AlfalfaGEDB | Msa0054240

M. sativa cultivar zhongmu-4 / Msa0054240

KEGG: -
GO: -
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0054240	sp\|Q9SAH7\|WRK40_ARATH	43.223	273	123	7	4	254	32	294	8.10e-65	207

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0054240	G7I7M7	96.591	264	8	1	2	264	22	285	0.0	532

TFs/TRs:

Gene ID	Type	Classification
Msa0054240	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0054240	Msa0054250	0.858113	1.029389e-62	-8.615850e-47
Msa0054240	Msa0054310	0.823272	1.514359e-53	-8.615850e-47
Msa0054240	Msa0054320	0.846766	1.767657e-59	-8.615850e-47
Msa0054240	Msa0054330	0.995286	8.932419e-215	-8.615850e-47
Msa0054240	Msa0055710	0.820094	8.226159e-53	-8.615850e-47
Msa0054240	Msa0100070	0.982881	3.014256e-156	-8.615850e-47
Msa0054240	Msa0100080	0.825193	5.355706e-54	-8.615850e-47
Msa0054240	Msa0141230	0.833384	5.502407e-56	-8.615850e-47
Msa0054240	Msa0148720	0.825823	3.798741e-54	-8.615850e-47
Msa0054240	Msa0506300	0.813516	2.460958e-51	-8.615850e-47
Msa0054240	Msa0559250	0.824035	1.003642e-53	-8.615850e-47
Msa0054240	Msa0568440	0.800289	1.545178e-48	-8.615850e-47
Msa0054240	Msa0607180	0.814201	1.737845e-51	-8.615850e-47
Msa0054240	Msa0647360	0.825963	3.519195e-54	-8.615850e-47
Msa0054240	Msa0696740	0.829840	4.110801e-55	-8.615850e-47
Msa0054240	Msa0696770	0.829283	5.613105e-55	-8.615850e-47
Msa0054240	Msa1026500	0.848078	7.706913e-60	-8.615850e-47
Msa0054240	Msa1026510	0.857327	1.760184e-62	-8.615850e-47
Msa0054240	Msa1074570	0.832736	7.972158e-56	-8.615850e-47
Msa0054240	Msa1074580	0.861781	8.059190e-64	-8.615850e-47
Msa0054240	Msa1107800	0.820722	5.903635e-53	-8.615850e-47
Msa0054240	Msa1111750	0.848440	6.123136e-60	-8.615850e-47
Msa0054240	Msa1111760	0.848243	6.937312e-60	-8.615850e-47
Msa0054240	Msa1154070	0.843353	1.475961e-58	-8.615850e-47
Msa0054240	Msa1154080	0.860203	2.433490e-63	-8.615850e-47
Msa0054240	Msa1156180	0.802189	6.312769e-49	-8.615850e-47
Msa0054240	Msa1177070	0.806124	9.577862e-50	-8.615850e-47
Msa0054240	Msa1179120	0.800468	1.421290e-48	-8.615850e-47
Msa0054240	Msa1316980	0.803284	3.751760e-49	-8.615850e-47
Msa0054240	Msa1381940	0.828646	8.007656e-55	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0054240	MtrunA17_Chr1g0150281	96.591	264	8	1	2	264	22	285	0.0	532
Msa0054240	MtrunA17_Chr3g0136961	59.480	269	85	8	2	255	27	286	2.36e-94	279
Msa0054240	MtrunA17_Chr2g0333851	46.494	271	111	5	4	255	58	313	2.84e-67	211
Msa0054240	MtrunA17_Chr4g0001361	42.086	278	127	8	1	255	48	314	4.48e-52	172
Msa0054240	MtrunA17_Chr1g0150271	38.306	248	122	6	26	256	5	238	2.84e-42	145
Msa0054240	MtrunA17_Chr7g0270831	29.126	309	155	7	4	254	99	401	3.58e-29	114
Msa0054240	MtrunA17_Chr2g0288871	32.864	213	99	4	8	176	150	362	1.68e-27	110
Msa0054240	MtrunA17_Chr3g0099641	33.010	206	80	5	104	251	236	441	5.32e-25	103
Msa0054240	MtrunA17_Chr4g0075201	30.000	220	105	5	5	185	124	333	1.18e-24	102
Msa0054240	MtrunA17_Chr4g0051181	52.564	78	37	0	99	176	223	300	4.58e-24	100
Msa0054240	MtrunA17_Chr4g0060271	56.000	75	33	0	102	176	238	312	8.31e-24	100
Msa0054240	MtrunA17_Chr2g0322391	48.889	90	46	0	104	193	334	423	1.84e-23	99.4
Msa0054240	MtrunA17_Chr7g0216891	46.739	92	49	0	102	193	202	293	2.13e-23	99.0
Msa0054240	MtrunA17_Chr2g0302391	41.739	115	56	3	71	176	156	268	7.44e-23	96.7
Msa0054240	MtrunA17_Chr4g0025061	36.184	152	82	4	45	195	299	436	9.94e-21	91.3
Msa0054240	MtrunA17_Chr4g0025051	48.148	81	42	0	96	176	312	392	1.39e-20	90.9
Msa0054240	MtrunA17_Chr1g0194481	41.667	96	51	2	103	198	146	236	1.56e-19	86.3
Msa0054240	MtrunA17_Chr5g0445311	57.895	57	23	1	120	176	365	420	1.86e-19	87.4
Msa0054240	MtrunA17_Chr5g0445311	34.862	109	62	3	75	176	149	255	9.15e-11	61.6
Msa0054240	MtrunA17_Chr7g0270191	49.351	77	36	2	100	176	128	201	1.93e-19	85.5
Msa0054240	MtrunA17_Chr3g0101131	39.286	112	59	4	71	176	363	471	2.10e-19	87.4
Msa0054240	MtrunA17_Chr5g0401821	54.386	57	26	0	120	176	200	256	2.32e-19	85.1
Msa0054240	MtrunA17_Chr5g0447701	52.703	74	32	2	104	177	239	309	2.54e-19	86.7
Msa0054240	MtrunA17_Chr5g0443131	47.297	74	34	2	103	176	145	213	4.27e-19	85.1
Msa0054240	MtrunA17_Chr4g0053281	50.769	65	32	0	120	184	267	331	4.61e-19	85.1
Msa0054240	MtrunA17_Chr4g0051881	57.895	57	23	1	120	176	179	234	4.94e-19	85.1
Msa0054240	MtrunA17_Chr5g0418781	42.308	104	48	4	79	176	83	180	5.61e-19	84.0
Msa0054240	MtrunA17_Chr1g0184691	49.315	73	35	1	107	177	279	351	6.40e-19	85.1
Msa0054240	MtrunA17_Chr1g0147881	36.538	104	55	1	73	176	227	319	1.38e-18	84.0
Msa0054240	MtrunA17_Chr5g0432161	41.935	93	47	4	85	176	391	477	3.69e-18	84.0
Msa0054240	MtrunA17_Chr5g0432161	50.877	57	26	2	120	176	245	299	1.30e-13	70.5
Msa0054240	MtrunA17_Chr7g0263531	50.746	67	32	1	110	176	352	417	3.83e-18	83.6
Msa0054240	MtrunA17_Chr7g0263531	53.333	75	26	4	120	187	190	262	1.62e-16	78.6
Msa0054240	MtrunA17_Chr2g0294231	47.297	74	34	2	103	176	191	259	4.35e-18	82.8
Msa0054240	MtrunA17_Chr4g0042831	46.341	82	38	3	95	176	259	334	4.61e-18	82.8
Msa0054240	MtrunA17_Chr4g0042831	47.368	57	29	1	120	176	146	201	7.45e-11	61.6
Msa0054240	MtrunA17_Chr5g0418191	45.122	82	39	3	95	176	301	376	4.87e-18	83.2
Msa0054240	MtrunA17_Chr5g0418191	54.386	57	24	2	120	176	152	206	4.08e-14	71.6
Msa0054240	MtrunA17_Chr7g0228941	52.632	57	27	0	120	176	53	109	7.71e-18	77.4
Msa0054240	MtrunA17_Chr7g0218081	34.677	124	75	3	53	176	349	466	9.84e-18	82.4
Msa0054240	MtrunA17_Chr7g0218081	49.123	57	27	2	120	176	229	283	2.20e-11	63.5
Msa0054240	MtrunA17_Chr1g0188941	50.877	57	27	1	120	176	52	107	1.18e-17	76.6
Msa0054240	MtrunA17_Chr7g0238921	49.333	75	37	1	120	194	125	198	3.22e-17	79.7
Msa0054240	MtrunA17_Chr3g0106491	46.575	73	36	2	104	176	352	421	4.58e-17	80.5
Msa0054240	MtrunA17_Chr3g0106491	52.632	57	25	2	120	176	199	253	8.79e-14	70.9
Msa0054240	MtrunA17_Chr8g0379461	51.724	58	28	0	120	177	77	134	5.77e-17	77.8
Msa0054240	MtrunA17_Chr4g0004911	41.304	92	48	3	85	176	307	392	1.13e-16	79.3
Msa0054240	MtrunA17_Chr4g0004911	49.123	57	28	1	120	176	185	240	2.06e-13	69.7
Msa0054240	MtrunA17_Chr1g0150801	50.877	57	27	1	120	176	103	158	1.21e-16	75.1
Msa0054240	MtrunA17_Chr7g0249301	42.857	84	42	3	93	176	271	348	1.71e-16	78.2
Msa0054240	MtrunA17_Chr2g0284321	49.123	57	29	0	120	176	36	92	2.46e-16	75.9
Msa0054240	MtrunA17_Chr3g0139021	52.632	57	27	0	120	176	315	371	2.54e-16	77.8
Msa0054240	MtrunA17_Chr4g0071521	50.000	58	29	0	120	177	246	303	2.57e-16	77.4
Msa0054240	MtrunA17_Chr3g0079691	34.921	126	70	4	104	220	482	604	2.80e-16	78.2
Msa0054240	MtrunA17_Chr3g0079691	50.877	57	26	2	120	176	281	335	5.38e-12	65.5
Msa0054240	MtrunA17_Chr7g0224801	51.613	62	29	1	120	181	94	154	3.79e-16	74.3
Msa0054240	MtrunA17_Chr3g0129361	52.632	57	26	1	120	176	145	200	5.34e-16	74.7
Msa0054240	MtrunA17_Chr8g0383351	52.632	57	26	1	120	176	161	216	5.99e-16	75.1
Msa0054240	MtrunA17_Chr2g0289181	33.607	122	74	3	120	234	15	136	7.51e-16	74.7
Msa0054240	MtrunA17_Chr7g0243891	45.205	73	37	2	104	176	361	430	8.18e-16	76.6
Msa0054240	MtrunA17_Chr7g0243891	49.123	57	27	2	120	176	217	271	1.70e-11	63.9
Msa0054240	MtrunA17_Chr7g0249311	32.911	158	88	7	93	242	371	518	1.16e-15	76.6
Msa0054240	MtrunA17_Chr4g0068541	45.205	73	37	2	104	176	195	264	1.37e-15	75.9
Msa0054240	MtrunA17_Chr2g0319961	52.632	57	27	0	120	176	81	137	1.72e-15	74.3
Msa0054240	MtrunA17_Chr8g0335811	52.632	57	26	1	120	176	155	210	1.72e-15	73.6
Msa0054240	MtrunA17_Chr2g0293481	42.857	77	39	1	105	176	248	324	9.56e-15	73.6
Msa0054240	MtrunA17_Chr4g0074001	49.123	57	28	1	120	176	360	415	1.30e-14	73.2
Msa0054240	MtrunA17_Chr8g0386241	45.161	62	33	1	120	181	104	164	1.62e-14	70.1
Msa0054240	MtrunA17_Chr8g0387501	47.458	59	31	0	118	176	128	186	1.79e-14	71.6
Msa0054240	MtrunA17_Chr3g0129321	49.123	57	28	1	120	176	119	174	2.68e-14	69.7
Msa0054240	MtrunA17_Chr4g0024391	35.870	92	59	0	104	195	214	305	4.90e-14	71.6
Msa0054240	MtrunA17_Chr8g0348311	45.614	57	31	0	120	176	156	212	5.50e-14	70.9
Msa0054240	MtrunA17_Chr8g0383251	31.343	134	77	5	46	176	43	164	6.62e-14	68.2
Msa0054240	MtrunA17_Chr7g0270051	47.368	57	30	0	120	176	54	110	8.29e-14	69.3
Msa0054240	MtrunA17_Chr7g0248721	52.459	61	27	2	120	180	142	200	8.96e-14	68.6
Msa0054240	MtrunA17_Chr7g0248691	47.368	57	30	0	120	176	155	211	1.15e-13	69.7
Msa0054240	MtrunA17_Chr6g0485431	39.773	88	47	4	91	177	130	212	1.23e-13	69.7
Msa0054240	MtrunA17_Chr1g0189391	37.234	94	53	4	85	177	67	155	6.07e-13	67.8
Msa0054240	MtrunA17_Chr1g0202461	36.842	76	48	0	120	195	262	337	6.20e-13	67.8
Msa0054240	MtrunA17_Chr8g0387981	50.877	57	26	1	120	174	133	189	5.67e-12	65.1
Msa0054240	MtrunA17_Chr5g0447711	46.479	71	36	2	106	176	218	286	5.80e-12	64.7
Msa0054240	MtrunA17_Chr3g0126391	50.877	57	26	1	120	174	134	190	9.10e-12	64.3
Msa0054240	MtrunA17_Chr7g0275531	41.975	81	43	2	104	182	105	183	2.57e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0054240	AT1G80840.1	43.223	273	123	7	4	254	32	294	8.23e-66	207
Msa0054240	AT4G31800.1	43.657	268	129	8	5	258	49	308	1.00e-59	192
Msa0054240	AT2G25000.2	41.825	263	108	7	4	258	1	226	1.74e-59	188
Msa0054240	AT2G25000.4	41.825	263	108	7	4	258	1	226	1.74e-59	188
Msa0054240	AT2G25000.1	41.825	263	108	7	4	258	44	269	6.32e-59	188
Msa0054240	AT2G25000.3	41.825	263	108	7	4	258	23	248	8.42e-59	187
Msa0054240	AT4G31800.2	54.706	170	67	4	91	258	82	243	2.68e-53	173
Msa0054240	AT4G31800.3	41.765	170	76	4	5	156	49	213	2.05e-32	119
Msa0054240	AT4G01720.1	33.503	197	98	4	8	176	105	296	1.61e-24	102
Msa0054240	AT4G04450.2	48.913	92	47	0	104	195	183	274	1.69e-24	101
Msa0054240	AT4G04450.1	48.913	92	47	0	104	195	277	368	3.58e-24	101
Msa0054240	AT1G68150.1	49.485	97	48	1	95	190	210	306	4.24e-24	100
Msa0054240	AT4G22070.4	54.795	73	33	0	104	176	282	354	4.48e-23	98.6
Msa0054240	AT4G22070.3	54.795	73	33	0	104	176	282	354	4.48e-23	98.6
Msa0054240	AT4G22070.2	54.795	73	33	0	104	176	282	354	4.48e-23	98.6
Msa0054240	AT4G22070.1	54.795	73	33	0	104	176	282	354	4.48e-23	98.6
Msa0054240	AT1G62300.1	54.795	73	33	0	104	176	297	369	7.72e-23	97.8
Msa0054240	AT5G15130.2	52.703	74	35	0	120	193	186	259	2.90e-22	95.9
Msa0054240	AT5G15130.1	52.703	74	35	0	120	193	228	301	3.74e-22	95.9
Msa0054240	AT1G18860.1	64.912	57	20	0	120	176	240	296	1.42e-21	94.0
Msa0054240	AT1G29860.1	53.333	60	27	1	117	176	134	192	4.66e-19	84.7
Msa0054240	AT4G18170.1	53.333	60	27	1	117	176	170	228	4.84e-19	85.1
Msa0054240	AT1G64000.1	57.377	61	25	1	120	180	115	174	4.89e-19	82.8
Msa0054240	AT2G04880.2	57.627	59	24	1	118	176	282	339	1.24e-18	85.5
Msa0054240	AT2G47260.1	55.000	60	26	1	117	176	172	230	1.27e-18	84.3
Msa0054240	AT5G07100.2	38.614	101	58	3	76	176	101	197	1.38e-18	82.0
Msa0054240	AT5G07100.2	46.479	71	37	1	106	176	11	80	4.65e-14	69.7
Msa0054240	AT5G07100.4	38.614	101	58	3	76	176	101	197	1.38e-18	82.0
Msa0054240	AT5G07100.4	46.479	71	37	1	106	176	11	80	4.65e-14	69.7
Msa0054240	AT5G07100.5	38.614	101	58	3	76	176	101	197	1.38e-18	82.0
Msa0054240	AT5G07100.5	46.479	71	37	1	106	176	11	80	4.65e-14	69.7
Msa0054240	AT5G07100.3	38.614	101	58	3	76	176	101	197	1.38e-18	82.0
Msa0054240	AT5G07100.3	46.479	71	37	1	106	176	11	80	4.65e-14	69.7
Msa0054240	AT2G04880.1	57.627	59	24	1	118	176	306	363	1.46e-18	85.1
Msa0054240	AT5G26170.1	50.877	57	27	1	120	176	114	169	1.49e-18	80.9
Msa0054240	AT5G41570.1	57.377	61	25	1	120	180	99	158	2.07e-18	80.9
Msa0054240	AT4G26640.5	49.315	73	34	2	104	176	192	261	2.72e-18	84.0
Msa0054240	AT4G26640.6	49.315	73	34	2	104	176	192	261	2.72e-18	84.0
Msa0054240	AT4G26640.4	49.315	73	34	2	104	176	192	261	2.72e-18	84.0
Msa0054240	AT4G26640.3	49.315	73	34	2	104	176	192	261	2.72e-18	84.0
Msa0054240	AT1G13960.2	45.122	82	39	3	95	176	237	312	3.09e-18	83.6
Msa0054240	AT1G13960.2	52.632	57	25	2	120	176	77	131	4.77e-13	68.6
Msa0054240	AT4G26640.1	49.315	73	34	2	104	176	296	365	4.17e-18	84.0
Msa0054240	AT4G26640.7	49.315	73	34	2	104	176	328	397	4.34e-18	84.0
Msa0054240	AT4G26640.2	56.140	57	24	1	120	176	382	437	4.66e-18	84.0
Msa0054240	AT5G46350.1	47.222	72	33	2	105	176	173	239	5.77e-18	82.4
Msa0054240	AT2G03340.1	45.122	82	39	3	95	176	396	471	5.79e-18	83.6
Msa0054240	AT2G03340.1	52.632	57	25	2	120	176	251	305	9.22e-14	71.2
Msa0054240	AT5G49520.1	47.222	72	34	2	120	188	222	292	6.58e-18	82.8
Msa0054240	AT1G13960.1	45.122	82	39	3	95	176	390	465	6.62e-18	83.2
Msa0054240	AT1G13960.1	52.632	57	25	2	120	176	230	284	5.89e-13	68.6
Msa0054240	AT5G07100.1	38.614	101	58	3	76	176	194	290	6.89e-18	82.0
Msa0054240	AT5G07100.1	46.479	71	37	1	106	176	104	173	1.62e-13	69.7
Msa0054240	AT4G31550.1	52.632	57	27	0	120	176	247	303	6.96e-18	82.0
Msa0054240	AT4G31550.2	52.632	57	27	0	120	176	246	302	7.10e-18	82.0
Msa0054240	AT2G30590.1	54.386	57	26	0	120	176	314	370	7.43e-18	82.4
Msa0054240	AT1G69810.2	50.000	74	36	1	104	176	130	203	1.96e-17	80.9
Msa0054240	AT1G69810.1	50.000	74	36	1	104	176	188	261	2.45e-17	81.3
Msa0054240	AT3G62340.1	51.562	64	30	1	113	176	112	174	2.70e-17	79.7
Msa0054240	AT1G69310.4	54.386	57	25	1	120	176	148	203	2.80e-17	80.1
Msa0054240	AT1G69310.2	54.386	57	25	1	120	176	148	203	2.80e-17	80.1
Msa0054240	AT1G69310.1	54.386	57	25	1	120	176	148	203	2.80e-17	80.1
Msa0054240	AT5G56270.1	47.945	73	35	2	104	176	474	543	4.25e-17	81.3
Msa0054240	AT5G56270.1	30.137	146	94	4	31	176	191	328	1.69e-11	64.7
Msa0054240	AT2G23320.1	49.123	57	29	0	120	176	241	297	4.28e-17	79.7
Msa0054240	AT2G24570.1	52.632	57	27	0	120	176	244	300	4.77e-17	79.7
Msa0054240	AT5G13080.1	53.226	62	28	1	120	181	68	128	5.50e-17	76.3
Msa0054240	AT3G01080.1	43.902	82	40	3	95	176	287	362	6.93e-17	80.1
Msa0054240	AT3G01080.1	49.123	57	27	2	120	176	168	222	7.81e-11	62.4
Msa0054240	AT5G28650.1	43.023	86	41	2	107	190	248	327	7.52e-17	79.3
Msa0054240	AT3G01080.2	46.575	73	36	2	104	176	331	400	8.45e-17	80.1
Msa0054240	AT3G01080.2	49.123	57	27	2	120	176	206	260	8.10e-11	62.4
Msa0054240	AT1G29280.1	50.877	57	28	0	120	176	75	131	8.92e-17	78.2
Msa0054240	AT4G24240.1	48.276	58	30	0	120	177	282	339	1.50e-16	78.6
Msa0054240	AT3G04670.1	44.444	72	38	1	107	176	248	319	2.02e-16	78.2
Msa0054240	AT2G38470.1	45.205	73	37	2	104	176	349	418	2.68e-16	78.6
Msa0054240	AT2G38470.1	52.632	57	25	2	120	176	185	239	1.02e-13	70.9
Msa0054240	AT2G44745.1	52.632	57	26	1	120	176	146	201	1.20e-15	74.3
Msa0054240	AT3G01970.1	49.180	61	30	1	120	180	66	125	1.43e-15	72.4
Msa0054240	AT4G30935.1	45.455	66	35	1	111	176	323	387	1.60e-15	76.3
Msa0054240	AT2G30250.1	45.205	73	37	2	104	176	315	384	1.99e-15	75.9
Msa0054240	AT2G30250.1	46.479	71	34	3	120	190	167	233	2.53e-11	63.5
Msa0054240	AT2G37260.3	45.588	68	36	1	109	176	259	325	4.78e-15	74.3
Msa0054240	AT2G37260.3	45.070	71	37	2	106	176	72	140	1.29e-14	73.2
Msa0054240	AT2G37260.2	45.588	68	36	1	109	176	257	323	5.05e-15	74.3
Msa0054240	AT2G37260.2	45.070	71	37	2	106	176	70	138	1.30e-14	73.2
Msa0054240	AT2G37260.1	45.588	68	36	1	109	176	339	405	5.10e-15	74.7
Msa0054240	AT2G37260.1	45.070	71	37	2	106	176	152	220	1.32e-14	73.6
Msa0054240	AT1G55600.1	50.000	62	30	1	120	181	308	368	5.43e-15	74.7
Msa0054240	AT2G34830.1	47.692	65	34	0	112	176	208	272	7.06e-15	74.3
Msa0054240	AT2G34830.2	47.692	65	34	0	112	176	217	281	7.09e-15	74.3
Msa0054240	AT4G39410.1	50.877	57	27	1	120	176	224	279	1.05e-14	72.8
Msa0054240	AT2G21900.1	44.444	72	38	2	106	176	95	165	1.13e-14	71.2
Msa0054240	AT1G30650.1	47.692	65	34	0	112	176	210	274	1.43e-14	73.2
Msa0054240	AT3G58710.1	49.123	57	29	0	120	176	72	128	2.38e-14	71.6
Msa0054240	AT3G58710.2	49.123	57	29	0	120	176	71	127	2.42e-14	71.6
Msa0054240	AT5G64810.1	45.614	57	30	1	120	176	111	166	7.78e-14	68.6
Msa0054240	AT4G01250.1	45.614	57	31	0	120	176	129	185	9.33e-14	70.1
Msa0054240	AT2G46130.1	50.877	57	27	1	120	176	31	86	9.75e-14	66.2
Msa0054240	AT5G43290.1	40.789	76	43	2	101	176	97	170	1.55e-13	69.3
Msa0054240	AT5G52830.1	49.123	57	29	0	120	176	166	222	1.79e-13	69.7
Msa0054240	AT4G26440.1	43.836	73	38	2	104	176	359	428	1.97e-13	70.1
Msa0054240	AT4G26440.1	47.368	57	28	2	120	176	179	233	7.81e-11	62.4
Msa0054240	AT5G45050.2	34.951	103	64	1	74	176	1110	1209	3.21e-13	69.7
Msa0054240	AT5G45050.1	34.951	103	64	1	74	176	1138	1237	3.63e-13	69.7
Msa0054240	AT5G45050.4	34.951	103	64	1	74	176	999	1098	3.81e-13	69.7
Msa0054240	AT1G69310.3	50.877	57	23	2	120	176	148	199	7.75e-13	67.4
Msa0054240	AT4G23550.1	30.000	140	89	3	118	255	139	271	1.32e-12	67.0
Msa0054240	AT2G46400.1	43.836	73	37	2	104	174	91	161	4.14e-12	65.5
Msa0054240	AT3G01080.3	49.123	57	27	2	120	176	206	260	7.94e-11	62.0
Msa0054240	AT5G24110.1	27.778	162	99	5	30	174	10	170	8.90e-11	61.6

Find 44 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCTATTTCTGGAAGAATTT+TGG	0.107436	1_2:+8974876	Msa0054240:CDS
GCACTTGCCACTGCTATTTC+TGG	0.167473	1_2:+8974865	Msa0054240:CDS
AATTGCTGGATAGATGATTT+TGG	0.173303	1_2:-8974790	None:intergenic
TGGAACATTATCAAGCTTAA+TGG	0.220468	1_2:-8974770	None:intergenic
TTCCTCACCTAAGGCTTATA+AGG	0.237117	1_2:+8973678	Msa0054240:CDS
TCTTTCTTGATTGTTGTGTT+TGG	0.315541	1_2:-8973528	None:intergenic
GCAAGTGCTGTAGTGAAATT+AGG	0.319456	1_2:-8974850	None:intergenic
CAAAGTGAAGAAGCTCCTTT+AGG	0.328438	1_2:+8974697	Msa0054240:CDS
GGATATCAATGGAGGAAATA+TGG	0.328462	1_2:+8973913	Msa0054240:CDS
AATATGTTTGATACTGTTAG+AGG	0.330331	1_2:+8973577	Msa0054240:CDS
ATTTGTTCTTATTAGAAGTA+TGG	0.343403	1_2:-8974900	None:intergenic
TTATGTGCAGGACGAAGTTT+TGG	0.348061	1_2:+8973381	Msa0054240:intron
CCTCTCCTAGAGCTTACTTT+AGG	0.371319	1_2:+8973959	Msa0054240:CDS
TATGTTGCAACTAGTATAGT+AGG	0.404321	1_2:-8974619	None:intergenic
ATGAAGAATCATTAATCAAA+AGG	0.454669	1_2:+8973641	Msa0054240:CDS
CTAAAGGAGCTTCTTCACTT+TGG	0.478227	1_2:-8974696	None:intergenic
ATACTTCTAATAAGAACAAA+TGG	0.482703	1_2:+8974902	Msa0054240:CDS
ATGGAGGAAATATGGTCAAA+AGG	0.485930	1_2:+8973921	Msa0054240:CDS
ACAAGAACCTTATAAGCCTT+AGG	0.486641	1_2:-8973685	None:intergenic
ACATTATCAAGCTTAATGGT+TGG	0.490629	1_2:-8974766	None:intergenic
CATTAATCAAAAGGCCATGT+AGG	0.493040	1_2:+8973650	Msa0054240:CDS
ATACTAGTTGCAACATATGA+AGG	0.494693	1_2:+8974625	Msa0054240:CDS
TAGGGATATTTCCTCACCTA+AGG	0.500791	1_2:+8973669	Msa0054240:CDS
AACTGGGCAGCTTGGAGCAT+AGG	0.506437	1_2:-8973986	None:intergenic
GAGCACCTAAAGTAAGCTCT+AGG	0.538868	1_2:-8973964	None:intergenic
ATTAATCAAAAGGCCATGTA+GGG	0.538909	1_2:+8973651	Msa0054240:CDS
CCTAAAGTAAGCTCTAGGAG+AGG	0.548395	1_2:-8973959	None:intergenic
CTCATAGTTCTCACACATGT+TGG	0.554828	1_2:-8973458	None:intergenic
GTAACATGAACTGAACCTAA+AGG	0.560432	1_2:-8974712	None:intergenic
CTAAAGTAAGCTCTAGGAGA+GGG	0.569732	1_2:-8973958	None:intergenic
GTCTCAGTTCTGAGAACAAG+AGG	0.575865	1_2:+8973419	Msa0054240:CDS
TTTCAGCTTTCTCATGACCA+TGG	0.582497	1_2:-8974657	None:intergenic
GGTATAAAGTATGTGATGGA+TGG	0.592987	1_2:+8973892	Msa0054240:intron
ATGTGATGGATGGATATCAA+TGG	0.593080	1_2:+8973902	Msa0054240:CDS
TTGTGGTATAAAGTATGTGA+TGG	0.595565	1_2:+8973888	Msa0054240:intron
ATGTTGCAACTAGTATAGTA+GGG	0.601976	1_2:-8974618	None:intergenic
TCAATGCACAACATTATACA+TGG	0.615653	1_2:-8974933	None:intergenic
GGTGAGGAAATATCCCTACA+TGG	0.620508	1_2:-8973664	None:intergenic
GTTCTTTGAATAATTTGTTG+AGG	0.631715	1_2:-8974739	None:intergenic
AACCTTATAAGCCTTAGGTG+AGG	0.658225	1_2:-8973680	None:intergenic
TAAAGTAAGCTCTAGGAGAG+GGG	0.664718	1_2:-8973957	None:intergenic
TGATGGATGGATATCAATGG+AGG	0.669535	1_2:+8973905	Msa0054240:CDS
AATTCTTCCAGAAATAGCAG+TGG	0.680346	1_2:-8974872	None:intergenic
TATGAAGGAGAGCACAACCA+TGG	0.694590	1_2:+8974640	Msa0054240:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATATTACAATAATTTAGT+AGG	+	chr1_2:8974137-8974156	Msa0054240:intron	10.0%
!!	TGATTTGAAAAAAAATAATT+CGG	+	chr1_2:8974295-8974314	Msa0054240:intron	10.0%
!!	AAATATTACAATAATTTAGT+AGG	+	chr1_2:8974137-8974156	Msa0054240:intron	10.0%
!!	TGATTTGAAAAAAAATAATT+CGG	+	chr1_2:8974295-8974314	Msa0054240:intron	10.0%
!!	TAATTCAATAATGTTGAAAT+TGG	+	chr1_2:8973224-8973243	Msa0054240:intron	15.0%
!!	TACAAATTCAAAATTAATCA+AGG	-	chr1_2:8973867-8973886	None:intergenic	15.0%
!!!	TAATTTTGAATTTGTATTTG+TGG	+	chr1_2:8973871-8973890	Msa0054240:intron	15.0%
!!!	ATCAAAATTTGATTTTGTTT+GGG	-	chr1_2:8974556-8974575	None:intergenic	15.0%
!!	TAATTCAATAATGTTGAAAT+TGG	+	chr1_2:8973224-8973243	Msa0054240:intron	15.0%
!!	TACAAATTCAAAATTAATCA+AGG	-	chr1_2:8973867-8973886	None:intergenic	15.0%
!!!	TAATTTTGAATTTGTATTTG+TGG	+	chr1_2:8973871-8973890	Msa0054240:intron	15.0%
!!!	ATCAAAATTTGATTTTGTTT+GGG	-	chr1_2:8974556-8974575	None:intergenic	15.0%
!!!	ATGTCATTCTAAGAAATTTA+GGG	-	chr1_2:8973353-8973372	None:intergenic	20.0%
!!!	AATGTCATTCTAAGAAATTT+AGG	-	chr1_2:8973354-8973373	None:intergenic	20.0%
!!	ATGAAGAATCATTAATCAAA+AGG	+	chr1_2:8973641-8973660	Msa0054240:CDS	20.0%
!!!	TTATTACCTTCTTTTTAACT+GGG	-	chr1_2:8974005-8974024	None:intergenic	20.0%
!!!	ATTATTACCTTCTTTTTAAC+TGG	-	chr1_2:8974006-8974025	None:intergenic	20.0%
!!!	AGATGATTTTAAAACTTAGA+AGG	-	chr1_2:8974326-8974345	None:intergenic	20.0%
!!	AGAAACAAAAGTAAAAAGAT+AGG	+	chr1_2:8974426-8974445	Msa0054240:intron	20.0%
!!!	GATCAAAATTTGATTTTGTT+TGG	-	chr1_2:8974557-8974576	None:intergenic	20.0%
!!	CTCTTATGTCATTATTAATT+AGG	+	chr1_2:8974576-8974595	Msa0054240:intron	20.0%
!!	ATTTGTTCTTATTAGAAGTA+TGG	-	chr1_2:8974903-8974922	None:intergenic	20.0%
!!	ATACTTCTAATAAGAACAAA+TGG	+	chr1_2:8974902-8974921	Msa0054240:CDS	20.0%
!!!	ATGTCATTCTAAGAAATTTA+GGG	-	chr1_2:8973353-8973372	None:intergenic	20.0%
!!!	AATGTCATTCTAAGAAATTT+AGG	-	chr1_2:8973354-8973373	None:intergenic	20.0%
!!	ATGAAGAATCATTAATCAAA+AGG	+	chr1_2:8973641-8973660	Msa0054240:CDS	20.0%
!!!	TTATTACCTTCTTTTTAACT+GGG	-	chr1_2:8974005-8974024	None:intergenic	20.0%
!!!	ATTATTACCTTCTTTTTAAC+TGG	-	chr1_2:8974006-8974025	None:intergenic	20.0%
!!!	AGATGATTTTAAAACTTAGA+AGG	-	chr1_2:8974326-8974345	None:intergenic	20.0%
!!	AGAAACAAAAGTAAAAAGAT+AGG	+	chr1_2:8974426-8974445	Msa0054240:intron	20.0%
!!!	GATCAAAATTTGATTTTGTT+TGG	-	chr1_2:8974557-8974576	None:intergenic	20.0%
!!	CTCTTATGTCATTATTAATT+AGG	+	chr1_2:8974576-8974595	Msa0054240:intron	20.0%
!!	ATTTGTTCTTATTAGAAGTA+TGG	-	chr1_2:8974903-8974922	None:intergenic	20.0%
!!	ATACTTCTAATAAGAACAAA+TGG	+	chr1_2:8974902-8974921	Msa0054240:CDS	20.0%
!!	ACATTGAAAATTTTATGTGC+AGG	+	chr1_2:8973369-8973388	Msa0054240:intron	25.0%
!	AATATGTTTGATACTGTTAG+AGG	+	chr1_2:8973577-8973596	Msa0054240:CDS	25.0%
!	CAGTTAATGAAGTAAAATTG+TGG	+	chr1_2:8973821-8973840	Msa0054240:intron	25.0%
!	TTTCGATAGAGATTACTAAT+CGG	-	chr1_2:8974118-8974137	None:intergenic	25.0%
!	AGTCTTTATATGAAAAGATG+TGG	-	chr1_2:8974176-8974195	None:intergenic	25.0%
!	TACTTAGACCAATATATTGT+TGG	+	chr1_2:8974235-8974254	Msa0054240:intron	25.0%
!	CATGTTTACCAACAATATAT+TGG	-	chr1_2:8974246-8974265	None:intergenic	25.0%
!	TCTTGAATCAAAATCATGAA+TGG	-	chr1_2:8974529-8974548	None:intergenic	25.0%
!!!	GTTCTTTGAATAATTTGTTG+AGG	-	chr1_2:8974742-8974761	None:intergenic	25.0%
!!	ACATTGAAAATTTTATGTGC+AGG	+	chr1_2:8973369-8973388	Msa0054240:intron	25.0%
!	AATATGTTTGATACTGTTAG+AGG	+	chr1_2:8973577-8973596	Msa0054240:CDS	25.0%
!	CAGTTAATGAAGTAAAATTG+TGG	+	chr1_2:8973821-8973840	Msa0054240:intron	25.0%
!	TTTCGATAGAGATTACTAAT+CGG	-	chr1_2:8974118-8974137	None:intergenic	25.0%
!	AGTCTTTATATGAAAAGATG+TGG	-	chr1_2:8974176-8974195	None:intergenic	25.0%
!	TACTTAGACCAATATATTGT+TGG	+	chr1_2:8974235-8974254	Msa0054240:intron	25.0%
!	CATGTTTACCAACAATATAT+TGG	-	chr1_2:8974246-8974265	None:intergenic	25.0%
!	TCTTGAATCAAAATCATGAA+TGG	-	chr1_2:8974529-8974548	None:intergenic	25.0%
!!!	GTTCTTTGAATAATTTGTTG+AGG	-	chr1_2:8974742-8974761	None:intergenic	25.0%
	TCTTTCTTGATTGTTGTGTT+TGG	-	chr1_2:8973531-8973550	None:intergenic	30.0%
	ATTAATCAAAAGGCCATGTA+GGG	+	chr1_2:8973651-8973670	Msa0054240:CDS	30.0%
	TTGTGGTATAAAGTATGTGA+TGG	+	chr1_2:8973888-8973907	Msa0054240:intron	30.0%
	TATGAAAAGATGTGGTTGAT+AGG	-	chr1_2:8974168-8974187	None:intergenic	30.0%
	ATGTTGCAACTAGTATAGTA+GGG	-	chr1_2:8974621-8974640	None:intergenic	30.0%
	TATGTTGCAACTAGTATAGT+AGG	-	chr1_2:8974622-8974641	None:intergenic	30.0%
	ATACTAGTTGCAACATATGA+AGG	+	chr1_2:8974625-8974644	Msa0054240:CDS	30.0%
	ACATTATCAAGCTTAATGGT+TGG	-	chr1_2:8974769-8974788	None:intergenic	30.0%
	TGGAACATTATCAAGCTTAA+TGG	-	chr1_2:8974773-8974792	None:intergenic	30.0%
!	AATTGCTGGATAGATGATTT+TGG	-	chr1_2:8974793-8974812	None:intergenic	30.0%
!	ATCATCTATCCAGCAATTTT+TGG	+	chr1_2:8974795-8974814	Msa0054240:CDS	30.0%
	TTTGTTGAACCAAAAATTGC+TGG	-	chr1_2:8974807-8974826	None:intergenic	30.0%
!!!	GCAATTTTTGGTTCAACAAA+TGG	+	chr1_2:8974807-8974826	Msa0054240:CDS	30.0%
!!!	TGCTATTTCTGGAAGAATTT+TGG	+	chr1_2:8974876-8974895	Msa0054240:CDS	30.0%
	TCAATGCACAACATTATACA+TGG	-	chr1_2:8974936-8974955	None:intergenic	30.0%
	TCTTTCTTGATTGTTGTGTT+TGG	-	chr1_2:8973531-8973550	None:intergenic	30.0%
	ATTAATCAAAAGGCCATGTA+GGG	+	chr1_2:8973651-8973670	Msa0054240:CDS	30.0%
	TTGTGGTATAAAGTATGTGA+TGG	+	chr1_2:8973888-8973907	Msa0054240:intron	30.0%
	TATGAAAAGATGTGGTTGAT+AGG	-	chr1_2:8974168-8974187	None:intergenic	30.0%
	ATGTTGCAACTAGTATAGTA+GGG	-	chr1_2:8974621-8974640	None:intergenic	30.0%
	TATGTTGCAACTAGTATAGT+AGG	-	chr1_2:8974622-8974641	None:intergenic	30.0%
	ATACTAGTTGCAACATATGA+AGG	+	chr1_2:8974625-8974644	Msa0054240:CDS	30.0%
	ACATTATCAAGCTTAATGGT+TGG	-	chr1_2:8974769-8974788	None:intergenic	30.0%
	TGGAACATTATCAAGCTTAA+TGG	-	chr1_2:8974773-8974792	None:intergenic	30.0%
!	AATTGCTGGATAGATGATTT+TGG	-	chr1_2:8974793-8974812	None:intergenic	30.0%
!	ATCATCTATCCAGCAATTTT+TGG	+	chr1_2:8974795-8974814	Msa0054240:CDS	30.0%
	TTTGTTGAACCAAAAATTGC+TGG	-	chr1_2:8974807-8974826	None:intergenic	30.0%
!!!	GCAATTTTTGGTTCAACAAA+TGG	+	chr1_2:8974807-8974826	Msa0054240:CDS	30.0%
!!!	TGCTATTTCTGGAAGAATTT+TGG	+	chr1_2:8974876-8974895	Msa0054240:CDS	30.0%
	TCAATGCACAACATTATACA+TGG	-	chr1_2:8974936-8974955	None:intergenic	30.0%
	CATTAATCAAAAGGCCATGT+AGG	+	chr1_2:8973650-8973669	Msa0054240:CDS	35.0%
	ACAAGAACCTTATAAGCCTT+AGG	-	chr1_2:8973688-8973707	None:intergenic	35.0%
!	GGTATAAAGTATGTGATGGA+TGG	+	chr1_2:8973892-8973911	Msa0054240:intron	35.0%
!!	ATGTGATGGATGGATATCAA+TGG	+	chr1_2:8973902-8973921	Msa0054240:CDS	35.0%
	GGATATCAATGGAGGAAATA+TGG	+	chr1_2:8973913-8973932	Msa0054240:CDS	35.0%
	ATGGAGGAAATATGGTCAAA+AGG	+	chr1_2:8973921-8973940	Msa0054240:CDS	35.0%
	AGATTACTAATCGGTGAAGT+AGG	-	chr1_2:8974109-8974128	None:intergenic	35.0%
	GTAACATGAACTGAACCTAA+AGG	-	chr1_2:8974715-8974734	None:intergenic	35.0%
	AATTCTTCCAGAAATAGCAG+TGG	-	chr1_2:8974875-8974894	None:intergenic	35.0%
	CATTAATCAAAAGGCCATGT+AGG	+	chr1_2:8973650-8973669	Msa0054240:CDS	35.0%
	ACAAGAACCTTATAAGCCTT+AGG	-	chr1_2:8973688-8973707	None:intergenic	35.0%
!	GGTATAAAGTATGTGATGGA+TGG	+	chr1_2:8973892-8973911	Msa0054240:intron	35.0%
!!	ATGTGATGGATGGATATCAA+TGG	+	chr1_2:8973902-8973921	Msa0054240:CDS	35.0%
	GGATATCAATGGAGGAAATA+TGG	+	chr1_2:8973913-8973932	Msa0054240:CDS	35.0%
	ATGGAGGAAATATGGTCAAA+AGG	+	chr1_2:8973921-8973940	Msa0054240:CDS	35.0%
	AGATTACTAATCGGTGAAGT+AGG	-	chr1_2:8974109-8974128	None:intergenic	35.0%
	GTAACATGAACTGAACCTAA+AGG	-	chr1_2:8974715-8974734	None:intergenic	35.0%
	AATTCTTCCAGAAATAGCAG+TGG	-	chr1_2:8974875-8974894	None:intergenic	35.0%
!	TTATGTGCAGGACGAAGTTT+TGG	+	chr1_2:8973381-8973400	Msa0054240:intron	40.0%
	CTCATAGTTCTCACACATGT+TGG	-	chr1_2:8973461-8973480	None:intergenic	40.0%
	TAGGGATATTTCCTCACCTA+AGG	+	chr1_2:8973669-8973688	Msa0054240:CDS	40.0%
	TTCCTCACCTAAGGCTTATA+AGG	+	chr1_2:8973678-8973697	Msa0054240:CDS	40.0%
	AACCTTATAAGCCTTAGGTG+AGG	-	chr1_2:8973683-8973702	None:intergenic	40.0%
!	TGATGGATGGATATCAATGG+AGG	+	chr1_2:8973905-8973924	Msa0054240:CDS	40.0%
!!	TAAAGTAAGCTCTAGGAGAG+GGG	-	chr1_2:8973960-8973979	None:intergenic	40.0%
!!	CTAAAGTAAGCTCTAGGAGA+GGG	-	chr1_2:8973961-8973980	None:intergenic	40.0%
!!	TTCTTTTTAACTGGGCAGCT+TGG	-	chr1_2:8973997-8974016	None:intergenic	40.0%
	AAGCTGCCCAGTTAAAAAGA+AGG	+	chr1_2:8973996-8974015	Msa0054240:CDS	40.0%
	TTACTAATCGGTGAAGTAGG+TGG	-	chr1_2:8974106-8974125	None:intergenic	40.0%
	TTTCAGCTTTCTCATGACCA+TGG	-	chr1_2:8974660-8974679	None:intergenic	40.0%
	CTAAAGGAGCTTCTTCACTT+TGG	-	chr1_2:8974699-8974718	None:intergenic	40.0%
	CAAAGTGAAGAAGCTCCTTT+AGG	+	chr1_2:8974697-8974716	Msa0054240:CDS	40.0%
!	GCAAGTGCTGTAGTGAAATT+AGG	-	chr1_2:8974853-8974872	None:intergenic	40.0%
!	TTATGTGCAGGACGAAGTTT+TGG	+	chr1_2:8973381-8973400	Msa0054240:intron	40.0%
	CTCATAGTTCTCACACATGT+TGG	-	chr1_2:8973461-8973480	None:intergenic	40.0%
	TAGGGATATTTCCTCACCTA+AGG	+	chr1_2:8973669-8973688	Msa0054240:CDS	40.0%
	TTCCTCACCTAAGGCTTATA+AGG	+	chr1_2:8973678-8973697	Msa0054240:CDS	40.0%
	AACCTTATAAGCCTTAGGTG+AGG	-	chr1_2:8973683-8973702	None:intergenic	40.0%
!	TGATGGATGGATATCAATGG+AGG	+	chr1_2:8973905-8973924	Msa0054240:CDS	40.0%
!!	TAAAGTAAGCTCTAGGAGAG+GGG	-	chr1_2:8973960-8973979	None:intergenic	40.0%
!!	CTAAAGTAAGCTCTAGGAGA+GGG	-	chr1_2:8973961-8973980	None:intergenic	40.0%
!!	TTCTTTTTAACTGGGCAGCT+TGG	-	chr1_2:8973997-8974016	None:intergenic	40.0%
	AAGCTGCCCAGTTAAAAAGA+AGG	+	chr1_2:8973996-8974015	Msa0054240:CDS	40.0%
	TTACTAATCGGTGAAGTAGG+TGG	-	chr1_2:8974106-8974125	None:intergenic	40.0%
	TTTCAGCTTTCTCATGACCA+TGG	-	chr1_2:8974660-8974679	None:intergenic	40.0%
	CTAAAGGAGCTTCTTCACTT+TGG	-	chr1_2:8974699-8974718	None:intergenic	40.0%
	CAAAGTGAAGAAGCTCCTTT+AGG	+	chr1_2:8974697-8974716	Msa0054240:CDS	40.0%
!	GCAAGTGCTGTAGTGAAATT+AGG	-	chr1_2:8974853-8974872	None:intergenic	40.0%
!!	GTCTCAGTTCTGAGAACAAG+AGG	+	chr1_2:8973419-8973438	Msa0054240:CDS	45.0%
	GGTGAGGAAATATCCCTACA+TGG	-	chr1_2:8973667-8973686	None:intergenic	45.0%
!!	CCTAAAGTAAGCTCTAGGAG+AGG	-	chr1_2:8973962-8973981	None:intergenic	45.0%
	CCTCTCCTAGAGCTTACTTT+AGG	+	chr1_2:8973959-8973978	Msa0054240:CDS	45.0%
	GAGCACCTAAAGTAAGCTCT+AGG	-	chr1_2:8973967-8973986	None:intergenic	45.0%
!	TATGAAGGAGAGCACAACCA+TGG	+	chr1_2:8974640-8974659	Msa0054240:CDS	45.0%
!!	GTCTCAGTTCTGAGAACAAG+AGG	+	chr1_2:8973419-8973438	Msa0054240:CDS	45.0%
	GGTGAGGAAATATCCCTACA+TGG	-	chr1_2:8973667-8973686	None:intergenic	45.0%
!!	CCTAAAGTAAGCTCTAGGAG+AGG	-	chr1_2:8973962-8973981	None:intergenic	45.0%
	CCTCTCCTAGAGCTTACTTT+AGG	+	chr1_2:8973959-8973978	Msa0054240:CDS	45.0%
	GAGCACCTAAAGTAAGCTCT+AGG	-	chr1_2:8973967-8973986	None:intergenic	45.0%
!	TATGAAGGAGAGCACAACCA+TGG	+	chr1_2:8974640-8974659	Msa0054240:CDS	45.0%
!!	GCACTTGCCACTGCTATTTC+TGG	+	chr1_2:8974865-8974884	Msa0054240:CDS	50.0%
!!	GCACTTGCCACTGCTATTTC+TGG	+	chr1_2:8974865-8974884	Msa0054240:CDS	50.0%
	AACTGGGCAGCTTGGAGCAT+AGG	-	chr1_2:8973989-8974008	None:intergenic	55.0%
	AACTGGGCAGCTTGGAGCAT+AGG	-	chr1_2:8973989-8974008	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	8973220	8975080	8973220	ID=Msa0054240;Name=Msa0054240
chr1_2	mRNA	8973220	8975080	8973220	ID=Msa0054240-mRNA-1;Parent=Msa0054240;Name=Msa0054240-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0\|0.66\|0.5\|0.75\|1\|1\|4\|153\|264
chr1_2	exon	8973220	8973222	8973220	ID=Msa0054240-mRNA-1:exon:3203;Parent=Msa0054240-mRNA-1
chr1_2	exon	8973391	8973735	8973391	ID=Msa0054240-mRNA-1:exon:3204;Parent=Msa0054240-mRNA-1
chr1_2	exon	8973901	8974017	8973901	ID=Msa0054240-mRNA-1:exon:3205;Parent=Msa0054240-mRNA-1
chr1_2	exon	8974598	8975080	8974598	ID=Msa0054240-mRNA-1:exon:3206;Parent=Msa0054240-mRNA-1
chr1_2	CDS	8973220	8973222	8973220	ID=Msa0054240-mRNA-1:cds;Parent=Msa0054240-mRNA-1
chr1_2	CDS	8973391	8973735	8973391	ID=Msa0054240-mRNA-1:cds;Parent=Msa0054240-mRNA-1
chr1_2	CDS	8973901	8974017	8973901	ID=Msa0054240-mRNA-1:cds;Parent=Msa0054240-mRNA-1
chr1_2	CDS	8974598	8974927	8974598	ID=Msa0054240-mRNA-1:cds;Parent=Msa0054240-mRNA-1
chr1_2	three_prime_UTR	8974928	8975080	8974928	ID=Msa0054240-mRNA-1:three_prime_utr;Parent=Msa0054240-mRNA-1

Gene Sequence

>Msa0054240

ATGGACGAAGTTTTGGTTGAAGAGTTACATCGTCTCAGTTCTGAGAACAAGAGGCTAAATGAAACATTGACCAACATGTGTGAGAACTATGAGACTATGCAAAAGCAATTGAATCAATTGATGAATCAAAATTTTGAACACCAAACACAACAATCAAGAAAGAGAAAAGCTGAGAGTGAAAGTTGCATCAATATGTTTGATACTGTTAGAGGCATTAATATTATCAATAATAATGAGTGCAGCACTGTTACTGATGAAGAATCATTAATCAAAAGGCCATGTAGGGATATTTCCTCACCTAAGGCTTATAAGGTTCTTGTGAAGACAGAAGCATCTAGTAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTTACTAGAGATAACCCCTCTCCTAGAGCTTACTTTAGGTGCTCCTATGCTCCAAGCTGCCCAGTTAAAAAGAAGGTGCAAAAAAGTTTAGAAGACCCTACTATACTAGTTGCAACATATGAAGGAGAGCACAACCATGGTCATGAGAAAGCTGAAATATCAATGATATCAAGCCAAAGTGAAGAAGCTCCTTTAGGTTCAGTTCATGTTACTTCACCTCAACAAATTATTCAAAGAACATGTCCAACCATTAAGCTTGATAATGTTCCAAAATCATCTATCCAGCAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAATGATCCTAATTTCACTACAGCACTTGCCACTGCTATTTCTGGAAGAATTTTGGACCATACTTCTAATAAGAACAAATGGTGA

Protein sequence

>Msa0054240

MDEVLVEELHRLSSENKRLNETLTNMCENYETMQKQLNQLMNQNFEHQTQQSRKRKAESESCINMFDTVRGINIINNNECSTVTDEESLIKRPCRDISSPKAYKVLVKTEASSNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSYAPSCPVKKKVQKSLEDPTILVATYEGEHNHGHEKAEISMISSQSEEAPLGSVHVTSPQQIIQRTCPTIKLDNVPKSSIQQFLVQQMATSLTNDPNFTTALATAISGRILDHTSNKNKW*