0%
GATCCAATTTGGAAAAATAG+TGG + chr1_3:72210083-72210102 Msa0138990:intron 30.0%
ACTTAATTCCATTACTGTGA+AGG - chr1_3:72210161-72210180 None:intergenic 30.0%
TAAAAAAGAAAGATGGCTCT+TGG - chr1_3:72210207-72210226 None:intergenic 30.0%
GTTAATGAGATGTTACAACA+GGG - chr1_3:72210277-72210296 None:intergenic 30.0%
TTGTAACATCTCATTAACCA+TGG + chr1_3:72210279-72210298 Msa0138990:intron 30.0%
TATAAGGCCTTACATTAACT+GGG + chr1_3:72210335-72210354 Msa0138990:intron 30.0%
GTTTGTTCAAATCATTGTCA+GGG + chr1_3:72210476-72210495 Msa0138990:intron 30.0%
TTTGTTCAAATCATTGTCAG+GGG + chr1_3:72210477-72210496 Msa0138990:intron 30.0%
GTCACCATAAAGTGTAATAA+AGG + chr1_3:72210603-72210622 Msa0138990:intron 30.0%
!! TTTCAAGTCTTAGTTGGTAA+TGG - chr1_3:72210820-72210839 None:intergenic 30.0%
! ACTCAATTTCAAGTCTTAGT+TGG - chr1_3:72210826-72210845 None:intergenic 30.0%
TAAGACTTGAAATTGAGTAG+TGG + chr1_3:72210828-72210847 Msa0138990:intron 30.0%
TTATCCTTAAATGCACTCAA+TGG - chr1_3:72210988-72211007 None:intergenic 30.0%
TGAGTGCATTTAAGGATAAA+TGG + chr1_3:72210989-72211008 Msa0138990:intron 30.0%
! TTTTCTTCTTCTTCAAATGG+AGG - chr1_3:72211091-72211110 None:intergenic 30.0%
AAGAAGAAGAAAATGACGAT+TGG + chr1_3:72211098-72211117 Msa0138990:intron 30.0%
AGAAGAAGAAAATGACGATT+GGG + chr1_3:72211099-72211118 Msa0138990:intron 30.0%
!!! GGTGGTTGATTTGTATTTTT+AGG + chr1_3:72211264-72211283 Msa0138990:intron 30.0%
!!! AGGTTTGTTGATTTTGAATG+TGG + chr1_3:72211330-72211349 Msa0138990:intron 30.0%
! TGTTTTCCATACTCTTCATT+CGG + chr1_3:72212036-72212055 Msa0138990:intron 30.0%
! AAAGCACCAAATGTTATGAA+TGG + chr1_3:72212086-72212105 Msa0138990:intron 30.0%
TCAACTCCATTCATAACATT+TGG - chr1_3:72212095-72212114 None:intergenic 30.0%
TAATAACTGATGTAATGGCT+AGG + chr1_3:72212187-72212206 Msa0138990:intron 30.0%
TCTTATCCATTTCCTTCAAT+TGG - chr1_3:72212213-72212232 None:intergenic 30.0%
ATTGAAGGAAATGGATAAGA+TGG + chr1_3:72212213-72212232 Msa0138990:intron 30.0%
AATGGATAAGATGGAATCTA+AGG + chr1_3:72212222-72212241 Msa0138990:intron 30.0%
TGTTTAAATACCCTCATGAT+TGG - chr1_3:72212326-72212345 None:intergenic 30.0%
ATTTCCCAACAGAAAATACA+AGG - chr1_3:72212356-72212375 None:intergenic 30.0%
ATCATGTAAATTGGTTACCA+TGG + chr1_3:72212438-72212457 Msa0138990:intron 30.0%
AAAAATTCCATCCCTATTAG+AGG - chr1_3:72212657-72212676 None:intergenic 30.0%
CTAAAACGAATGGAACAAAA+TGG - chr1_3:72212694-72212713 None:intergenic 30.0%
!! TCGTCTAATTCTAAAACGAA+TGG - chr1_3:72212704-72212723 None:intergenic 30.0%
CACCTTAACATTGGAAATAA+AGG - chr1_3:72212944-72212963 None:intergenic 30.0%
TGTAATTAATCAGGGTTAGA+AGG - chr1_3:72212977-72212996 None:intergenic 30.0%
TCTAACCCTGATTAATTACA+AGG + chr1_3:72212977-72212996 Msa0138990:intron 30.0%
! TAGATTAAACTGTGTTGATG+AGG + chr1_3:72213106-72213125 Msa0138990:intron 30.0%
!! TGCCTTTTCTTTGGAAATTT+CGG + chr1_3:72213683-72213702 Msa0138990:intron 30.0%
TACCGAAATTTCCAAAGAAA+AGG - chr1_3:72213688-72213707 None:intergenic 30.0%
GATAAACTACAGTAATGCTT+GGG - chr1_3:72213816-72213835 None:intergenic 30.0%
AGATAAACTACAGTAATGCT+TGG - chr1_3:72213817-72213836 None:intergenic 30.0%
! GCACATCATCAAGTATTTTT+AGG - chr1_3:72213857-72213876 None:intergenic 30.0%
!! TCTTTTTGTTTACCGAACAA+AGG - chr1_3:72213933-72213952 None:intergenic 30.0%
TTTGTTCGGTAAACAAAAAG+AGG + chr1_3:72213932-72213951 Msa0138990:intron 30.0%
CATTATCAAGTGTAACCTAA+TGG - chr1_3:72214082-72214101 None:intergenic 30.0%
TGAGTAATGAAAAAGAAGGA+AGG + chr1_3:72214155-72214174 Msa0138990:intron 30.0%
GAGTAATGAAAAAGAAGGAA+GGG + chr1_3:72214156-72214175 Msa0138990:intron 30.0%
GTTCCCAGAGTAAAAAAAAA+CGG + chr1_3:72214199-72214218 Msa0138990:intron 30.0%
CAAAATACTGCTATAAGAAC+TGG - chr1_3:72214358-72214377 None:intergenic 30.0%
! TTCTTATAGCAGTATTTTGC+TGG + chr1_3:72214359-72214378 Msa0138990:intron 30.0%
AATACGTAAAAGCTGGATAT+TGG - chr1_3:72214394-72214413 None:intergenic 30.0%
! AATATCCAGCTTTTACGTAT+TGG + chr1_3:72214393-72214412 Msa0138990:intron 30.0%
TATCCATTTATAGGCAATGT+GGG - chr1_3:72214442-72214461 None:intergenic 30.0%
TTATCCATTTATAGGCAATG+TGG - chr1_3:72214443-72214462 None:intergenic 30.0%
! AAATGTTGGCTATATAAGTG+GGG + chr1_3:72214462-72214481 Msa0138990:intron 30.0%
TATTCTTAGGCATAATGTTG+GGG - chr1_3:72214595-72214614 None:intergenic 30.0%
TTTATAAGATTCGTATCCAC+AGG + chr1_3:72214711-72214730 Msa0138990:intron 30.0%
TTATAAGATTCGTATCCACA+GGG + chr1_3:72214712-72214731 Msa0138990:intron 30.0%
CGGGAATGTCATTATTATTA+AGG + chr1_3:72214753-72214772 Msa0138990:intron 30.0%
TAAGGATGTTTGTAAAATGG+GGG + chr1_3:72214771-72214790 Msa0138990:intron 30.0%
GGGAATTATAATCAGAAAAG+AGG - chr1_3:72215000-72215019 None:intergenic 30.0%
TTATAATTCCCTAATCCCTT+AGG + chr1_3:72215009-72215028 Msa0138990:intron 30.0%
ATGATTATAGGTTCACCTAA+GGG - chr1_3:72215027-72215046 None:intergenic 30.0%
ATCTCTTAACCTAATCACAA+AGG + chr1_3:72215297-72215316 Msa0138990:intron 30.0%
AGGGATTCATTACATGAAAT+TGG + chr1_3:72215363-72215382 Msa0138990:intron 30.0%
! CATTACATGAAATTGGTAAC+CGG + chr1_3:72215370-72215389 Msa0138990:intron 30.0%
CTTTAGTCACGTAAAAAATC+GGG - chr1_3:72215629-72215648 None:intergenic 30.0%
GCTTTAGTCACGTAAAAAAT+CGG - chr1_3:72215630-72215649 None:intergenic 30.0%
! AGTTTGAAGCTACAAAAGAA+CGG - chr1_3:72215730-72215749 None:intergenic 30.0%
TAGAACATTTCACTGCTATA+AGG - chr1_3:72215886-72215905 None:intergenic 30.0%
AAAATGCAATGCTTCAATCA+TGG + chr1_3:72216041-72216060 Msa0138990:intron 30.0%
TTTAATGCAAACAGAGAACA+TGG - chr1_3:72216315-72216334 None:intergenic 30.0%
TAATTGTCTGATTTCTCATG+TGG + chr1_3:72216342-72216361 Msa0138990:intron 30.0%
TAAAATGCCTTACTTCTACA+AGG - chr1_3:72216410-72216429 None:intergenic 30.0%
CTTACTTTGATGCCATATTT+AGG + chr1_3:72216507-72216526 Msa0138990:intron 30.0%
TACTTTGATGCCATATTTAG+GGG + chr1_3:72216509-72216528 Msa0138990:intron 30.0%
!!! CCAATTTTTTCCCCTAAATA+TGG - chr1_3:72216522-72216541 None:intergenic 30.0%
CCATATTTAGGGGAAAAAAT+TGG + chr1_3:72216519-72216538 Msa0138990:intron 30.0%
GAGAAACTTACAATTGGTAT+TGG - chr1_3:72216549-72216568 None:intergenic 30.0%
! ATGTTAGAAGTTAAAAGCGT+GGG - chr1_3:72216717-72216736 None:intergenic 30.0%
GTCCCCAAATAATGAAAAAT+TGG - chr1_3:72216984-72217003 None:intergenic 30.0%
CGGATAAAAAGTAAGAAAAG+TGG + chr1_3:72217003-72217022 Msa0138990:intron 30.0%
CTAAATGAACAACTCACTTT+AGG + chr1_3:72217066-72217085 Msa0138990:intron 30.0%
AACGATCTTATATTTAGGGA+TGG + chr1_3:72217387-72217406 Msa0138990:intron 30.0%
ATCTTATATTTAGGGATGGA+GGG + chr1_3:72217391-72217410 Msa0138990:intron 30.0%
TGAAAAGTGAGATTAACGAA+TGG - chr1_3:72217544-72217563 None:intergenic 30.0%
! AAATGATTGTCCTGATTTTC+AGG + chr1_3:72217732-72217751 Msa0138990:exon 30.0%
! AATGATTGTCCTGATTTTCA+GGG + chr1_3:72217733-72217752 Msa0138990:exon 30.0%
AATTACAATACAGCTGGTAT+GGG - chr1_3:72218149-72218168 None:intergenic 30.0%
AAATTACAATACAGCTGGTA+TGG - chr1_3:72218150-72218169 None:intergenic 30.0%
TGTACAAATTACAATACAGC+TGG - chr1_3:72218155-72218174 None:intergenic 30.0%
TGAAAAAGAGCTTATGACGA+CGG - chr1_3:72206976-72206995 None:intergenic 35.0%
! GCTTCTAGAAGTAAAATTGG+CGG - chr1_3:72207039-72207058 None:intergenic 35.0%
AGTTATCATCACAAGTGCTT+TGG - chr1_3:72207550-72207569 None:intergenic 35.0%
! AGATTAATTTTATTGGGGGG+GGG - chr1_3:72207642-72207661 None:intergenic 35.0%
TATTCTGCTACAACATGACA+AGG - chr1_3:72207773-72207792 None:intergenic 35.0%
TTTCCTGTCATTCAAAGGAT+AGG - chr1_3:72207967-72207986 None:intergenic 35.0%
ATCCTTTGAATGACAGGAAA+AGG + chr1_3:72207967-72207986 Msa0138990:intron 35.0%
! AAGCTTGGTTTACGCTATTT+TGG - chr1_3:72207994-72208013 None:intergenic 35.0%
! GTAAACCAAGCTTCTGATTT+TGG + chr1_3:72208001-72208020 Msa0138990:intron 35.0%
AGAATTCAAAGTGGGAGATA+TGG - chr1_3:72208073-72208092 None:intergenic 35.0%
CAAGTTTGCAGAATTCAAAG+TGG - chr1_3:72208082-72208101 None:intergenic 35.0%
CTACCATAAACTGCCTTAAA+TGG + chr1_3:72208255-72208274 Msa0138990:intron 35.0%
! ACACCATTTAAGGCAGTTTA+TGG - chr1_3:72208261-72208280 None:intergenic 35.0%
! AATGTTTGGAGTTGTATCTC+AGG - chr1_3:72208377-72208396 None:intergenic 35.0%
!! CAAAAACTTTGGTGTCAGAT+AGG - chr1_3:72208515-72208534 None:intergenic 35.0%
! CTATCTGACACCAAAGTTTT+TGG + chr1_3:72208513-72208532 Msa0138990:intron 35.0%
! GCATGGTTTTCCAAAAACTT+TGG - chr1_3:72208526-72208545 None:intergenic 35.0%
CTGGTGAAATCAGATTTCAA+AGG + chr1_3:72208588-72208607 Msa0138990:intron 35.0%
GTGTCTATGGATTTCATTAC+TGG - chr1_3:72208687-72208706 None:intergenic 35.0%
! CTGCATTCAAGGTGTTAATA+AGG - chr1_3:72209009-72209028 None:intergenic 35.0%
GTAGATAAAAGAGGATTCAC+TGG + chr1_3:72209080-72209099 Msa0138990:intron 35.0%
TCTTTCTTTATGGCTTCATC+CGG - chr1_3:72209107-72209126 None:intergenic 35.0%
TGAAGCCATAAAGAAAGATC+GGG + chr1_3:72209109-72209128 Msa0138990:intron 35.0%
TTCACCATTGAATATAAGCC+GGG - chr1_3:72209164-72209183 None:intergenic 35.0%
! AATGGCTACACAAGTTTTTG+GGG - chr1_3:72209193-72209212 None:intergenic 35.0%
TGCGTAAAGTTCTCTTACAT+AGG + chr1_3:72209334-72209353 Msa0138990:intron 35.0%
CTTAAGTAAAGCAGTTAAGG+GGG + chr1_3:72209577-72209596 Msa0138990:intron 35.0%
!!! AGAGGTTTTTTGGGTTTATC+TGG - chr1_3:72209644-72209663 None:intergenic 35.0%
CATGGATAAGGATAAAGTGA+AGG - chr1_3:72209708-72209727 None:intergenic 35.0%
!! TTCACTGAAGTGGATTATCT+GGG - chr1_3:72209758-72209777 None:intergenic 35.0%
!! ATTCACTGAAGTGGATTATC+TGG - chr1_3:72209759-72209778 None:intergenic 35.0%
!! AAAAGGTCTAAGTGTTGCTT+TGG - chr1_3:72209782-72209801 None:intergenic 35.0%
! AAAGCAACACTTAGACCTTT+TGG + chr1_3:72209781-72209800 Msa0138990:intron 35.0%
GCCATTCATTATTTGCCAAA+AGG - chr1_3:72209799-72209818 None:intergenic 35.0%
AGTTAAGTGATCTATGTGTG+AGG + chr1_3:72209841-72209860 Msa0138990:intron 35.0%
! CCTCATGAATCATGTTTTTC+AGG - chr1_3:72209930-72209949 None:intergenic 35.0%
CCTGAAAAACATGATTCATG+AGG + chr1_3:72209927-72209946 Msa0138990:intron 35.0%
!!! CTGGTTTTACCAAAATCTGA+TGG + chr1_3:72210047-72210066 Msa0138990:intron 35.0%
!! TGCCCACTATTTTTCCAAAT+TGG - chr1_3:72210089-72210108 None:intergenic 35.0%
AAAGCTATCCTTCACAGTAA+TGG + chr1_3:72210150-72210169 Msa0138990:intron 35.0%
GGAATTAAGTGCTCTATAGT+CGG + chr1_3:72210171-72210190 Msa0138990:intron 35.0%
GAAGAAAAAGGACTATTGCT+TGG + chr1_3:72210241-72210260 Msa0138990:intron 35.0%
GGTTAATGAGATGTTACAAC+AGG - chr1_3:72210278-72210297 None:intergenic 35.0%
! GAAAGCACAAATAGAAACCA+TGG - chr1_3:72210299-72210318 None:intergenic 35.0%
TGGTTTCTATTTGTGCTTTC+TGG + chr1_3:72210299-72210318 Msa0138990:intron 35.0%
! CAGTTAATGTAAGGCCTTAT+AGG - chr1_3:72210336-72210355 None:intergenic 35.0%
CTATAAGGCCTTACATTAAC+TGG + chr1_3:72210334-72210353 Msa0138990:intron 35.0%
GTAGTAACCCAGTTAATGTA+AGG - chr1_3:72210345-72210364 None:intergenic 35.0%
! TCTAAGACTTGAGAGATTTC+AGG + chr1_3:72210445-72210464 Msa0138990:intron 35.0%
CTAAGACTTGAGAGATTTCA+GGG + chr1_3:72210446-72210465 Msa0138990:intron 35.0%
! GGTTTGTTCAAATCATTGTC+AGG + chr1_3:72210475-72210494 Msa0138990:intron 35.0%
TTGTTCAAATCATTGTCAGG+GGG + chr1_3:72210478-72210497 Msa0138990:intron 35.0%
CATTATAATCTGCGATGTGA+GGG + chr1_3:72210656-72210675 Msa0138990:intron 35.0%
GTGTATTTACTGCCTATTTC+TGG - chr1_3:72210724-72210743 None:intergenic 35.0%
GAAATAGGCAGTAAATACAC+AGG + chr1_3:72210724-72210743 Msa0138990:intron 35.0%
!! AATTGAGTAGTGGATTGAAC+TGG + chr1_3:72210838-72210857 Msa0138990:intron 35.0%
! CGTTTTCGTGGAAAAATTCA+AGG - chr1_3:72210943-72210962 None:intergenic 35.0%
AGAACCATTGAGTGCATTTA+AGG + chr1_3:72210981-72211000 Msa0138990:intron 35.0%
GAAGAAGAAAATGACGATTG+GGG + chr1_3:72211100-72211119 Msa0138990:intron 35.0%
! AATAGCAAAGACCCTTTTCA+CGG + chr1_3:72211157-72211176 Msa0138990:intron 35.0%
!!! TTGCTTTTTAGCGGTTGATT+TGG + chr1_3:72211219-72211238 Msa0138990:intron 35.0%
ATTAGATCCAGGAAAGTGAT+AGG + chr1_3:72211293-72211312 Msa0138990:intron 35.0%
TTAGATCCAGGAAAGTGATA+GGG + chr1_3:72211294-72211313 Msa0138990:intron 35.0%
!! GTTGATTTTGAATGTGGTGA+TGG + chr1_3:72211336-72211355 Msa0138990:intron 35.0%
ATAATACTCTGCTACAGTTG+AGG + chr1_3:72211530-72211549 Msa0138990:intron 35.0%
AGGTTTGGGTCAATTTGAAT+AGG + chr1_3:72211550-72211569 Msa0138990:intron 35.0%
GGTTTGGGTCAATTTGAATA+GGG + chr1_3:72211551-72211570 Msa0138990:intron 35.0%
TAATCAACCCTTCCAATCTT+GGG - chr1_3:72211640-72211659 None:intergenic 35.0%
! AAGATTGGAAGGGTTGATTA+CGG + chr1_3:72211640-72211659 Msa0138990:intron 35.0%
!! TGTTTTATTCATCTCAGCGA+TGG + chr1_3:72212013-72212032 Msa0138990:intron 35.0%
! GTTTTCCATACTCTTCATTC+GGG + chr1_3:72212037-72212056 Msa0138990:intron 35.0%
ATAAACACACAGTGAAACAG+AGG + chr1_3:72212118-72212137 Msa0138990:intron 35.0%
! TAGAAAAGCATAAGCTTCAG+AGG + chr1_3:72212252-72212271 Msa0138990:intron 35.0%
! AGAAAAGCATAAGCTTCAGA+GGG + chr1_3:72212253-72212272 Msa0138990:intron 35.0%
! TGCTCCTTGTATTTTCTGTT+GGG + chr1_3:72212349-72212368 Msa0138990:intron 35.0%
ACCAATTTACATGATGAGGA+GGG - chr1_3:72212433-72212452 None:intergenic 35.0%
AACCAATTTACATGATGAGG+AGG - chr1_3:72212434-72212453 None:intergenic 35.0%
GGTAACCAATTTACATGATG+AGG - chr1_3:72212437-72212456 None:intergenic 35.0%
TAAGGACAAAGAAGTTACCA+TGG - chr1_3:72212458-72212477 None:intergenic 35.0%
CTTGGAGACTGTTATGAATA+AGG - chr1_3:72212476-72212495 None:intergenic 35.0%
TCATATTCCTCTAATAGGGA+TGG + chr1_3:72212647-72212666 Msa0138990:five_prime_UTR 35.0%
!!! CAGTTTTTAGCACTTCTGTT+TGG + chr1_3:72212772-72212791 Msa0138990:five_prime_UTR 35.0%
AATCATATGCTACAGAGATC+GGG - chr1_3:72212885-72212904 None:intergenic 35.0%
CAATCATATGCTACAGAGAT+CGG - chr1_3:72212886-72212905 None:intergenic 35.0%
! GCCCTTTATTTCCAATGTTA+AGG + chr1_3:72212939-72212958 Msa0138990:five_prime_UTR 35.0%
TCACATGCTATGATTCCATA+AGG - chr1_3:72213055-72213074 None:intergenic 35.0%
ACAGTTTAATCTAGTCTGAC+AGG - chr1_3:72213099-72213118 None:intergenic 35.0%
! TCCTTGAAGTATAAGGCATT+TGG + chr1_3:72213429-72213448 Msa0138990:five_prime_UTR 35.0%
ACCAAATGCCTTATACTTCA+AGG - chr1_3:72213433-72213452 None:intergenic 35.0%
GTCAGAATATTGAGTTCTCT+TGG + chr1_3:72213451-72213470 Msa0138990:five_prime_UTR 35.0%
!! AAGAAGCAAAAGTATCAGGT+AGG - chr1_3:72213505-72213524 None:intergenic 35.0%
!! CGAAAAGAAGCAAAAGTATC+AGG - chr1_3:72213509-72213528 None:intergenic 35.0%
!!! TGGATTTTCTGATTTGGAGT+GGG - chr1_3:72213586-72213605 None:intergenic 35.0%
!!! ATGGATTTTCTGATTTGGAG+TGG - chr1_3:72213587-72213606 None:intergenic 35.0%
CTCCAAATCAGAAAATCCAT+TGG + chr1_3:72213587-72213606 Msa0138990:CDS 35.0%
!! GTGCTTTATTGCCTTTTCTT+TGG + chr1_3:72213674-72213693 Msa0138990:intron 35.0%
AATTTCGGTAGTCCAACATT+AGG + chr1_3:72213698-72213717 Msa0138990:intron 35.0%
TCTTGCCATTAACCTTTGTT+CGG + chr1_3:72213918-72213937 Msa0138990:intron 35.0%
GTTTACCGAACAAAGGTTAA+TGG - chr1_3:72213926-72213945 None:intergenic 35.0%
TGTAACCTAATGGCATGTTT+CGG - chr1_3:72214072-72214091 None:intergenic 35.0%
!!! CAGCCGTTTTTTTTTACTCT+GGG - chr1_3:72214205-72214224 None:intergenic 35.0%
!!! TCAGCCGTTTTTTTTTACTC+TGG - chr1_3:72214206-72214225 None:intergenic 35.0%
GTTTACTAATTCAGTAGCGT+AGG + chr1_3:72214239-72214258 Msa0138990:intron 35.0%
AGGTATTCTGATATATGTGC+TGG + chr1_3:72214274-72214293 Msa0138990:intron 35.0%
! ATAGCAGTATTTTGCTGGTA+AGG + chr1_3:72214364-72214383 Msa0138990:intron 35.0%
AAAAGCCAATACGTAAAAGC+TGG - chr1_3:72214401-72214420 None:intergenic 35.0%
! CCTTAAGGCATTAGGTATAT+AGG - chr1_3:72214491-72214510 None:intergenic 35.0%
CCTATATACCTAATGCCTTA+AGG + chr1_3:72214488-72214507 Msa0138990:intron 35.0%
! TACCTAATGCCTTAAGGTTT+TGG + chr1_3:72214494-72214513 Msa0138990:intron 35.0%
! ACCTAATGCCTTAAGGTTTT+GGG + chr1_3:72214495-72214514 Msa0138990:intron 35.0%
AAGGATGTTTGTAAAATGGG+GGG + chr1_3:72214772-72214791 Msa0138990:intron 35.0%
TGGTTTGAGAAATGATAGAG+AGG + chr1_3:72214852-72214871 Msa0138990:intron 35.0%
CGTTCGTAAACTTAAGAAAC+AGG - chr1_3:72214920-72214939 None:intergenic 35.0%
ATAATCAGAAAAGAGGGCTT+AGG - chr1_3:72214993-72215012 None:intergenic 35.0%
GATGATTATAGGTTCACCTA+AGG - chr1_3:72215028-72215047 None:intergenic 35.0%
GGTGAACCTATAATCATCAA+AGG + chr1_3:72215030-72215049 Msa0138990:intron 35.0%
! TCAATCTAACGGACAATCTA+GGG - chr1_3:72215101-72215120 None:intergenic 35.0%
! TTCAATCTAACGGACAATCT+AGG - chr1_3:72215102-72215121 None:intergenic 35.0%
TAGCTAGATCCTTTGTGATT+AGG - chr1_3:72215309-72215328 None:intergenic 35.0%
!! TAACCGGATTTGAGTTTTGA+TGG + chr1_3:72215386-72215405 Msa0138990:intron 35.0%
AGACCATCAAAACTCAAATC+CGG - chr1_3:72215392-72215411 None:intergenic 35.0%
!! TGGAGAAAGAAACTGACTTT+TGG - chr1_3:72215441-72215460 None:intergenic 35.0%
!! AAAGAACGGATTTTGAGTAC+TGG - chr1_3:72215716-72215735 None:intergenic 35.0%
TTATATGACCTAGTGTCATC+AGG + chr1_3:72215804-72215823 Msa0138990:intron 35.0%
!!! ACTGCAGATCTCTTGTTTTA+AGG + chr1_3:72215843-72215862 Msa0138990:intron 35.0%
!!! CTGCAGATCTCTTGTTTTAA+GGG + chr1_3:72215844-72215863 Msa0138990:intron 35.0%
!!! TCTTGTTTTAAGGGAGTAGA+AGG + chr1_3:72215853-72215872 Msa0138990:intron 35.0%
AGTGGCTAGAAAACACATTT+CGG + chr1_3:72216101-72216120 Msa0138990:intron 35.0%
CATGTTAGAAGTTAAAAGCG+TGG - chr1_3:72216718-72216737 None:intergenic 35.0%
TGCTTGACTAAAAGCTGAAT+GGG - chr1_3:72216802-72216821 None:intergenic 35.0%
! AGTCTTGTAAAACGAACGAA+GGG - chr1_3:72217141-72217160 None:intergenic 35.0%
!! TAGTCTTGTAAAACGAACGA+AGG - chr1_3:72217142-72217161 None:intergenic 35.0%
GATCTTATATTTAGGGATGG+AGG + chr1_3:72217390-72217409 Msa0138990:intron 35.0%
!! TCACTTTTCACCAGTTACAA+TGG + chr1_3:72217554-72217573 Msa0138990:intron 35.0%
AGATAAGAGTCCATTGTAAC+TGG - chr1_3:72217567-72217586 None:intergenic 35.0%
CTTGAAGGTTTACTTAAACG+TGG + chr1_3:72217675-72217694 Msa0138990:CDS 35.0%
AGGTTTACTTAAACGTGGTT+TGG + chr1_3:72217680-72217699 Msa0138990:CDS 35.0%
! TTTGTAGCTTTTTGCAAACG+TGG - chr1_3:72217715-72217734 None:intergenic 35.0%
AGCAGAAGATATGTTAAACC+CGG + chr1_3:72217940-72217959 Msa0138990:three_prime_UTR 35.0%
AAATACTCCAACGTCTTGAA+GGG - chr1_3:72218020-72218039 None:intergenic 35.0%
CTAGCATTGCGATTCAAAGA+TGG - chr1_3:72207005-72207024 None:intergenic 40.0%
TTGGAAGAGAGTGAAGTTGA+GGG - chr1_3:72207065-72207084 None:intergenic 40.0%
ATTGGAAGAGAGTGAAGTTG+AGG - chr1_3:72207066-72207085 None:intergenic 40.0%
! GCTTAGAAGAAGAAGTGTGA+GGG - chr1_3:72207106-72207125 None:intergenic 40.0%
CTTGAATCGATGGAAAGTTG+AGG - chr1_3:72207132-72207151 None:intergenic 40.0%
ATATTCGTGCCTCTTTCCAT+TGG + chr1_3:72207496-72207515 Msa0138990:intron 40.0%
GGGGGGTAATGTTATGAATA+AGG - chr1_3:72207622-72207641 None:intergenic 40.0%
! ATTAATTTTATTGGGGGGGG+GGG - chr1_3:72207640-72207659 None:intergenic 40.0%
! GATTAATTTTATTGGGGGGG+GGG - chr1_3:72207641-72207660 None:intergenic 40.0%
CTGAAGCTACTTGGGAAAAT+TGG - chr1_3:72207708-72207727 None:intergenic 40.0%
TCCCAAGTAGCTTCAGATAT+AGG + chr1_3:72207712-72207731 Msa0138990:intron 40.0%
! CCCTATATCTGAAGCTACTT+GGG - chr1_3:72207716-72207735 None:intergenic 40.0%
CCCAAGTAGCTTCAGATATA+GGG + chr1_3:72207713-72207732 Msa0138990:intron 40.0%
! TCCCTATATCTGAAGCTACT+TGG - chr1_3:72207717-72207736 None:intergenic 40.0%
ATTGTGTAAGGGTGATCATC+AGG - chr1_3:72207872-72207891 None:intergenic 40.0%
CATTCAAAGGATAGGTGATG+TGG - chr1_3:72207959-72207978 None:intergenic 40.0%
TCACCTATCCTTTGAATGAC+AGG + chr1_3:72207961-72207980 Msa0138990:intron 40.0%
! GTCCTTTTCCTGTCATTCAA+AGG - chr1_3:72207972-72207991 None:intergenic 40.0%
TTGCACCAAAATCAGAAGCT+TGG - chr1_3:72208009-72208028 None:intergenic 40.0%
!! AAGCTTCTGATTTTGGTGCA+AGG + chr1_3:72208008-72208027 Msa0138990:intron 40.0%
!! CTGATTTTGGTGCAAGGATA+AGG + chr1_3:72208014-72208033 Msa0138990:intron 40.0%
GCAAGGATAAGGAATGTTGA+CGG + chr1_3:72208025-72208044 Msa0138990:intron 40.0%
GATAAGGAATGTTGACGGTA+CGG + chr1_3:72208030-72208049 Msa0138990:intron 40.0%
CAAAGTGGGAGATATGGTAT+TGG - chr1_3:72208067-72208086 None:intergenic 40.0%
GCAAGCACTACTAACTGAAA+GGG - chr1_3:72208181-72208200 None:intergenic 40.0%
TGCAAGCACTACTAACTGAA+AGG - chr1_3:72208182-72208201 None:intergenic 40.0%
TTAGTAGTGCTTGCAGTGAA+GGG + chr1_3:72208187-72208206 Msa0138990:intron 40.0%
CATTGGCATGACACCATTTA+AGG - chr1_3:72208271-72208290 None:intergenic 40.0%
! TACTTGCATGGGCAGAATTT+TGG - chr1_3:72208317-72208336 None:intergenic 40.0%
ATGGTCTAAGCTACTTGCAT+GGG - chr1_3:72208328-72208347 None:intergenic 40.0%
AATGGTCTAAGCTACTTGCA+TGG - chr1_3:72208329-72208348 None:intergenic 40.0%
AGTAGCTTAGACCATTTGTG+CGG + chr1_3:72208333-72208352 Msa0138990:intron 40.0%
! TTGTATCTCAGGTGTTTTGC+AGG - chr1_3:72208366-72208385 None:intergenic 40.0%
! CAAACATTTGTTGACAGCCT+CGG + chr1_3:72208389-72208408 Msa0138990:intron 40.0%
CAAATTAAGTGGCACCACTT+TGG - chr1_3:72208454-72208473 None:intergenic 40.0%
TGATTTCACCAGTGCTAAAG+TGG - chr1_3:72208580-72208599 None:intergenic 40.0%
ACAGAAAAACCATTAGAGGG+AGG + chr1_3:72208657-72208676 Msa0138990:intron 40.0%
AAAAACCATTAGAGGGAGGA+AGG + chr1_3:72208661-72208680 Msa0138990:intron 40.0%
GATTTGGGAAGATGTGTCTA+TGG - chr1_3:72208700-72208719 None:intergenic 40.0%
GAATTGCATCTCAGTTCACT+TGG - chr1_3:72208839-72208858 None:intergenic 40.0%
TTTCACTCTTCTATGTTGGG+TGG - chr1_3:72208891-72208910 None:intergenic 40.0%
! TCTTGTTTCACATGGTACAG+TGG + chr1_3:72208981-72209000 Msa0138990:intron 40.0%
AATGCAGAGCTGCTTGATTT+GGG + chr1_3:72209022-72209041 Msa0138990:intron 40.0%
!! TGCTTGATTTGGGACAAAGA+AGG + chr1_3:72209032-72209051 Msa0138990:intron 40.0%
!! GCTTGATTTGGGACAAAGAA+GGG + chr1_3:72209033-72209052 Msa0138990:intron 40.0%
TAAAAGAGGATTCACTGGTC+CGG + chr1_3:72209085-72209104 Msa0138990:intron 40.0%
TTTGCCCGGCTTATATTCAA+TGG + chr1_3:72209157-72209176 Msa0138990:intron 40.0%
!!! TGTAGCCATTTTTGTTGCTC+CGG + chr1_3:72209203-72209222 Msa0138990:intron 40.0%
AAACTCCGGAGCAACAAAAA+TGG - chr1_3:72209211-72209230 None:intergenic 40.0%
TTACGCAGTTACTGAAGCTA+TGG - chr1_3:72209321-72209340 None:intergenic 40.0%
!! GCATCAGTCTCTAGAATGAA+TGG + chr1_3:72209452-72209471 Msa0138990:intron 40.0%
!! ATGGCTTTGTAAAATCAGGC+AGG + chr1_3:72209471-72209490 Msa0138990:intron 40.0%
!! TGGCTTTGTAAAATCAGGCA+GGG + chr1_3:72209472-72209491 Msa0138990:intron 40.0%
! TTGCTTTGGATTCACTGAAG+TGG - chr1_3:72209768-72209787 None:intergenic 40.0%
TCAACTCAGAAAATCAGTGC+TGG - chr1_3:72209906-72209925 None:intergenic 40.0%
CCAAGGTTTATATGAGTGGT+TGG - chr1_3:72209996-72210015 None:intergenic 40.0%
CCAACCACTCATATAAACCT+TGG + chr1_3:72209993-72210012 Msa0138990:intron 40.0%
CTCACCAAGGTTTATATGAG+TGG - chr1_3:72210000-72210019 None:intergenic 40.0%
ACAGATACAAGACTGCATTC+AGG - chr1_3:72210024-72210043 None:intergenic 40.0%
!! ATCAGGGTACCATCAGATTT+TGG - chr1_3:72210059-72210078 None:intergenic 40.0%
ATCTAGCAGTTCATCAACTG+TGG + chr1_3:72210120-72210139 Msa0138990:intron 40.0%
TCTAGCAGTTCATCAACTGT+GGG + chr1_3:72210121-72210140 Msa0138990:intron 40.0%
AAAAGAAAGATGGCTCTTGG+CGG - chr1_3:72210204-72210223 None:intergenic 40.0%
TGGGTTACTACCTTCAAGTA+AGG + chr1_3:72210354-72210373 Msa0138990:intron 40.0%
GGGTTACTACCTTCAAGTAA+GGG + chr1_3:72210355-72210374 Msa0138990:intron 40.0%
GGTTACTACCTTCAAGTAAG+GGG + chr1_3:72210356-72210375 Msa0138990:intron 40.0%
TGAGAGATTTCAGGGTGAAT+AGG + chr1_3:72210454-72210473 Msa0138990:intron 40.0%
CAAATTGCAGGGTAAAAGCA+AGG + chr1_3:72210512-72210531 Msa0138990:intron 40.0%
TGATGTGATTGAACTGTGCT+TGG + chr1_3:72210563-72210582 Msa0138990:intron 40.0%
CTTTATGGTGACACTCCTAA+AGG - chr1_3:72210595-72210614 None:intergenic 40.0%
GCATTATAATCTGCGATGTG+AGG + chr1_3:72210655-72210674 Msa0138990:intron 40.0%
TAGGCAGTAAATACACAGGA+AGG + chr1_3:72210728-72210747 Msa0138990:intron 40.0%
GTATTACCCTGAATAGTGAC+TGG + chr1_3:72210757-72210776 Msa0138990:intron 40.0%
GATTTGCCAGTCACTATTCA+GGG - chr1_3:72210766-72210785 None:intergenic 40.0%
! TGATTTGCCAGTCACTATTC+AGG - chr1_3:72210767-72210786 None:intergenic 40.0%
CAAATCAGATATGTACCCCA+TGG + chr1_3:72210780-72210799 Msa0138990:intron 40.0%
TGTAGAGACTGAGCAATTCT+GGG + chr1_3:72210865-72210884 Msa0138990:intron 40.0%
! TCACTGTGTTGTTGGATAGT+GGG - chr1_3:72210912-72210931 None:intergenic 40.0%
AATGCACTCAATGGTTCTCA+CGG - chr1_3:72210979-72210998 None:intergenic 40.0%
!! TTTTGAGGAATGGTTTCAGG+TGG + chr1_3:72211048-72211067 Msa0138990:intron 40.0%
!!! AGCTCTGGAGATGTTTTTGA+TGG + chr1_3:72211194-72211213 Msa0138990:intron 40.0%
!!! GCTCTGGAGATGTTTTTGAT+GGG + chr1_3:72211195-72211214 Msa0138990:intron 40.0%
!! CTCTGGAGATGTTTTTGATG+GGG + chr1_3:72211196-72211215 Msa0138990:intron 40.0%
!!! TTGATGGGGTTGCTTTTTAG+CGG + chr1_3:72211210-72211229 Msa0138990:intron 40.0%
!!! CTTTTTAGCGGTTGATTTGG+TGG + chr1_3:72211222-72211241 Msa0138990:intron 40.0%
!! TGATTTGGTGGTTTAGGGTT+AGG + chr1_3:72211234-72211253 Msa0138990:intron 40.0%
!! GATTTGGTGGTTTAGGGTTA+GGG + chr1_3:72211235-72211254 Msa0138990:intron 40.0%
TTAGGGTTGGAATTAGATCC+AGG + chr1_3:72211282-72211301 Msa0138990:intron 40.0%
TAAGCACGTGACAATGAAGA+TGG + chr1_3:72211393-72211412 Msa0138990:intron 40.0%
! TTGCTTTATCAGTGGACTCA+AGG - chr1_3:72211451-72211470 None:intergenic 40.0%
TCCACTGATAAAGCAATCCA+AGG + chr1_3:72211455-72211474 Msa0138990:intron 40.0%
ACCTTGGATTGCTTTATCAG+TGG - chr1_3:72211459-72211478 None:intergenic 40.0%
TTGGGTCAATTTGAATAGGG+TGG + chr1_3:72211554-72211573 Msa0138990:intron 40.0%
TGGGTCAATTTGAATAGGGT+GGG + chr1_3:72211555-72211574 Msa0138990:intron 40.0%
AATCTTGGGTCATGTTCACA+CGG - chr1_3:72211626-72211645 None:intergenic 40.0%
AACATGACCCAAGATTGGAA+GGG + chr1_3:72211630-72211649 Msa0138990:intron 40.0%
GTAATCAACCCTTCCAATCT+TGG - chr1_3:72211641-72211660 None:intergenic 40.0%
! AGATTGGAAGGGTTGATTAC+GGG + chr1_3:72211641-72211660 Msa0138990:intron 40.0%
TTGATGTTGCGCATCTGAAA+CGG + chr1_3:72211819-72211838 Msa0138990:intron 40.0%
! GTTGATGAGAGTAGTCGTTA+TGG + chr1_3:72211958-72211977 Msa0138990:intron 40.0%
CTCATGATTGCCAATCATGA+GGG + chr1_3:72212313-72212332 Msa0138990:intron 40.0%
! GTGCTCCTTGTATTTTCTGT+TGG + chr1_3:72212348-72212367 Msa0138990:intron 40.0%
GATCCACACATTCAGGAATT+GGG - chr1_3:72212397-72212416 None:intergenic 40.0%
TGATCCACACATTCAGGAAT+TGG - chr1_3:72212398-72212417 None:intergenic 40.0%
TCCCTCCTCATCATGTAAAT+TGG + chr1_3:72212429-72212448 Msa0138990:intron 40.0%
TCATTGAAAGTAGGAAGCTG+TGG - chr1_3:72212817-72212836 None:intergenic 40.0%
!! AAATAAAGGGCATCCATTCC+GGG - chr1_3:72212930-72212949 None:intergenic 40.0%
!! GAAATAAAGGGCATCCATTC+CGG - chr1_3:72212931-72212950 None:intergenic 40.0%
TCTGACAGGAAAAGAGTCAA+AGG - chr1_3:72213085-72213104 None:intergenic 40.0%
GTCTGGCAATATCTGCAAAA+TGG - chr1_3:72213388-72213407 None:intergenic 40.0%
GCAATGGTCCTTGAAGTATA+AGG + chr1_3:72213422-72213441 Msa0138990:five_prime_UTR 40.0%
!! CGCCAATGGATTTTCTGATT+TGG - chr1_3:72213592-72213611 None:intergenic 40.0%
CATTTCCGAAACATGCCATT+AGG + chr1_3:72214064-72214083 Msa0138990:intron 40.0%
AGCGTAGGTCACTTAAAAGA+AGG + chr1_3:72214254-72214273 Msa0138990:intron 40.0%
ACTGCTATAAGAACTGGTCA+AGG - chr1_3:72214352-72214371 None:intergenic 40.0%
AGTCCCACATTGCCTATAAA+TGG + chr1_3:72214436-72214455 Msa0138990:intron 40.0%
! ACCCAAAACCTTAAGGCATT+AGG - chr1_3:72214499-72214518 None:intergenic 40.0%
!!! TAATGCCTTAAGGTTTTGGG+TGG + chr1_3:72214498-72214517 Msa0138990:intron 40.0%
GAGTCTGACATGATATGAGT+AGG + chr1_3:72214639-72214658 Msa0138990:intron 40.0%
GGACTGTTTCAACTTCTACT+CGG + chr1_3:72214733-72214752 Msa0138990:intron 40.0%
GACTGTTTCAACTTCTACTC+GGG + chr1_3:72214734-72214753 Msa0138990:intron 40.0%
GAAATGATAGAGAGGTGACT+AGG + chr1_3:72214860-72214879 Msa0138990:intron 40.0%
AAAAGAGGGCTTAGGATCAA+GGG - chr1_3:72214985-72215004 None:intergenic 40.0%
TAGGTTCACCTAAGGGATTA+GGG - chr1_3:72215020-72215039 None:intergenic 40.0%
ATAGGTTCACCTAAGGGATT+AGG - chr1_3:72215021-72215040 None:intergenic 40.0%
ACAAAGGATCTAGCTACTCA+TGG + chr1_3:72215313-72215332 Msa0138990:intron 40.0%
!!! AAGAAACTGACTTTTGGAGC+TGG - chr1_3:72215435-72215454 None:intergenic 40.0%
TCTCCAAAATTTCGAACCCT+TGG + chr1_3:72215455-72215474 Msa0138990:intron 40.0%
! AAGCCAAGGGTTCGAAATTT+TGG - chr1_3:72215461-72215480 None:intergenic 40.0%
CATAGAAACCTGATGACACT+AGG - chr1_3:72215815-72215834 None:intergenic 40.0%
GGTTGTGTTATCTTTGTGCT+TGG + chr1_3:72215982-72216001 Msa0138990:intron 40.0%
TGTTATCTTTGTGCTTGGAC+TGG + chr1_3:72215987-72216006 Msa0138990:intron 40.0%
GGCTTAAACAAGATACAGCT+AGG - chr1_3:72216077-72216096 None:intergenic 40.0%
! ATCTTGTTTAAGCCATCCAG+TGG + chr1_3:72216083-72216102 Msa0138990:intron 40.0%
!! GAAATGTGTTTTCTAGCCAC+TGG - chr1_3:72216102-72216121 None:intergenic 40.0%
CATCAGACGCAACATTAACA+TGG - chr1_3:72216286-72216305 None:intergenic 40.0%
ACTTCTACAAGGCATGAAGA+AGG - chr1_3:72216399-72216418 None:intergenic 40.0%
CTTCATGCCTTGTAGAAGTA+AGG + chr1_3:72216400-72216419 Msa0138990:intron 40.0%
AACTAGCTGCAAGTTCCTAT+TGG + chr1_3:72216585-72216604 Msa0138990:intron 40.0%
ACTAGCTGCAAGTTCCTATT+GGG + chr1_3:72216586-72216605 Msa0138990:intron 40.0%
TTCCTTAGTGTGCATACATG+TGG - chr1_3:72216661-72216680 None:intergenic 40.0%
GCTTGACTAAAAGCTGAATG+GGG - chr1_3:72216801-72216820 None:intergenic 40.0%
GTGCTTGACTAAAAGCTGAA+TGG - chr1_3:72216803-72216822 None:intergenic 40.0%
GAGACTGTCAGCTGTAATAA+TGG - chr1_3:72216851-72216870 None:intergenic 40.0%
!! GAACGAAGGGAGTATTGATT+TGG - chr1_3:72217128-72217147 None:intergenic 40.0%
GGAGAGGAGGAAAATACAAA+GGG - chr1_3:72217624-72217643 None:intergenic 40.0%
TGGAGAGGAGGAAAATACAA+AGG - chr1_3:72217625-72217644 None:intergenic 40.0%
! TTGTATTTTCCTCCTCTCCA+TGG + chr1_3:72217625-72217644 Msa0138990:intron 40.0%
AAAATGGAGCCCTGAAAATC+AGG - chr1_3:72217745-72217764 None:intergenic 40.0%
!! TTATCATGCCAGTGTTGGTT+AGG + chr1_3:72217832-72217851 Msa0138990:three_prime_UTR 40.0%
TAAATCCACCTAACCAACAC+TGG - chr1_3:72217843-72217862 None:intergenic 40.0%
TTAATTCCTCACGGCTCTTA+TGG + chr1_3:72217878-72217897 Msa0138990:three_prime_UTR 40.0%
GAAATACTCCAACGTCTTGA+AGG - chr1_3:72218021-72218040 None:intergenic 40.0%
ATTTCATACGGACATCGTCG+CGG + chr1_3:72206885-72206904 Msa0138990:five_prime_UTR 45.0%
TGGAAGAGAGTGAAGTTGAG+GGG - chr1_3:72207064-72207083 None:intergenic 45.0%
GAGTCTGAAGAAGAAGCGAT+TGG - chr1_3:72207084-72207103 None:intergenic 45.0%
! CGCTTAGAAGAAGAAGTGTG+AGG - chr1_3:72207107-72207126 None:intergenic 45.0%
GGGAAAAACGCTTGAATCGA+TGG - chr1_3:72207142-72207161 None:intergenic 45.0%
ATCACAAGTGCTTTGGTGAG+TGG - chr1_3:72207543-72207562 None:intergenic 45.0%
! TTAATTTTATTGGGGGGGGG+GGG - chr1_3:72207639-72207658 None:intergenic 45.0%
AGCTTCAGATATAGGGAAGC+TGG + chr1_3:72207720-72207739 Msa0138990:intron 45.0%
CCTTTCCTCACTACTGATAC+TGG - chr1_3:72207832-72207851 None:intergenic 45.0%
CCAGTATCAGTAGTGAGGAA+AGG + chr1_3:72207829-72207848 Msa0138990:intron 45.0%
ATCAGTAGTGAGGAAAGGTG+TGG + chr1_3:72207834-72207853 Msa0138990:intron 45.0%
! TCAGTAGTGAGGAAAGGTGT+GGG + chr1_3:72207835-72207854 Msa0138990:intron 45.0%
GTGAAATACCGGGTGTATCT+TGG + chr1_3:72207906-72207925 Msa0138990:intron 45.0%
TTGTTGAGCGCGATGAAGAT+TGG + chr1_3:72208131-72208150 Msa0138990:intron 45.0%
GTTAGTAGTGCTTGCAGTGA+AGG + chr1_3:72208186-72208205 Msa0138990:intron 45.0%
TAGTAGTGCTTGCAGTGAAG+GGG + chr1_3:72208188-72208207 Msa0138990:intron 45.0%
TCTGCTTACCAATGCAGCAT+TGG - chr1_3:72208288-72208307 None:intergenic 45.0%
CGAGGCTGTCAACAAATGTT+TGG - chr1_3:72208391-72208410 None:intergenic 45.0%
TTTGTCCATCCGATTGAGGA+TGG + chr1_3:72208412-72208431 Msa0138990:intron 45.0%
CACAATGTGGTGAAGTTGCA+TGG - chr1_3:72208543-72208562 None:intergenic 45.0%
ATCAAGCAGCTCTGCATTCA+AGG - chr1_3:72209020-72209039 None:intergenic 45.0%
GAATGCAGAGCTGCTTGATT+TGG + chr1_3:72209021-72209040 Msa0138990:intron 45.0%
GCAGCAATGTTATCTTTGCC+CGG + chr1_3:72209143-72209162 Msa0138990:intron 45.0%
ATAGGCAGACTTGTGTTGCA+TGG + chr1_3:72209352-72209371 Msa0138990:intron 45.0%
! ATTCTAGAGACTGATGCGTC+TGG - chr1_3:72209449-72209468 None:intergenic 45.0%
ACACGCTATTACTGTTGCTC+CGG - chr1_3:72209504-72209523 None:intergenic 45.0%
GGATAAAGTGAAGGCAGTAC+TGG - chr1_3:72209699-72209718 None:intergenic 45.0%
TCATGGTGTGCACATGGATA+AGG - chr1_3:72209720-72209739 None:intergenic 45.0%
CACCATGATGAGAGATGGTA+TGG + chr1_3:72209732-72209751 Msa0138990:intron 45.0%
TCTATGTGTGAGGACCAAGA+AGG + chr1_3:72209851-72209870 Msa0138990:intron 45.0%
!! ATGAGGCTCTGAAAAGATGC+AGG + chr1_3:72209944-72209963 Msa0138990:intron 45.0%
!! TGAGGCTCTGAAAAGATGCA+GGG + chr1_3:72209945-72209964 Msa0138990:intron 45.0%
!!! AGTGGTTGGTGATGCCTTTT+GGG - chr1_3:72209982-72210001 None:intergenic 45.0%
! GCAGTCTTGTATCTGTCTTC+TGG + chr1_3:72210028-72210047 Msa0138990:intron 45.0%
CCAAATTGGATCTGCGATCA+GGG - chr1_3:72210075-72210094 None:intergenic 45.0%
TCCAAATTGGATCTGCGATC+AGG - chr1_3:72210076-72210095 None:intergenic 45.0%
!! TGGAAAAATAGTGGGCACCA+TGG + chr1_3:72210092-72210111 Msa0138990:intron 45.0%
GAACTGCTAGATGAACTCCA+TGG - chr1_3:72210112-72210131 None:intergenic 45.0%
CTAGCAGTTCATCAACTGTG+GGG + chr1_3:72210122-72210141 Msa0138990:intron 45.0%
AGTTCATCAACTGTGGGGAT+TGG + chr1_3:72210127-72210146 Msa0138990:intron 45.0%
!! ATTTGTGCTTTCTGGCTGTG+TGG + chr1_3:72210307-72210326 Msa0138990:intron 45.0%
!! TTTGTGCTTTCTGGCTGTGT+GGG + chr1_3:72210308-72210327 Msa0138990:intron 45.0%
ACTACCTTCAAGTAAGGGGA+TGG + chr1_3:72210360-72210379 Msa0138990:intron 45.0%
CTACTTGTTTACCTCCCACT+AGG - chr1_3:72210399-72210418 None:intergenic 45.0%
CTAGTGGGAGGTAAACAAGT+AGG + chr1_3:72210397-72210416 Msa0138990:intron 45.0%
TGATTGAACTGTGCTTGGCT+CGG + chr1_3:72210568-72210587 Msa0138990:intron 45.0%
GTTCCTTGGTTACAGACCTT+AGG - chr1_3:72210682-72210701 None:intergenic 45.0%
ACCAAGGAACCCCTAAAACA+AGG + chr1_3:72210692-72210711 Msa0138990:intron 45.0%
!!! ACCTTGTTTTAGGGGTTCCT+TGG - chr1_3:72210696-72210715 None:intergenic 45.0%
!!! TGGAGCTGACCTTGTTTTAG+GGG - chr1_3:72210704-72210723 None:intergenic 45.0%
!!! CTGGAGCTGACCTTGTTTTA+GGG - chr1_3:72210705-72210724 None:intergenic 45.0%
!!! TCTGGAGCTGACCTTGTTTT+AGG - chr1_3:72210706-72210725 None:intergenic 45.0%
ACAAGGTCAGCTCCAGAAAT+AGG + chr1_3:72210709-72210728 Msa0138990:intron 45.0%
ATCAGATATGTACCCCATGG+TGG + chr1_3:72210783-72210802 Msa0138990:intron 45.0%
CTGTAGAGACTGAGCAATTC+TGG + chr1_3:72210864-72210883 Msa0138990:intron 45.0%
! GTCACTGTGTTGTTGGATAG+TGG - chr1_3:72210913-72210932 None:intergenic 45.0%
CATCGATGTCACTGTGTTGT+TGG - chr1_3:72210920-72210939 None:intergenic 45.0%
TGGTGTTCAGAGTCTCCAAT+CGG + chr1_3:72211009-72211028 Msa0138990:intron 45.0%
!!! GGGTTTTGAGGAATGGTTTC+AGG + chr1_3:72211045-72211064 Msa0138990:intron 45.0%
! ATTGGGGCATTTGTGAGTGA+TGG + chr1_3:72211116-72211135 Msa0138990:intron 45.0%
ATGCAGATTCGCCGTGAAAA+GGG - chr1_3:72211171-72211190 None:intergenic 45.0%
AATGCAGATTCGCCGTGAAA+AGG - chr1_3:72211172-72211191 None:intergenic 45.0%
!! AGCGGTTGATTTGGTGGTTT+AGG + chr1_3:72211228-72211247 Msa0138990:intron 45.0%
!! GCGGTTGATTTGGTGGTTTA+GGG + chr1_3:72211229-72211248 Msa0138990:intron 45.0%
! GGTTTAGGGTTAGGGAGAAT+TGG + chr1_3:72211243-72211262 Msa0138990:intron 45.0%
TTAGGGTTAGGGAGAATTGG+TGG + chr1_3:72211246-72211265 Msa0138990:intron 45.0%
TCCAGGAAAGTGATAGGGTT+TGG + chr1_3:72211299-72211318 Msa0138990:intron 45.0%
ACCAAACCCTATCACTTTCC+TGG - chr1_3:72211303-72211322 None:intergenic 45.0%
AGGAAAGTGATAGGGTTTGG+TGG + chr1_3:72211302-72211321 Msa0138990:intron 45.0%
!! GATAGGGTTTGGTGGAATTG+AGG + chr1_3:72211310-72211329 Msa0138990:intron 45.0%
ATCTCAAGGTTTGAGCTCTG+AGG - chr1_3:72211484-72211503 None:intergenic 45.0%
GCTCAAACCTTGAGATCTGT+TGG + chr1_3:72211488-72211507 Msa0138990:intron 45.0%
GTTCTTGCCAACAGATCTCA+AGG - chr1_3:72211498-72211517 None:intergenic 45.0%
ACTCTGCTACAGTTGAGGTT+TGG + chr1_3:72211535-72211554 Msa0138990:intron 45.0%
CTCTGCTACAGTTGAGGTTT+GGG + chr1_3:72211536-72211555 Msa0138990:intron 45.0%
AATTTGAATAGGGTGGGCCT+TGG + chr1_3:72211561-72211580 Msa0138990:intron 45.0%
ATTTGAATAGGGTGGGCCTT+GGG + chr1_3:72211562-72211581 Msa0138990:intron 45.0%
CTTCACCATATGAATCCCCA+AGG - chr1_3:72211581-72211600 None:intergenic 45.0%
CTTGGGGATTCATATGGTGA+AGG + chr1_3:72211579-72211598 Msa0138990:intron 45.0%
AGGCCCAAACTCCATTTCTA+AGG + chr1_3:72211599-72211618 Msa0138990:intron 45.0%
GGGCCTTAGAAATGGAGTTT+GGG - chr1_3:72211605-72211624 None:intergenic 45.0%
ATCTTGGGTCATGTTCACAC+GGG - chr1_3:72211625-72211644 None:intergenic 45.0%
GTGTGAACATGACCCAAGAT+TGG + chr1_3:72211625-72211644 Msa0138990:intron 45.0%
GAACATGACCCAAGATTGGA+AGG + chr1_3:72211629-72211648 Msa0138990:intron 45.0%
! CGGGAAATCATCTGAAACCA+TGG + chr1_3:72211660-72211679 Msa0138990:intron 45.0%
CACGTCTTTCTCCATATGCA+CGG + chr1_3:72211686-72211705 Msa0138990:intron 45.0%
!! ACGGTTCTGAGGTACTTAAC+TGG - chr1_3:72211779-72211798 None:intergenic 45.0%
! CTAGATTTTCCGCGATTCGA+CGG - chr1_3:72211798-72211817 None:intergenic 45.0%
CAAAACGAGCTTGATCCAGA+AGG + chr1_3:72211934-72211953 Msa0138990:intron 45.0%
GATGAGAGTAGTCGTTATGG+CGG + chr1_3:72211961-72211980 Msa0138990:intron 45.0%
CAACACCCGAATGAAGAGTA+TGG - chr1_3:72212045-72212064 None:intergenic 45.0%
GTAATGGCTAGGCCAATTGA+AGG + chr1_3:72212198-72212217 Msa0138990:intron 45.0%
GCTAGGCCAATTGAAGGAAA+TGG + chr1_3:72212204-72212223 Msa0138990:intron 45.0%
TGATTGGCAATCATGAGGTG+TGG - chr1_3:72212310-72212329 None:intergenic 45.0%
CCTCATGATTGGCAATCATG+AGG - chr1_3:72212315-72212334 None:intergenic 45.0%
CCTCATGATTGCCAATCATG+AGG + chr1_3:72212312-72212331 Msa0138990:intron 45.0%
GGCAATTGATCCACACATTC+AGG - chr1_3:72212404-72212423 None:intergenic 45.0%
GAAAGTAGGAAGCTGTGGTT+GGG - chr1_3:72212812-72212831 None:intergenic 45.0%
TGAAAGTAGGAAGCTGTGGT+TGG - chr1_3:72212813-72212832 None:intergenic 45.0%
TTCCGAATGCAGGGTTAAGA+TGG + chr1_3:72212849-72212868 Msa0138990:five_prime_UTR 45.0%
CTCCATCTTAACCCTGCATT+CGG - chr1_3:72212854-72212873 None:intergenic 45.0%
GAGCAAGCACACCTTAACAT+TGG - chr1_3:72212953-72212972 None:intergenic 45.0%
!! TTGGCTTGCTCGTAATATGC+AGG + chr1_3:72213470-72213489 Msa0138990:five_prime_UTR 45.0%
GAAAATCCATTGGCGATCTC+TGG + chr1_3:72213597-72213616 Msa0138990:CDS 45.0%
TTCCCAACAGGTAACTGACA+AGG + chr1_3:72213626-72213645 Msa0138990:intron 45.0%
TCCCAACAGGTAACTGACAA+GGG + chr1_3:72213627-72213646 Msa0138990:intron 45.0%
AACTACAGTAATGCTTGGGC+AGG - chr1_3:72213812-72213831 None:intergenic 45.0%
AGGTTAGCAAGAGAAGAGAG+TGG + chr1_3:72213952-72213971 Msa0138990:intron 45.0%
GGTGAATTCCTTCCTTACAC+TGG + chr1_3:72214177-72214196 Msa0138990:intron 45.0%
! TTACTCTGGGAACCAGTGTA+AGG - chr1_3:72214192-72214211 None:intergenic 45.0%
CATCTCCACCCAAAACCTTA+AGG - chr1_3:72214506-72214525 None:intergenic 45.0%
AGAAGTTGAAACAGTCCCTG+TGG - chr1_3:72214730-72214749 None:intergenic 45.0%
GTGCATTGAGGCAATTGGTT+TGG + chr1_3:72214794-72214813 Msa0138990:intron 45.0%
GAAAAGAGGGCTTAGGATCA+AGG - chr1_3:72214986-72215005 None:intergenic 45.0%
! TCTAACGGACAATCTAGGGA+TGG - chr1_3:72215097-72215116 None:intergenic 45.0%
GCTGGGATCTGCAATTAATG+AGG - chr1_3:72215562-72215581 None:intergenic 45.0%
ATTAATTGCAGATCCCAGCC+TGG + chr1_3:72215563-72215582 Msa0138990:intron 45.0%
!! TAGCATCGGGCTACGATTTT+GGG - chr1_3:72215665-72215684 None:intergenic 45.0%
!! ATAGCATCGGGCTACGATTT+TGG - chr1_3:72215666-72215685 None:intergenic 45.0%
!! TGTGTTTTCTAGCCACTGGA+TGG - chr1_3:72216098-72216117 None:intergenic 45.0%
TCTGATTTCTCATGTGGCAG+AGG + chr1_3:72216348-72216367 Msa0138990:intron 45.0%
GCTGTGCGATTCTATCCAAA+AGG + chr1_3:72216372-72216391 Msa0138990:CDS 45.0%
! AGGCATGAAGAAGGACCTTT+TGG - chr1_3:72216390-72216409 None:intergenic 45.0%
CACCACATGTATGCACACTA+AGG + chr1_3:72216656-72216675 Msa0138990:intron 45.0%
TAAAAGCTGAATGGGGACAG+GGG - chr1_3:72216794-72216813 None:intergenic 45.0%
CTAAAAGCTGAATGGGGACA+GGG - chr1_3:72216795-72216814 None:intergenic 45.0%
ACTAAAAGCTGAATGGGGAC+AGG - chr1_3:72216796-72216815 None:intergenic 45.0%
ACAGCTGACAGTCTCATATG+AGG + chr1_3:72216856-72216875 Msa0138990:intron 45.0%
!!! TCCTCAACTTTTAGCTCCAG+TGG + chr1_3:72216880-72216899 Msa0138990:CDS 45.0%
!!! ACTTTTAGCTCCAGTGGCAT+CGG + chr1_3:72216886-72216905 Msa0138990:CDS 45.0%
CAGATTATACCATGGAGAGG+AGG - chr1_3:72217637-72217656 None:intergenic 45.0%
CTGCAGATTATACCATGGAG+AGG - chr1_3:72217640-72217659 None:intergenic 45.0%
CTCTCCATGGTATAATCTGC+AGG + chr1_3:72217638-72217657 Msa0138990:intron 45.0%
AGTGCCTGCAGATTATACCA+TGG - chr1_3:72217645-72217664 None:intergenic 45.0%
GCACTGCAACCATTTCTTGA+AGG + chr1_3:72217660-72217679 Msa0138990:CDS 45.0%
TACGGTTATCATGCCAGTGT+TGG + chr1_3:72217827-72217846 Msa0138990:three_prime_UTR 45.0%
TGATTTCCATAAGAGCCGTG+AGG - chr1_3:72217887-72217906 None:intergenic 45.0%
CACGGCTCTTATGGAAATCA+TGG + chr1_3:72217887-72217906 Msa0138990:three_prime_UTR 45.0%
! GTATTTTCAGCAGTGCCACA+AGG - chr1_3:72217974-72217993 None:intergenic 45.0%
TAAGCTACCCTTCAAGACGT+TGG + chr1_3:72218010-72218029 Msa0138990:three_prime_UTR 45.0%
TGAGATGGTTTGACAAAGGC+AGG - chr1_3:72218098-72218117 None:intergenic 45.0%
TGCCTTTGTCAAACCATCTC+AGG + chr1_3:72218097-72218116 Msa0138990:three_prime_UTR 45.0%
GTCCTGAGATGGTTTGACAA+AGG - chr1_3:72218102-72218121 None:intergenic 45.0%
GGTATGGGCACATGACTTAT+AGG - chr1_3:72218134-72218153 None:intergenic 45.0%
! CAAGCGTTTTTCCCCTGTCA+TGG + chr1_3:72207148-72207167 Msa0138990:five_prime_UTR 50.0%
! GTTTTTCCCCTGTCATGGAG+TGG + chr1_3:72207153-72207172 Msa0138990:five_prime_UTR 50.0%
AATCCTGCCACTCCATGACA+GGG - chr1_3:72207163-72207182 None:intergenic 50.0%
GACCACTTGATCAACACCTG+CGG + chr1_3:72207742-72207761 Msa0138990:intron 50.0%
!! TACCGCAGGTGTTGATCAAG+TGG - chr1_3:72207747-72207766 None:intergenic 50.0%
!! ACATGACAAGGAAGTACCGC+AGG - chr1_3:72207761-72207780 None:intergenic 50.0%
TGTCCAACACTTCCTCAGGA+TGG + chr1_3:72207797-72207816 Msa0138990:intron 50.0%
! TCTCCATCCTGAGGAAGTGT+TGG - chr1_3:72207803-72207822 None:intergenic 50.0%
ACTTCCTCAGGATGGAGAAC+CGG + chr1_3:72207805-72207824 Msa0138990:intron 50.0%
CCTCACTACTGATACTGGTC+CGG - chr1_3:72207827-72207846 None:intergenic 50.0%
! CAGTAGTGAGGAAAGGTGTG+GGG + chr1_3:72207836-72207855 Msa0138990:intron 50.0%
AGTAGTGCTTGCAGTGAAGG+GGG + chr1_3:72208189-72208208 Msa0138990:intron 50.0%
GTGTCATGCCAATGCTGCAT+TGG + chr1_3:72208277-72208296 Msa0138990:intron 50.0%
CAGGACAAGTTCCGCACAAA+TGG - chr1_3:72208347-72208366 None:intergenic 50.0%
TCAATCGGATGGACAAACCG+AGG - chr1_3:72208409-72208428 None:intergenic 50.0%
! TCGGTTTGTCCATCCGATTG+AGG + chr1_3:72208408-72208427 Msa0138990:intron 50.0%
TCCATCCGATTGAGGATGGT+AGG + chr1_3:72208416-72208435 Msa0138990:intron 50.0%
ATCCGATTGAGGATGGTAGG+CGG + chr1_3:72208419-72208438 Msa0138990:intron 50.0%
TTCCGCCTACCATCCTCAAT+CGG - chr1_3:72208424-72208443 None:intergenic 50.0%
! TGCTTCAGCCACTTTAGCAC+TGG + chr1_3:72208569-72208588 Msa0138990:intron 50.0%
CACATCTTCCCAAATCTGCG+CGG + chr1_3:72208704-72208723 Msa0138990:intron 50.0%
ACATCTTCCCAAATCTGCGC+GGG + chr1_3:72208705-72208724 Msa0138990:intron 50.0%
CGGTGGATGATTTCGCTTGT+TGG + chr1_3:72208763-72208782 Msa0138990:intron 50.0%
CGTACATCACGTGACAGAGA+AGG + chr1_3:72208813-72208832 Msa0138990:intron 50.0%
CTATGTTGGGTGGTCATGCT+GGG - chr1_3:72208881-72208900 None:intergenic 50.0%
TCTATGTTGGGTGGTCATGC+TGG - chr1_3:72208882-72208901 None:intergenic 50.0%
AGAGTGAATGATGCTGGGTG+TGG + chr1_3:72208923-72208942 Msa0138990:intron 50.0%
AAATCAGGCAGGGCTAGAAC+CGG + chr1_3:72209482-72209501 Msa0138990:intron 50.0%
! AAGTGAAGGCAGTACTGGAC+TGG - chr1_3:72209694-72209713 None:intergenic 50.0%
CTCTCATCATGGTGTGCACA+TGG - chr1_3:72209726-72209745 None:intergenic 50.0%
GTGCACACCATGATGAGAGA+TGG + chr1_3:72209727-72209746 Msa0138990:intron 50.0%
GGCCATACCATCTCTCATCA+TGG - chr1_3:72209737-72209756 None:intergenic 50.0%
!! GAGGCTCTGAAAAGATGCAG+GGG + chr1_3:72209946-72209965 Msa0138990:intron 50.0%
! CTGAAAAGATGCAGGGGCAT+TGG + chr1_3:72209952-72209971 Msa0138990:intron 50.0%
!!! GAGTGGTTGGTGATGCCTTT+TGG - chr1_3:72209983-72210002 None:intergenic 50.0%
ACTGCATTCAGGACTCACCA+AGG - chr1_3:72210013-72210032 None:intergenic 50.0%
CCCTGATCGCAGATCCAATT+TGG + chr1_3:72210072-72210091 Msa0138990:intron 50.0%
TGGCTGTGTGGGTACCTATA+AGG + chr1_3:72210319-72210338 Msa0138990:intron 50.0%
CATGCCATCCCCTTACTTGA+AGG - chr1_3:72210367-72210386 None:intergenic 50.0%
CTTCAAGTAAGGGGATGGCA+TGG + chr1_3:72210365-72210384 Msa0138990:intron 50.0%
! GCATGGTCTTGGAACCTAGT+GGG + chr1_3:72210382-72210401 Msa0138990:intron 50.0%
TATGTACCCCATGGTGGCTA+AGG + chr1_3:72210789-72210808 Msa0138990:intron 50.0%
GAGACTGAGCAATTCTGGGT+TGG + chr1_3:72210869-72210888 Msa0138990:intron 50.0%
TGTTCAGAGTCTCCAATCGG+AGG + chr1_3:72211012-72211031 Msa0138990:intron 50.0%
!!! TTCGGGTGGGTTTTGAGGAA+TGG + chr1_3:72211038-72211057 Msa0138990:intron 50.0%
! TGAGGAATGGTTTCAGGTGG+TGG + chr1_3:72211051-72211070 Msa0138990:intron 50.0%
GCGAATCTGCATTTCAGCTC+TGG + chr1_3:72211179-72211198 Msa0138990:intron 50.0%
TGCTCTTGCAAGGCTGTTTG+AGG - chr1_3:72211373-72211392 None:intergenic 50.0%
CACGTGCTTATGCTCTTGCA+AGG - chr1_3:72211383-72211402 None:intergenic 50.0%
!! TTTGAGCTCTGAGGCTACCT+TGG - chr1_3:72211475-72211494 None:intergenic 50.0%
TTTGAATAGGGTGGGCCTTG+GGG + chr1_3:72211563-72211582 Msa0138990:intron 50.0%
CGGGCCTTAGAAATGGAGTT+TGG - chr1_3:72211606-72211625 None:intergenic 50.0%
GTTCACACGGGCCTTAGAAA+TGG - chr1_3:72211613-72211632 None:intergenic 50.0%
CGTGCATATGGAGAAAGACG+TGG - chr1_3:72211688-72211707 None:intergenic 50.0%
GTCTTTCTCCATATGCACGG+CGG + chr1_3:72211689-72211708 Msa0138990:intron 50.0%
ATGGTAAGACGGTGGTTGTC+CGG + chr1_3:72211714-72211733 Msa0138990:intron 50.0%
! GTTTTTCCCACCGGTAAGCT+GGG + chr1_3:72211875-72211894 Msa0138990:intron 50.0%
CTTCATGAGACCCAGCTTAC+CGG - chr1_3:72211888-72211907 None:intergenic 50.0%
CTACTCTCATCAACGCCTTC+TGG - chr1_3:72211952-72211971 None:intergenic 50.0%
! ATTCGGGTGTTGTCAGCCAT+GGG + chr1_3:72212053-72212072 Msa0138990:intron 50.0%
TGCTTTCATTGACCTCCCCA+TGG - chr1_3:72212072-72212091 None:intergenic 50.0%
CACATTCAGGAATTGGGACG+TGG - chr1_3:72212391-72212410 None:intergenic 50.0%
CGTCCCAATTCCTGAATGTG+TGG + chr1_3:72212391-72212410 Msa0138990:intron 50.0%
ACATGATGAGGAGGGACACT+TGG - chr1_3:72212425-72212444 None:intergenic 50.0%
CGAATGCAGGGTTAAGATGG+AGG + chr1_3:72212852-72212871 Msa0138990:five_prime_UTR 50.0%
TTCTGATCGTGAAGCCATCC+CGG + chr1_3:72212909-72212928 Msa0138990:five_prime_UTR 50.0%
ACAAACCTGACCTGTCGCAA+TGG + chr1_3:72213406-72213425 Msa0138990:five_prime_UTR 50.0%
ACTTCAAGGACCATTGCGAC+AGG - chr1_3:72213419-72213438 None:intergenic 50.0%
!! ATTTGGAGTGGGCTGCAAGA+AGG - chr1_3:72213575-72213594 None:intergenic 50.0%
ATCCATTGGCGATCTCTGGA+TGG + chr1_3:72213601-72213620 Msa0138990:CDS 50.0%
GCCCTTGTCAGTTACCTGTT+GGG - chr1_3:72213631-72213650 None:intergenic 50.0%
TGCCCTTGTCAGTTACCTGT+TGG - chr1_3:72213632-72213651 None:intergenic 50.0%
TCTGGGAACCAGTGTAAGGA+AGG - chr1_3:72214188-72214207 None:intergenic 50.0%
! TCTTGTGGTCCTGGAGCATT+TGG + chr1_3:72214539-72214558 Msa0138990:intron 50.0%
! CTTGTGGTCCTGGAGCATTT+GGG + chr1_3:72214540-72214559 Msa0138990:intron 50.0%
CATAATGTTGGGGAGTCCAG+GGG - chr1_3:72214585-72214604 None:intergenic 50.0%
GCATAATGTTGGGGAGTCCA+GGG - chr1_3:72214586-72214605 None:intergenic 50.0%
! GTAAAATGGGGGGTGCATTG+AGG + chr1_3:72214782-72214801 Msa0138990:intron 50.0%
!! TCTAGGGATGGAGCGTTGTT+AGG - chr1_3:72215085-72215104 None:intergenic 50.0%
TGGAGAACTGGAGAGAAGGT+TGG - chr1_3:72215415-72215434 None:intergenic 50.0%
!!! GACTTTTGGAGCTGGAGAAC+TGG - chr1_3:72215427-72215446 None:intergenic 50.0%
!! TTTTAGAGATGCGCCAGGCT+GGG - chr1_3:72215579-72215598 None:intergenic 50.0%
!! ATTTTAGAGATGCGCCAGGC+TGG - chr1_3:72215580-72215599 None:intergenic 50.0%
!! GCCTGGCGCATCTCTAAAAT+CGG + chr1_3:72215580-72215599 Msa0138990:intron 50.0%
!! TCCGATTTTAGAGATGCGCC+AGG - chr1_3:72215584-72215603 None:intergenic 50.0%
CGTAGCCCGATGCTATAGAT+CGG + chr1_3:72215670-72215689 Msa0138990:intron 50.0%
GTGCTCCGATCTATAGCATC+GGG - chr1_3:72215678-72215697 None:intergenic 50.0%
CGTGCTCCGATCTATAGCAT+CGG - chr1_3:72215679-72215698 None:intergenic 50.0%
AGGCAATTAGGTGGCCCAAT+AGG - chr1_3:72216603-72216622 None:intergenic 50.0%
GATAGGGACAGGCAATTAGG+TGG - chr1_3:72216612-72216631 None:intergenic 50.0%
CCTGATAGGGACAGGCAATT+AGG - chr1_3:72216615-72216634 None:intergenic 50.0%
CCTAATTGCCTGTCCCTATC+AGG + chr1_3:72216612-72216631 Msa0138990:intron 50.0%
! AGTCATGCACTGGCCTGATA+GGG - chr1_3:72216628-72216647 None:intergenic 50.0%
! TAGTCATGCACTGGCCTGAT+AGG - chr1_3:72216629-72216648 None:intergenic 50.0%
TATCAGGCCAGTGCATGACT+AGG + chr1_3:72216628-72216647 Msa0138990:intron 50.0%
GCCACTGGAGCTAAAAGTTG+AGG - chr1_3:72216884-72216903 None:intergenic 50.0%
! AGAGTACTTACCGATGCCAC+TGG - chr1_3:72216899-72216918 None:intergenic 50.0%
!! AGTGGCATCGGTAAGTACTC+TGG + chr1_3:72216898-72216917 Msa0138990:intron 50.0%
!! TCATGCCAGTGTTGGTTAGG+TGG + chr1_3:72217835-72217854 Msa0138990:three_prime_UTR 50.0%
TTCAGCAGTGCCACAAGGTT+GGG - chr1_3:72217969-72217988 None:intergenic 50.0%
TTTCAGCAGTGCCACAAGGT+TGG - chr1_3:72217970-72217989 None:intergenic 50.0%
GGAGCTTCTTAGTCCTGAGA+TGG - chr1_3:72218113-72218132 None:intergenic 50.0%
ATCCTGCCACTCCATGACAG+GGG - chr1_3:72207162-72207181 None:intergenic 55.0%
CAATCCTGCCACTCCATGAC+AGG - chr1_3:72207164-72207183 None:intergenic 55.0%
CCGGACCAGTATCAGTAGTG+AGG + chr1_3:72207824-72207843 Msa0138990:intron 55.0%
! TAGTGAGGAAAGGTGTGGGG+AGG + chr1_3:72207839-72207858 Msa0138990:intron 55.0%
ACCGGGTGTATCTTGGCAGA+CGG + chr1_3:72207913-72207932 Msa0138990:intron 55.0%
GCCTACCATCCTCAATCGGA+TGG - chr1_3:72208420-72208439 None:intergenic 55.0%
AGGATGGTAGGCGGAACTCA+TGG + chr1_3:72208428-72208447 Msa0138990:intron 55.0%
!! ACTGGCCTTCCTCCCTCTAA+TGG - chr1_3:72208669-72208688 None:intergenic 55.0%
TCCCAAATCTGCGCGGGAAT+CGG + chr1_3:72208711-72208730 Msa0138990:intron 55.0%
TCCGATTCCCGCGCAGATTT+GGG - chr1_3:72208715-72208734 None:intergenic 55.0%
TTCCGATTCCCGCGCAGATT+TGG - chr1_3:72208716-72208735 None:intergenic 55.0%
AGTGGCTGCAAAAGACCAGC+AGG + chr1_3:72208735-72208754 Msa0138990:intron 55.0%
CAAAAGACCAGCAGGAGCAG+CGG + chr1_3:72208743-72208762 Msa0138990:intron 55.0%
TGCTGGGATTGCTCGCACTA+AGG - chr1_3:72208865-72208884 None:intergenic 55.0%
TGAATGATGCTGGGTGTGGC+AGG + chr1_3:72208927-72208946 Msa0138990:intron 55.0%
!! GATGCGTCTGGTACTGGCAT+TGG - chr1_3:72209437-72209456 None:intergenic 55.0%
GAGACTGATGCGTCTGGTAC+TGG - chr1_3:72209443-72209462 None:intergenic 55.0%
GTAAGGGGATGGCATGGTCT+TGG + chr1_3:72210371-72210390 Msa0138990:intron 55.0%
! GGCATGGTCTTGGAACCTAG+TGG + chr1_3:72210381-72210400 Msa0138990:intron 55.0%
! TGGTCTTGGAACCTAGTGGG+AGG + chr1_3:72210385-72210404 Msa0138990:intron 55.0%
!! TGTGCTTGGCTCGGACCTTT+AGG + chr1_3:72210577-72210596 Msa0138990:intron 55.0%
ATCTGCGATGTGAGGGCCTA+AGG + chr1_3:72210663-72210682 Msa0138990:intron 55.0%
GGGCCTAAGGTCTGTAACCA+AGG + chr1_3:72210676-72210695 Msa0138990:intron 55.0%
GTCACTCCTTAGCCACCATG+GGG - chr1_3:72210798-72210817 None:intergenic 55.0%
GGTCACTCCTTAGCCACCAT+GGG - chr1_3:72210799-72210818 None:intergenic 55.0%
TGGTCACTCCTTAGCCACCA+TGG - chr1_3:72210800-72210819 None:intergenic 55.0%
! CGTGGCACTATGCGTTTTCG+TGG - chr1_3:72210955-72210974 None:intergenic 55.0%
CTCAATGGTTCTCACGGACG+TGG - chr1_3:72210973-72210992 None:intergenic 55.0%
TCAGAGTCTCCAATCGGAGG+AGG + chr1_3:72211015-72211034 Msa0138990:intron 55.0%
GTCTCCAATCGGAGGAGGTT+CGG + chr1_3:72211020-72211039 Msa0138990:intron 55.0%
TCTCCAATCGGAGGAGGTTC+GGG + chr1_3:72211021-72211040 Msa0138990:intron 55.0%
GTGGGCCTTGGGGATTCATA+TGG + chr1_3:72211573-72211592 Msa0138990:intron 55.0%
! TGGAGAAAGACGTGGTGCCA+TGG - chr1_3:72211680-72211699 None:intergenic 55.0%
ACCTCAGAACCGTCGAATCG+CGG + chr1_3:72211786-72211805 Msa0138990:intron 55.0%
GGTGGGAAAAACGCAGCTTC+CGG - chr1_3:72211867-72211886 None:intergenic 55.0%
! GGAAGCTGCGTTTTTCCCAC+CGG + chr1_3:72211866-72211885 Msa0138990:intron 55.0%
! CGTTTTTCCCACCGGTAAGC+TGG + chr1_3:72211874-72211893 Msa0138990:intron 55.0%
ATGAGACCCAGCTTACCGGT+GGG - chr1_3:72211884-72211903 None:intergenic 55.0%
! CATTCGGGTGTTGTCAGCCA+TGG + chr1_3:72212052-72212071 Msa0138990:intron 55.0%
! TTCGGGTGTTGTCAGCCATG+GGG + chr1_3:72212054-72212073 Msa0138990:intron 55.0%
ATCGTGAAGCCATCCCGGAA+TGG + chr1_3:72212914-72212933 Msa0138990:five_prime_UTR 55.0%
!! AAAGGGCATCCATTCCGGGA+TGG - chr1_3:72212926-72212945 None:intergenic 55.0%
TGCGACAGGTCAGGTTTGTC+TGG - chr1_3:72213405-72213424 None:intergenic 55.0%
AAGGACCATTGCGACAGGTC+AGG - chr1_3:72213414-72213433 None:intergenic 55.0%
GACCATCCAGAGATCGCCAA+TGG - chr1_3:72213606-72213625 None:intergenic 55.0%
CTCTGGATGGTCTTCCCAAC+AGG + chr1_3:72213614-72213633 Msa0138990:CDS 55.0%
TGCAGCATCTCCCTCTCTTG+TGG + chr1_3:72214524-72214543 Msa0138990:intron 55.0%
ATCTCCCTCTCTTGTGGTCC+TGG + chr1_3:72214530-72214549 Msa0138990:intron 55.0%
TGCTCCAGGACCACAAGAGA+GGG - chr1_3:72214537-72214556 None:intergenic 55.0%
ATGCTCCAGGACCACAAGAG+AGG - chr1_3:72214538-72214557 None:intergenic 55.0%
ACAACAGGCCCAAATGCTCC+AGG - chr1_3:72214551-72214570 None:intergenic 55.0%
GGCATAATGTTGGGGAGTCC+AGG - chr1_3:72214587-72214606 None:intergenic 55.0%
GAGCTGGAGAACTGGAGAGA+AGG - chr1_3:72215419-72215438 None:intergenic 55.0%
CCAGCTGCACTCTAAGCCAA+GGG - chr1_3:72215474-72215493 None:intergenic 55.0%
CCTTGGCTTAGAGTGCAGCT+GGG + chr1_3:72215472-72215491 Msa0138990:intron 55.0%
TGTGCCACCTAGTCATGCAC+TGG - chr1_3:72216638-72216657 None:intergenic 55.0%
AACCCGGAATCCCAACCTTG+TGG + chr1_3:72217956-72217975 Msa0138990:three_prime_UTR 55.0%
TGCCACAAGGTTGGGATTCC+GGG - chr1_3:72217961-72217980 None:intergenic 55.0%
GTGCCACAAGGTTGGGATTC+CGG - chr1_3:72217962-72217981 None:intergenic 55.0%
CATACGGACATCGTCGCGGT+CGG + chr1_3:72206889-72206908 Msa0138990:five_prime_UTR 60.0%
TTCCCCTGTCATGGAGTGGC+AGG + chr1_3:72207157-72207176 Msa0138990:five_prime_UTR 60.0%
CGCGTGTCCAACACTTCCTC+AGG + chr1_3:72207793-72207812 Msa0138990:intron 60.0%
TGGTCCGGTTCTCCATCCTG+AGG - chr1_3:72207812-72207831 None:intergenic 60.0%
CCCGTCTGCCAAGATACACC+CGG - chr1_3:72207917-72207936 None:intergenic 60.0%
CCGGGTGTATCTTGGCAGAC+GGG + chr1_3:72207914-72207933 Msa0138990:intron 60.0%
CGGGTGTATCTTGGCAGACG+GGG + chr1_3:72207915-72207934 Msa0138990:intron 60.0%
GGGTGTATCTTGGCAGACGG+GGG + chr1_3:72207916-72207935 Msa0138990:intron 60.0%
CAGTGAAGGGGGATCAGCTG+TGG + chr1_3:72208200-72208219 Msa0138990:intron 60.0%
GGCGGAACTCATGGCCAAAG+TGG + chr1_3:72208437-72208456 Msa0138990:intron 60.0%
ATCTGCGCGGGAATCGGAAG+TGG + chr1_3:72208717-72208736 Msa0138990:intron 60.0%
!! GGGGCATTGGAGAGCCCAAA+AGG + chr1_3:72209965-72209984 Msa0138990:intron 60.0%
CAATCGGAGGAGGTTCGGGT+GGG + chr1_3:72211025-72211044 Msa0138990:intron 60.0%
!! GGAGGTTCGGGTGGGTTTTG+AGG + chr1_3:72211033-72211052 Msa0138990:intron 60.0%
TACCATCGCCGCCGTGCATA+TGG - chr1_3:72211700-72211719 None:intergenic 60.0%
TCCGCGATTCGACGGTTCTG+AGG - chr1_3:72211790-72211809 None:intergenic 60.0%
CATGAGACCCAGCTTACCGG+TGG - chr1_3:72211885-72211904 None:intergenic 60.0%
GGGGTCACGGGAGAAACAAC+AGG - chr1_3:72214566-72214585 None:intergenic 60.0%
!! GTTGTTTCTCCCGTGACCCC+TGG + chr1_3:72214566-72214585 Msa0138990:intron 60.0%
! GGGGGGTGCATTGAGGCAAT+TGG + chr1_3:72214789-72214808 Msa0138990:intron 60.0%
CCCTTGGCTTAGAGTGCAGC+TGG + chr1_3:72215471-72215490 Msa0138990:intron 60.0%
CCCAGCTGCACTCTAAGCCA+AGG - chr1_3:72215475-72215494 None:intergenic 60.0%
! TGCACTGGCCTGATAGGGAC+AGG - chr1_3:72216623-72216642 None:intergenic 60.0%
CAGGCCAGTGCATGACTAGG+TGG + chr1_3:72216631-72216650 Msa0138990:intron 60.0%
GGGGACAGGGGAGGAGAAAA+TGG - chr1_3:72216782-72216801 None:intergenic 60.0%
AAGCTGAATGGGGACAGGGG+AGG - chr1_3:72216791-72216810 None:intergenic 60.0%
AAGACCAGCAGGAGCAGCGG+TGG + chr1_3:72208746-72208765 Msa0138990:intron 65.0%
TCATCCACCGCTGCTCCTGC+TGG - chr1_3:72208753-72208772 None:intergenic 65.0%
CCACCCGAACCTCCTCCGAT+TGG - chr1_3:72211027-72211046 None:intergenic 65.0%
CCAATCGGAGGAGGTTCGGG+TGG + chr1_3:72211024-72211043 Msa0138990:intron 65.0%
CTCCATATGCACGGCGGCGA+TGG + chr1_3:72211695-72211714 Msa0138990:intron 65.0%
GCACGGCGGCGATGGTAAGA+CGG + chr1_3:72211703-72211722 Msa0138990:intron 65.0%
! GGGTGTTGTCAGCCATGGGG+AGG + chr1_3:72212057-72212076 Msa0138990:intron 65.0%
TTGGGGAGTCCAGGGGTCAC+GGG - chr1_3:72214578-72214597 None:intergenic 65.0%
GTTGGGGAGTCCAGGGGTCA+CGG - chr1_3:72214579-72214598 None:intergenic 65.0%
CGTCGCGGTCGGAGAGCAGA+AGG + chr1_3:72206900-72206919 Msa0138990:five_prime_UTR 70.0%
CGGCGGCGATGGTAAGACGG+TGG + chr1_3:72211706-72211725 Msa0138990:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 72206848 72218215 72206848 ID=Msa0138990;Name=Msa0138990
chr1_3 mRNA 72206848 72218215 72206848 ID=Msa0138990-mRNA-1;Parent=Msa0138990;Name=Msa0138990-mRNA-1;_AED=0.12;_eAED=0.12;_QI=827|1|1|1|0.4|0.33|6|478|92
chr1_3 exon 72206848 72207186 72206848 ID=Msa0138990-mRNA-1:exon:25222;Parent=Msa0138990-mRNA-1
chr1_3 exon 72212609 72212960 72212609 ID=Msa0138990-mRNA-1:exon:25223;Parent=Msa0138990-mRNA-1
chr1_3 exon 72213396 72213635 72213396 ID=Msa0138990-mRNA-1:exon:25224;Parent=Msa0138990-mRNA-1
chr1_3 exon 72216368 72216416 72216368 ID=Msa0138990-mRNA-1:exon:25225;Parent=Msa0138990-mRNA-1
chr1_3 exon 72216860 72216907 72216860 ID=Msa0138990-mRNA-1:exon:25226;Parent=Msa0138990-mRNA-1
chr1_3 exon 72217660 72218215 72217660 ID=Msa0138990-mRNA-1:exon:25227;Parent=Msa0138990-mRNA-1
chr1_3 five_prime_UTR 72206848 72207186 72206848 ID=Msa0138990-mRNA-1:five_prime_utr;Parent=Msa0138990-mRNA-1
chr1_3 five_prime_UTR 72212609 72212960 72212609 ID=Msa0138990-mRNA-1:five_prime_utr;Parent=Msa0138990-mRNA-1
chr1_3 five_prime_UTR 72213396 72213531 72213396 ID=Msa0138990-mRNA-1:five_prime_utr;Parent=Msa0138990-mRNA-1
chr1_3 CDS 72213532 72213635 72213532 ID=Msa0138990-mRNA-1:cds;Parent=Msa0138990-mRNA-1
chr1_3 CDS 72216368 72216416 72216368 ID=Msa0138990-mRNA-1:cds;Parent=Msa0138990-mRNA-1
chr1_3 CDS 72216860 72216907 72216860 ID=Msa0138990-mRNA-1:cds;Parent=Msa0138990-mRNA-1
chr1_3 CDS 72217660 72217737 72217660 ID=Msa0138990-mRNA-1:cds;Parent=Msa0138990-mRNA-1
chr1_3 three_prime_UTR 72217738 72218215 72217738 ID=Msa0138990-mRNA-1:three_prime_utr;Parent=Msa0138990-mRNA-1
Gene Sequence

>Msa0138990

ATGCTCTTTACAATTAGTATTTTGTATTCATGTTTTATTGCCTTCTTGCAGCCCACTCCAAATCAGAAAATCCATTGGCGATCTCTGGATGGTCTTCCCAACAGAGGTGCTGTGCGATTCTATCCAAAAGGTCCTTCTTCATGCCTTGTAGAACTGACAGTCTCATATGAGGTTCCTCAACTTTTAGCTCCAGTGGCATCGGCACTGCAACCATTTCTTGAAGGTTTACTTAAACGTGGTTTGGAAAGATTTGCCACGTTTGCAAAAAGCTACAAATGA
Protein sequence

>Msa0138990

MLFTISILYSCFIAFLQPTPNQKIHWRSLDGLPNRGAVRFYPKGPSSCLVELTVSYEVPQLLAPVASALQPFLEGLLKRGLERFATFAKSYK*